Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1186570 | XP_003627843.1 | 71.605 | 243 | 18 | 1 | 1 | 243 | 1 | 192 | 6.14e-116 | 339 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1186570 | sp|Q9LK88|NQR_ARATH | 58.824 | 238 | 47 | 1 | 5 | 242 | 10 | 196 | 6.31e-89 | 264 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1186570 | B7FMX0 | 71.605 | 243 | 18 | 1 | 1 | 243 | 1 | 192 | 2.93e-116 | 339 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa1186570 | 0.800748 | 1.246078e-48 | -8.615850e-47 |
| Msa0020630 | Msa1186570 | 0.824055 | 9.930748e-54 | -8.615850e-47 |
| Msa0021740 | Msa1186570 | 0.821218 | 4.537867e-53 | -8.615850e-47 |
| Msa0038350 | Msa1186570 | -0.852909 | 3.386330e-61 | -8.615850e-47 |
| Msa0640380 | Msa1186570 | 0.810731 | 9.963069e-51 | -8.615850e-47 |
| Msa0647450 | Msa1186570 | -0.806484 | 8.044172e-50 | -8.615850e-47 |
| Msa0655990 | Msa1186570 | -0.803968 | 2.706103e-49 | -8.615850e-47 |
| Msa0657670 | Msa1186570 | 0.805512 | 1.287795e-49 | -8.615850e-47 |
| Msa0722930 | Msa1186570 | 0.805269 | 1.448405e-49 | -8.615850e-47 |
| Msa0723140 | Msa1186570 | 0.804321 | 2.284675e-49 | -8.615850e-47 |
| Msa0723210 | Msa1186570 | 0.809592 | 1.753541e-50 | -8.615850e-47 |
| Msa0792510 | Msa1186570 | 0.822604 | 2.167627e-53 | -8.615850e-47 |
| Msa0828570 | Msa1186570 | 0.821742 | 3.434325e-53 | -8.615850e-47 |
| Msa0158020 | Msa1186570 | 0.819321 | 1.235173e-52 | -8.615850e-47 |
| Msa0159750 | Msa1186570 | 0.820977 | 5.155646e-53 | -8.615850e-47 |
| Msa0185640 | Msa1186570 | -0.855090 | 7.965657e-62 | -8.615850e-47 |
| Msa0200950 | Msa1186570 | -0.811225 | 7.788444e-51 | -8.615850e-47 |
| Msa0226250 | Msa1186570 | 0.806684 | 7.299825e-50 | -8.615850e-47 |
| Msa0412540 | Msa1186570 | 0.800860 | 1.182118e-48 | -8.615850e-47 |
| Msa0412970 | Msa1186570 | 0.828189 | 1.032544e-54 | -8.615850e-47 |
| Msa0980440 | Msa1186570 | 0.807289 | 5.434943e-50 | -8.615850e-47 |
| Msa1016670 | Msa1186570 | 0.828414 | 9.110258e-55 | -8.615850e-47 |
| Msa1036390 | Msa1186570 | 0.845230 | 4.624388e-59 | -8.615850e-47 |
| Msa1046610 | Msa1186570 | 0.816325 | 5.860562e-52 | -8.615850e-47 |
| Msa1047150 | Msa1186570 | -0.802292 | 6.012915e-49 | -8.615850e-47 |
| Msa1076680 | Msa1186570 | 0.838451 | 2.853832e-57 | -8.615850e-47 |
| Msa1087530 | Msa1186570 | 0.805105 | 1.567771e-49 | -8.615850e-47 |
| Msa0258670 | Msa1186570 | -0.832917 | 7.189664e-56 | -8.615850e-47 |
| Msa0288330 | Msa1186570 | 0.803957 | 2.720852e-49 | -8.615850e-47 |
| Msa0296160 | Msa1186570 | 0.814836 | 1.257644e-51 | -8.615850e-47 |
| Msa0298940 | Msa1186570 | 0.800904 | 1.157683e-48 | -8.615850e-47 |
| Msa0299010 | Msa1186570 | -0.801408 | 9.130121e-49 | -8.615850e-47 |
| Msa0334570 | Msa1186570 | 0.810946 | 8.951381e-51 | -8.615850e-47 |
| Msa0342340 | Msa1186570 | -0.857641 | 1.420923e-62 | -8.615850e-47 |
| Msa0363460 | Msa1186570 | 0.804155 | 2.474450e-49 | -8.615850e-47 |
| Msa1108780 | Msa1186570 | 0.817517 | 3.165996e-52 | -8.615850e-47 |
| Msa1186570 | Msa1204980 | -0.854376 | 1.282968e-61 | -8.615850e-47 |
| Msa1186570 | Msa1205010 | -0.854026 | 1.618511e-61 | -8.615850e-47 |
| Msa1186570 | Msa1208340 | 0.804660 | 1.942056e-49 | -8.615850e-47 |
| Msa1186570 | Msa1254950 | 0.812254 | 4.651354e-51 | -8.615850e-47 |
| Msa1186570 | Msa1256540 | -0.856144 | 3.924759e-62 | -8.615850e-47 |
| Msa1186570 | Msa1258950 | 0.800163 | 1.639127e-48 | -8.615850e-47 |
| Msa1186570 | Msa1261470 | 0.813870 | 2.056806e-51 | -8.615850e-47 |
| Msa1186570 | Msa1295690 | 0.817872 | 2.632746e-52 | -8.615850e-47 |
| Msa1186570 | Msa1296960 | -0.861233 | 1.185078e-63 | -8.615850e-47 |
| Msa1186570 | Msa1304180 | 0.809017 | 2.328751e-50 | -8.615850e-47 |
| Msa1186570 | Msa1317710 | 0.811111 | 8.243554e-51 | -8.615850e-47 |
| Msa1186570 | Msa1329990 | 0.809324 | 2.001503e-50 | -8.615850e-47 |
| Msa1186570 | Msa1335860 | 0.808936 | 2.424364e-50 | -8.615850e-47 |
| Msa1186570 | Msa1335970 | -0.801795 | 7.607073e-49 | -8.615850e-47 |
| Msa1186570 | Msa1358960 | 0.808282 | 3.343376e-50 | -8.615850e-47 |
| Msa1186570 | Msa1371080 | -0.805493 | 1.299620e-49 | -8.615850e-47 |
| Msa1186570 | Msa1373950 | 0.824350 | 8.467217e-54 | -8.615850e-47 |
| Msa1186570 | Msa1385620 | 0.806478 | 8.069220e-50 | -8.615850e-47 |
| Msa1186570 | Msa1438270 | 0.819223 | 1.299747e-52 | -8.615850e-47 |
