Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1068330 | XP_003624241.1 | 96.491 | 228 | 8 | 0 | 1 | 228 | 1 | 228 | 2.79e-158 | 447 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1068330 | A2Q5X5 | 96.491 | 228 | 8 | 0 | 1 | 228 | 1 | 228 | 1.33e-158 | 447 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0019390 | Msa1068330 | 0.807035 | 6.153222e-50 | -8.615850e-47 |
| Msa0047160 | Msa1068330 | 0.800714 | 1.266285e-48 | -8.615850e-47 |
| Msa0115130 | Msa1068330 | 0.805959 | 1.037652e-49 | -8.615850e-47 |
| Msa0118710 | Msa1068330 | 0.815193 | 1.047992e-51 | -8.615850e-47 |
| Msa0719420 | Msa1068330 | 0.813684 | 2.259378e-51 | -8.615850e-47 |
| Msa0789680 | Msa1068330 | 0.814174 | 1.761886e-51 | -8.615850e-47 |
| Msa0802410 | Msa1068330 | 0.814525 | 1.474141e-51 | -8.615850e-47 |
| Msa0146770 | Msa1068330 | 0.828826 | 7.244241e-55 | -8.615850e-47 |
| Msa0231660 | Msa1068330 | 0.806851 | 6.730346e-50 | -8.615850e-47 |
| Msa1068330 | Msa1135890 | 0.852637 | 4.051758e-61 | -8.615850e-47 |
| Msa1068330 | Msa1265630 | 0.801118 | 1.046819e-48 | -8.615850e-47 |
| Msa1068330 | Msa1331710 | 0.806236 | 9.075188e-50 | -8.615850e-47 |
| Msa1068330 | Msa1355700 | 0.821508 | 3.889947e-53 | -8.615850e-47 |
| Msa1068330 | Msa1381480 | 0.805295 | 1.430318e-49 | -8.615850e-47 |
| Msa1068330 | Msa1387410 | 0.814055 | 1.871891e-51 | -8.615850e-47 |
| Msa0283390 | Msa1068330 | 0.807856 | 4.120170e-50 | -8.615850e-47 |
| Msa0300350 | Msa1068330 | 0.802754 | 4.828500e-49 | -8.615850e-47 |
| Msa0554290 | Msa1068330 | 0.826725 | 2.316737e-54 | -8.615850e-47 |
| Msa0581280 | Msa1068330 | 0.802396 | 5.722245e-49 | -8.615850e-47 |
| Msa0925770 | Msa1068330 | 0.809750 | 1.621684e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1068330 | MtrunA17_Chr7g0249871 | 96.491 | 228 | 8 | 0 | 1 | 228 | 1 | 228 | 2.57e-162 | 447 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1068330 | AT1G75670.2 | 54.124 | 194 | 87 | 1 | 1 | 192 | 1 | 194 | 5.85e-75 | 225 |
| Msa1068330 | AT1G75670.1 | 54.124 | 194 | 87 | 1 | 1 | 192 | 1 | 194 | 5.85e-75 | 225 |
| Msa1068330 | AT1G75670.3 | 53.548 | 155 | 70 | 1 | 1 | 153 | 1 | 155 | 3.17e-56 | 176 |
Find 86 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCTATCCTTTCTGATTA+AGG | 0.143791 | 7_2:+63298447 | None:intergenic |
| GCATCTTTATCTGACATTAA+TGG | 0.198898 | 7_2:+63300108 | None:intergenic |
| GATGGGGTTTATCTCAGTTT+TGG | 0.206768 | 7_2:-63298540 | Msa1068330:three_prime_UTR |
| TCATCCAATGGAAGGGTTAA+AGG | 0.215251 | 7_2:-63302039 | Msa1068330:exon |
| ACTGAGTGAGTTTGATAATT+AGG | 0.224281 | 7_2:-63298416 | Msa1068330:three_prime_UTR |
| TCCACAGATCAATGTTAAAA+AGG | 0.281747 | 7_2:+63298333 | None:intergenic |
| CCCAAGCCAGATATGCTTAT+AGG | 0.283996 | 7_2:-63301715 | Msa1068330:intron |
| TGAAATTAACTCGGTGTAAT+GGG | 0.288998 | 7_2:+63302077 | None:intergenic |
| AAAAGAAATACCTGTCAGTA+TGG | 0.289033 | 7_2:+63300239 | None:intergenic |
| TTATAACTGAGAAAGATATT+AGG | 0.297974 | 7_2:-63301534 | Msa1068330:CDS |
| GGACTCGCCATTTGATGTTT+AGG | 0.304647 | 7_2:-63298621 | Msa1068330:three_prime_UTR |
| TGTATGTTTCCTGTGTTATC+TGG | 0.310557 | 7_2:+63300292 | None:intergenic |
| TTGCTATCCTTTCTGATTAA+GGG | 0.318383 | 7_2:+63298448 | None:intergenic |
| TATAACTGAGAAAGATATTA+GGG | 0.318851 | 7_2:-63301533 | Msa1068330:CDS |
| ATGCAGAGAAGCTAGGTTTA+TGG | 0.320120 | 7_2:-63298656 | Msa1068330:intron |
| CCCGGTGTTTATCCGTATTT+CGG | 0.337821 | 7_2:-63301772 | Msa1068330:CDS |
| AGAGGTCGGGTTCGTTTGTT+AGG | 0.347485 | 7_2:+63302150 | None:intergenic |
| ACATTACCTATAAGCATATC+TGG | 0.349568 | 7_2:+63301709 | None:intergenic |
| ACCCTTCCATTGGATGAGTT+AGG | 0.361037 | 7_2:+63302045 | None:intergenic |
| AATTGGCATGTTATCATTGA+TGG | 0.364692 | 7_2:-63298558 | Msa1068330:three_prime_UTR |
| GTCGGGTTCGTTTGTTAGGT+TGG | 0.365914 | 7_2:+63302154 | None:intergenic |
| GGTTTATGGATGGAAGAGTT+TGG | 0.366673 | 7_2:-63298642 | Msa1068330:three_prime_UTR |
| GGTTTATTCGGTTGGTGACT+CGG | 0.376407 | 7_2:+63302099 | None:intergenic |
| GTTATTATTGTTATTGTGCT+TGG | 0.377731 | 7_2:-63301571 | Msa1068330:CDS |
| TCGGTGTAATGGGGTTTATT+CGG | 0.381490 | 7_2:+63302087 | None:intergenic |
| TTAGGTTTATTATTTGCCTT+TGG | 0.382292 | 7_2:-63298398 | Msa1068330:three_prime_UTR |
| GAGGAACAACTATATGTTTA+CGG | 0.388808 | 7_2:-63300325 | Msa1068330:CDS |
| TCGGGTTCGTTTGTTAGGTT+GGG | 0.391581 | 7_2:+63302155 | None:intergenic |
