Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1047150 | XP_013447820.1 | 95.225 | 377 | 10 | 3 | 1 | 376 | 1 | 370 | 0.0 | 702 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1047150 | sp|Q84L30|RD23D_ARATH | 67.016 | 382 | 115 | 7 | 1 | 376 | 1 | 377 | 2.41e-161 | 460 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1047150 | A0A072TVG7 | 95.225 | 377 | 10 | 3 | 1 | 376 | 1 | 370 | 0.0 | 702 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0038350 | Msa1047150 | 0.821790 | 3.347386e-53 | -8.615850e-47 |
| Msa0039420 | Msa1047150 | 0.806869 | 6.671358e-50 | -8.615850e-47 |
| Msa0657670 | Msa1047150 | -0.808134 | 3.595547e-50 | -8.615850e-47 |
| Msa0185640 | Msa1047150 | 0.814175 | 1.761252e-51 | -8.615850e-47 |
| Msa0200950 | Msa1047150 | 0.820151 | 7.980590e-53 | -8.615850e-47 |
| Msa0467900 | Msa1047150 | 0.808286 | 3.337549e-50 | -8.615850e-47 |
| Msa1004900 | Msa1047150 | 0.847628 | 1.025353e-59 | -8.615850e-47 |
| Msa1036390 | Msa1047150 | -0.809391 | 1.936489e-50 | -8.615850e-47 |
| Msa1047150 | Msa1076680 | -0.814359 | 1.604208e-51 | -8.615850e-47 |
| Msa1047150 | Msa1128160 | -0.809322 | 2.003517e-50 | -8.615850e-47 |
| Msa1047150 | Msa1139000 | 0.800160 | 1.642006e-48 | -8.615850e-47 |
| Msa1047150 | Msa1162550 | 0.812928 | 3.311925e-51 | -8.615850e-47 |
| Msa1047150 | Msa1165360 | -0.811808 | 5.815871e-51 | -8.615850e-47 |
| Msa1047150 | Msa1170040 | 0.808357 | 3.222964e-50 | -8.615850e-47 |
| Msa1047150 | Msa1186570 | -0.802292 | 6.012915e-49 | -8.615850e-47 |
| Msa1047150 | Msa1204980 | 0.810237 | 1.273547e-50 | -8.615850e-47 |
| Msa1047150 | Msa1205010 | 0.813707 | 2.233467e-51 | -8.615850e-47 |
| Msa1047150 | Msa1256540 | 0.812745 | 3.631427e-51 | -8.615850e-47 |
| Msa1047150 | Msa1296960 | 0.815307 | 9.884997e-52 | -8.615850e-47 |
| Msa1047150 | Msa1390120 | -0.800909 | 1.155000e-48 | -8.615850e-47 |
| Msa1047150 | Msa1395230 | 0.816163 | 6.371336e-52 | -8.615850e-47 |
| Msa1047150 | Msa1395530 | -0.803430 | 3.499495e-49 | -8.615850e-47 |
| Msa0258670 | Msa1047150 | 0.818198 | 2.221104e-52 | -8.615850e-47 |
| Msa0312690 | Msa1047150 | 0.806948 | 6.420507e-50 | -8.615850e-47 |
| Msa0342340 | Msa1047150 | 0.814251 | 1.694859e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1047150 | MtrunA17_Chr7g0214981 | 95.225 | 377 | 10 | 3 | 1 | 376 | 1 | 370 | 0.0 | 702 |
| Msa1047150 | MtrunA17_Chr1g0209971 | 64.750 | 400 | 113 | 6 | 1 | 376 | 1 | 396 | 3.41e-166 | 470 |
| Msa1047150 | MtrunA17_Chr2g0334051 | 55.556 | 378 | 154 | 5 | 1 | 376 | 1 | 366 | 1.88e-130 | 378 |
| Msa1047150 | MtrunA17_Chr1g0146801 | 60.714 | 84 | 32 | 1 | 1 | 83 | 1 | 84 | 1.24e-25 | 100 |
| Msa1047150 | MtrunA17_Chr7g0226581 | 60.526 | 76 | 30 | 0 | 1 | 76 | 205 | 280 | 3.35e-24 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1047150 | AT5G38470.1 | 67.016 | 382 | 115 | 7 | 1 | 376 | 1 | 377 | 2.45e-162 | 460 |
| Msa1047150 | AT3G02540.3 | 59.633 | 436 | 98 | 10 | 1 | 376 | 1 | 418 | 1.33e-161 | 459 |
| Msa1047150 | AT3G02540.1 | 60.859 | 419 | 121 | 8 | 1 | 376 | 1 | 419 | 2.83e-161 | 459 |
| Msa1047150 | AT1G79650.2 | 55.497 | 382 | 147 | 7 | 1 | 376 | 1 | 365 | 1.30e-133 | 387 |
| Msa1047150 | AT1G79650.1 | 54.522 | 387 | 149 | 7 | 1 | 376 | 1 | 371 | 6.56e-133 | 385 |
| Msa1047150 | AT1G79650.4 | 53.117 | 401 | 157 | 8 | 1 | 376 | 1 | 395 | 3.87e-131 | 381 |
| Msa1047150 | AT1G16190.1 | 50.758 | 396 | 147 | 6 | 1 | 376 | 1 | 368 | 3.78e-127 | 370 |
| Msa1047150 | AT5G38470.2 | 64.526 | 327 | 104 | 7 | 1 | 320 | 1 | 322 | 1.47e-124 | 362 |
| Msa1047150 | AT1G16190.2 | 50.135 | 371 | 137 | 6 | 26 | 376 | 3 | 345 | 4.34e-115 | 338 |
| Msa1047150 | AT1G79650.3 | 50.129 | 387 | 146 | 8 | 1 | 376 | 1 | 351 | 8.75e-115 | 338 |
| Msa1047150 | AT3G02540.2 | 56.187 | 299 | 94 | 5 | 1 | 262 | 1 | 299 | 1.14e-93 | 282 |
| Msa1047150 | AT5G16090.1 | 56.579 | 76 | 33 | 0 | 1 | 76 | 1 | 76 | 1.20e-21 | 91.3 |
| Msa1047150 | AT5G16090.1 | 45.833 | 96 | 52 | 0 | 275 | 370 | 74 | 169 | 3.02e-18 | 82.0 |
Find 128 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATGGCCTCGTTCTCTTC+TGG | 0.133988 | 7_2:+7861051 | None:intergenic |
| ACTAATCATCAAACTCATTT+TGG | 0.167094 | 7_2:+7860606 | None:intergenic |
| TAATCAGGGCATTCCCAATT+TGG | 0.173680 | 7_2:-7861836 | Msa1047150:intron |
| TGCTGGAGCTTCAGCTTGTT+CGG | 0.253567 | 7_2:+7862055 | None:intergenic |
| TTCTTTGCAGCCCATGCTTC+AGG | 0.263564 | 7_2:-7861561 | Msa1047150:intron |
| GAATGGCCTCGTTCTCTTCT+GGG | 0.275717 | 7_2:+7861052 | None:intergenic |
| TAGATATTCAACAGCTCTTT+CGG | 0.288694 | 7_2:+7862606 | None:intergenic |
| TGTTTGTGTCCTAAACTCTT+TGG | 0.298373 | 7_2:-7860515 | Msa1047150:three_prime_UTR |
| GCTGGAGCTTCAGCTTGTTC+GGG | 0.312279 | 7_2:+7862056 | None:intergenic |
| AGAGGGACAGTTGGGTGCTT+TGG | 0.326637 | 7_2:-7861097 | Msa1047150:CDS |
| AGATATTCAACAGCTCTTTC+GGG | 0.333255 | 7_2:+7862607 | None:intergenic |
| TATCCAACAAATTCTAGAAA+TGG | 0.339571 | 7_2:-7862689 | Msa1047150:CDS |
| TGGATGAGTTCCATTAGGTT+TGG | 0.345262 | 7_2:+7861521 | None:intergenic |
| AACCAGCTGTGCCTGCTGTT+GGG | 0.345512 | 7_2:-7861974 | Msa1047150:CDS |
| TCTAGAATTTGTTGGATAGT+TGG | 0.348951 | 7_2:+7862694 | None:intergenic |
| ATCCAACAAATTCTAGAAAT+GGG | 0.348997 | 7_2:-7862688 | Msa1047150:CDS |
| AAGTTCAGTGGGTTGGTGTT+AGG | 0.351972 | 7_2:+7861951 | None:intergenic |
| CAACCAGCTGTGCCTGCTGT+TGG | 0.357460 | 7_2:-7861975 | Msa1047150:CDS |
| AGGCAAAGAACTTGCAGGTT+GGG | 0.363767 | 7_2:+7863156 | None:intergenic |
| AATCAGGGCATTCCCAATTT+GGG | 0.364424 | 7_2:-7861835 | Msa1047150:intron |
| AACAGCAGGCACAGCTGGTT+GGG | 0.370179 | 7_2:+7861977 | None:intergenic |