| Msa1186570 | Msa1447440 | 0.826780 | 2.248089e-54 | -8.615850e-47 |
| Msa1186570 | Msa1454290 | -0.824846 | 6.468266e-54 | -8.615850e-47 |
| Msa0504550 | Msa1186570 | 0.827304 | 1.684479e-54 | -8.615850e-47 |
| Msa0526640 | Msa1186570 | -0.821964 | 3.050962e-53 | -8.615850e-47 |
| Msa0540070 | Msa1186570 | 0.823297 | 1.494514e-53 | -8.615850e-47 |
| Msa0543900 | Msa1186570 | 0.813903 | 2.021958e-51 | -8.615850e-47 |
| Msa0575890 | Msa1186570 | 0.821428 | 4.059243e-53 | -8.615850e-47 |
| Msa0576990 | Msa1186570 | -0.807309 | 5.382588e-50 | -8.615850e-47 |
| Msa0599770 | Msa1186570 | 0.811774 | 5.915929e-51 | -8.615850e-47 |
| Msa0894890 | Msa1186570 | 0.803481 | 3.414859e-49 | -8.615850e-47 |
| Msa0902980 | Msa1186570 | 0.807726 | 4.391118e-50 | -8.615850e-47 |
| Msa0909710 | Msa1186570 | 0.811125 | 8.185482e-51 | -8.615850e-47 |
| Msa0938420 | Msa1186570 | 0.806979 | 6.322920e-50 | -8.615850e-47 |
| Msa0964680 | Msa1186570 | 0.802044 | 6.763080e-49 | -8.615850e-47 |
| Msa0968320 | Msa1186570 | -0.809673 | 1.684858e-50 | -8.615850e-47 |
| Msa0970050 | Msa1186570 | 0.831703 | 1.436230e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1186570 | MtrunA17_Chr8g0353131 | 71.605 | 243 | 18 | 1 | 1 | 243 | 1 | 192 | 5.65e-120 | 339 |
| Msa1186570 | MtrunA17_Chr3g0084221 | 59.336 | 241 | 47 | 1 | 3 | 243 | 2 | 191 | 4.90e-97 | 281 |
| Msa1186570 | MtrunA17_Chr3g0084161 | 56.432 | 241 | 54 | 1 | 3 | 243 | 2 | 191 | 1.18e-94 | 275 |
| Msa1186570 | MtrunA17_Chr3g0084201 | 57.261 | 241 | 51 | 2 | 3 | 243 | 2 | 190 | 1.33e-91 | 268 |
| Msa1186570 | MtrunA17_Chr3g0084191 | 49.587 | 242 | 68 | 2 | 3 | 241 | 2 | 192 | 4.44e-75 | 236 |
| Msa1186570 | MtrunA17_Chr3g0082411 | 36.697 | 109 | 23 | 2 | 51 | 159 | 1 | 63 | 8.24e-13 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1186570 | AT3G27890.1 | 58.824 | 238 | 47 | 1 | 5 | 242 | 10 | 196 | 6.41e-90 | 264 |
Find 62 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAATATCAATATGATTT+TGG | 0.116343 | 8_1:+25009740 | Msa1186570:three_prime_UTR |
| TAGTGCATTAGAATAATTTA+AGG | 0.190097 | 8_1:-25009710 | None:intergenic |
| ATTAAAGTGGCAGCTCTTTC+TGG | 0.193210 | 8_1:+25008140 | Msa1186570:CDS |
| TTTGACCAATGTGAATAATT+TGG | 0.258338 | 8_1:-25009884 | None:intergenic |
| ATATATCAAGCAGATGATTT+AGG | 0.273257 | 8_1:-25009907 | None:intergenic |
| CATCCAGACCACCAAATGTT+TGG | 0.317863 | 8_1:+25009431 | Msa1186570:CDS |
| CTTTGAAGAATGCAATTGAT+TGG | 0.350901 | 8_1:+25009407 | Msa1186570:CDS |
| AGCCCAAACATTTGGTGGTC+TGG | 0.353834 | 8_1:-25009434 | None:intergenic |
| CACCGCCACTTGCCACTCTT+CGG | 0.405683 | 8_1:+25008806 | Msa1186570:CDS |
| CTTTGCTAGCGAAGGGGCGA+CGG | 0.410161 | 8_1:-25008777 | None:intergenic |
| GCACCGGAGGAGACTTTGGC+GGG | 0.423331 | 8_1:+25009479 | Msa1186570:CDS |
| ATCCAGACCACCAAATGTTT+GGG | 0.423616 | 8_1:+25009432 | Msa1186570:CDS |
| TTTGAAGAATGCAATTGATT+GGG | 0.425883 | 8_1:+25009408 | Msa1186570:CDS |
| GCATTTACTCTAAGACTTCA+AGG | 0.439732 | 8_1:+25009676 | Msa1186570:CDS |
| TTTGCTAGCGAAGGGGCGAC+GGG | 0.451529 | 8_1:-25008776 | None:intergenic |
| ATAAGCACCGGAGGAGACTT+TGG | 0.451765 | 8_1:+25009475 | Msa1186570:CDS |
| TGGCGAAAAGCTTCAACAAC+AGG | 0.452851 | 8_1:-25008401 | None:intergenic |
| AGAGAGAACCAGCACGGATA+AGG | 0.463854 | 8_1:-25008193 | None:intergenic |
| TTTCCAGCCCAAACATTTGG+TGG | 0.464756 | 8_1:-25009439 | None:intergenic |
| CACTCAGGCCTTATCCGTGC+TGG | 0.477633 | 8_1:+25008185 | Msa1186570:CDS |
| CGGCGATTTGATTGATGAAG+AGG | 0.499893 | 8_1:+25009615 | Msa1186570:CDS |
| AGAGTGGCAAGTGGCGGTGA+AGG | 0.503838 | 8_1:-25008802 | None:intergenic |
| GCAGCAATTGAATTGAGTAA+AGG | 0.518179 | 8_1:+25008290 | Msa1186570:intron |
| AGACCACCAAATGTTTGGGC+TGG | 0.520482 | 8_1:+25009436 | Msa1186570:CDS |
| TTTGATTGATGAAGAGGCTA+AGG | 0.522697 | 8_1:+25009621 | Msa1186570:CDS |
| ATTCCCTCGATGTCCGATGC+AGG | 0.526744 | 8_1:-25008748 | None:intergenic |
| TGAAGGAGCTTTGCTAGCGA+AGG | 0.529459 | 8_1:-25008785 | None:intergenic |
| TTGAGTAAAGGAGCAATTGA+AGG | 0.530953 | 8_1:+25008302 | Msa1186570:CDS |
| CTAGCGAAGGGGCGACGGGG+TGG | 0.533018 | 8_1:-25008772 | None:intergenic |
| CAATCAATTGCATTCTTCAA+AGG | 0.536460 | 8_1:-25009406 | None:intergenic |
| AGCACCGGAGGAGACTTTGG+CGG | 0.558481 | 8_1:+25009478 | Msa1186570:CDS |
| ACCGGAGGAGACTTTGGCGG+GGG | 0.563200 | 8_1:+25009481 | Msa1186570:CDS |