| GGATTATTACTACACAAAAC+TGG | 0.404638 | 7_2:-63298313 | Msa1068330:three_prime_UTR |
| CCCTTCCATTGGATGAGTTA+GGG | 0.406234 | 7_2:+63302046 | None:intergenic |
| GGCTTACGACGTTGATTCGT+TGG | 0.406796 | 7_2:-63301815 | Msa1068330:CDS |
| TTGAAATTAACTCGGTGTAA+TGG | 0.407608 | 7_2:+63302076 | None:intergenic |
| GAGTTCACGAAGAACGGCTT+TGG | 0.409430 | 7_2:+63301962 | None:intergenic |
| AAGATCTCAATACAGCATTC+AGG | 0.410641 | 7_2:+63300014 | None:intergenic |
| ACCTATAAGCATATCTGGCT+TGG | 0.413600 | 7_2:+63301714 | None:intergenic |
| CTTTACCAGTGAATAAAAGT+TGG | 0.422065 | 7_2:+63299981 | None:intergenic |
| AAAATCCACTAACTTCGTAT+AGG | 0.427218 | 7_2:+63298209 | None:intergenic |
| ATCAGAAAGGATAGCAAGAT+TGG | 0.436612 | 7_2:-63298442 | Msa1068330:three_prime_UTR |
| ATGCAACAGGGAAAACGAAT+TGG | 0.445844 | 7_2:-63298575 | Msa1068330:three_prime_UTR |
| ATGAATGTAAACTACTAAGT+TGG | 0.456155 | 7_2:+63302007 | None:intergenic |
| TAATATACCTAAACATCAAA+TGG | 0.456489 | 7_2:+63298614 | None:intergenic |
| CCTATAAGCATATCTGGCTT+GGG | 0.459710 | 7_2:+63301715 | None:intergenic |
| TGTAATGGGGTTTATTCGGT+TGG | 0.465451 | 7_2:+63302091 | None:intergenic |
| GAAACCTTTAACCCTTCCAT+TGG | 0.479905 | 7_2:+63302035 | None:intergenic |
| CACAGGAAACATACAATGGT+TGG | 0.492470 | 7_2:-63300284 | Msa1068330:CDS |
| TTCAGATTAACACCGAAATA+CGG | 0.507297 | 7_2:+63301760 | None:intergenic |
| ATTGGCATGTTATCATTGAT+GGG | 0.512631 | 7_2:-63298557 | Msa1068330:three_prime_UTR |
| AAATGCGCCAAGGTTCTTCC+CGG | 0.515392 | 7_2:-63301790 | Msa1068330:CDS |
| AATCTGTGATTGTAATTTGA+GGG | 0.519688 | 7_2:-63298478 | Msa1068330:three_prime_UTR |
| AAGAAAATGAGAGAAGAGGT+CGG | 0.520804 | 7_2:+63302136 | None:intergenic |
| GTATTTCGGTGTTAATCTGA+AGG | 0.522915 | 7_2:-63301758 | Msa1068330:CDS |
| CAATCTGTGATTGTAATTTG+AGG | 0.531143 | 7_2:-63298479 | Msa1068330:three_prime_UTR |
| ATTGGCAATGCAGAGAAGCT+AGG | 0.538208 | 7_2:-63298663 | Msa1068330:intron |
| AAGCGACATGTGATAAAGAA+AGG | 0.538550 | 7_2:-63301351 | Msa1068330:CDS |
| CAAAACCCTAACTCATCCAA+TGG | 0.544137 | 7_2:-63302051 | Msa1068330:exon |
| GAAACTTGATTGCTTTGAGA+AGG | 0.548730 | 7_2:+63301984 | None:intergenic |
| GTTGAAGAAAATGAGAGAAG+AGG | 0.552782 | 7_2:+63302132 | None:intergenic |
| AAGTTGTTTCCCATACTGAC+AGG | 0.555811 | 7_2:-63300249 | Msa1068330:intron |
| ACCCTAACTCATCCAATGGA+AGG | 0.556187 | 7_2:-63302047 | Msa1068330:exon |
| AGTGCTGAGTTCACGAAGAA+CGG | 0.556777 | 7_2:+63301956 | None:intergenic |
| TGCTAGACCCTTAATCAGAA+AGG | 0.556885 | 7_2:-63298455 | Msa1068330:three_prime_UTR |
| AAAGAAATACCTGTCAGTAT+GGG | 0.561224 | 7_2:+63300240 | None:intergenic |
| ACAATAACAATAATAACCTC+AGG | 0.561602 | 7_2:+63301577 | None:intergenic |
| AGAAAATGAGAGAAGAGGTC+GGG | 0.563865 | 7_2:+63302137 | None:intergenic |
| ATAAACACCGGGAAGAACCT+TGG | 0.567628 | 7_2:+63301783 | None:intergenic |
| TTGGTGACTCGGTGGAGAAG+AGG | 0.580797 | 7_2:+63302110 | None:intergenic |
| CCCTAACTCATCCAATGGAA+GGG | 0.580902 | 7_2:-63302046 | Msa1068330:exon |
| TTGGTCTGATCAATGACAGA+TGG | 0.583880 | 7_2:-63298379 | Msa1068330:three_prime_UTR |
| CCGAAATACGGATAAACACC+GGG | 0.584646 | 7_2:+63301772 | None:intergenic |
| AAATAAAATGACACTTAATG+AGG | 0.586864 | 7_2:+63298243 | None:intergenic |
| TTCGTTGGACAAATGCGCCA+AGG | 0.588326 | 7_2:-63301800 | Msa1068330:CDS |
| GGGAGAGTTCAAATTCACAT+TGG | 0.603036 | 7_2:-63301512 | Msa1068330:intron |
| GAAATTAACTCGGTGTAATG+GGG | 0.603502 | 7_2:+63302078 | None:intergenic |
| ACCGAAATACGGATAAACAC+CGG | 0.606771 | 7_2:+63301771 | None:intergenic |
| TTGGCATGTTATCATTGATG+GGG | 0.610900 | 7_2:-63298556 | Msa1068330:three_prime_UTR |
| TCTGTCATTGATCAGACCAA+AGG | 0.640202 | 7_2:+63298382 | None:intergenic |
| ACAATGGTTGGATAAGAACT+CGG | 0.646452 | 7_2:-63300272 | Msa1068330:CDS |
| AGAGAAGCTAGGTTTATGGA+TGG | 0.649101 | 7_2:-63298652 | Msa1068330:three_prime_UTR |
| TAATCGTTGCAGCTTCGATG+AGG | 0.651947 | 7_2:-63300344 | Msa1068330:intron |
| TTATTCGGTTGGTGACTCGG+TGG | 0.652647 | 7_2:+63302102 | None:intergenic |
| CTTAACCGAAAACCGCAGCA+TGG | 0.667040 | 7_2:+63301326 | None:intergenic |
| TCTCTAGTTCCAGATAACAC+AGG | 0.683020 | 7_2:-63300301 | Msa1068330:CDS |
| AGTAGAGAAAGTTACACCTG+AGG | 0.691992 | 7_2:-63301593 | Msa1068330:CDS |
| ATAACACAGGAAACATACAA+TGG | 0.704605 | 7_2:-63300288 | Msa1068330:CDS |
| ATAACTGAGAAAGATATTAG+GGG | 0.708025 | 7_2:-63301532 | Msa1068330:CDS |