| GCTCTTGGATGAGTTCCATT+AGG | 0.373949 | 7_2:+7861516 | None:intergenic |
| ATCACTTCTCCAAAGAGTTT+AGG | 0.374572 | 7_2:+7860506 | None:intergenic |
| TACAAGACCTTGCGCAAGAT+TGG | 0.377380 | 7_2:+7862990 | None:intergenic |
| GCAGGCACAGCTGGTTGGGC+TGG | 0.386308 | 7_2:+7861981 | None:intergenic |
| GCTGAATCTAATCTCATTGC+TGG | 0.395901 | 7_2:-7862730 | Msa1047150:CDS |
| CAGCCCATGCTTCAGGAACT+AGG | 0.397520 | 7_2:-7861554 | Msa1047150:CDS |
| TGTCGTGATCATGTTGTCTA+AGG | 0.399055 | 7_2:-7864357 | Msa1047150:intron |
| AACCAAGCTGAGAAGATTGC+GGG | 0.400142 | 7_2:-7860315 | None:intergenic |
| TCATCAAGGAAAAGTGCTTA+AGG | 0.402026 | 7_2:-7864423 | Msa1047150:CDS |
| GCACCATTGTTCTCAAGGCT+TGG | 0.405554 | 7_2:+7861674 | None:intergenic |
| TGGGCTGGAGCCTGAGCTGA+AGG | 0.406159 | 7_2:+7861996 | None:intergenic |
| AATAACTGTAAATAAATCTA+TGG | 0.407852 | 7_2:+7860401 | None:intergenic |
| AAAACAAAATCCAAACCTAA+TGG | 0.410836 | 7_2:-7861531 | Msa1047150:CDS |
| GATTAACGTGAAGACTCTTA+AGG | 0.418379 | 7_2:-7865506 | Msa1047150:CDS |
| TGCTTGCACCATTGTTCTCA+AGG | 0.420679 | 7_2:+7861669 | None:intergenic |
| TCTGGCAGCCAACTACCTAT+TGG | 0.424230 | 7_2:-7860633 | Msa1047150:CDS |
| CAATTCTAATTTCTAGTCAA+TGG | 0.433095 | 7_2:+7860436 | None:intergenic |
| GAAACTTCACAGCAGAACTT+TGG | 0.435391 | 7_2:+7865621 | None:intergenic |
| ATGGTGATTTACAGATACTT+TGG | 0.436103 | 7_2:+7860455 | None:intergenic |
| AGAAGTCAGCTTGATGCTCT+TGG | 0.439778 | 7_2:+7861501 | None:intergenic |
| AGCAAACCCTCAAATCTTGC+AGG | 0.441602 | 7_2:-7861650 | Msa1047150:intron |
| TTCTTCCTGCCCAACATTGG+TGG | 0.442898 | 7_2:+7862022 | None:intergenic |
| ACTAGAAATTAGAATTGTGT+TGG | 0.448282 | 7_2:-7860430 | Msa1047150:three_prime_UTR |
| GGCCCAACAGCAGGCACAGC+TGG | 0.453907 | 7_2:+7861972 | None:intergenic |
| CCGTATCTTGAGCGTTCACT+TGG | 0.457398 | 7_2:+7865467 | None:intergenic |
| ATTAACGTGAAGACTCTTAA+GGG | 0.458211 | 7_2:-7865505 | Msa1047150:CDS |
| ATGATACCTGCAAGATTTGA+GGG | 0.458359 | 7_2:+7861644 | None:intergenic |
| TTGGTGATCCAATAGGTAGT+TGG | 0.464218 | 7_2:+7860625 | None:intergenic |
| ATAAGCATTTGTTGTGCAGC+AGG | 0.465256 | 7_2:+7864446 | None:intergenic |
| CACCGCGCACACGGTGGAGG+AGG | 0.470373 | 7_2:+7865561 | None:intergenic |
| GATGATACCTGCAAGATTTG+AGG | 0.473748 | 7_2:+7861643 | None:intergenic |
| TGCTGCTTCAGCTGCCCCAC+CGG | 0.476716 | 7_2:-7863482 | Msa1047150:intron |
| TTGGTGGATGCAGCAACTGC+TGG | 0.482507 | 7_2:+7862038 | None:intergenic |
| AACCCGCAATCTTCTCAGCT+TGG | 0.482634 | 7_2:+7860313 | None:intergenic |
| AGAGAACGAGGCCATTCAAC+GGG | 0.484161 | 7_2:-7861046 | Msa1047150:intron |
| TTTCCTAGTTCCTGAAGCAT+GGG | 0.485024 | 7_2:+7861551 | None:intergenic |
| TTGCTGCATCCACCAATGTT+GGG | 0.488460 | 7_2:-7862031 | Msa1047150:CDS |
| TAATCTTACTCTTCGCCTCC+AGG | 0.493950 | 7_2:+7861461 | None:intergenic |
| CAACAGCAGGCACAGCTGGT+TGG | 0.493994 | 7_2:+7861976 | None:intergenic |
| GGAAGAAAACCCTTCAGCTC+AGG | 0.494609 | 7_2:-7862006 | Msa1047150:CDS |
| GAGGCAAAGAACTTGCAGGT+TGG | 0.500324 | 7_2:+7863155 | None:intergenic |
| TTACGTCTTATAAATGAGCC+TGG | 0.509014 | 7_2:-7861479 | Msa1047150:CDS |
| TCAGCTTGGCCATATGTGTC+AGG | 0.511064 | 7_2:+7862748 | None:intergenic |
| TGCATCCACCAATGTTGGGC+AGG | 0.512054 | 7_2:-7862027 | Msa1047150:CDS |
| GGGCTGGAGCCTGAGCTGAA+GGG | 0.512419 | 7_2:+7861997 | None:intergenic |
| CCCCTCCTCCACCGTGTGCG+CGG | 0.514081 | 7_2:-7865563 | Msa1047150:five_prime_UTR |
| GTTGCTGCATCCACCAATGT+TGG | 0.517414 | 7_2:-7862032 | Msa1047150:CDS |
| CTAGAAATTAGAATTGTGTT+GGG | 0.517572 | 7_2:-7860429 | Msa1047150:three_prime_UTR |
| CCCACTGAACTTGTTCCCTC+AGG | 0.518809 | 7_2:-7861940 | Msa1047150:intron |
| ATTTCTGCGAAACAGTCAAC+AGG | 0.524257 | 7_2:-7861785 | Msa1047150:intron |
| GCTGATGAGGTGTTGACGAA+GGG | 0.527355 | 7_2:+7863131 | None:intergenic |
| CTCTTCTGGGGTGATAGTAA+TGG | 0.530516 | 7_2:+7861065 | None:intergenic |
| CAACAAATGCTTATTCATCA+AGG | 0.532343 | 7_2:-7864437 | Msa1047150:CDS |
| AAATTAGAATTGTGTTGGGA+TGG | 0.534851 | 7_2:-7860425 | Msa1047150:three_prime_UTR |
| TCACTAGCTTACCCGTTGAA+TGG | 0.535651 | 7_2:+7861035 | None:intergenic |
| AGGAACCTAGAGGGACAGTT+GGG | 0.536808 | 7_2:-7861105 | Msa1047150:CDS |
| ATGTCAGATGCTTACGTAGT+GGG | 0.537334 | 7_2:+7862961 | None:intergenic |
| TACTGTCCGACAGTTGATGC+AGG | 0.540212 | 7_2:+7863106 | None:intergenic |
| CGACCGAGATCTTGTGTTGG+AGG | 0.543876 | 7_2:-7860684 | Msa1047150:CDS |
| AATGGCCTCGTTCTCTTCTG+GGG | 0.544654 | 7_2:+7861053 | None:intergenic |
| CCAAGTGAACGCTCAAGATA+CGG | 0.549415 | 7_2:-7865467 | Msa1047150:intron |
| AAATGAAAATGCAGGTGACT+TGG | 0.550169 | 7_2:-7861809 | Msa1047150:CDS |
| ACCGCGCACACGGTGGAGGA+GGG | 0.551093 | 7_2:+7865562 | None:intergenic |
| CAATGAGATTAGATTCAGCT+TGG | 0.553063 | 7_2:+7862734 | None:intergenic |
| CAGGAACCTAGAGGGACAGT+TGG | 0.559902 | 7_2:-7861106 | Msa1047150:CDS |
| GGCTGATGAGGTGTTGACGA+AGG | 0.564475 | 7_2:+7863130 | None:intergenic |
| TGGGGCAGCTGAAGCAGCAG+AGG | 0.565661 | 7_2:+7863486 | None:intergenic |
| AAGCACCCAACTGTCCCTCT+AGG | 0.566429 | 7_2:+7861100 | None:intergenic |
| TCCAACAAATTCTAGAAATG+GGG | 0.567601 | 7_2:-7862687 | Msa1047150:CDS |
| GCTTAAGGATGAGACTACCT+TGG | 0.575347 | 7_2:-7864408 | Msa1047150:CDS |
| TTGGTGTTAGGCCCAACAGC+AGG | 0.576242 | 7_2:+7861963 | None:intergenic |
| AGGGAACAAGTTCAGTGGGT+TGG | 0.582012 | 7_2:+7861944 | None:intergenic |
| TTTGGCAGCTTGAGGATATG+GGG | 0.582461 | 7_2:-7860709 | Msa1047150:intron |
| CAGAATAAGGTATCATCAAG+TGG | 0.584643 | 7_2:-7863511 | Msa1047150:CDS |
| CAGCCTCCTGCATCAACTGT+CGG | 0.594527 | 7_2:-7863112 | Msa1047150:CDS |
| CCGCGCACACGGTGGAGGAG+GGG | 0.598059 | 7_2:+7865563 | None:intergenic |