| GAAGGAGCTTTGCTAGCGAA+GGG | 0.564828 | 8_1:-25008784 | None:intergenic |
| CAATATCATCTACGCCAAGT+TGG | 0.566210 | 8_1:+25009511 | Msa1186570:CDS |
| TCAAGATCAGTGTTATACAT+TGG | 0.571274 | 8_1:-25008359 | None:intergenic |
| TGAGACCAAATTATTCACAT+TGG | 0.575526 | 8_1:+25009879 | Msa1186570:three_prime_UTR |
| TAACACTGATCTTGAAAACA+AGG | 0.588794 | 8_1:+25008367 | Msa1186570:CDS |
| GCAGCTGCAATCATAAGCAC+CGG | 0.589393 | 8_1:+25009463 | Msa1186570:CDS |
| TTACAACAATACACCTGCAT+CGG | 0.591606 | 8_1:+25008735 | Msa1186570:CDS |
| GAGTATAATTACTCTCTCAC+AGG | 0.592007 | 8_1:+25008464 | Msa1186570:CDS |
| AGAAAAGCTTCGTACCACTC+AGG | 0.601969 | 8_1:+25008170 | Msa1186570:CDS |
| CGAAAAGCTTCAACAACAGG+TGG | 0.602230 | 8_1:-25008398 | None:intergenic |
| CACCGGAGGAGACTTTGGCG+GGG | 0.606035 | 8_1:+25009480 | Msa1186570:CDS |
| GATCGATATACACTCCAACT+TGG | 0.607122 | 8_1:-25009525 | None:intergenic |
| CCTGCAAAATTCAACGATGA+CGG | 0.608437 | 8_1:+25009595 | Msa1186570:CDS |
| GTGAGAGAGTAATTATACTC+AGG | 0.609716 | 8_1:-25008461 | None:intergenic |
| GGCAGCAGCAGTGATTAAAG+TGG | 0.626013 | 8_1:+25008127 | Msa1186570:CDS |
| ACAGAACACTAGCTAAGTCA+TGG | 0.629230 | 8_1:+25008106 | Msa1186570:exon |
| TACACCTGCATCGGACATCG+AGG | 0.629295 | 8_1:+25008744 | Msa1186570:CDS |
| TTGCTAGCGAAGGGGCGACG+GGG | 0.642966 | 8_1:-25008775 | None:intergenic |
| CACCGAAGAGTGGCAAGTGG+CGG | 0.645476 | 8_1:-25008808 | None:intergenic |
| CATATATAGACACCGAAGAG+TGG | 0.645497 | 8_1:-25008818 | None:intergenic |
| AATGCTCTTAGAAAGAACTC+AGG | 0.646361 | 8_1:-25009565 | None:intergenic |
| GAAGACAGAGAGAACCAGCA+CGG | 0.651963 | 8_1:-25008199 | None:intergenic |
| TATCAGCTTGAAGAATCTTG+TGG | 0.652286 | 8_1:-25008421 | None:intergenic |
| ACACCTGCATCGGACATCGA+GGG | 0.656602 | 8_1:+25008745 | Msa1186570:CDS |
| TATTAATCAACATCTACGTG+AGG | 0.662746 | 8_1:-25009839 | None:intergenic |
| AAGGAGCTTTGCTAGCGAAG+GGG | 0.669902 | 8_1:-25008783 | None:intergenic |
| AACACTGATCTTGAAAACAA+GGG | 0.673165 | 8_1:+25008368 | Msa1186570:CDS |
| GCTGCAATCATAAGCACCGG+AGG | 0.686469 | 8_1:+25009466 | Msa1186570:CDS |
| AGACACCGAAGAGTGGCAAG+TGG | 0.689784 | 8_1:-25008811 | None:intergenic |
| CAGCACGGATAAGGCCTGAG+TGG | 0.702973 | 8_1:-25008184 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATACTTAACAATTTTTATAA+TGG | + | chr8_1:25008845-25008864 | Msa1186570:intron | 10.0% |
| !!! | TAATTCTTTTTATTACAAAT+TGG | - | chr8_1:25009320-25009339 | None:intergenic | 10.0% |
| !!! | ATACTTAACAATTTTTATAA+TGG | + | chr8_1:25008845-25008864 | Msa1186570:intron | 10.0% |
| !!! | TAATTCTTTTTATTACAAAT+TGG | - | chr8_1:25009320-25009339 | None:intergenic | 10.0% |
| !!! | TGATCTAGATTTTATTTTTT+TGG | + | chr8_1:25008515-25008534 | Msa1186570:intron | 15.0% |
| !!! | TTCTTTTATTCTTCTATTAT+TGG | - | chr8_1:25008553-25008572 | None:intergenic | 15.0% |
| !!! | ATATTTCTTTTGATGAATTA+AGG | + | chr8_1:25008672-25008691 | Msa1186570:intron | 15.0% |
| !! | TTTATACCATTTAAATACTA+CGG | - | chr8_1:25009133-25009152 | None:intergenic | 15.0% |
| !!! | TATATTTTTTCTTTTGAATC+AGG | + | chr8_1:25009243-25009262 | Msa1186570:intron | 15.0% |
| !!! | TTCAAATATCAATATGATTT+TGG | + | chr8_1:25009740-25009759 | Msa1186570:three_prime_UTR | 15.0% |
| !!! | TGATCTAGATTTTATTTTTT+TGG | + | chr8_1:25008515-25008534 | Msa1186570:intron | 15.0% |
| !!! | TTCTTTTATTCTTCTATTAT+TGG | - | chr8_1:25008553-25008572 | None:intergenic | 15.0% |
| !!! | ATATTTCTTTTGATGAATTA+AGG | + | chr8_1:25008672-25008691 | Msa1186570:intron | 15.0% |
| !! | TTTATACCATTTAAATACTA+CGG | - | chr8_1:25009133-25009152 | None:intergenic | 15.0% |
| !!! | TATATTTTTTCTTTTGAATC+AGG | + | chr8_1:25009243-25009262 | Msa1186570:intron | 15.0% |
| !!! | TTCAAATATCAATATGATTT+TGG | + | chr8_1:25009740-25009759 | Msa1186570:three_prime_UTR | 15.0% |
| !!! | CTTTGAAATTGTAATAGTTT+GGG | + | chr8_1:25008888-25008907 | Msa1186570:intron | 20.0% |
| !!! | TTTGAAATTGTAATAGTTTG+GGG | + | chr8_1:25008889-25008908 | Msa1186570:intron | 20.0% |
| !!! | TCTTTTTATTACAAATTGGT+CGG | - | chr8_1:25009316-25009335 | None:intergenic | 20.0% |
| !! | TAGTGCATTAGAATAATTTA+AGG | - | chr8_1:25009713-25009732 | None:intergenic | 20.0% |
| !!! | TTGATATATACTGACATTTT+TGG | + | chr8_1:25009921-25009940 | Msa1186570:three_prime_UTR | 20.0% |
| !!! | TTTTTGGATTCAAGATATAT+TGG | + | chr8_1:25009937-25009956 | Msa1186570:three_prime_UTR | 20.0% |