| TAAAGAAAGGAACCATGCTG+CGG | 0.718558 | 7_2:-63301338 | Msa1068330:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGATTCTATTTTAATTAAA+AGG | - | chr7_2:63300417-63300436 | Msa1068330:intron | 10.0% |
| !!! | AATTTTTTTATCATAAACTT+TGG | - | chr7_2:63300501-63300520 | Msa1068330:intron | 10.0% |
| !!! | TAAAGTGTTATATTATTAGT+TGG | + | chr7_2:63299311-63299330 | None:intergenic | 15.0% |
| !! | TTGAAAATGAATATATTCAT+AGG | - | chr7_2:63299346-63299365 | Msa1068330:intron | 15.0% |
| !!! | GTAATACTTTTAATTCATAT+AGG | - | chr7_2:63299805-63299824 | Msa1068330:intron | 15.0% |
| !! | TGTATGTTAGAAATTTAAAA+AGG | - | chr7_2:63300530-63300549 | Msa1068330:intron | 15.0% |
| !! | TGTATGTTAGAAATTTAAAA+AGG | - | chr7_2:63300530-63300549 | Msa1068330:intron | 15.0% |
| !! | TATATCAAACATATATCTAA+GGG | + | chr7_2:63300877-63300896 | None:intergenic | 15.0% |
| !! | TAATCTAATTAATGACATAT+TGG | - | chr7_2:63301697-63301716 | Msa1068330:intron | 15.0% |
| !! | TAAAAATTCAGTTACATTGA+AGG | + | chr7_2:63298474-63298493 | None:intergenic | 20.0% |
| !!! | AGGTAATGTTGATAATTTTT+TGG | - | chr7_2:63298683-63298702 | Msa1068330:intron | 20.0% |
| !!! | TGGTTTTAAGAAAAAATCAA+AGG | - | chr7_2:63298703-63298722 | Msa1068330:intron | 20.0% |
| !!! | AGTTAGGTTAGTTAATTAAT+TGG | - | chr7_2:63298731-63298750 | Msa1068330:intron | 20.0% |
| !!! | GTTAGGTTAGTTAATTAATT+GGG | - | chr7_2:63298732-63298751 | Msa1068330:intron | 20.0% |
| !! | TTATAACTGAGAAAGATATT+AGG | - | chr7_2:63298844-63298863 | Msa1068330:intron | 20.0% |
| !! | TATAACTGAGAAAGATATTA+GGG | - | chr7_2:63298845-63298864 | Msa1068330:intron | 20.0% |
| !!! | TTTTTCTTTTTGTAGAAACA+TGG | - | chr7_2:63298982-63299001 | Msa1068330:intron | 20.0% |
| !!! | TTTTCTTTTTGTAGAAACAT+GGG | - | chr7_2:63298983-63299002 | Msa1068330:intron | 20.0% |
| !! | ATTAGTTGGTTACATATTTA+TGG | + | chr7_2:63299297-63299316 | None:intergenic | 20.0% |
| !! | ATGAATATATTCATAGGAAT+TGG | - | chr7_2:63299352-63299371 | Msa1068330:intron | 20.0% |
| !! | TTCCATATCAATAAATTTGT+GGG | - | chr7_2:63299376-63299395 | Msa1068330:intron | 20.0% |
| !! | ATATCTAGTATCTACTATTA+AGG | - | chr7_2:63299453-63299472 | Msa1068330:intron | 20.0% |
| !!! | TTGTTCATTTTTGTACATTT+TGG | + | chr7_2:63299544-63299563 | None:intergenic | 20.0% |
| !!! | GTTATAACTTTTGTACATTT+TGG | + | chr7_2:63299640-63299659 | None:intergenic | 20.0% |
| !!! | ACTTTTAATTCATATAGGAT+AGG | - | chr7_2:63299810-63299829 | Msa1068330:intron | 20.0% |
| !! | AGAAATTTAAAAAGGCTAAA+AGG | - | chr7_2:63300629-63300648 | Msa1068330:intron | 20.0% |
| !! | ATATCAAACATATATCTAAG+GGG | + | chr7_2:63300876-63300895 | None:intergenic | 20.0% |
| !! | CTATATCAAACATATATCTA+AGG | + | chr7_2:63300878-63300897 | None:intergenic | 20.0% |
| !! | TAATAACACTACATTAAAAG+AGG | + | chr7_2:63301301-63301320 | None:intergenic | 20.0% |
| !!! | TCTATTTCTTTGTTCTATAA+AGG | - | chr7_2:63301341-63301360 | Msa1068330:CDS | 20.0% |
| !! | TAATATACCTAAACATCAAA+TGG | + | chr7_2:63301767-63301786 | None:intergenic | 20.0% |
| !!! | AAGTATTCAATTTTAGAAGT+TGG | + | chr7_2:63302115-63302134 | None:intergenic | 20.0% |
| !! | AAATAAAATGACACTTAATG+AGG | + | chr7_2:63302138-63302157 | None:intergenic | 20.0% |
| !!! | GTTTTGAGTTGAAATTAACT+CGG | + | chr7_2:63298313-63298332 | None:intergenic | 25.0% |
| ! | ATGAATGTAAACTACTAAGT+TGG | + | chr7_2:63298374-63298393 | None:intergenic | 25.0% |
| ! | AAAATCAAAGGAATTGAGTT+AGG | - | chr7_2:63298715-63298734 | Msa1068330:intron | 25.0% |
| ! | ACAATAACAATAATAACCTC+AGG | + | chr7_2:63298804-63298823 | None:intergenic | 25.0% |
| !! | GTTATTATTGTTATTGTGCT+TGG | - | chr7_2:63298807-63298826 | Msa1068330:intron | 25.0% |
| ! | ATAACTGAGAAAGATATTAG+GGG | - | chr7_2:63298846-63298865 | Msa1068330:intron | 25.0% |
| !! | TTTCTTTTTGTAGAAACATG+GGG | - | chr7_2:63298984-63299003 | Msa1068330:intron | 25.0% |
| !! | ATTTTCAACCAATGATATAG+TGG | + | chr7_2:63299334-63299353 | None:intergenic | 25.0% |
| ! | CTTCCATATCAATAAATTTG+TGG | - | chr7_2:63299375-63299394 | Msa1068330:intron | 25.0% |
| ! | TCCATATCAATAAATTTGTG+GGG | - | chr7_2:63299377-63299396 | Msa1068330:intron | 25.0% |
| !! | TCCTGTAGATCAATTTTTAA+GGG | + | chr7_2:63299714-63299733 | None:intergenic | 25.0% |
| !! | TTCCTGTAGATCAATTTTTA+AGG | + | chr7_2:63299715-63299734 | None:intergenic | 25.0% |
| !! | ACCCTGTAAAGTTTAAAATT+TGG | - | chr7_2:63299969-63299988 | Msa1068330:intron | 25.0% |
