AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1265630


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1265630 MtrunA17_Chr4g0071621 94.203 414 19 2 1 414 1 409 0.0 692
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1265630 AT5G57120.2 52.518 139 52 3 283 414 168 299 1.25e-32 125

Find 96 sgRNAs with CRISPR-Local

Find 349 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGCTTCTGTTCAGAGTTT+TGG 0.148789 8_2:+70069916 None:intergenic
TCATCTTCTGTTCACTGGTT+AGG 0.212343 8_2:+70070071 None:intergenic
AGAGATGTGCCGCAAATATT+TGG 0.244302 8_2:-70068328 Msa1265630:CDS
AGAAAATATGAGTGAATCTA+AGG 0.253918 8_2:-70066883 Msa1265630:CDS
ATAGGTCCCACGTTTCTTCT+TGG 0.273117 8_2:+70064515 None:intergenic
TTGATACCTGATGGATTTGC+AGG 0.274555 8_2:+70070011 None:intergenic
TTTAGAATCTTTCTTCTCTT+CGG 0.275506 8_2:+70066989 None:intergenic
CCAATCAATTGCTCTTTACT+TGG 0.280678 8_2:-70069880 Msa1265630:CDS
CGACCAATTTCTAAAGAAAA+TGG 0.291399 8_2:-70066957 Msa1265630:CDS
TTAGAATCTTTCTTCTCTTC+GGG 0.299169 8_2:+70066990 None:intergenic
TTGAAACAATATTGTTCATT+TGG 0.312566 8_2:-70064322 Msa1265630:three_prime_UTR
CATCTTCTGTTCACTGGTTA+GGG 0.312876 8_2:+70070072 None:intergenic
TTCTTCATCTGCCTTTATTT+CGG 0.320467 8_2:+70066923 None:intergenic
GCTTCTTCATTTGTTGCATC+GGG 0.340551 8_2:+70067017 None:intergenic
ATAGATGCCAAAGTTGAAAA+TGG 0.340694 8_2:-70067128 Msa1265630:CDS
TGCTTCTTCATTTGTTGCAT+CGG 0.340775 8_2:+70067016 None:intergenic
ATTTGTTGATGAGAGGCTTC+AGG 0.356972 8_2:-70065136 Msa1265630:CDS
AGAAGAAACGTGGGACCTAT+AGG 0.367724 8_2:-70064512 Msa1265630:CDS
GAAGAAACGTGGGACCTATA+GGG 0.375824 8_2:-70064511 Msa1265630:CDS
CCAAGTAAAGAGCAATTGAT+TGG 0.380181 8_2:+70069880 None:intergenic
GGCTTCAGGATAACTCATAT+TGG 0.387596 8_2:-70065122 Msa1265630:CDS
TGCTCTTTACTTGGAACGCT+CGG 0.400334 8_2:-70069871 Msa1265630:CDS
CCACAGTTGGTGACTCCAAT+TGG 0.405640 8_2:+70067324 None:intergenic
GATGGCGCCGAGAGTGGTTA+TGG 0.413963 8_2:-70065007 Msa1265630:CDS
CGTTGAAATGCTGCCTTCAC+TGG 0.414815 8_2:+70065180 None:intergenic
CTCAGCACCATTATCAACTT+TGG 0.421101 8_2:+70067262 None:intergenic
TGAACAAGATACCGAAATAA+AGG 0.423978 8_2:-70066934 Msa1265630:CDS
ACAGATGCCAAAGTTGATAA+TGG 0.427492 8_2:-70067269 Msa1265630:CDS
AGAAGATGAATTAGAGTGGT+TGG 0.430448 8_2:-70070057 Msa1265630:five_prime_UTR
CTAATTCATCTTCTGTTCAC+TGG 0.437183 8_2:+70070066 None:intergenic
CAAACGGGCTTTCTGAGAAT+GGG 0.440258 8_2:-70066839 Msa1265630:CDS
GCAAAAGCAGAAGAAATTCT+TGG 0.442256 8_2:-70064983 Msa1265630:CDS
TCAAACGGGCTTTCTGAGAA+TGG 0.443793 8_2:-70066840 Msa1265630:CDS
GACCAATCAGCAAAATCAAA+CGG 0.445985 8_2:-70066855 Msa1265630:CDS
ACCATGTTTCCAAATATTTG+CGG 0.446237 8_2:+70068319 None:intergenic
GCTTCAGGATAACTCATATT+GGG 0.455100 8_2:-70065121 Msa1265630:CDS
ATCAATAAGTCCACCCCTAT+AGG 0.468521 8_2:+70064497 None:intergenic