| !!! | CTTTGAAATTGTAATAGTTT+GGG | + | chr8_1:25008888-25008907 | Msa1186570:intron | 20.0% |
| !!! | TTTGAAATTGTAATAGTTTG+GGG | + | chr8_1:25008889-25008908 | Msa1186570:intron | 20.0% |
| !!! | TCTTTTTATTACAAATTGGT+CGG | - | chr8_1:25009316-25009335 | None:intergenic | 20.0% |
| !! | TAGTGCATTAGAATAATTTA+AGG | - | chr8_1:25009713-25009732 | None:intergenic | 20.0% |
| !!! | TTGATATATACTGACATTTT+TGG | + | chr8_1:25009921-25009940 | Msa1186570:three_prime_UTR | 20.0% |
| !!! | TTTTTGGATTCAAGATATAT+TGG | + | chr8_1:25009937-25009956 | Msa1186570:three_prime_UTR | 20.0% |
| ! | TTCATCAAAAGAAATATACG+TGG | - | chr8_1:25008669-25008688 | None:intergenic | 25.0% |
| ! | CCAAACTATTACAATTTCAA+AGG | - | chr8_1:25008890-25008909 | None:intergenic | 25.0% |
| !!! | CCTTTGAAATTGTAATAGTT+TGG | + | chr8_1:25008887-25008906 | Msa1186570:intron | 25.0% |
| ! | TAAATGGTATAAAGAAACTG+CGG | + | chr8_1:25009140-25009159 | Msa1186570:intron | 25.0% |
| ! | ACACAAAATAAAGATGAAGA+TGG | - | chr8_1:25009380-25009399 | None:intergenic | 25.0% |
| ! | TTTGAAGAATGCAATTGATT+GGG | + | chr8_1:25009408-25009427 | Msa1186570:CDS | 25.0% |
| !! | ATCAATATGATTTTGGACTT+TGG | + | chr8_1:25009747-25009766 | Msa1186570:three_prime_UTR | 25.0% |
| !! | GAGGAAATAATACATTTTCA+AGG | - | chr8_1:25009823-25009842 | None:intergenic | 25.0% |
| ! | TTTGACCAATGTGAATAATT+TGG | - | chr8_1:25009887-25009906 | None:intergenic | 25.0% |
| ! | ATATATCAAGCAGATGATTT+AGG | - | chr8_1:25009910-25009929 | None:intergenic | 25.0% |
| ! | TTCATCAAAAGAAATATACG+TGG | - | chr8_1:25008669-25008688 | None:intergenic | 25.0% |
| ! | CCAAACTATTACAATTTCAA+AGG | - | chr8_1:25008890-25008909 | None:intergenic | 25.0% |
| !!! | CCTTTGAAATTGTAATAGTT+TGG | + | chr8_1:25008887-25008906 | Msa1186570:intron | 25.0% |
| ! | TAAATGGTATAAAGAAACTG+CGG | + | chr8_1:25009140-25009159 | Msa1186570:intron | 25.0% |
| ! | ACACAAAATAAAGATGAAGA+TGG | - | chr8_1:25009380-25009399 | None:intergenic | 25.0% |
| ! | TTTGAAGAATGCAATTGATT+GGG | + | chr8_1:25009408-25009427 | Msa1186570:CDS | 25.0% |
| !! | ATCAATATGATTTTGGACTT+TGG | + | chr8_1:25009747-25009766 | Msa1186570:three_prime_UTR | 25.0% |
| !! | GAGGAAATAATACATTTTCA+AGG | - | chr8_1:25009823-25009842 | None:intergenic | 25.0% |
| ! | TTTGACCAATGTGAATAATT+TGG | - | chr8_1:25009887-25009906 | None:intergenic | 25.0% |
| ! | ATATATCAAGCAGATGATTT+AGG | - | chr8_1:25009910-25009929 | None:intergenic | 25.0% |
| GTTGTAGTATTCAATTTCCA+TGG | + | chr8_1:25008255-25008274 | Msa1186570:intron | 30.0% | |
| TCAAGATCAGTGTTATACAT+TGG | - | chr8_1:25008362-25008381 | None:intergenic | 30.0% | |
| TAACACTGATCTTGAAAACA+AGG | + | chr8_1:25008367-25008386 | Msa1186570:CDS | 30.0% | |
| AACACTGATCTTGAAAACAA+GGG | + | chr8_1:25008368-25008387 | Msa1186570:CDS | 30.0% | |
| TAGAGCCAATATATAGTACT+TGG | + | chr8_1:25008705-25008724 | Msa1186570:intron | 30.0% | |
| AGAGCCAATATATAGTACTT+GGG | + | chr8_1:25008706-25008725 | Msa1186570:intron | 30.0% | |
| TGATAGTCTCAACATTTCAA+TGG | + | chr8_1:25008923-25008942 | Msa1186570:intron | 30.0% | |
| AAATTGAAAGAACCCACAAA+CGG | + | chr8_1:25009048-25009067 | Msa1186570:intron | 30.0% | |
| TCTGAACCGTAGTATTTAAA+TGG | + | chr8_1:25009124-25009143 | Msa1186570:intron | 30.0% | |
| CAATCAATTGCATTCTTCAA+AGG | - | chr8_1:25009409-25009428 | None:intergenic | 30.0% | |
| ! | CTTTGAAGAATGCAATTGAT+TGG | + | chr8_1:25009407-25009426 | Msa1186570:CDS | 30.0% |
| ! | GCAAGTTCTTTTATATTTGC+AGG | + | chr8_1:25009654-25009673 | Msa1186570:CDS | 30.0% |
| TATTAATCAACATCTACGTG+AGG | - | chr8_1:25009842-25009861 | None:intergenic | 30.0% | |
| TGAGACCAAATTATTCACAT+TGG | + | chr8_1:25009879-25009898 | Msa1186570:three_prime_UTR | 30.0% | |
| GTTGTAGTATTCAATTTCCA+TGG | + | chr8_1:25008255-25008274 | Msa1186570:intron | 30.0% | |
| TCAAGATCAGTGTTATACAT+TGG | - | chr8_1:25008362-25008381 | None:intergenic | 30.0% | |
| TAACACTGATCTTGAAAACA+AGG | + | chr8_1:25008367-25008386 | Msa1186570:CDS | 30.0% | |
| AACACTGATCTTGAAAACAA+GGG | + | chr8_1:25008368-25008387 | Msa1186570:CDS | 30.0% | |
| TAGAGCCAATATATAGTACT+TGG | + | chr8_1:25008705-25008724 | Msa1186570:intron | 30.0% | |
| AGAGCCAATATATAGTACTT+GGG | + | chr8_1:25008706-25008725 | Msa1186570:intron | 30.0% | |
| TGATAGTCTCAACATTTCAA+TGG | + | chr8_1:25008923-25008942 | Msa1186570:intron | 30.0% | |