| TATATGCAGCACGAAGAGCT+CGG | 0.599886 | 7_2:+7862635 | None:intergenic |
| TAAGCATTTGTTGTGCAGCA+GGG | 0.603329 | 7_2:+7864447 | None:intergenic |
| CCAACAAATTCTAGAAATGG+GGG | 0.603400 | 7_2:-7862686 | Msa1047150:CDS |
| CTGGAGCTTCAGCTTGTTCG+GGG | 0.603945 | 7_2:+7862057 | None:intergenic |
| GAATTGTATATTTCAGTGCG+TGG | 0.614207 | 7_2:-7860375 | Msa1047150:three_prime_UTR |
| ACACCTCCAACACAAGATCT+CGG | 0.615119 | 7_2:+7860681 | None:intergenic |
| AGTGTGGTGCCTGACACATA+TGG | 0.615190 | 7_2:-7862757 | Msa1047150:CDS |
| AAGAGAACGAGGCCATTCAA+CGG | 0.619236 | 7_2:-7861047 | Msa1047150:CDS |
| GTTCGACCGAGATCTTGTGT+TGG | 0.621206 | 7_2:-7860687 | Msa1047150:CDS |
| AGAAATCACCACCGCGCACA+CGG | 0.622074 | 7_2:+7865552 | None:intergenic |
| GGAGAATCCAATCTTGCGCA+AGG | 0.622771 | 7_2:-7862997 | Msa1047150:CDS |
| ACCTGAGGGAACAAGTTCAG+TGG | 0.626835 | 7_2:+7861939 | None:intergenic |
| CCTGAGGGAACAAGTTCAGT+GGG | 0.627488 | 7_2:+7861940 | None:intergenic |
| CTCCTCCACCGTGTGCGCGG+TGG | 0.629121 | 7_2:-7865560 | Msa1047150:five_prime_UTR |
| TAACCAAGCTGAGAAGATTG+CGG | 0.629188 | 7_2:-7860316 | Msa1047150:three_prime_UTR |
| GTTGATGCAGGAGGCTGATG+AGG | 0.631490 | 7_2:+7863118 | None:intergenic |
| TTGGGTGCAAATGAAAATGC+AGG | 0.634420 | 7_2:-7861817 | Msa1047150:CDS |
| CTGATGAGGTGTTGACGAAG+GGG | 0.636939 | 7_2:+7863132 | None:intergenic |
| AAAATTTGTACTTACCGGTG+GGG | 0.638126 | 7_2:+7863468 | None:intergenic |
| GTTCCAAGCCTTGAGAACAA+TGG | 0.641500 | 7_2:-7861677 | Msa1047150:CDS |
| TGTATGACCAGGAACCTAGA+GGG | 0.644106 | 7_2:-7861114 | Msa1047150:intron |
| TGATGAGGTGTTGACGAAGG+GGG | 0.645377 | 7_2:+7863133 | None:intergenic |
| GCGCGGTGGTGATTTCTGAT+CGG | 0.654664 | 7_2:-7865546 | Msa1047150:five_prime_UTR |
| TCAGATGCTTACGTAGTGGG+AGG | 0.672680 | 7_2:+7862964 | None:intergenic |
| GGGGTGATAGTAATGGTCTG+AGG | 0.673723 | 7_2:+7861072 | None:intergenic |
| CAACAAATTCTAGAAATGGG+GGG | 0.675087 | 7_2:-7862685 | Msa1047150:CDS |
| TGTCCGACAGTTGATGCAGG+AGG | 0.687879 | 7_2:+7863109 | None:intergenic |
| AATCACCACCGCGCACACGG+TGG | 0.697495 | 7_2:+7865555 | None:intergenic |
| TTGTATGACCAGGAACCTAG+AGG | 0.704847 | 7_2:-7861115 | Msa1047150:intron |
| CGTCTTATAAATGAGCCTGG+AGG | 0.725357 | 7_2:-7861476 | Msa1047150:CDS |
| TATCACCCCAGAAGAGAACG+AGG | 0.729383 | 7_2:-7861058 | Msa1047150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAATAATTCAATTTTTTTTT+AGG | - | chr7_2:7860525-7860544 | Msa1047150:three_prime_UTR | 10.0% |
| !! | CAATAAAATTTAAACAATAA+TGG | - | chr7_2:7864059-7864078 | Msa1047150:intron | 10.0% |
| !!! | TTTTTTTGTTTTTTTTAATC+AGG | - | chr7_2:7864096-7864115 | Msa1047150:intron | 10.0% |
| !!! | TTTTTTGTTTTTTTTAATCA+GGG | - | chr7_2:7864097-7864116 | Msa1047150:intron | 10.0% |
| !! | ATAAATAATGAAAACTAATA+TGG | + | chr7_2:7864223-7864242 | None:intergenic | 10.0% |
| !! | TATGATATAGAAAAAATGAT+TGG | + | chr7_2:7862028-7862047 | None:intergenic | 15.0% |
| !!! | ATTGTATTATCTTTTAAGAT+CGG | + | chr7_2:7863609-7863628 | None:intergenic | 15.0% |
| !! | AAAGATAATACAATGAATAA+CGG | - | chr7_2:7863615-7863634 | Msa1047150:intron | 15.0% |
| !!! | ATTTGAATAACTATATCTTT+TGG | + | chr7_2:7864596-7864615 | None:intergenic | 15.0% |
| !! | AATAAACCATATATTAATCT+AGG | - | chr7_2:7864752-7864771 | Msa1047150:intron | 15.0% |
| !! | ATAAACCATATATTAATCTA+GGG | - | chr7_2:7864753-7864772 | Msa1047150:intron | 15.0% |
| !!! | TTATTACTTTTTGTTGTTTT+CGG | - | chr7_2:7865466-7865485 | Msa1047150:intron | 15.0% |
| !! | AATAACTGTAAATAAATCTA+TGG | + | chr7_2:7865549-7865568 | None:intergenic | 15.0% |
| !!! | CTTAATATTTTTTTATTTCG+TGG | - | chr7_2:7865601-7865620 | Msa1047150:five_prime_UTR | 15.0% |
| !! | TTGGTTGAAATAAATTGTTT+CGG | - | chr7_2:7860604-7860623 | Msa1047150:exon | 20.0% |
| !!! | TTTGAATGTTAAGTTGTTTA+TGG | - | chr7_2:7861088-7861107 | Msa1047150:CDS | 20.0% |
| !!! | GATGATGTTATTTTAATGAT+TGG | - | chr7_2:7861629-7861648 | Msa1047150:intron | 20.0% |
| !!! | AGTATTTAAGTTAATTCAGT+TGG | - | chr7_2:7861688-7861707 | Msa1047150:intron | 20.0% |
| !!! | GTATTTAAGTTAATTCAGTT+GGG | - | chr7_2:7861689-7861708 | Msa1047150:intron | 20.0% |
| !!! | TATTTAAGTTAATTCAGTTG+GGG | - | chr7_2:7861690-7861709 | Msa1047150:intron | 20.0% |
| !!! | ACCTTTAATTCAATTTTTTG+TGG | - | chr7_2:7861852-7861871 | Msa1047150:intron | 20.0% |
| !! | TCCACAAAAAATTGAATTAA+AGG | + | chr7_2:7861856-7861875 | None:intergenic | 20.0% |
| !!! | TTTTTGATGTTTAAATGTGT+GGG | - | chr7_2:7862209-7862228 | Msa1047150:intron | 20.0% |
| !!! | AATTTTTGACAAAGATTGTA+AGG | + | chr7_2:7862520-7862539 | None:intergenic | 20.0% |
| !! | AAAATAGTGAAATTTCACAA+TGG | + | chr7_2:7862728-7862747 | None:intergenic | 20.0% |
| !! | AAAATATGAACTATATGATG+TGG | + | chr7_2:7863712-7863731 | None:intergenic | 20.0% |
| !!! | TATAGTTCATATTTTATCAC+AGG | - | chr7_2:7863717-7863736 | Msa1047150:intron | 20.0% |
| !! | ACACACAAATTATTATATTC+AGG | + | chr7_2:7863747-7863766 | None:intergenic | 20.0% |
| !!! | TTATGGTTTTGTATTAAGAA+TGG | - | chr7_2:7863781-7863800 | Msa1047150:intron | 20.0% |
| !! | CATGTATAATTTAACTGATA+GGG | - | chr7_2:7863864-7863883 | Msa1047150:intron | 20.0% |
| !!! | TTGTTTAAATTTTATTGCAC+AGG | + | chr7_2:7864056-7864075 | None:intergenic | 20.0% |
| !!! | TTTAATTGTGTTTTCTACAA+AGG | - | chr7_2:7864188-7864207 | Msa1047150:intron | 20.0% |
| !!! | AAGAGTAAGATTACTATTTT+AGG | - | chr7_2:7864496-7864515 | Msa1047150:CDS | 20.0% |
| !! | TATTCTTTGTATTATAACCA+AGG | + | chr7_2:7864730-7864749 | None:intergenic | 20.0% |
| !!! | AAGATGGTTAGAAAATATTT+TGG | - | chr7_2:7864776-7864795 | Msa1047150:intron | 20.0% |
| !!! | AAAATTCTAGATTTTAACAC+TGG | - | chr7_2:7865365-7865384 | Msa1047150:intron | 20.0% |