| !! | CCCAAATTTTAAACTTTACA+GGG | + | chr7_2:63299973-63299992 | None:intergenic | 25.0% |
| !! | CCCTGTAAAGTTTAAAATTT+GGG | - | chr7_2:63299970-63299989 | Msa1068330:intron | 25.0% |
| ! | ACAAAAAAGAGAGAAAATGA+GGG | - | chr7_2:63300243-63300262 | Msa1068330:intron | 25.0% |
| !!! | CTTCGACATTTTTAGTTTTT+TGG | + | chr7_2:63300322-63300341 | None:intergenic | 25.0% |
| ! | AGAGAAAAAAGGTAAATACA+AGG | - | chr7_2:63300789-63300808 | Msa1068330:intron | 25.0% |
| ! | GAGAAAAAAGGTAAATACAA+GGG | - | chr7_2:63300790-63300809 | Msa1068330:intron | 25.0% |
| ! | AAAAAACTGAAGAATGGTTA+TGG | - | chr7_2:63300818-63300837 | Msa1068330:intron | 25.0% |
| ! | TATCAAACATATATCTAAGG+GGG | + | chr7_2:63300875-63300894 | None:intergenic | 25.0% |
| !! | CTATTTTCTTACTTCTGTTT+TGG | + | chr7_2:63300920-63300939 | None:intergenic | 25.0% |
| ! | AACTCTTTGATAGATACATT+AGG | + | chr7_2:63301010-63301029 | None:intergenic | 25.0% |
| ! | TATTCACTCAAATTTGGAAA+GGG | + | chr7_2:63301140-63301159 | None:intergenic | 25.0% |
| !! | CTTTTCTATTCACTCAAATT+TGG | + | chr7_2:63301146-63301165 | None:intergenic | 25.0% |
| ! | ATTCACAAACTTTCTTAAAC+TGG | - | chr7_2:63301174-63301193 | Msa1068330:intron | 25.0% |
| !! | AATGTAGTGTTATTATAGAC+AGG | - | chr7_2:63301306-63301325 | Msa1068330:intron | 25.0% |
| !! | TTCTATAAAGGCATAAGAAA+GGG | - | chr7_2:63301353-63301372 | Msa1068330:CDS | 25.0% |
| !! | TTAACCTCATTCATTCTTTT+TGG | - | chr7_2:63301657-63301676 | Msa1068330:intron | 25.0% |
| ! | AATCTGTGATTGTAATTTGA+GGG | - | chr7_2:63301900-63301919 | Msa1068330:intron | 25.0% |
| ! | TTAGGTTTATTATTTGCCTT+TGG | - | chr7_2:63301980-63301999 | Msa1068330:CDS | 25.0% |
| !! | TGAAATTAACTCGGTGTAAT+GGG | + | chr7_2:63298304-63298323 | None:intergenic | 30.0% |
| !! | TTGAAATTAACTCGGTGTAA+TGG | + | chr7_2:63298305-63298324 | None:intergenic | 30.0% |
| AAATTCAGTTACATTGAAGG+TGG | + | chr7_2:63298471-63298490 | None:intergenic | 30.0% | |
| TTCAGATTAACACCGAAATA+CGG | + | chr7_2:63298621-63298640 | None:intergenic | 30.0% | |
| ACATTACCTATAAGCATATC+TGG | + | chr7_2:63298672-63298691 | None:intergenic | 30.0% | |
| !!! | TGTTGTGTTGTTTTTTCAGA+AGG | - | chr7_2:63298759-63298778 | Msa1068330:intron | 30.0% |
| ACAACAACTACGAAAACATT+CGG | + | chr7_2:63298904-63298923 | None:intergenic | 30.0% | |
| ! | TTGTTGTTGTCTTATTGTGT+CGG | - | chr7_2:63298917-63298936 | Msa1068330:intron | 30.0% |
| !!! | GATATTTTAGTTAGTTCAGC+TGG | - | chr7_2:63299200-63299219 | Msa1068330:intron | 30.0% |
| ACACTTTACCACTATATCAT+TGG | - | chr7_2:63299323-63299342 | Msa1068330:intron | 30.0% | |
| TCCCCACAAATTTATTGATA+TGG | + | chr7_2:63299381-63299400 | None:intergenic | 30.0% | |
| !! | TTGTACATTTTGGTGCATTT+GGG | + | chr7_2:63299534-63299553 | None:intergenic | 30.0% |
| !! | TTTGTACATTTTGGTGCATT+TGG | + | chr7_2:63299535-63299554 | None:intergenic | 30.0% |
| !! | ATAACACACTGACTGAATTT+TGG | - | chr7_2:63299569-63299588 | Msa1068330:intron | 30.0% |
| !! | TGTACATTTTGGTACATTTG+AGG | + | chr7_2:63299629-63299648 | None:intergenic | 30.0% |
| !! | ATAACTCACTGACTGAATTT+TGG | - | chr7_2:63299655-63299674 | Msa1068330:intron | 30.0% |
| ACCCTTAAAAATTGATCTAC+AGG | - | chr7_2:63299710-63299729 | Msa1068330:intron | 30.0% | |
| TATACTACCAACAAGAAAGT+CGG | + | chr7_2:63299928-63299947 | None:intergenic | 30.0% | |
| ! | GCCCAAATTTTAAACTTTAC+AGG | + | chr7_2:63299974-63299993 | None:intergenic | 30.0% |
| GAGGAACAACTATATGTTTA+CGG | - | chr7_2:63300053-63300072 | Msa1068330:CDS | 30.0% | |
| ATAACACAGGAAACATACAA+TGG | - | chr7_2:63300090-63300109 | Msa1068330:CDS | 30.0% | |
| AAAGAAATACCTGTCAGTAT+GGG | + | chr7_2:63300141-63300160 | None:intergenic | 30.0% | |
| AAAAGAAATACCTGTCAGTA+TGG | + | chr7_2:63300142-63300161 | None:intergenic | 30.0% | |
| TGCATCTTAGAAAACTTTAC+AGG | - | chr7_2:63300217-63300236 | Msa1068330:intron | 30.0% | |
| CACAAAAAAGAGAGAAAATG+AGG | - | chr7_2:63300242-63300261 | Msa1068330:intron | 30.0% | |
| GCATCTTTATCTGACATTAA+TGG | + | chr7_2:63300273-63300292 | None:intergenic | 30.0% | |
| ! | GTAATCCAACTTTTATTCAC+TGG | - | chr7_2:63300392-63300411 | Msa1068330:intron | 30.0% |
| CTTTACCAGTGAATAAAAGT+TGG | + | chr7_2:63300400-63300419 | None:intergenic | 30.0% | |
| ATTCTCTGCATAGAGAAAAA+AGG | - | chr7_2:63300778-63300797 | Msa1068330:intron | 30.0% | |
| GTATCAAACATAAAGAGACT+GGG | + | chr7_2:63300847-63300866 | None:intergenic | 30.0% | |