| AAATTGAAAGAACCCACAAA+CGG | + | chr8_1:25009048-25009067 | Msa1186570:intron | 30.0% | |
| TCTGAACCGTAGTATTTAAA+TGG | + | chr8_1:25009124-25009143 | Msa1186570:intron | 30.0% | |
| CAATCAATTGCATTCTTCAA+AGG | - | chr8_1:25009409-25009428 | None:intergenic | 30.0% | |
| ! | CTTTGAAGAATGCAATTGAT+TGG | + | chr8_1:25009407-25009426 | Msa1186570:CDS | 30.0% |
| ! | GCAAGTTCTTTTATATTTGC+AGG | + | chr8_1:25009654-25009673 | Msa1186570:CDS | 30.0% |
| TATTAATCAACATCTACGTG+AGG | - | chr8_1:25009842-25009861 | None:intergenic | 30.0% | |
| TGAGACCAAATTATTCACAT+TGG | + | chr8_1:25009879-25009898 | Msa1186570:three_prime_UTR | 30.0% | |
| !! | TCTGATCTTTTCAGGAGATT+AGG | - | chr8_1:25008074-25008093 | None:intergenic | 35.0% |
| ! | TTCTTGTGTCTGATCTTTTC+AGG | - | chr8_1:25008082-25008101 | None:intergenic | 35.0% |
| GCAGCAATTGAATTGAGTAA+AGG | + | chr8_1:25008290-25008309 | Msa1186570:intron | 35.0% | |
| TTGAGTAAAGGAGCAATTGA+AGG | + | chr8_1:25008302-25008321 | Msa1186570:CDS | 35.0% | |
| TATCAGCTTGAAGAATCTTG+TGG | - | chr8_1:25008424-25008443 | None:intergenic | 35.0% | |
| GTGAGAGAGTAATTATACTC+AGG | - | chr8_1:25008464-25008483 | None:intergenic | 35.0% | |
| GAGTATAATTACTCTCTCAC+AGG | + | chr8_1:25008464-25008483 | Msa1186570:CDS | 35.0% | |
| TATATAGTCGCAAAGGTAGT+AGG | - | chr8_1:25008635-25008654 | None:intergenic | 35.0% | |
| TAGTTGCTATATAGTCGCAA+AGG | - | chr8_1:25008642-25008661 | None:intergenic | 35.0% | |
| TGGACCCAAGTACTATATAT+TGG | - | chr8_1:25008713-25008732 | None:intergenic | 35.0% | |
| TTACAACAATACACCTGCAT+CGG | + | chr8_1:25008735-25008754 | Msa1186570:CDS | 35.0% | |
| !! | TTGTAGCTTTGAAACGATCA+TGG | - | chr8_1:25009022-25009041 | None:intergenic | 35.0% |
| GGACAATTCCAATGAAAAAG+CGG | + | chr8_1:25009072-25009091 | Msa1186570:intron | 35.0% | |
| AATTCCAATGAAAAAGCGGT+TGG | + | chr8_1:25009076-25009095 | Msa1186570:intron | 35.0% | |
| !!! | ATATCCAACCGCTTTTTCAT+TGG | - | chr8_1:25009083-25009102 | None:intergenic | 35.0% |
| AATGAAAAAGCGGTTGGATA+TGG | + | chr8_1:25009082-25009101 | Msa1186570:intron | 35.0% | |
| CTATATCTCCGAATGTAGAA+TGG | - | chr8_1:25009166-25009185 | None:intergenic | 35.0% | |
| TTCGGAGATATAGACACAAA+AGG | + | chr8_1:25009173-25009192 | Msa1186570:intron | 35.0% | |
| GAATGTTTGATGAGGAAGTT+CGG | - | chr8_1:25009199-25009218 | None:intergenic | 35.0% | |
| AGAATGCAGAATGTTTGATG+AGG | - | chr8_1:25009207-25009226 | None:intergenic | 35.0% | |
| AATGCTCTTAGAAAGAACTC+AGG | - | chr8_1:25009568-25009587 | None:intergenic | 35.0% | |
| TTTGATTGATGAAGAGGCTA+AGG | + | chr8_1:25009621-25009640 | Msa1186570:CDS | 35.0% | |
| !! | GCATTTACTCTAAGACTTCA+AGG | + | chr8_1:25009676-25009695 | Msa1186570:CDS | 35.0% |
| !! | TCTGATCTTTTCAGGAGATT+AGG | - | chr8_1:25008074-25008093 | None:intergenic | 35.0% |
| ! | TTCTTGTGTCTGATCTTTTC+AGG | - | chr8_1:25008082-25008101 | None:intergenic | 35.0% |
| GCAGCAATTGAATTGAGTAA+AGG | + | chr8_1:25008290-25008309 | Msa1186570:intron | 35.0% | |
| TTGAGTAAAGGAGCAATTGA+AGG | + | chr8_1:25008302-25008321 | Msa1186570:CDS | 35.0% | |
| TATCAGCTTGAAGAATCTTG+TGG | - | chr8_1:25008424-25008443 | None:intergenic | 35.0% | |
| GTGAGAGAGTAATTATACTC+AGG | - | chr8_1:25008464-25008483 | None:intergenic | 35.0% | |
| GAGTATAATTACTCTCTCAC+AGG | + | chr8_1:25008464-25008483 | Msa1186570:CDS | 35.0% | |
| TATATAGTCGCAAAGGTAGT+AGG | - | chr8_1:25008635-25008654 | None:intergenic | 35.0% | |
| TAGTTGCTATATAGTCGCAA+AGG | - | chr8_1:25008642-25008661 | None:intergenic | 35.0% | |
| TGGACCCAAGTACTATATAT+TGG | - | chr8_1:25008713-25008732 | None:intergenic | 35.0% | |
| TTACAACAATACACCTGCAT+CGG | + | chr8_1:25008735-25008754 | Msa1186570:CDS | 35.0% | |
| !! | TTGTAGCTTTGAAACGATCA+TGG | - | chr8_1:25009022-25009041 | None:intergenic | 35.0% |
| GGACAATTCCAATGAAAAAG+CGG | + | chr8_1:25009072-25009091 | Msa1186570:intron | 35.0% | |
| AATTCCAATGAAAAAGCGGT+TGG | + | chr8_1:25009076-25009095 | Msa1186570:intron | 35.0% | |
| !!! | ATATCCAACCGCTTTTTCAT+TGG | - | chr8_1:25009083-25009102 | None:intergenic | 35.0% |
| AATGAAAAAGCGGTTGGATA+TGG | + | chr8_1:25009082-25009101 | Msa1186570:intron | 35.0% | |
| CTATATCTCCGAATGTAGAA+TGG | - | chr8_1:25009166-25009185 | None:intergenic | 35.0% | |
| TTCGGAGATATAGACACAAA+AGG | + | chr8_1:25009173-25009192 | Msa1186570:intron | 35.0% | |
| GAATGTTTGATGAGGAAGTT+CGG | - | chr8_1:25009199-25009218 | None:intergenic | 35.0% | |