| !!! | TATTACTTTTTGTTGTTTTC+GGG | - | chr7_2:7865467-7865486 | Msa1047150:intron | 20.0% |
| ! | TAATTATTGGGTTATGTTGT+TGG | - | chr7_2:7860570-7860589 | Msa1047150:three_prime_UTR | 25.0% |
| ! | GTTGTTGGTATAAAAAAAGT+TGG | - | chr7_2:7860585-7860604 | Msa1047150:three_prime_UTR | 25.0% |
| ! | TTCAGTTCTTTAAACTAAAC+TGG | + | chr7_2:7860815-7860834 | None:intergenic | 25.0% |
| !! | TTTAGTTTAAAGAACTGAAC+AGG | - | chr7_2:7860816-7860835 | Msa1047150:intron | 25.0% |
| !! | AATGTTAAGTTGTTTATGGT+TGG | - | chr7_2:7861092-7861111 | Msa1047150:CDS | 25.0% |
| ! | CTTCAAATTTGAATCAATTC+TGG | - | chr7_2:7861175-7861194 | Msa1047150:intron | 25.0% |
| !!! | TTGAGAAGTTTAAGTTTTTG+TGG | - | chr7_2:7861389-7861408 | Msa1047150:intron | 25.0% |
| !! | TATGTATGTTTGTTTCTTGA+TGG | - | chr7_2:7861420-7861439 | Msa1047150:intron | 25.0% |
| !! | TTTGTTTCTTGATGGATATT+AGG | - | chr7_2:7861428-7861447 | Msa1047150:intron | 25.0% |
| ! | GATGTGAAGAAAAATATAGA+GGG | - | chr7_2:7861456-7861475 | Msa1047150:intron | 25.0% |
| !!! | AGCTTTAATTTTCCATGTAA+TGG | - | chr7_2:7861975-7861994 | Msa1047150:CDS | 25.0% |
| !!! | GCTTTAATTTTCCATGTAAT+GGG | - | chr7_2:7861976-7861995 | Msa1047150:CDS | 25.0% |
| ! | TAGAAAAAATGATTGGATGT+TGG | + | chr7_2:7862021-7862040 | None:intergenic | 25.0% |
| !! | AACTGCATATTTGAAATTGA+TGG | + | chr7_2:7862051-7862070 | None:intergenic | 25.0% |
| ! | AAATATGCAGTTACAAAAGT+GGG | - | chr7_2:7862059-7862078 | Msa1047150:CDS | 25.0% |
| !! | TGTGGATTTTTATTGGATAT+TGG | - | chr7_2:7862096-7862115 | Msa1047150:intron | 25.0% |
| ! | AAACACAATAGAAAAGACAA+AGG | + | chr7_2:7862153-7862172 | None:intergenic | 25.0% |
| !! | GTTTTTGATGTTTAAATGTG+TGG | - | chr7_2:7862208-7862227 | Msa1047150:intron | 25.0% |
| !!! | AACCTTCCTTCATTATTTTT+TGG | - | chr7_2:7862269-7862288 | Msa1047150:intron | 25.0% |
| !!! | ACCTTCCTTCATTATTTTTT+GGG | - | chr7_2:7862270-7862289 | Msa1047150:intron | 25.0% |
| !! | TTCTATTGCTTCCTTTTAAT+GGG | - | chr7_2:7862318-7862337 | Msa1047150:intron | 25.0% |
| ! | ACAAGAAAATTTGTACTTAC+CGG | + | chr7_2:7862487-7862506 | None:intergenic | 25.0% |
| ! | CCTAAATAATCATGCAAAAT+TGG | + | chr7_2:7862681-7862700 | None:intergenic | 25.0% |
| !! | CCAATTTTGCATGATTATTT+AGG | - | chr7_2:7862678-7862697 | Msa1047150:CDS | 25.0% |
| !!! | TAAGTTCACATTTGTTTCTA+TGG | - | chr7_2:7862862-7862881 | Msa1047150:intron | 25.0% |
| ! | TTAAATTCATCTCACTTTCA+GGG | - | chr7_2:7862928-7862947 | Msa1047150:intron | 25.0% |
| !! | TATCCAACAAATTCTAGAAA+TGG | - | chr7_2:7863258-7863277 | Msa1047150:intron | 25.0% |
| !! | ATCCAACAAATTCTAGAAAT+GGG | - | chr7_2:7863259-7863278 | Msa1047150:intron | 25.0% |
| ! | AATATTTGAGTGTCAAACAA+TGG | - | chr7_2:7863657-7863676 | Msa1047150:intron | 25.0% |
| ! | CCTATCAGTTAAATTATACA+TGG | + | chr7_2:7863866-7863885 | None:intergenic | 25.0% |
| ! | CCATGTATAATTTAACTGAT+AGG | - | chr7_2:7863863-7863882 | Msa1047150:intron | 25.0% |
| !! | CTCCATTACTATAATTTTCT+AGG | - | chr7_2:7864342-7864361 | Msa1047150:intron | 25.0% |
| ! | GTCCTAGAAAATTATAGTAA+TGG | + | chr7_2:7864347-7864366 | None:intergenic | 25.0% |
| ! | AAAACAAAATCCAAACCTAA+TGG | - | chr7_2:7864416-7864435 | Msa1047150:CDS | 25.0% |
| !! | ACTATATCTTTTGGTGAAAA+TGG | + | chr7_2:7864587-7864606 | None:intergenic | 25.0% |
| ! | ATCTTCCCTAGATTAATATA+TGG | + | chr7_2:7864761-7864780 | None:intergenic | 25.0% |
| ! | ATATATTAATCTAGGGAAGA+TGG | - | chr7_2:7864760-7864779 | Msa1047150:intron | 25.0% |
| ! | TTATTACATTATTGTGCAAG+AGG | + | chr7_2:7865200-7865219 | None:intergenic | 25.0% |
| !! | ACTAATCATCAAACTCATTT+TGG | + | chr7_2:7865344-7865363 | None:intergenic | 25.0% |
| !!! | CAATTCTAATTTCTAGTCAA+TGG | + | chr7_2:7865514-7865533 | None:intergenic | 25.0% |
| ! | ACTAGAAATTAGAATTGTGT+TGG | - | chr7_2:7865517-7865536 | Msa1047150:exon | 25.0% |
| ! | CTAGAAATTAGAATTGTGTT+GGG | - | chr7_2:7865518-7865537 | Msa1047150:exon | 25.0% |
| ATTAACGTGAAGACTCTTAA+GGG | - | chr7_2:7860442-7860461 | Msa1047150:three_prime_UTR | 30.0% | |
| TTGAATGTAGTTACATGTGT+CGG | - | chr7_2:7860703-7860722 | Msa1047150:CDS | 30.0% | |
| GTTCTTTAAACTAAACTGGA+AGG | + | chr7_2:7860811-7860830 | None:intergenic | 30.0% | |
| ! | TGCAATATTAGTGCATGTTT+TGG | - | chr7_2:7861025-7861044 | Msa1047150:intron | 30.0% |
| CAAATTTGAATCAATTCTGG+AGG | - | chr7_2:7861178-7861197 | Msa1047150:intron | 30.0% | |
| ! | TTTCTTGATGGATATTAGGT+TGG | - | chr7_2:7861432-7861451 | Msa1047150:intron | 30.0% |
| CGATGTGAAGAAAAATATAG+AGG | - | chr7_2:7861455-7861474 | Msa1047150:intron | 30.0% | |
| CAACAAATGCTTATTCATCA+AGG | - | chr7_2:7861510-7861529 | Msa1047150:CDS | 30.0% | |
| CATTGAATGTCAATGGATAA+TGG | + | chr7_2:7861950-7861969 | None:intergenic | 30.0% | |
| CAAATATGCAGTTACAAAAG+TGG | - | chr7_2:7862058-7862077 | Msa1047150:CDS | 30.0% | |
| ! | GCAGAATTGTGGATTTTTAT+TGG | - | chr7_2:7862089-7862108 | Msa1047150:intron | 30.0% |
| AGGAAGGTTAAAAGACATAA+AGG | + | chr7_2:7862258-7862277 | None:intergenic | 30.0% | |
| ACCCAAAAAATAATGAAGGA+AGG | + | chr7_2:7862274-7862293 | None:intergenic | 30.0% | |
| TAGCACCCAAAAAATAATGA+AGG | + | chr7_2:7862278-7862297 | None:intergenic | 30.0% | |
| ! | CTTCTATTGCTTCCTTTTAA+TGG | - | chr7_2:7862317-7862336 | Msa1047150:intron | 30.0% |
| ! | TCTATTGCTTCCTTTTAATG+GGG | - | chr7_2:7862319-7862338 | Msa1047150:intron | 30.0% |
| ! | TTTTCTTGTTCCCCATTAAA+AGG | + | chr7_2:7862332-7862351 | None:intergenic | 30.0% |
| TGGACAGAATATTACAACTT+AGG | + | chr7_2:7862377-7862396 | None:intergenic | 30.0% | |
| AGTTGTAATATTCTGTCCAT+TGG | - | chr7_2:7862378-7862397 | Msa1047150:intron | 30.0% | |
| AAAGTTTAGAAGTGAACCAA+TGG | + | chr7_2:7862397-7862416 | None:intergenic | 30.0% | |