| TGTATCAAACATAAAGAGAC+TGG | + | chr7_2:63300848-63300867 | None:intergenic | 30.0% | |
| ATAGATACATTAGGAGATGA+GGG | + | chr7_2:63301001-63301020 | None:intergenic | 30.0% | |
| TATATGTTAGGGGTAAACAT+GGG | + | chr7_2:63301117-63301136 | None:intergenic | 30.0% | |
| ! | TTTGGAAAGGGTATATGTTA+GGG | + | chr7_2:63301128-63301147 | None:intergenic | 30.0% |
| ! | ATTTGGAAAGGGTATATGTT+AGG | + | chr7_2:63301129-63301148 | None:intergenic | 30.0% |
| CTATTCACTCAAATTTGGAA+AGG | + | chr7_2:63301141-63301160 | None:intergenic | 30.0% | |
| TGAGTGAATAGAAAAGTGAA+AGG | - | chr7_2:63301150-63301169 | Msa1068330:intron | 30.0% | |
| TCTCAATTAAGTGTTTCCAA+AGG | - | chr7_2:63301221-63301240 | Msa1068330:intron | 30.0% | |
| CTCAATTAAGTGTTTCCAAA+GGG | - | chr7_2:63301222-63301241 | Msa1068330:intron | 30.0% | |
| TCAATTAAGTGTTTCCAAAG+GGG | - | chr7_2:63301223-63301242 | Msa1068330:intron | 30.0% | |
| !! | AAGAGGATAACCTTACTTTT+GGG | + | chr7_2:63301284-63301303 | None:intergenic | 30.0% |
| ! | AAAGAGGATAACCTTACTTT+TGG | + | chr7_2:63301285-63301304 | None:intergenic | 30.0% |
| ! | GTTCTATAAAGGCATAAGAA+AGG | - | chr7_2:63301352-63301371 | Msa1068330:CDS | 30.0% |
| CCTTGTGATGTTAGATTATT+CGG | - | chr7_2:63301483-63301502 | Msa1068330:intron | 30.0% | |
| !!! | ACTGTTTTTGTTATTTTCCG+CGG | - | chr7_2:63301552-63301571 | Msa1068330:CDS | 30.0% |
| TTCTCCAAAAAGAATGAATG+AGG | + | chr7_2:63301664-63301683 | None:intergenic | 30.0% | |
| !! | CATTCATTCTTTTTGGAGAA+TGG | - | chr7_2:63301664-63301683 | Msa1068330:intron | 30.0% |
| !!! | TTTTTTCAAGTACATGCAAC+AGG | - | chr7_2:63301790-63301809 | Msa1068330:CDS | 30.0% |
| !!! | TTTTTCAAGTACATGCAACA+GGG | - | chr7_2:63301791-63301810 | Msa1068330:CDS | 30.0% |
| AATTGGCATGTTATCATTGA+TGG | - | chr7_2:63301820-63301839 | Msa1068330:CDS | 30.0% | |
| ATTGGCATGTTATCATTGAT+GGG | - | chr7_2:63301821-63301840 | Msa1068330:CDS | 30.0% | |
| CAATCTGTGATTGTAATTTG+AGG | - | chr7_2:63301899-63301918 | Msa1068330:intron | 30.0% | |
| TTGCTATCCTTTCTGATTAA+GGG | + | chr7_2:63301933-63301952 | None:intergenic | 30.0% | |
| ! | ACTGAGTGAGTTTGATAATT+AGG | - | chr7_2:63301962-63301981 | Msa1068330:CDS | 30.0% |
| ! | ACCTTTTTAACATTGATCTG+TGG | - | chr7_2:63302044-63302063 | Msa1068330:exon | 30.0% |
| TCCACAGATCAATGTTAAAA+AGG | + | chr7_2:63302048-63302067 | None:intergenic | 30.0% | |
| GGATTATTACTACACAAAAC+TGG | - | chr7_2:63302065-63302084 | Msa1068330:five_prime_UTR | 30.0% | |
| AAGAAAATGAGAGAAGAGGT+CGG | + | chr7_2:63298245-63298264 | None:intergenic | 35.0% | |
| GTTGAAGAAAATGAGAGAAG+AGG | + | chr7_2:63298249-63298268 | None:intergenic | 35.0% | |
| !! | GAAATTAACTCGGTGTAATG+GGG | + | chr7_2:63298303-63298322 | None:intergenic | 35.0% |
| !! | GAAACTTGATTGCTTTGAGA+AGG | + | chr7_2:63298397-63298416 | None:intergenic | 35.0% |
| !! | GTATTTCGGTGTTAATCTGA+AGG | - | chr7_2:63298620-63298639 | Msa1068330:three_prime_UTR | 35.0% |
| AAGCGACATGTGATAAAGAA+AGG | - | chr7_2:63299027-63299046 | Msa1068330:intron | 35.0% | |
| ATTGTAAGGCAAAAGATGCA+TGG | + | chr7_2:63299109-63299128 | None:intergenic | 35.0% | |
| AACACACTCATGCAATTGTA+AGG | + | chr7_2:63299123-63299142 | None:intergenic | 35.0% | |
| ATCAATAAATTTGTGGGGAG+TGG | - | chr7_2:63299382-63299401 | Msa1068330:intron | 35.0% | |
| TAGATATCCATTCAGAGACA+TGG | + | chr7_2:63299440-63299459 | None:intergenic | 35.0% | |
| TTGGGATTTATGCAAAGAAC+TGG | + | chr7_2:63299483-63299502 | None:intergenic | 35.0% | |
| ACCAGAATGAATGTGCATTT+GGG | + | chr7_2:63299501-63299520 | None:intergenic | 35.0% | |
| TACCAGAATGAATGTGCATT+TGG | + | chr7_2:63299502-63299521 | None:intergenic | 35.0% | |
| !! | TGTACATTTTGGTGCATTTG+GGG | + | chr7_2:63299533-63299552 | None:intergenic | 35.0% |
| TAGTGTATGTGCAACTACAA+GGG | + | chr7_2:63299600-63299619 | None:intergenic | 35.0% | |
| !! | ATTTTGGTACATTTGAGGCT+TGG | + | chr7_2:63299624-63299643 | None:intergenic | 35.0% |
| AGATAAGTGAGTGTATGAGT+TGG | + | chr7_2:63299780-63299799 | None:intergenic | 35.0% | |
| !!! | AGTTAGCTTTTACTGCATGT+TGG | - | chr7_2:63299870-63299889 | Msa1068330:intron | 35.0% |
| TACTGCATGTTGGAAAACTT+TGG | - | chr7_2:63299880-63299899 | Msa1068330:intron | 35.0% | |
| TGTATGTTTCCTGTGTTATC+TGG | + | chr7_2:63300089-63300108 | None:intergenic | 35.0% | |
| ACAATGGTTGGATAAGAACT+CGG | - | chr7_2:63300106-63300125 | Msa1068330:CDS | 35.0% | |