GGATTTGCAGGCATACGAAA+AGG 0.471205 8_2:+70070023 None:intergenic
TTATTCAGATGAGGAGTGAC+TGG 0.475043 8_2:-70064448 Msa1265630:exon
GGAGTGAAAGTGAAGAGGGT+TGG 0.475645 8_2:+70069981 None:intergenic
CGTATGCCTGCAAATCCATC+AGG 0.484539 8_2:-70070017 Msa1265630:CDS
AACAATAAGTCAAATATTGA+AGG 0.491836 8_2:-70067206 Msa1265630:CDS
TTCATCTCTCTTCAGTAGCA+AGG 0.496685 8_2:-70067640 Msa1265630:intron
ACCAATCAGCAAAATCAAAC+GGG 0.497516 8_2:-70066854 Msa1265630:CDS
AGTTACAGAAAATAAAGTTA+AGG 0.498586 8_2:-70067162 Msa1265630:CDS
GAAGATGAATTAGAGTGGTT+GGG 0.506631 8_2:-70070056 Msa1265630:five_prime_UTR
AAGATAAGTCAATTAGTGAA+GGG 0.507809 8_2:-70067064 Msa1265630:CDS
TAATGTGGAAGACAACCAAT+TGG 0.510929 8_2:-70067339 Msa1265630:CDS
AAAGATAAGTCAATTAGTGA+AGG 0.516572 8_2:-70067065 Msa1265630:CDS
CTGCAGGATGGCGCCGAGAG+TGG 0.518486 8_2:-70065013 Msa1265630:intron
AATAATTAAACTTAACTGAG+TGG 0.520249 8_2:+70064466 None:intergenic
GCTCTTTACTTGGAACGCTC+GGG 0.525363 8_2:-70069870 Msa1265630:CDS
GATGAATTAGAGTGGTTGGG+TGG 0.531287 8_2:-70070053 Msa1265630:five_prime_UTR
GGGGATGCAAAAGAGCAGAT+TGG 0.539281 8_2:-70067044 Msa1265630:CDS
GGTTACAGAAAACAAAGTTA+AGG 0.544978 8_2:-70067303 Msa1265630:CDS
ACAATAAGTCAAATATTGAA+GGG 0.546642 8_2:-70067205 Msa1265630:CDS
GAAATTCTTGGTCAAGTCAG+AGG 0.547509 8_2:-70064971 Msa1265630:CDS
GCCGCAAATATTTGGAAACA+TGG 0.552046 8_2:-70068320 Msa1265630:intron
TAAGTTTAATTATTCAGATG+AGG 0.552944 8_2:-70064457 Msa1265630:CDS
AAGTAGAATTTGTTGATGAG+AGG 0.558430 8_2:-70065143 Msa1265630:CDS
ATAATTAAACTTAACTGAGT+GGG 0.560601 8_2:+70064467 None:intergenic
GATTTGCAGGCATACGAAAA+GGG 0.561553 8_2:+70070024 None:intergenic
AGATAAGTCAATTAGTGAAG+GGG 0.564373 8_2:-70067063 Msa1265630:CDS
AAGAAACGTGGGACCTATAG+GGG 0.566821 8_2:-70064510 Msa1265630:CDS
TGATAACACCGGCTTTAGCA+TGG 0.570584 8_2:+70064368 None:intergenic
CTTGAGCACCATGCTAAAGC+CGG 0.571283 8_2:-70064376 Msa1265630:three_prime_UTR
TCTCTCTGAAGCTAAAATTG+AGG 0.572494 8_2:-70069823 Msa1265630:intron
TGAATCTGTTGTTGATAATG+TGG 0.576162 8_2:-70067354 Msa1265630:CDS
GAAAATATGAGTGAATCTAA+GGG 0.576840 8_2:-70066882 Msa1265630:CDS
GTTTCTTCTTGGTCTTCTCG+TGG 0.577810 8_2:+70064526 None:intergenic
GACGAGGAGTGAAAGTGAAG+AGG 0.595704 8_2:+70069976 None:intergenic
ACGAGGAGTGAAAGTGAAGA+GGG 0.599283 8_2:+70069977 None:intergenic
CTTCTTCATTTGTTGCATCG+GGG 0.605174 8_2:+70067018 None:intergenic
GGATAACTCATATTGGGCAA+AGG 0.615077 8_2:-70065115 Msa1265630:intron
AATATGAGTGAATCTAAGGG+AGG 0.616915 8_2:-70066879 Msa1265630:CDS
TTCTTGGTCAAGTCAGAGGA+AGG 0.619626 8_2:-70064967 Msa1265630:intron
CAATAAGTCAAATATTGAAG+GGG 0.625288 8_2:-70067204 Msa1265630:CDS
AGCAATCGAACCATGAAGAA+CGG 0.631910 8_2:-70069942 Msa1265630:CDS
CAGATGAAGAAACCAAACGC+AGG 0.637321 8_2:-70066911 Msa1265630:CDS
AAACGGGCTTTCTGAGAATG+GGG 0.639535 8_2:-70066838 Msa1265630:CDS
GAGAAGACCAAGAAGAAACG+TGG 0.639718 8_2:-70064522 Msa1265630:CDS