| ATGATACCTTATTCTGCAAA+GGG | + | chr7_2:7862432-7862451 | None:intergenic | 30.0% | |
| AGATGAGTAATGCAATGATT+TGG | - | chr7_2:7862608-7862627 | Msa1047150:CDS | 30.0% | |
| CAAAATTGGATATTGTGAAG+AGG | + | chr7_2:7862667-7862686 | None:intergenic | 30.0% | |
| TGCTCGCTATTTATATATGT+AGG | - | chr7_2:7862765-7862784 | Msa1047150:intron | 30.0% | |
| GTTAAATTCATCTCACTTTC+AGG | - | chr7_2:7862927-7862946 | Msa1047150:intron | 30.0% | |
| TAAATTCATCTCACTTTCAG+GGG | - | chr7_2:7862929-7862948 | Msa1047150:intron | 30.0% | |
| ACATAAATATGCATCAGTTG+TGG | - | chr7_2:7863035-7863054 | Msa1047150:intron | 30.0% | |
| ATAAGACACTATCTACACAA+GGG | + | chr7_2:7863063-7863082 | None:intergenic | 30.0% | |
| AATAAGACACTATCTACACA+AGG | + | chr7_2:7863064-7863083 | None:intergenic | 30.0% | |
| ATGCCTAAGAATAAGAGAAT+AGG | + | chr7_2:7863097-7863116 | None:intergenic | 30.0% | |
| !! | TCTAGAATTTGTTGGATAGT+TGG | + | chr7_2:7863256-7863275 | None:intergenic | 30.0% |
| ! | TCCAACAAATTCTAGAAATG+GGG | - | chr7_2:7863260-7863279 | Msa1047150:intron | 30.0% |
| TAGATATTCAACAGCTCTTT+CGG | + | chr7_2:7863344-7863363 | None:intergenic | 30.0% | |
| !!! | GGGTGTTTTTGCTATTAATT+TGG | - | chr7_2:7863421-7863440 | Msa1047150:intron | 30.0% |
| GCAAATCATTAAAACTGTAC+TGG | + | chr7_2:7863572-7863591 | None:intergenic | 30.0% | |
| AATACAATGAATAACGGTGA+AGG | - | chr7_2:7863621-7863640 | Msa1047150:intron | 30.0% | |
| ! | GTTCATATTTTATCACAGGA+TGG | - | chr7_2:7863721-7863740 | Msa1047150:intron | 30.0% |
| ! | TTTTCATTTGCACCCAAATT+GGG | + | chr7_2:7864127-7864146 | None:intergenic | 30.0% |
| ! | ATTTTCATTTGCACCCAAAT+TGG | + | chr7_2:7864128-7864147 | None:intergenic | 30.0% |
| !!! | GAAAATGGTTTTAGTCAAGT+TGG | + | chr7_2:7864572-7864591 | None:intergenic | 30.0% |
| GAGCAAACAAATGTCTTAAT+AGG | + | chr7_2:7864802-7864821 | None:intergenic | 30.0% | |
| ! | ACTTTTGTATTTGTATGACC+AGG | - | chr7_2:7864822-7864841 | Msa1047150:intron | 30.0% |
| TCACAATTAAAACAGCTGAA+TGG | + | chr7_2:7864947-7864966 | None:intergenic | 30.0% | |
| ATGGTGATTTACAGATACTT+TGG | + | chr7_2:7865495-7865514 | None:intergenic | 30.0% | |
| AAATTAGAATTGTGTTGGGA+TGG | - | chr7_2:7865522-7865541 | Msa1047150:exon | 30.0% | |
| GATTAACGTGAAGACTCTTA+AGG | - | chr7_2:7860441-7860460 | Msa1047150:three_prime_UTR | 35.0% | |
| ! | TGCATGTCTAGAATCAATTC+TGG | - | chr7_2:7861248-7861267 | Msa1047150:intron | 35.0% |
| AGTATGACTAAGCCTGTATT+TGG | + | chr7_2:7861291-7861310 | None:intergenic | 35.0% | |
| ! | AAAAATATAGAGGGAGCACA+GGG | - | chr7_2:7861465-7861484 | Msa1047150:intron | 35.0% |
| !! | TCATCAAGGAAAAGTGCTTA+AGG | - | chr7_2:7861524-7861543 | Msa1047150:CDS | 35.0% |
| ! | AGCAACTTGATTTTCTTCCA+AGG | + | chr7_2:7861559-7861578 | None:intergenic | 35.0% |
| CTTCTCTCATTGAATGTCAA+TGG | + | chr7_2:7861957-7861976 | None:intergenic | 35.0% | |
| GACATAGAAAACCCATTACA+TGG | + | chr7_2:7861990-7862009 | None:intergenic | 35.0% | |
| AGTTACAAAAGTGGGTGATA+TGG | - | chr7_2:7862067-7862086 | Msa1047150:intron | 35.0% | |
| GTTAGTAAGACATTAACAGC+AGG | - | chr7_2:7862231-7862250 | Msa1047150:intron | 35.0% | |
| TGGGGAACAAGAAAAATCAT+TGG | - | chr7_2:7862337-7862356 | Msa1047150:intron | 35.0% | |
| GATGATACCTTATTCTGCAA+AGG | + | chr7_2:7862433-7862452 | None:intergenic | 35.0% | |
| ! | CAGAATAAGGTATCATCAAG+TGG | - | chr7_2:7862436-7862455 | Msa1047150:intron | 35.0% |
| AAAATTTGTACTTACCGGTG+GGG | + | chr7_2:7862482-7862501 | None:intergenic | 35.0% | |
| GAAAATTTGTACTTACCGGT+GGG | + | chr7_2:7862483-7862502 | None:intergenic | 35.0% | |
| AGAAAATTTGTACTTACCGG+TGG | + | chr7_2:7862484-7862503 | None:intergenic | 35.0% | |
| CCTAAGAATAAGAGAATAGG+CGG | + | chr7_2:7863094-7863113 | None:intergenic | 35.0% | |
| ATACGTTGTTTATTGCAGTG+TGG | - | chr7_2:7863174-7863193 | Msa1047150:intron | 35.0% | |
| CAATGAGATTAGATTCAGCT+TGG | + | chr7_2:7863216-7863235 | None:intergenic | 35.0% | |
| ! | CCAACAAATTCTAGAAATGG+GGG | - | chr7_2:7863261-7863280 | Msa1047150:intron | 35.0% |
| ! | CAACAAATTCTAGAAATGGG+GGG | - | chr7_2:7863262-7863281 | Msa1047150:intron | 35.0% |
| AGATATTCAACAGCTCTTTC+GGG | + | chr7_2:7863343-7863362 | None:intergenic | 35.0% | |
| ATGGGAAAGCTAGATTATGT+GGG | + | chr7_2:7863385-7863404 | None:intergenic | 35.0% | |
| TACTACAAGCATAAGTTGTG+CGG | + | chr7_2:7863534-7863553 | None:intergenic | 35.0% | |
| AAATGAAAATGCAGGTGACT+TGG | - | chr7_2:7864138-7864157 | Msa1047150:intron | 35.0% | |
| TTACGTCTTATAAATGAGCC+TGG | - | chr7_2:7864468-7864487 | Msa1047150:CDS | 35.0% | |
| ! | TAGGGTCATCATTTTATCAC+TGG | - | chr7_2:7864703-7864722 | Msa1047150:intron | 35.0% |
| ! | ATCATTTTATCACTGGACCT+TGG | - | chr7_2:7864710-7864729 | Msa1047150:intron | 35.0% |
| TCTATGTATTTGCTTGTCCA+TGG | - | chr7_2:7864982-7865001 | Msa1047150:intron | 35.0% | |
| CAACATTACTAAACATGCCA+TGG | + | chr7_2:7865002-7865021 | None:intergenic | 35.0% | |
| ! | AGAGTGCAAAACCAGTATTT+TGG | + | chr7_2:7865078-7865097 | None:intergenic | 35.0% |
| ATTCTTCATGCATCTTTCTC+AGG | - | chr7_2:7865120-7865139 | Msa1047150:intron | 35.0% | |
| ! | CATAACTGACCATGACATTT+TGG | - | chr7_2:7865220-7865239 | Msa1047150:intron | 35.0% |
| !! | ACTCATTTTGGTGATCCAAT+AGG | + | chr7_2:7865332-7865351 | None:intergenic | 35.0% |
| TGTTTGTGTCCTAAACTCTT+TGG | - | chr7_2:7865432-7865451 | Msa1047150:intron | 35.0% | |
| ATCACTTCTCCAAAGAGTTT+AGG | + | chr7_2:7865444-7865463 | None:intergenic | 35.0% | |
| GAATTGTATATTTCAGTGCG+TGG | - | chr7_2:7865572-7865591 | Msa1047150:five_prime_UTR | 35.0% | |
| GAAACTTCACAGCAGAACTT+TGG | + | chr7_2:7860329-7860348 | None:intergenic | 40.0% | |