| AAGATCTCAATACAGCATTC+AGG | + | chr7_2:63300367-63300386 | None:intergenic | 35.0% | |
| ! | AGGTGTCTAAGAGAGTATAA+TGG | + | chr7_2:63300698-63300717 | None:intergenic | 35.0% |
| AGAAATATTTCTTCCAGCAG+AGG | + | chr7_2:63300747-63300766 | None:intergenic | 35.0% | |
| GACACGAAAAAACTGAAGAA+TGG | - | chr7_2:63300812-63300831 | Msa1068330:intron | 35.0% | |
| !!! | TGTTTTGGTGTTCTTCTAAG+GGG | + | chr7_2:63300905-63300924 | None:intergenic | 35.0% |
| !!! | CTGTTTTGGTGTTCTTCTAA+GGG | + | chr7_2:63300906-63300925 | None:intergenic | 35.0% |
| !!! | TCTGTTTTGGTGTTCTTCTA+AGG | + | chr7_2:63300907-63300926 | None:intergenic | 35.0% |
| TGATCTCGTAACAAATTCAG+CGG | - | chr7_2:63300943-63300962 | Msa1068330:intron | 35.0% | |
| TAGATACATTAGGAGATGAG+GGG | + | chr7_2:63301000-63301019 | None:intergenic | 35.0% | |
| GATAGATACATTAGGAGATG+AGG | + | chr7_2:63301002-63301021 | None:intergenic | 35.0% | |
| GTATATGTTAGGGGTAAACA+TGG | + | chr7_2:63301118-63301137 | None:intergenic | 35.0% | |
| ! | TTGGAAAGGGTATATGTTAG+GGG | + | chr7_2:63301127-63301146 | None:intergenic | 35.0% |
| AAAGGGACTTCTTTATGTCA+TGG | - | chr7_2:63301370-63301389 | Msa1068330:CDS | 35.0% | |
| CCGAATAATCTAACATCACA+AGG | + | chr7_2:63301486-63301505 | None:intergenic | 35.0% | |
| GGTTAAACAAATACAGATGC+AGG | + | chr7_2:63301643-63301662 | None:intergenic | 35.0% | |
| TTGGCATGTTATCATTGATG+GGG | - | chr7_2:63301822-63301841 | Msa1068330:CDS | 35.0% | |
| ! | ATGGGGTTTATCTCAGTTTT+GGG | - | chr7_2:63301839-63301858 | Msa1068330:CDS | 35.0% |
| ! | CTTGCTATCCTTTCTGATTA+AGG | + | chr7_2:63301934-63301953 | None:intergenic | 35.0% |
| ATCAGAAAGGATAGCAAGAT+TGG | - | chr7_2:63301936-63301955 | Msa1068330:intron | 35.0% | |
| AGAAAATGAGAGAAGAGGTC+GGG | + | chr7_2:63298244-63298263 | None:intergenic | 40.0% | |
| ! | TGTAATGGGGTTTATTCGGT+TGG | + | chr7_2:63298290-63298309 | None:intergenic | 40.0% |
| ! | TCGGTGTAATGGGGTTTATT+CGG | + | chr7_2:63298294-63298313 | None:intergenic | 40.0% |
| CAAAACCCTAACTCATCCAA+TGG | - | chr7_2:63298327-63298346 | Msa1068330:three_prime_UTR | 40.0% | |
| TCATCCAATGGAAGGGTTAA+AGG | - | chr7_2:63298339-63298358 | Msa1068330:three_prime_UTR | 40.0% | |
| GAAACCTTTAACCCTTCCAT+TGG | + | chr7_2:63298346-63298365 | None:intergenic | 40.0% | |
| AAAATCTCATCGTAGCTGCA+AGG | + | chr7_2:63298528-63298547 | None:intergenic | 40.0% | |
| ! | AGCTACGATGAGATTTTCGA+CGG | - | chr7_2:63298531-63298550 | Msa1068330:three_prime_UTR | 40.0% |
| ACCGAAATACGGATAAACAC+CGG | + | chr7_2:63298610-63298629 | None:intergenic | 40.0% | |
| ! | CCTATAAGCATATCTGGCTT+GGG | + | chr7_2:63298666-63298685 | None:intergenic | 40.0% |
| ACCTATAAGCATATCTGGCT+TGG | + | chr7_2:63298667-63298686 | None:intergenic | 40.0% | |
| AGTAGAGAAAGTTACACCTG+AGG | - | chr7_2:63298785-63298804 | Msa1068330:intron | 40.0% | |
| GGGAGAGTTCAAATTCACAT+TGG | - | chr7_2:63298866-63298885 | Msa1068330:intron | 40.0% | |
| TAAAGAAAGGAACCATGCTG+CGG | - | chr7_2:63299040-63299059 | Msa1068330:intron | 40.0% | |
| ! | TCCTTTTCCATGTCTCTGAA+TGG | - | chr7_2:63299430-63299449 | Msa1068330:intron | 40.0% |
| TCCATTCAGAGACATGGAAA+AGG | + | chr7_2:63299434-63299453 | None:intergenic | 40.0% | |
| TCCCAAATGCACATTCATTC+TGG | - | chr7_2:63299497-63299516 | Msa1068330:intron | 40.0% | |
| !! | ATTTTGGTGCATTTGGGGTT+TGG | + | chr7_2:63299528-63299547 | None:intergenic | 40.0% |
| CTAGTGTATGTGCAACTACA+AGG | + | chr7_2:63299601-63299620 | None:intergenic | 40.0% | |
| TCTATGTTCTGTAAAGAGCG+AGG | + | chr7_2:63299684-63299703 | None:intergenic | 40.0% | |
| ! | TGAGTTGAACGTTGCATCAT+AGG | - | chr7_2:63299996-63300015 | Msa1068330:three_prime_UTR | 40.0% |
| ! | TCTCTAGTTCCAGATAACAC+AGG | - | chr7_2:63300077-63300096 | Msa1068330:CDS | 40.0% |
| CACAGGAAACATACAATGGT+TGG | - | chr7_2:63300094-63300113 | Msa1068330:CDS | 40.0% | |
| ! | AAGTTGTTTCCCATACTGAC+AGG | - | chr7_2:63300129-63300148 | Msa1068330:CDS | 40.0% |
| GAAGAAGCAAAAAGTCAGAG+AGG | - | chr7_2:63300338-63300357 | Msa1068330:intron | 40.0% | |
| ! | GCACTGTTTCTTTCTTCACA+AGG | + | chr7_2:63300659-63300678 | None:intergenic | 40.0% |
| !!! | GTTTTGGTGTTCTTCTAAGG+GGG | + | chr7_2:63300904-63300923 | None:intergenic | 40.0% |
| AGATACATTAGGAGATGAGG+GGG | + | chr7_2:63300999-63301018 | None:intergenic | 40.0% | |
| ! | ACAGCCAGAAAATTCAGGTT+GGG | + | chr7_2:63301055-63301074 | None:intergenic | 40.0% |
| CAAACACAGCCAGAAAATTC+AGG | + | chr7_2:63301060-63301079 | None:intergenic | 40.0% | |