| AGAATGCAGAATGTTTGATG+AGG | - | chr8_1:25009207-25009226 | None:intergenic | 35.0% | |
| AATGCTCTTAGAAAGAACTC+AGG | - | chr8_1:25009568-25009587 | None:intergenic | 35.0% | |
| TTTGATTGATGAAGAGGCTA+AGG | + | chr8_1:25009621-25009640 | Msa1186570:CDS | 35.0% | |
| !! | GCATTTACTCTAAGACTTCA+AGG | + | chr8_1:25009676-25009695 | Msa1186570:CDS | 35.0% |
| ACAGAACACTAGCTAAGTCA+TGG | + | chr8_1:25008106-25008125 | Msa1186570:exon | 40.0% | |
| ATTAAAGTGGCAGCTCTTTC+TGG | + | chr8_1:25008140-25008159 | Msa1186570:CDS | 40.0% | |
| GCAAAGGTAGTAGGTATCAT+TGG | - | chr8_1:25008626-25008645 | None:intergenic | 40.0% | |
| GCAGGTGTATTGTTGTAATC+TGG | - | chr8_1:25008733-25008752 | None:intergenic | 40.0% | |
| CATATATAGACACCGAAGAG+TGG | - | chr8_1:25008821-25008840 | None:intergenic | 40.0% | |
| AGCGCTAAAGCTATCATGTA+GGG | - | chr8_1:25008951-25008970 | None:intergenic | 40.0% | |
| AAGCGCTAAAGCTATCATGT+AGG | - | chr8_1:25008952-25008971 | None:intergenic | 40.0% | |
| !! | TGATAGCTTTAGCGCTTGTT+TGG | + | chr8_1:25008955-25008974 | Msa1186570:intron | 40.0% |
| !! | TAGCTTTGAAACGATCATGG+TGG | - | chr8_1:25009019-25009038 | None:intergenic | 40.0% |
| ATCCAGACCACCAAATGTTT+GGG | + | chr8_1:25009432-25009451 | Msa1186570:CDS | 40.0% | |
| CAATATCATCTACGCCAAGT+TGG | + | chr8_1:25009511-25009530 | Msa1186570:CDS | 40.0% | |
| GATCGATATACACTCCAACT+TGG | - | chr8_1:25009528-25009547 | None:intergenic | 40.0% | |
| ! | TCATCGTTGAATTTTGCAGG+TGG | - | chr8_1:25009595-25009614 | None:intergenic | 40.0% |
| CCTGCAAAATTCAACGATGA+CGG | + | chr8_1:25009595-25009614 | Msa1186570:CDS | 40.0% | |
| ACAGAACACTAGCTAAGTCA+TGG | + | chr8_1:25008106-25008125 | Msa1186570:exon | 40.0% | |
| ATTAAAGTGGCAGCTCTTTC+TGG | + | chr8_1:25008140-25008159 | Msa1186570:CDS | 40.0% | |
| GCAAAGGTAGTAGGTATCAT+TGG | - | chr8_1:25008626-25008645 | None:intergenic | 40.0% | |
| GCAGGTGTATTGTTGTAATC+TGG | - | chr8_1:25008733-25008752 | None:intergenic | 40.0% | |
| CATATATAGACACCGAAGAG+TGG | - | chr8_1:25008821-25008840 | None:intergenic | 40.0% | |
| AGCGCTAAAGCTATCATGTA+GGG | - | chr8_1:25008951-25008970 | None:intergenic | 40.0% | |
| AAGCGCTAAAGCTATCATGT+AGG | - | chr8_1:25008952-25008971 | None:intergenic | 40.0% | |
| !! | TGATAGCTTTAGCGCTTGTT+TGG | + | chr8_1:25008955-25008974 | Msa1186570:intron | 40.0% |
| !! | TAGCTTTGAAACGATCATGG+TGG | - | chr8_1:25009019-25009038 | None:intergenic | 40.0% |
| ATCCAGACCACCAAATGTTT+GGG | + | chr8_1:25009432-25009451 | Msa1186570:CDS | 40.0% | |
| CAATATCATCTACGCCAAGT+TGG | + | chr8_1:25009511-25009530 | Msa1186570:CDS | 40.0% | |
| GATCGATATACACTCCAACT+TGG | - | chr8_1:25009528-25009547 | None:intergenic | 40.0% | |
| ! | TCATCGTTGAATTTTGCAGG+TGG | - | chr8_1:25009595-25009614 | None:intergenic | 40.0% |
| CCTGCAAAATTCAACGATGA+CGG | + | chr8_1:25009595-25009614 | Msa1186570:CDS | 40.0% | |
| ! | GTGGTACGAAGCTTTTCTGA+GGG | - | chr8_1:25008168-25008187 | None:intergenic | 45.0% |
| ! | AGTGGTACGAAGCTTTTCTG+AGG | - | chr8_1:25008169-25008188 | None:intergenic | 45.0% |
| AGAAAAGCTTCGTACCACTC+AGG | + | chr8_1:25008170-25008189 | Msa1186570:CDS | 45.0% | |
| GCTGCAATCATCATCAACCA+TGG | - | chr8_1:25008275-25008294 | None:intergenic | 45.0% | |
| CGAAAAGCTTCAACAACAGG+TGG | - | chr8_1:25008401-25008420 | None:intergenic | 45.0% | |
| TGGCGAAAAGCTTCAACAAC+AGG | - | chr8_1:25008404-25008423 | None:intergenic | 45.0% | |
| ! | CGATCATGGTGGAAAGTCAT+TGG | - | chr8_1:25009008-25009027 | None:intergenic | 45.0% |
| TTGAAAGAACCCACAAACGG+TGG | + | chr8_1:25009051-25009070 | Msa1186570:intron | 45.0% | |
| TGGAATTGTCCACCGTTTGT+GGG | - | chr8_1:25009063-25009082 | None:intergenic | 45.0% | |
| TTGGAATTGTCCACCGTTTG+TGG | - | chr8_1:25009064-25009083 | None:intergenic | 45.0% | |
| AACTGCGGCCATTCTACATT+CGG | + | chr8_1:25009155-25009174 | Msa1186570:intron | 45.0% | |
| CATCCAGACCACCAAATGTT+TGG | + | chr8_1:25009431-25009450 | Msa1186570:CDS | 45.0% | |
| TTTCCAGCCCAAACATTTGG+TGG | - | chr8_1:25009442-25009461 | None:intergenic | 45.0% | |
| ! | GCTTTTCCAGCCCAAACATT+TGG | - | chr8_1:25009445-25009464 | None:intergenic | 45.0% |
| ! | CCGTCATCGTTGAATTTTGC+AGG | - | chr8_1:25009598-25009617 | None:intergenic | 45.0% |
| CGGCGATTTGATTGATGAAG+AGG | + | chr8_1:25009615-25009634 | Msa1186570:CDS | 45.0% | |