| GAGATATCCACGTCTATTGT+CGG | - | chr7_2:7860780-7860799 | Msa1047150:intron | 40.0% | |
| TTCGATACATGTCAGTGTCT+GGG | + | chr7_2:7860915-7860934 | None:intergenic | 40.0% | |
| ACACTGACATGTATCGAACA+CGG | - | chr7_2:7860917-7860936 | Msa1047150:intron | 40.0% | |
| ! | GAACACGGGATTTAAAGTGT+TGG | - | chr7_2:7860932-7860951 | Msa1047150:intron | 40.0% |
| !! | AGTGTTGGTACTTTCTGACT+AGG | - | chr7_2:7860947-7860966 | Msa1047150:intron | 40.0% |
| ! | GTGTTGGTACTTTCTGACTA+GGG | - | chr7_2:7860948-7860967 | Msa1047150:intron | 40.0% |
| TGTTGGTACTTTCTGACTAG+GGG | - | chr7_2:7860949-7860968 | Msa1047150:intron | 40.0% | |
| ! | AATTCTGGCTACTCCAAACA+AGG | - | chr7_2:7861263-7861282 | Msa1047150:intron | 40.0% |
| ! | GAAAAATATAGAGGGAGCAC+AGG | - | chr7_2:7861464-7861483 | Msa1047150:intron | 40.0% |
| !! | TAAGCATTTGTTGTGCAGCA+GGG | + | chr7_2:7861503-7861522 | None:intergenic | 40.0% |
| !! | ATAAGCATTTGTTGTGCAGC+AGG | + | chr7_2:7861504-7861523 | None:intergenic | 40.0% |
| TGTCGTGATCATGTTGTCTA+AGG | - | chr7_2:7861590-7861609 | Msa1047150:intron | 40.0% | |
| GATCTTCCCTTTGCAGAATA+AGG | - | chr7_2:7862423-7862442 | Msa1047150:intron | 40.0% | |
| ATGTCAGATGCTTACGTAGT+GGG | + | chr7_2:7862989-7863008 | None:intergenic | 40.0% | |
| TATGTCAGATGCTTACGTAG+TGG | + | chr7_2:7862990-7863009 | None:intergenic | 40.0% | |
| CCGCCTATTCTCTTATTCTT+AGG | - | chr7_2:7863091-7863110 | Msa1047150:intron | 40.0% | |
| GCTGAATCTAATCTCATTGC+TGG | - | chr7_2:7863217-7863236 | Msa1047150:intron | 40.0% | |
| !! | CCCCCATTTCTAGAATTTGT+TGG | + | chr7_2:7863264-7863283 | None:intergenic | 40.0% |
| CATGGGAAAGCTAGATTATG+TGG | + | chr7_2:7863386-7863405 | None:intergenic | 40.0% | |
| CCATACTCGATACTTCACAT+GGG | + | chr7_2:7863403-7863422 | None:intergenic | 40.0% | |
| !! | CCATGTGAAGTATCGAGTAT+GGG | - | chr7_2:7863401-7863420 | Msa1047150:intron | 40.0% |
| ACTACAAGCATAAGTTGTGC+GGG | + | chr7_2:7863533-7863552 | None:intergenic | 40.0% | |
| TTTGTGTGTTTGCAGCAAAG+TGG | - | chr7_2:7863758-7863777 | Msa1047150:intron | 40.0% | |
| TGTTTGCAGCAAAGTGGTTA+TGG | - | chr7_2:7863764-7863783 | Msa1047150:intron | 40.0% | |
| ! | TAATCAGGGCATTCCCAATT+TGG | - | chr7_2:7864111-7864130 | Msa1047150:intron | 40.0% |
| ! | AATCAGGGCATTCCCAATTT+GGG | - | chr7_2:7864112-7864131 | Msa1047150:intron | 40.0% |
| TTGGGTGCAAATGAAAATGC+AGG | - | chr7_2:7864130-7864149 | Msa1047150:intron | 40.0% | |
| ATTTCTGCGAAACAGTCAAC+AGG | - | chr7_2:7864162-7864181 | Msa1047150:intron | 40.0% | |
| TTTCCTAGTTCCTGAAGCAT+GGG | + | chr7_2:7864399-7864418 | None:intergenic | 40.0% | |
| ! | TTTTCCTAGTTCCTGAAGCA+TGG | + | chr7_2:7864400-7864419 | None:intergenic | 40.0% |
| TGGATGAGTTCCATTAGGTT+TGG | + | chr7_2:7864429-7864448 | None:intergenic | 40.0% | |
| TACACAGATGACGAGCTTAA+TGG | - | chr7_2:7864619-7864638 | Msa1047150:intron | 40.0% | |
| GTAGAGCTCAACCAAAATAC+TGG | - | chr7_2:7865064-7865083 | Msa1047150:intron | 40.0% | |
| !! | ATTTTGGCAGCTTGAGGATA+TGG | - | chr7_2:7865236-7865255 | Msa1047150:intron | 40.0% |
| ! | TTTTGGCAGCTTGAGGATAT+GGG | - | chr7_2:7865237-7865256 | Msa1047150:intron | 40.0% |
| CTTTGCGTGCAATAAAAACG+AGG | - | chr7_2:7865290-7865309 | Msa1047150:intron | 40.0% | |
| GTGCAATAAAAACGAGGATC+TGG | - | chr7_2:7865296-7865315 | Msa1047150:intron | 40.0% | |
| ! | TTGGTGATCCAATAGGTAGT+TGG | + | chr7_2:7865325-7865344 | None:intergenic | 40.0% |
| ! | AGGGGTTTTTGCTTCGGTTT+GGG | + | chr7_2:7860369-7860388 | None:intergenic | 45.0% |
| CCAAGTGAACGCTCAAGATA+CGG | - | chr7_2:7860480-7860499 | Msa1047150:three_prime_UTR | 45.0% | |
| ! | GTAGTTACATGTGTCGGTGT+CGG | - | chr7_2:7860709-7860728 | Msa1047150:intron | 45.0% |
| AAGTGTCAGTGCTTTAGTGC+TGG | - | chr7_2:7860755-7860774 | Msa1047150:intron | 45.0% | |
| AGTGTCAGTGCTTTAGTGCT+GGG | - | chr7_2:7860756-7860775 | Msa1047150:intron | 45.0% | |
| GTTCGATACATGTCAGTGTC+TGG | + | chr7_2:7860916-7860935 | None:intergenic | 45.0% | |
| CACTGACATGTATCGAACAC+GGG | - | chr7_2:7860918-7860937 | Msa1047150:intron | 45.0% | |
| ! | CCTGTATTTGGCTCCTTGTT+TGG | + | chr7_2:7861279-7861298 | None:intergenic | 45.0% |
| CCAAACAAGGAGCCAAATAC+AGG | - | chr7_2:7861276-7861295 | Msa1047150:intron | 45.0% | |
| GCTTAAGGATGAGACTACCT+TGG | - | chr7_2:7861539-7861558 | Msa1047150:CDS | 45.0% | |
| GTTGGGGAAGCTAGAAAACA+AGG | - | chr7_2:7861706-7861725 | Msa1047150:intron | 45.0% | |
| TGGGTGATATGGCAGAATTG+TGG | - | chr7_2:7862078-7862097 | Msa1047150:intron | 45.0% | |
| AGGCAAAGAACTTGCAGGTT+GGG | + | chr7_2:7862794-7862813 | None:intergenic | 45.0% | |
| TACAAGACCTTGCGCAAGAT+TGG | + | chr7_2:7862960-7862979 | None:intergenic | 45.0% | |
| ! | CAAATTCTAGAAATGGGGGG+AGG | - | chr7_2:7863265-7863284 | Msa1047150:intron | 45.0% |
| TATATGCAGCACGAAGAGCT+CGG | + | chr7_2:7863315-7863334 | None:intergenic | 45.0% | |
| !! | CCCATGTGAAGTATCGAGTA+TGG | - | chr7_2:7863400-7863419 | Msa1047150:intron | 45.0% |
| CCCATACTCGATACTTCACA+TGG | + | chr7_2:7863404-7863423 | None:intergenic | 45.0% | |
| CAATGAATAACGGTGAAGGC+AGG | - | chr7_2:7863625-7863644 | Msa1047150:intron | 45.0% | |
| TTGCTGCATCCACCAATGTT+GGG | - | chr7_2:7863916-7863935 | Msa1047150:intron | 45.0% | |
| ! | GTTTTCTTCCTGCCCAACAT+TGG | + | chr7_2:7863931-7863950 | None:intergenic | 45.0% |
| !! | AAGTTCAGTGGGTTGGTGTT+AGG | + | chr7_2:7863999-7864018 | None:intergenic | 45.0% |
| AGTTCACAGTACACACCTGA+GGG | + | chr7_2:7864025-7864044 | None:intergenic | 45.0% | |
| GTTCCAAGCCTTGAGAACAA+TGG | - | chr7_2:7864270-7864289 | Msa1047150:intron | 45.0% | |
| TGCTTGCACCATTGTTCTCA+AGG | + | chr7_2:7864281-7864300 | None:intergenic | 45.0% | |
| GCTCTTGGATGAGTTCCATT+AGG | + | chr7_2:7864434-7864453 | None:intergenic | 45.0% | |