| !!! | CTGAATTTTCTGGCTGTGTT+TGG | - | chr7_2:63301058-63301077 | Msa1068330:intron | 40.0% |
| !! | TTTCTGGCTGTGTTTGGTTT+AGG | - | chr7_2:63301064-63301083 | Msa1068330:intron | 40.0% |
| !! | TGTGTTTGGTTTAGGTTGGT+TGG | - | chr7_2:63301072-63301091 | Msa1068330:intron | 40.0% |
| !! | GTGTTTGGTTTAGGTTGGTT+GGG | - | chr7_2:63301073-63301092 | Msa1068330:intron | 40.0% |
| ! | AAAGGGGAGACTAGGTTTTT+GGG | - | chr7_2:63301239-63301258 | Msa1068330:intron | 40.0% |
| !!! | TTTTTGGGTCTAACTTCGTG+TGG | - | chr7_2:63301254-63301273 | Msa1068330:intron | 40.0% |
| GCTCACATAACACTCAATTG+CGG | + | chr7_2:63301464-63301483 | None:intergenic | 40.0% | |
| TTCTACAGCAGGCTACAAAT+GGG | + | chr7_2:63301509-63301528 | None:intergenic | 40.0% | |
| TTTCTACAGCAGGCTACAAA+TGG | + | chr7_2:63301510-63301529 | None:intergenic | 40.0% | |
| ! | CTCTACTATGTTTCTACAGC+AGG | + | chr7_2:63301520-63301539 | None:intergenic | 40.0% |
| AAACATAGTAGAGTCTGTCG+AGG | - | chr7_2:63301527-63301546 | Msa1068330:CDS | 40.0% | |
| ATGCAGAGAAGCTAGGTTTA+TGG | - | chr7_2:63301722-63301741 | Msa1068330:CDS | 40.0% | |
| AGAGAAGCTAGGTTTATGGA+TGG | - | chr7_2:63301726-63301745 | Msa1068330:CDS | 40.0% | |
| GGTTTATGGATGGAAGAGTT+TGG | - | chr7_2:63301736-63301755 | Msa1068330:CDS | 40.0% | |
| ATGCAACAGGGAAAACGAAT+TGG | - | chr7_2:63301803-63301822 | Msa1068330:CDS | 40.0% | |
| ! | GATGGGGTTTATCTCAGTTT+TGG | - | chr7_2:63301838-63301857 | Msa1068330:CDS | 40.0% |
| TGCTAGACCCTTAATCAGAA+AGG | - | chr7_2:63301923-63301942 | Msa1068330:intron | 40.0% | |
| TCTGTCATTGATCAGACCAA+AGG | + | chr7_2:63301999-63302018 | None:intergenic | 40.0% | |
| TTGGTCTGATCAATGACAGA+TGG | - | chr7_2:63301999-63302018 | Msa1068330:CDS | 40.0% | |
| ! | TCGGGTTCGTTTGTTAGGTT+GGG | + | chr7_2:63298226-63298245 | None:intergenic | 45.0% |
| !! | GGTTTATTCGGTTGGTGACT+CGG | + | chr7_2:63298282-63298301 | None:intergenic | 45.0% |
| ACCCTAACTCATCCAATGGA+AGG | - | chr7_2:63298331-63298350 | Msa1068330:three_prime_UTR | 45.0% | |
| CCCTTCCATTGGATGAGTTA+GGG | + | chr7_2:63298335-63298354 | None:intergenic | 45.0% | |
| CCCTAACTCATCCAATGGAA+GGG | - | chr7_2:63298332-63298351 | Msa1068330:three_prime_UTR | 45.0% | |
| ACCCTTCCATTGGATGAGTT+AGG | + | chr7_2:63298336-63298355 | None:intergenic | 45.0% | |
| ! | AGTGCTGAGTTCACGAAGAA+CGG | + | chr7_2:63298425-63298444 | None:intergenic | 45.0% |
| ! | GATTTTCGACGGCGTTGTTT+TGG | - | chr7_2:63298542-63298561 | Msa1068330:three_prime_UTR | 45.0% |
| ATAAACACCGGGAAGAACCT+TGG | + | chr7_2:63298598-63298617 | None:intergenic | 45.0% | |
| CCGAAATACGGATAAACACC+GGG | + | chr7_2:63298609-63298628 | None:intergenic | 45.0% | |
| CCCGGTGTTTATCCGTATTT+CGG | - | chr7_2:63298606-63298625 | Msa1068330:three_prime_UTR | 45.0% | |
| CCCAAGCCAGATATGCTTAT+AGG | - | chr7_2:63298663-63298682 | Msa1068330:intron | 45.0% | |
| AGTTAGTTCAGCTGGACACA+AGG | - | chr7_2:63299208-63299227 | Msa1068330:intron | 45.0% | |
| ATATTGCAGAGCTAGAGGGA+TGG | + | chr7_2:63299243-63299262 | None:intergenic | 45.0% | |
| CGCAATATTGCAGAGCTAGA+GGG | + | chr7_2:63299247-63299266 | None:intergenic | 45.0% | |
| ACGCAATATTGCAGAGCTAG+AGG | + | chr7_2:63299248-63299267 | None:intergenic | 45.0% | |
| TCTACAGGAATGTTGCTCAC+TGG | - | chr7_2:63299725-63299744 | Msa1068330:intron | 45.0% | |
| ! | TGAGTTGGCAATGACAGTGT+AGG | + | chr7_2:63299765-63299784 | None:intergenic | 45.0% |
| ACCAACAAGAAAGTCGGAAC+TGG | + | chr7_2:63299922-63299941 | None:intergenic | 45.0% | |
| TAATCGTTGCAGCTTCGATG+AGG | - | chr7_2:63300034-63300053 | Msa1068330:CDS | 45.0% | |
| GACACCTTGCACTCAACTAT+AGG | - | chr7_2:63300711-63300730 | Msa1068330:intron | 45.0% | |
| GGATCCTATAGTTGAGTGCA+AGG | + | chr7_2:63300718-63300737 | None:intergenic | 45.0% | |
| TTTCTTCCAGCAGAGGAAGT+GGG | + | chr7_2:63300740-63300759 | None:intergenic | 45.0% | |
| ATTTCTTCCAGCAGAGGAAG+TGG | + | chr7_2:63300741-63300760 | None:intergenic | 45.0% | |
| ! | GCAACCCAACCTGAATTTTC+TGG | - | chr7_2:63301048-63301067 | Msa1068330:intron | 45.0% |
| CACAGCCAGAAAATTCAGGT+TGG | + | chr7_2:63301056-63301075 | None:intergenic | 45.0% | |
| ! | TGGCTGTGTTTGGTTTAGGT+TGG | - | chr7_2:63301068-63301087 | Msa1068330:intron | 45.0% |
| CAAAAACCTAGTCTCCCCTT+TGG | + | chr7_2:63301240-63301259 | None:intergenic | 45.0% | |
| ! | CAAAGGGGAGACTAGGTTTT+TGG | - | chr7_2:63301238-63301257 | Msa1068330:intron | 45.0% |