| ! | GTGGTACGAAGCTTTTCTGA+GGG | - | chr8_1:25008168-25008187 | None:intergenic | 45.0% |
| ! | AGTGGTACGAAGCTTTTCTG+AGG | - | chr8_1:25008169-25008188 | None:intergenic | 45.0% |
| AGAAAAGCTTCGTACCACTC+AGG | + | chr8_1:25008170-25008189 | Msa1186570:CDS | 45.0% | |
| GCTGCAATCATCATCAACCA+TGG | - | chr8_1:25008275-25008294 | None:intergenic | 45.0% | |
| CGAAAAGCTTCAACAACAGG+TGG | - | chr8_1:25008401-25008420 | None:intergenic | 45.0% | |
| TGGCGAAAAGCTTCAACAAC+AGG | - | chr8_1:25008404-25008423 | None:intergenic | 45.0% | |
| ! | CGATCATGGTGGAAAGTCAT+TGG | - | chr8_1:25009008-25009027 | None:intergenic | 45.0% |
| TTGAAAGAACCCACAAACGG+TGG | + | chr8_1:25009051-25009070 | Msa1186570:intron | 45.0% | |
| TGGAATTGTCCACCGTTTGT+GGG | - | chr8_1:25009063-25009082 | None:intergenic | 45.0% | |
| TTGGAATTGTCCACCGTTTG+TGG | - | chr8_1:25009064-25009083 | None:intergenic | 45.0% | |
| AACTGCGGCCATTCTACATT+CGG | + | chr8_1:25009155-25009174 | Msa1186570:intron | 45.0% | |
| CATCCAGACCACCAAATGTT+TGG | + | chr8_1:25009431-25009450 | Msa1186570:CDS | 45.0% | |
| TTTCCAGCCCAAACATTTGG+TGG | - | chr8_1:25009442-25009461 | None:intergenic | 45.0% | |
| ! | GCTTTTCCAGCCCAAACATT+TGG | - | chr8_1:25009445-25009464 | None:intergenic | 45.0% |
| ! | CCGTCATCGTTGAATTTTGC+AGG | - | chr8_1:25009598-25009617 | None:intergenic | 45.0% |
| CGGCGATTTGATTGATGAAG+AGG | + | chr8_1:25009615-25009634 | Msa1186570:CDS | 45.0% | |
| GGCAGCAGCAGTGATTAAAG+TGG | + | chr8_1:25008127-25008146 | Msa1186570:CDS | 50.0% | |
| AGAGAGAACCAGCACGGATA+AGG | - | chr8_1:25008196-25008215 | None:intergenic | 50.0% | |
| GAAGACAGAGAGAACCAGCA+CGG | - | chr8_1:25008202-25008221 | None:intergenic | 50.0% | |
| AAGGAGCTTTGCTAGCGAAG+GGG | - | chr8_1:25008786-25008805 | None:intergenic | 50.0% | |
| GAAGGAGCTTTGCTAGCGAA+GGG | - | chr8_1:25008787-25008806 | None:intergenic | 50.0% | |
| TGAAGGAGCTTTGCTAGCGA+AGG | - | chr8_1:25008788-25008807 | None:intergenic | 50.0% | |
| !! | GCGCTTGTTTGGTAATGCGT+AGG | + | chr8_1:25008966-25008985 | Msa1186570:intron | 50.0% |
| AAAGCGGTTGGATATGGCTC+AGG | + | chr8_1:25009088-25009107 | Msa1186570:intron | 50.0% | |
| AAGCGGTTGGATATGGCTCA+GGG | + | chr8_1:25009089-25009108 | Msa1186570:intron | 50.0% | |
| ! | AGCCCAAACATTTGGTGGTC+TGG | - | chr8_1:25009437-25009456 | None:intergenic | 50.0% |
| AGACCACCAAATGTTTGGGC+TGG | + | chr8_1:25009436-25009455 | Msa1186570:CDS | 50.0% | |
| GCAGCTGCAATCATAAGCAC+CGG | + | chr8_1:25009463-25009482 | Msa1186570:CDS | 50.0% | |
| !! | ATAAGCACCGGAGGAGACTT+TGG | + | chr8_1:25009475-25009494 | Msa1186570:CDS | 50.0% |
| GGCAGCAGCAGTGATTAAAG+TGG | + | chr8_1:25008127-25008146 | Msa1186570:CDS | 50.0% | |
| AGAGAGAACCAGCACGGATA+AGG | - | chr8_1:25008196-25008215 | None:intergenic | 50.0% | |
| GAAGACAGAGAGAACCAGCA+CGG | - | chr8_1:25008202-25008221 | None:intergenic | 50.0% | |
| AAGGAGCTTTGCTAGCGAAG+GGG | - | chr8_1:25008786-25008805 | None:intergenic | 50.0% | |
| GAAGGAGCTTTGCTAGCGAA+GGG | - | chr8_1:25008787-25008806 | None:intergenic | 50.0% | |
| TGAAGGAGCTTTGCTAGCGA+AGG | - | chr8_1:25008788-25008807 | None:intergenic | 50.0% | |
| !! | GCGCTTGTTTGGTAATGCGT+AGG | + | chr8_1:25008966-25008985 | Msa1186570:intron | 50.0% |
| AAAGCGGTTGGATATGGCTC+AGG | + | chr8_1:25009088-25009107 | Msa1186570:intron | 50.0% | |
| AAGCGGTTGGATATGGCTCA+GGG | + | chr8_1:25009089-25009108 | Msa1186570:intron | 50.0% | |
| ! | AGCCCAAACATTTGGTGGTC+TGG | - | chr8_1:25009437-25009456 | None:intergenic | 50.0% |
| AGACCACCAAATGTTTGGGC+TGG | + | chr8_1:25009436-25009455 | Msa1186570:CDS | 50.0% | |
| GCAGCTGCAATCATAAGCAC+CGG | + | chr8_1:25009463-25009482 | Msa1186570:CDS | 50.0% | |
| !! | ATAAGCACCGGAGGAGACTT+TGG | + | chr8_1:25009475-25009494 | Msa1186570:CDS | 50.0% |
| TACACCTGCATCGGACATCG+AGG | + | chr8_1:25008744-25008763 | Msa1186570:CDS | 55.0% | |
| ACACCTGCATCGGACATCGA+GGG | + | chr8_1:25008745-25008764 | Msa1186570:CDS | 55.0% | |
| ATTCCCTCGATGTCCGATGC+AGG | - | chr8_1:25008751-25008770 | None:intergenic | 55.0% | |
| AGACACCGAAGAGTGGCAAG+TGG | - | chr8_1:25008814-25008833 | None:intergenic | 55.0% | |
| !! | GCTGCAATCATAAGCACCGG+AGG | + | chr8_1:25009466-25009485 | Msa1186570:CDS | 55.0% |
| TACACCTGCATCGGACATCG+AGG | + | chr8_1:25008744-25008763 | Msa1186570:CDS | 55.0% | |
| ACACCTGCATCGGACATCGA+GGG | + | chr8_1:25008745-25008764 | Msa1186570:CDS | 55.0% | |