| AGAAGTCAGCTTGATGCTCT+TGG | + | chr7_2:7864449-7864468 | None:intergenic | 45.0% | |
| CGTCTTATAAATGAGCCTGG+AGG | - | chr7_2:7864471-7864490 | Msa1047150:CDS | 45.0% | |
| TAATCTTACTCTTCGCCTCC+AGG | + | chr7_2:7864489-7864508 | None:intergenic | 45.0% | |
| ACACCACAAGCAGATGCATA+GGG | - | chr7_2:7864685-7864704 | Msa1047150:intron | 45.0% | |
| TTGTATGACCAGGAACCTAG+AGG | - | chr7_2:7864832-7864851 | Msa1047150:intron | 45.0% | |
| TGTATGACCAGGAACCTAGA+GGG | - | chr7_2:7864833-7864852 | Msa1047150:intron | 45.0% | |
| !! | CTCTTCTGGGGTGATAGTAA+TGG | + | chr7_2:7864885-7864904 | None:intergenic | 45.0% |
| AAGAGAACGAGGCCATTCAA+CGG | - | chr7_2:7864900-7864919 | Msa1047150:intron | 45.0% | |
| ! | TCACTAGCTTACCCGTTGAA+TGG | + | chr7_2:7864915-7864934 | None:intergenic | 45.0% |
| CTCAAGCTGCCAAAATGTCA+TGG | + | chr7_2:7865232-7865251 | None:intergenic | 45.0% | |
| !! | CATGACATTTTGGCAGCTTG+AGG | - | chr7_2:7865230-7865249 | Msa1047150:intron | 45.0% |
| TTTGGCAGCTTGAGGATATG+GGG | - | chr7_2:7865238-7865257 | Msa1047150:intron | 45.0% | |
| ACACCTCCAACACAAGATCT+CGG | + | chr7_2:7865269-7865288 | None:intergenic | 45.0% | |
| !!! | TTTCTTTTAATTTTAATTAT+TGG | - | chr7_2:7860557-7860576 | Msa1047150:three_prime_UTR | 5.0% |
| !!! | TTCTTTTAATTTTAATTATT+GGG | - | chr7_2:7860558-7860577 | Msa1047150:three_prime_UTR | 5.0% |
| !!! | GGGTTTTTGCTTCGGTTTGG+GGG | + | chr7_2:7860367-7860386 | None:intergenic | 50.0% |
| !! | GGGGTTTTTGCTTCGGTTTG+GGG | + | chr7_2:7860368-7860387 | None:intergenic | 50.0% |
| ! | GAGGGGTTTTTGCTTCGGTT+TGG | + | chr7_2:7860370-7860389 | None:intergenic | 50.0% |
| ! | TGGAGGAGGGGTTTTTGCTT+CGG | + | chr7_2:7860375-7860394 | None:intergenic | 50.0% |
| CCGTATCTTGAGCGTTCACT+TGG | + | chr7_2:7860483-7860502 | None:intergenic | 50.0% | |
| CGACGTATCAGTGTCGTATC+AGG | + | chr7_2:7860651-7860670 | None:intergenic | 50.0% | |
| GAGGCAAAGAACTTGCAGGT+TGG | + | chr7_2:7862795-7862814 | None:intergenic | 50.0% | |
| !! | TGATGAGGTGTTGACGAAGG+GGG | + | chr7_2:7862817-7862836 | None:intergenic | 50.0% |
| !! | CTGATGAGGTGTTGACGAAG+GGG | + | chr7_2:7862818-7862837 | None:intergenic | 50.0% |
| !! | GCTGATGAGGTGTTGACGAA+GGG | + | chr7_2:7862819-7862838 | None:intergenic | 50.0% |
| ! | TACTGTCCGACAGTTGATGC+AGG | + | chr7_2:7862844-7862863 | None:intergenic | 50.0% |
| GGAGAATCCAATCTTGCGCA+AGG | - | chr7_2:7862950-7862969 | Msa1047150:intron | 50.0% | |
| ! | TCAGATGCTTACGTAGTGGG+AGG | + | chr7_2:7862986-7863005 | None:intergenic | 50.0% |
| AGTGTGGTGCCTGACACATA+TGG | - | chr7_2:7863190-7863209 | Msa1047150:intron | 50.0% | |
| TCAGCTTGGCCATATGTGTC+AGG | + | chr7_2:7863202-7863221 | None:intergenic | 50.0% | |
| TAGAAATGGGGGGAGGAAGT+TGG | - | chr7_2:7863272-7863291 | Msa1047150:intron | 50.0% | |
| AGAAATGGGGGGAGGAAGTT+GGG | - | chr7_2:7863273-7863292 | Msa1047150:intron | 50.0% | |
| ! | TGCTGGAGCTTCAGCTTGTT+CGG | + | chr7_2:7863895-7863914 | None:intergenic | 50.0% |
| GTTGCTGCATCCACCAATGT+TGG | - | chr7_2:7863915-7863934 | Msa1047150:intron | 50.0% | |
| TTCTTCCTGCCCAACATTGG+TGG | + | chr7_2:7863928-7863947 | None:intergenic | 50.0% | |
| GGAAGAAAACCCTTCAGCTC+AGG | - | chr7_2:7863941-7863960 | Msa1047150:intron | 50.0% | |
| AGGGAACAAGTTCAGTGGGT+TGG | + | chr7_2:7864006-7864025 | None:intergenic | 50.0% | |
| CCTGAGGGAACAAGTTCAGT+GGG | + | chr7_2:7864010-7864029 | None:intergenic | 50.0% | |
| ACCTGAGGGAACAAGTTCAG+TGG | + | chr7_2:7864011-7864030 | None:intergenic | 50.0% | |
| CAGTTCACAGTACACACCTG+AGG | + | chr7_2:7864026-7864045 | None:intergenic | 50.0% | |
| GCACCATTGTTCTCAAGGCT+TGG | + | chr7_2:7864276-7864295 | None:intergenic | 50.0% | |
| TTCTTTGCAGCCCATGCTTC+AGG | - | chr7_2:7864386-7864405 | Msa1047150:CDS | 50.0% | |
| CACACCACAAGCAGATGCAT+AGG | - | chr7_2:7864684-7864703 | Msa1047150:intron | 50.0% | |
| TGACCCTATGCATCTGCTTG+TGG | + | chr7_2:7864691-7864710 | None:intergenic | 50.0% | |
| AGGAACCTAGAGGGACAGTT+GGG | - | chr7_2:7864842-7864861 | Msa1047150:intron | 50.0% | |
| GGGGTGATAGTAATGGTCTG+AGG | + | chr7_2:7864878-7864897 | None:intergenic | 50.0% | |
| TATCACCCCAGAAGAGAACG+AGG | - | chr7_2:7864889-7864908 | Msa1047150:intron | 50.0% | |
| AATGGCCTCGTTCTCTTCTG+GGG | + | chr7_2:7864897-7864916 | None:intergenic | 50.0% | |
| GAATGGCCTCGTTCTCTTCT+GGG | + | chr7_2:7864898-7864917 | None:intergenic | 50.0% | |
| TGAATGGCCTCGTTCTCTTC+TGG | + | chr7_2:7864899-7864918 | None:intergenic | 50.0% | |
| AGAGAACGAGGCCATTCAAC+GGG | - | chr7_2:7864901-7864920 | Msa1047150:intron | 50.0% | |
| GTTCGACCGAGATCTTGTGT+TGG | - | chr7_2:7865260-7865279 | Msa1047150:intron | 50.0% | |
| TCTGGCAGCCAACTACCTAT+TGG | - | chr7_2:7865314-7865333 | Msa1047150:intron | 50.0% | |
| AGAAATCACCACCGCGCACA+CGG | + | chr7_2:7860398-7860417 | None:intergenic | 55.0% | |
| GCGCGGTGGTGATTTCTGAT+CGG | - | chr7_2:7860401-7860420 | Msa1047150:three_prime_UTR | 55.0% | |
| GGTGTGTCCGACAATAGACG+TGG | + | chr7_2:7860790-7860809 | None:intergenic | 55.0% | |
| !! | GGCTGATGAGGTGTTGACGA+AGG | + | chr7_2:7862820-7862839 | None:intergenic | 55.0% |
| GTTGATGCAGGAGGCTGATG+AGG | + | chr7_2:7862832-7862851 | None:intergenic | 55.0% | |
| CAGCCTCCTGCATCAACTGT+CGG | - | chr7_2:7862835-7862854 | Msa1047150:intron | 55.0% | |
| ! | TGTCCGACAGTTGATGCAGG+AGG | + | chr7_2:7862841-7862860 | None:intergenic | 55.0% |
| ! | CTGGAGCTTCAGCTTGTTCG+GGG | + | chr7_2:7863893-7863912 | None:intergenic | 55.0% |
| ! | GCTGGAGCTTCAGCTTGTTC+GGG | + | chr7_2:7863894-7863913 | None:intergenic | 55.0% |
| ! | TTGGTGGATGCAGCAACTGC+TGG | + | chr7_2:7863912-7863931 | None:intergenic | 55.0% |