| ! | AATTCTACAAGCATCGTCCG+CGG | + | chr7_2:63301572-63301591 | None:intergenic | 45.0% |
| ATTGGCAATGCAGAGAAGCT+AGG | - | chr7_2:63301715-63301734 | Msa1068330:intron | 45.0% | |
| GGACTCGCCATTTGATGTTT+AGG | - | chr7_2:63301757-63301776 | Msa1068330:CDS | 45.0% | |
| ! | GTCGGGTTCGTTTGTTAGGT+TGG | + | chr7_2:63298227-63298246 | None:intergenic | 50.0% |
| AGAGGTCGGGTTCGTTTGTT+AGG | + | chr7_2:63298231-63298250 | None:intergenic | 50.0% | |
| !! | TTATTCGGTTGGTGACTCGG+TGG | + | chr7_2:63298279-63298298 | None:intergenic | 50.0% |
| GAGTTCACGAAGAACGGCTT+TGG | + | chr7_2:63298419-63298438 | None:intergenic | 50.0% | |
| !! | GGCTTACGACGTTGATTCGT+TGG | - | chr7_2:63298563-63298582 | Msa1068330:three_prime_UTR | 50.0% |
| TTCGTTGGACAAATGCGCCA+AGG | - | chr7_2:63298578-63298597 | Msa1068330:three_prime_UTR | 50.0% | |
| AAATGCGCCAAGGTTCTTCC+CGG | - | chr7_2:63298588-63298607 | Msa1068330:three_prime_UTR | 50.0% | |
| ! | AGGAACCATGCTGCGGTTTT+CGG | - | chr7_2:63299047-63299066 | Msa1068330:intron | 50.0% |
| CTTAACCGAAAACCGCAGCA+TGG | + | chr7_2:63299055-63299074 | None:intergenic | 50.0% | |
| ! | TGCTGCGGTTTTCGGTTAAG+AGG | - | chr7_2:63299055-63299074 | Msa1068330:intron | 50.0% |
| GCCAGTTCCGACTTTCTTGT+TGG | - | chr7_2:63299918-63299937 | Msa1068330:intron | 50.0% | |
| TTCTTCCAGCAGAGGAAGTG+GGG | + | chr7_2:63300739-63300758 | None:intergenic | 50.0% | |
| !! | GTTGGGTTTGCTGATGAACC+AGG | - | chr7_2:63301090-63301109 | Msa1068330:intron | 50.0% |
| TTAGGGGTAAACATGGGTCC+TGG | + | chr7_2:63301111-63301130 | None:intergenic | 50.0% | |
| GTGTTTCCAAAGGGGAGACT+AGG | - | chr7_2:63301231-63301250 | Msa1068330:intron | 50.0% | |
| TTGGGTCTAACTTCGTGTGG+AGG | - | chr7_2:63301257-63301276 | Msa1068330:intron | 50.0% | |
| GTGTGGAGGACCCAAAAGTA+AGG | - | chr7_2:63301271-63301290 | Msa1068330:intron | 50.0% | |
| !! | TTGGTGACTCGGTGGAGAAG+AGG | + | chr7_2:63298271-63298290 | None:intergenic | 55.0% |
| AGGATCCCCACTTCCTCTGC+TGG | - | chr7_2:63300731-63300750 | Msa1068330:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 63298222 | 63302178 | 63298222 | ID=Msa1068330;Name=Msa1068330 |
| chr7_2 | mRNA | 63298222 | 63302178 | 63298222 | ID=Msa1068330-mRNA-1;Parent=Msa1068330;Name=Msa1068330-mRNA-1;_AED=0.09;_eAED=0.09;_QI=124|1|1|1|0.71|0.62|8|472|228 |
| chr7_2 | exon | 63298222 | 63298283 | 63298222 | ID=Msa1068330-mRNA-1:exon:13106;Parent=Msa1068330-mRNA-1 |
| chr7_2 | exon | 63298308 | 63298672 | 63298308 | ID=Msa1068330-mRNA-1:exon:13105;Parent=Msa1068330-mRNA-1 |
| chr7_2 | exon | 63299987 | 63300161 | 63299987 | ID=Msa1068330-mRNA-1:exon:13104;Parent=Msa1068330-mRNA-1 |
| chr7_2 | exon | 63300250 | 63300354 | 63300250 | ID=Msa1068330-mRNA-1:exon:13103;Parent=Msa1068330-mRNA-1 |
| chr7_2 | exon | 63301324 | 63301403 | 63301324 | ID=Msa1068330-mRNA-1:exon:13102;Parent=Msa1068330-mRNA-1 |
| chr7_2 | exon | 63301513 | 63301622 | 63301513 | ID=Msa1068330-mRNA-1:exon:13101;Parent=Msa1068330-mRNA-1 |
| chr7_2 | exon | 63301716 | 63301867 | 63301716 | ID=Msa1068330-mRNA-1:exon:13100;Parent=Msa1068330-mRNA-1 |
| chr7_2 | exon | 63301945 | 63302178 | 63301945 | ID=Msa1068330-mRNA-1:exon:13099;Parent=Msa1068330-mRNA-1 |
| chr7_2 | five_prime_UTR | 63302055 | 63302178 | 63302055 | ID=Msa1068330-mRNA-1:five_prime_utr;Parent=Msa1068330-mRNA-1 |
| chr7_2 | CDS | 63301945 | 63302054 | 63301945 | ID=Msa1068330-mRNA-1:cds;Parent=Msa1068330-mRNA-1 |
| chr7_2 | CDS | 63301716 | 63301867 | 63301716 | ID=Msa1068330-mRNA-1:cds;Parent=Msa1068330-mRNA-1 |
| chr7_2 | CDS | 63301513 | 63301622 | 63301513 | ID=Msa1068330-mRNA-1:cds;Parent=Msa1068330-mRNA-1 |
| chr7_2 | CDS | 63301324 | 63301403 | 63301324 | ID=Msa1068330-mRNA-1:cds;Parent=Msa1068330-mRNA-1 |
| chr7_2 | CDS | 63300250 | 63300354 | 63300250 | ID=Msa1068330-mRNA-1:cds;Parent=Msa1068330-mRNA-1 |
| chr7_2 | CDS | 63300032 | 63300161 | 63300032 | ID=Msa1068330-mRNA-1:cds;Parent=Msa1068330-mRNA-1 |
| chr7_2 | three_prime_UTR | 63299987 | 63300031 | 63299987 | ID=Msa1068330-mRNA-1:three_prime_utr;Parent=Msa1068330-mRNA-1 |
| chr7_2 | three_prime_UTR | 63298308 | 63298672 | 63298308 | ID=Msa1068330-mRNA-1:three_prime_utr;Parent=Msa1068330-mRNA-1 |
| chr7_2 | three_prime_UTR | 63298222 | 63298283 | 63298222 | ID=Msa1068330-mRNA-1:three_prime_utr;Parent=Msa1068330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