| ATTCCCTCGATGTCCGATGC+AGG | - | chr8_1:25008751-25008770 | None:intergenic | 55.0% | |
| AGACACCGAAGAGTGGCAAG+TGG | - | chr8_1:25008814-25008833 | None:intergenic | 55.0% | |
| !! | GCTGCAATCATAAGCACCGG+AGG | + | chr8_1:25009466-25009485 | Msa1186570:CDS | 55.0% |
| CAGCACGGATAAGGCCTGAG+TGG | - | chr8_1:25008187-25008206 | None:intergenic | 60.0% | |
| ! | CACTCAGGCCTTATCCGTGC+TGG | + | chr8_1:25008185-25008204 | Msa1186570:CDS | 60.0% |
| TTTGCTAGCGAAGGGGCGAC+GGG | - | chr8_1:25008779-25008798 | None:intergenic | 60.0% | |
| CTTTGCTAGCGAAGGGGCGA+CGG | - | chr8_1:25008780-25008799 | None:intergenic | 60.0% | |
| AGAGTGGCAAGTGGCGGTGA+AGG | - | chr8_1:25008805-25008824 | None:intergenic | 60.0% | |
| CACCGCCACTTGCCACTCTT+CGG | + | chr8_1:25008806-25008825 | Msa1186570:CDS | 60.0% | |
| CACCGAAGAGTGGCAAGTGG+CGG | - | chr8_1:25008811-25008830 | None:intergenic | 60.0% | |
| ! | AGCACCGGAGGAGACTTTGG+CGG | + | chr8_1:25009478-25009497 | Msa1186570:CDS | 60.0% |
| CAGCACGGATAAGGCCTGAG+TGG | - | chr8_1:25008187-25008206 | None:intergenic | 60.0% | |
| ! | CACTCAGGCCTTATCCGTGC+TGG | + | chr8_1:25008185-25008204 | Msa1186570:CDS | 60.0% |
| TTTGCTAGCGAAGGGGCGAC+GGG | - | chr8_1:25008779-25008798 | None:intergenic | 60.0% | |
| CTTTGCTAGCGAAGGGGCGA+CGG | - | chr8_1:25008780-25008799 | None:intergenic | 60.0% | |
| AGAGTGGCAAGTGGCGGTGA+AGG | - | chr8_1:25008805-25008824 | None:intergenic | 60.0% | |
| CACCGCCACTTGCCACTCTT+CGG | + | chr8_1:25008806-25008825 | Msa1186570:CDS | 60.0% | |
| CACCGAAGAGTGGCAAGTGG+CGG | - | chr8_1:25008811-25008830 | None:intergenic | 60.0% | |
| ! | AGCACCGGAGGAGACTTTGG+CGG | + | chr8_1:25009478-25009497 | Msa1186570:CDS | 60.0% |
| TTGCTAGCGAAGGGGCGACG+GGG | - | chr8_1:25008778-25008797 | None:intergenic | 65.0% | |
| GCACCGGAGGAGACTTTGGC+GGG | + | chr8_1:25009479-25009498 | Msa1186570:CDS | 65.0% | |
| CACCGGAGGAGACTTTGGCG+GGG | + | chr8_1:25009480-25009499 | Msa1186570:CDS | 65.0% | |
| ACCGGAGGAGACTTTGGCGG+GGG | + | chr8_1:25009481-25009500 | Msa1186570:CDS | 65.0% | |
| TCCCCCGCCAAAGTCTCCTC+CGG | - | chr8_1:25009485-25009504 | None:intergenic | 65.0% | |
| TTGCTAGCGAAGGGGCGACG+GGG | - | chr8_1:25008778-25008797 | None:intergenic | 65.0% | |
| GCACCGGAGGAGACTTTGGC+GGG | + | chr8_1:25009479-25009498 | Msa1186570:CDS | 65.0% | |
| CACCGGAGGAGACTTTGGCG+GGG | + | chr8_1:25009480-25009499 | Msa1186570:CDS | 65.0% | |
| ACCGGAGGAGACTTTGGCGG+GGG | + | chr8_1:25009481-25009500 | Msa1186570:CDS | 65.0% | |
| TCCCCCGCCAAAGTCTCCTC+CGG | - | chr8_1:25009485-25009504 | None:intergenic | 65.0% | |
| CTAGCGAAGGGGCGACGGGG+TGG | - | chr8_1:25008775-25008794 | None:intergenic | 75.0% | |
| CTAGCGAAGGGGCGACGGGG+TGG | - | chr8_1:25008775-25008794 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 25008056 | 25009988 | 25008056 | ID=Msa1186570;Name=Msa1186570 |
| chr8_1 | mRNA | 25008056 | 25009988 | 25008056 | ID=Msa1186570-mRNA-1;Parent=Msa1186570;Name=Msa1186570-mRNA-1;_AED=0.31;_eAED=0.31;_QI=69|0.25|0.6|1|1|1|5|280|243 |
| chr8_1 | exon | 25008056 | 25008206 | 25008056 | ID=Msa1186570-mRNA-1:exon:9053;Parent=Msa1186570-mRNA-1 |
| chr8_1 | exon | 25008294 | 25008485 | 25008294 | ID=Msa1186570-mRNA-1:exon:9054;Parent=Msa1186570-mRNA-1 |
| chr8_1 | exon | 25008734 | 25008827 | 25008734 | ID=Msa1186570-mRNA-1:exon:9055;Parent=Msa1186570-mRNA-1 |
| chr8_1 | exon | 25009265 | 25009323 | 25009265 | ID=Msa1186570-mRNA-1:exon:9056;Parent=Msa1186570-mRNA-1 |
| chr8_1 | exon | 25009404 | 25009988 | 25009404 | ID=Msa1186570-mRNA-1:exon:9057;Parent=Msa1186570-mRNA-1 |
| chr8_1 | five_prime_UTR | 25008056 | 25008124 | 25008056 | ID=Msa1186570-mRNA-1:five_prime_utr;Parent=Msa1186570-mRNA-1 |
| chr8_1 | CDS | 25008125 | 25008206 | 25008125 | ID=Msa1186570-mRNA-1:cds;Parent=Msa1186570-mRNA-1 |
| chr8_1 | CDS | 25008294 | 25008485 | 25008294 | ID=Msa1186570-mRNA-1:cds;Parent=Msa1186570-mRNA-1 |
| chr8_1 | CDS | 25008734 | 25008827 | 25008734 | ID=Msa1186570-mRNA-1:cds;Parent=Msa1186570-mRNA-1 |
| chr8_1 | CDS | 25009265 | 25009323 | 25009265 | ID=Msa1186570-mRNA-1:cds;Parent=Msa1186570-mRNA-1 |
| chr8_1 | CDS | 25009404 | 25009708 | 25009404 | ID=Msa1186570-mRNA-1:cds;Parent=Msa1186570-mRNA-1 |
| chr8_1 | three_prime_UTR | 25009709 | 25009988 | 25009709 | ID=Msa1186570-mRNA-1:three_prime_utr;Parent=Msa1186570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