TATTCAGATGAGGAGTGACT+GGG 0.640238 8_2:-70064447 Msa1265630:exon
ATGGTGCTGAGACAGAGAAA+CGG 0.644173 8_2:-70067250 Msa1265630:CDS
ATGCAGAACGATAATACAGA+GGG 0.648262 8_2:-70068369 Msa1265630:intron
CCAATTGGAGTCACCAACTG+TGG 0.648790 8_2:-70067324 Msa1265630:CDS
AATAAGTCAAATATTGAAGG+GGG 0.651885 8_2:-70067203 Msa1265630:CDS
GAACAGAAGATGAATTAGAG+TGG 0.654246 8_2:-70070061 Msa1265630:five_prime_UTR
AGAAGACCAAGAAGAAACGT+GGG 0.657801 8_2:-70064521 Msa1265630:CDS
AAACGTGGGACCTATAGGGG+TGG 0.658830 8_2:-70064507 Msa1265630:CDS
ATGGTGCTGAGACAGAGAAG+AGG 0.660400 8_2:-70067109 Msa1265630:CDS
AAAACATAAAGAATCATCTG+AGG 0.668418 8_2:-70066781 Msa1265630:intron
TTGCTTAACAAAACTTGACG+AGG 0.675556 8_2:+70069960 None:intergenic
TCAGATGAGGAGTGACTGGG+AGG 0.685329 8_2:-70064444 Msa1265630:exon
GATGCAGAACGATAATACAG+AGG 0.716767 8_2:-70068370 Msa1265630:intron
TAATACAGAGGGTTCCACAG+TGG 0.729759 8_2:-70068358 Msa1265630:CDS
CATCTCTTCTAGATCCACTG+TGG 0.742631 8_2:+70068344 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAATTCTGAATTTTTTT+TGG - chr8_2:70065334-70065353 Msa1265630:intron 10.0%
!!! TATAATATTTTGAATTTTTC+TGG - chr8_2:70065366-70065385 Msa1265630:intron 10.0%
!!! GAATTATTTATTTTTTCTAA+GGG - chr8_2:70066769-70066788 Msa1265630:intron 10.0%
!! TTTAATTGAAAATAAAAAGA+GGG + chr8_2:70067711-70067730 None:intergenic 10.0%
!!! TTTTAATTGAAAATAAAAAG+AGG + chr8_2:70067712-70067731 None:intergenic 10.0%
!! TTTATTTATTATTTCATTCT+TGG - chr8_2:70068969-70068988 Msa1265630:intron 10.0%
!! ACATTATAAAACAATTATAT+TGG + chr8_2:70069673-70069692 None:intergenic 10.0%
!! TAAAAGTTGACATATTTATA+GGG + chr8_2:70065077-70065096 None:intergenic 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG + chr8_2:70065137-70065156 None:intergenic 15.0%
!!! TGAAGATTGAAAATTTTATA+GGG - chr8_2:70065450-70065469 Msa1265630:intron 15.0%
!!! CGAATTATTTATTTTTTCTA+AGG - chr8_2:70066768-70066787 Msa1265630:intron 15.0%
!!! TTATTGTTCTTTTTCTTTTT+GGG + chr8_2:70067085-70067104 None:intergenic 15.0%
!! TTAATTGAAAATAAAAAGAG+GGG + chr8_2:70067710-70067729 None:intergenic 15.0%
!!! GAAAATTAAATTTTATACGA+GGG + chr8_2:70067801-70067820 None:intergenic 15.0%
!!! TGAAAATTAAATTTTATACG+AGG + chr8_2:70067802-70067821 None:intergenic 15.0%
!! TACTTAAACTTAATTTAAGT+AGG - chr8_2:70068173-70068192 Msa1265630:intron 15.0%
!! AACTTAAATTCAGTTTAAAT+AGG + chr8_2:70068402-70068421 None:intergenic 15.0%
!! TTTAAGAGAATTTATACAAA+AGG - chr8_2:70068645-70068664 Msa1265630:intron 15.0%
!! TTAAGAGAATTTATACAAAA+GGG - chr8_2:70068646-70068665 Msa1265630:intron 15.0%
!!! AGTCAACTATTTAATTTAAA+GGG + chr8_2:70068851-70068870 None:intergenic 15.0%
!!! TAGTCAACTATTTAATTTAA+AGG + chr8_2:70068852-70068871 None:intergenic 15.0%
!! AGATAAACATATAAAGAAAT+TGG + chr8_2:70068878-70068897 None:intergenic 15.0%