| TGCATCCACCAATGTTGGGC+AGG | - | chr7_2:7863920-7863939 | Msa1047150:intron | 55.0% | |
| AACAGCAGGCACAGCTGGTT+GGG | + | chr7_2:7863973-7863992 | None:intergenic | 55.0% | |
| AACCAGCTGTGCCTGCTGTT+GGG | - | chr7_2:7863973-7863992 | Msa1047150:intron | 55.0% | |
| !! | TTGGTGTTAGGCCCAACAGC+AGG | + | chr7_2:7863987-7864006 | None:intergenic | 55.0% |
| ! | CCCACTGAACTTGTTCCCTC+AGG | - | chr7_2:7864007-7864026 | Msa1047150:intron | 55.0% |
| CAGCCCATGCTTCAGGAACT+AGG | - | chr7_2:7864393-7864412 | Msa1047150:CDS | 55.0% | |
| CAACTGTCCCTCTAGGTTCC+TGG | + | chr7_2:7864843-7864862 | None:intergenic | 55.0% | |
| CAGGAACCTAGAGGGACAGT+TGG | - | chr7_2:7864841-7864860 | Msa1047150:intron | 55.0% | |
| AAGCACCCAACTGTCCCTCT+AGG | + | chr7_2:7864850-7864869 | None:intergenic | 55.0% | |
| AGAGGGACAGTTGGGTGCTT+TGG | - | chr7_2:7864850-7864869 | Msa1047150:intron | 55.0% | |
| CGACCGAGATCTTGTGTTGG+AGG | - | chr7_2:7865263-7865282 | Msa1047150:intron | 55.0% | |
| GGGGGAGGCAAAGAACTTGC+AGG | + | chr7_2:7862799-7862818 | None:intergenic | 60.0% | |
| !! | TGAGGTGTTGACGAAGGGGG+AGG | + | chr7_2:7862814-7862833 | None:intergenic | 60.0% |
| TGGGGGGAGGAAGTTGGGAT+CGG | - | chr7_2:7863278-7863297 | Msa1047150:intron | 60.0% | |
| CAACAGCAGGCACAGCTGGT+TGG | + | chr7_2:7863974-7863993 | None:intergenic | 60.0% | |
| CAACCAGCTGTGCCTGCTGT+TGG | - | chr7_2:7863972-7863991 | Msa1047150:intron | 60.0% | |
| AATCACCACCGCGCACACGG+TGG | + | chr7_2:7860395-7860414 | None:intergenic | 65.0% | |
| TGGGGCAGCTGAAGCAGCAG+AGG | + | chr7_2:7862464-7862483 | None:intergenic | 65.0% | |
| ! | TGCTGCTTCAGCTGCCCCAC+CGG | - | chr7_2:7862465-7862484 | Msa1047150:intron | 65.0% |
| GGGGGGAGGAAGTTGGGATC+GGG | - | chr7_2:7863279-7863298 | Msa1047150:intron | 65.0% | |
| GGGCTGGAGCCTGAGCTGAA+GGG | + | chr7_2:7863953-7863972 | None:intergenic | 65.0% | |
| ! | TGGGCTGGAGCCTGAGCTGA+AGG | + | chr7_2:7863954-7863973 | None:intergenic | 65.0% |
| ACCGCGCACACGGTGGAGGA+GGG | + | chr7_2:7860388-7860407 | None:intergenic | 70.0% | |
| GCAGGCACAGCTGGTTGGGC+TGG | + | chr7_2:7863969-7863988 | None:intergenic | 70.0% | |
| GGCCCAACAGCAGGCACAGC+TGG | + | chr7_2:7863978-7863997 | None:intergenic | 70.0% | |
| CCGCGCACACGGTGGAGGAG+GGG | + | chr7_2:7860387-7860406 | None:intergenic | 75.0% | |
| CCCCTCCTCCACCGTGTGCG+CGG | - | chr7_2:7860384-7860403 | Msa1047150:three_prime_UTR | 75.0% | |
| CACCGCGCACACGGTGGAGG+AGG | + | chr7_2:7860389-7860408 | None:intergenic | 75.0% | |
| CTCCTCCACCGTGTGCGCGG+TGG | - | chr7_2:7860387-7860406 | Msa1047150:three_prime_UTR | 75.0% | |
| CACCACCGCGCACACGGTGG+AGG | + | chr7_2:7860392-7860411 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 7860316 | 7865653 | 7860316 | ID=Msa1047150;Name=Msa1047150 |
| chr7_2 | mRNA | 7860316 | 7865653 | 7860316 | ID=Msa1047150-mRNA-1;Parent=Msa1047150;Name=Msa1047150-mRNA-1;_AED=0.06;_eAED=0.06;_QI=120|1|1|1|1|1|12|291|376 |
| chr7_2 | exon | 7860316 | 7860723 | 7860316 | ID=Msa1047150-mRNA-1:exon:2046;Parent=Msa1047150-mRNA-1 |
| chr7_2 | exon | 7861047 | 7861125 | 7861047 | ID=Msa1047150-mRNA-1:exon:2045;Parent=Msa1047150-mRNA-1 |
| chr7_2 | exon | 7861470 | 7861573 | 7861470 | ID=Msa1047150-mRNA-1:exon:2044;Parent=Msa1047150-mRNA-1 |
| chr7_2 | exon | 7861651 | 7861698 | 7861651 | ID=Msa1047150-mRNA-1:exon:2043;Parent=Msa1047150-mRNA-1 |
| chr7_2 | exon | 7861786 | 7861851 | 7861786 | ID=Msa1047150-mRNA-1:exon:2042;Parent=Msa1047150-mRNA-1 |
| chr7_2 | exon | 7861941 | 7862084 | 7861941 | ID=Msa1047150-mRNA-1:exon:2041;Parent=Msa1047150-mRNA-1 |
| chr7_2 | exon | 7862600 | 7862777 | 7862600 | ID=Msa1047150-mRNA-1:exon:2040;Parent=Msa1047150-mRNA-1 |
| chr7_2 | exon | 7862976 | 7863020 | 7862976 | ID=Msa1047150-mRNA-1:exon:2039;Parent=Msa1047150-mRNA-1 |
| chr7_2 | exon | 7863109 | 7863182 | 7863109 | ID=Msa1047150-mRNA-1:exon:2038;Parent=Msa1047150-mRNA-1 |
| chr7_2 | exon | 7863483 | 7863530 | 7863483 | ID=Msa1047150-mRNA-1:exon:2037;Parent=Msa1047150-mRNA-1 |
| chr7_2 | exon | 7864358 | 7864519 | 7864358 | ID=Msa1047150-mRNA-1:exon:2036;Parent=Msa1047150-mRNA-1 |
| chr7_2 | exon | 7865468 | 7865653 | 7865468 | ID=Msa1047150-mRNA-1:exon:2035;Parent=Msa1047150-mRNA-1 |
| chr7_2 | five_prime_UTR | 7865534 | 7865653 | 7865534 | ID=Msa1047150-mRNA-1:five_prime_utr;Parent=Msa1047150-mRNA-1 |
| chr7_2 | CDS | 7865468 | 7865533 | 7865468 | ID=Msa1047150-mRNA-1:cds;Parent=Msa1047150-mRNA-1 |
| chr7_2 | CDS | 7864358 | 7864519 | 7864358 | ID=Msa1047150-mRNA-1:cds;Parent=Msa1047150-mRNA-1 |
| chr7_2 | CDS | 7863483 | 7863530 | 7863483 | ID=Msa1047150-mRNA-1:cds;Parent=Msa1047150-mRNA-1 |
| chr7_2 | CDS | 7863109 | 7863182 | 7863109 | ID=Msa1047150-mRNA-1:cds;Parent=Msa1047150-mRNA-1 |
| chr7_2 | CDS | 7862976 | 7863020 | 7862976 | ID=Msa1047150-mRNA-1:cds;Parent=Msa1047150-mRNA-1 |
| chr7_2 | CDS | 7862600 | 7862777 | 7862600 | ID=Msa1047150-mRNA-1:cds;Parent=Msa1047150-mRNA-1 |
| chr7_2 | CDS | 7861941 | 7862084 | 7861941 | ID=Msa1047150-mRNA-1:cds;Parent=Msa1047150-mRNA-1 |
| chr7_2 | CDS | 7861786 | 7861851 | 7861786 | ID=Msa1047150-mRNA-1:cds;Parent=Msa1047150-mRNA-1 |
| chr7_2 | CDS | 7861651 | 7861698 | 7861651 | ID=Msa1047150-mRNA-1:cds;Parent=Msa1047150-mRNA-1 |
| chr7_2 | CDS | 7861470 | 7861573 | 7861470 | ID=Msa1047150-mRNA-1:cds;Parent=Msa1047150-mRNA-1 |
| chr7_2 | CDS | 7861047 | 7861125 | 7861047 | ID=Msa1047150-mRNA-1:cds;Parent=Msa1047150-mRNA-1 |
| chr7_2 | CDS | 7860607 | 7860723 | 7860607 | ID=Msa1047150-mRNA-1:cds;Parent=Msa1047150-mRNA-1 |
| chr7_2 | three_prime_UTR | 7860316 | 7860606 | 7860316 | ID=Msa1047150-mRNA-1:three_prime_utr;Parent=Msa1047150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