!!! ATTTTTAGTCATATGTATTT+AGG - chr8_2:70069025-70069044 Msa1265630:intron 15.0%
!!! ATCAAAATTTTGTTACATTA+TGG - chr8_2:70069954-70069973 Msa1265630:CDS 15.0%
!!! TATAATTGTAATGTTGCTTT+TGG - chr8_2:70064579-70064598 Msa1265630:intron 20.0%
!! AGAGTTTCTTAAAAATTCAT+GGG - chr8_2:70065034-70065053 Msa1265630:intron 20.0%
!! CTAAAAGTTGACATATTTAT+AGG + chr8_2:70065078-70065097 None:intergenic 20.0%
!!! AATATGTCAACTTTTAGTTT+TGG - chr8_2:70065081-70065100 Msa1265630:intron 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG + chr8_2:70065138-70065157 None:intergenic 20.0%
!!! AAATTTTCAATCACTACTTT+TGG - chr8_2:70065141-70065160 Msa1265630:CDS 20.0%
!!! ATATGAGTTTACTTTAAAAG+AGG - chr8_2:70065418-70065437 Msa1265630:intron 20.0%
!!! TATGAGTTTACTTTAAAAGA+GGG - chr8_2:70065419-70065438 Msa1265630:intron 20.0%
!!! AAATTTTCAATCTTCACTTT+TGG + chr8_2:70065446-70065465 None:intergenic 20.0%
!!! GTGAAGATTGAAAATTTTAT+AGG - chr8_2:70065449-70065468 Msa1265630:intron 20.0%
!! GAAAAGTTGACATATTTATA+GGG - chr8_2:70065510-70065529 Msa1265630:intron 20.0%
!!! TTTTGGGTTAAATATGTTTT+TGG + chr8_2:70065537-70065556 None:intergenic 20.0%
!! TTTCTATCTAGTAATTGATA+TGG + chr8_2:70066218-70066237 None:intergenic 20.0%
!!! ACAGTATGAAAATTTTATAG+CGG + chr8_2:70066298-70066317 None:intergenic 20.0%
!!! TTGCTTAAAACAATTTTCTA+TGG - chr8_2:70066347-70066366 Msa1265630:intron 20.0%
!!! TTTTACAGCATTTTATAGTA+TGG - chr8_2:70066413-70066432 Msa1265630:intron 20.0%
!!! CTTATTGTTCTTTTTCTTTT+TGG + chr8_2:70067086-70067105 None:intergenic 20.0%
!! AACAATAAGTCAAATATTGA+AGG - chr8_2:70067097-70067116 Msa1265630:CDS 20.0%
!! ACAATAAGTCAAATATTGAA+GGG - chr8_2:70067098-70067117 Msa1265630:CDS 20.0%
!! AGTTACAGAAAATAAAGTTA+AGG - chr8_2:70067141-70067160 Msa1265630:CDS 20.0%
!!! TTTCTTTTTCATTTTACGTT+TGG + chr8_2:70067221-70067240 None:intergenic 20.0%
!! AAAGAATACGTATAAAAAGA+GGG + chr8_2:70067683-70067702 None:intergenic 20.0%
!! TAAAGAATACGTATAAAAAG+AGG + chr8_2:70067684-70067703 None:intergenic 20.0%
!!! ATTTGTGTTTTTCTTGTTTA+TGG - chr8_2:70068011-70068030 Msa1265630:intron 20.0%
!! TGAAACTATCATTATTGAAA+AGG - chr8_2:70068479-70068498 Msa1265630:intron 20.0%
!!! TTTATACAAAAGGGTAATTT+TGG - chr8_2:70068655-70068674 Msa1265630:intron 20.0%
!!! TTGTATTTCTTATACAGTTT+TGG - chr8_2:70069002-70069021 Msa1265630:intron 20.0%
!! ATTATCTAAGAAATGTGTAT+GGG - chr8_2:70069258-70069277 Msa1265630:intron 20.0%
!! GAAATAAAATTGTTTCACTA+CGG + chr8_2:70069377-70069396 None:intergenic 20.0%
!! TTTAATACAAGTGCAAATAT+TGG + chr8_2:70069399-70069418 None:intergenic 20.0%
!!! ACCATCTTATTTTACTTTTT+TGG - chr8_2:70069721-70069740 Msa1265630:intron 20.0%
!! ACCAAAAAAGTAAAATAAGA+TGG + chr8_2:70069725-70069744 None:intergenic 20.0%
!! ATAATTAAACTTAACTGAGT+GGG + chr8_2:70069839-70069858 None:intergenic 20.0%
!! AATAATTAAACTTAACTGAG+TGG + chr8_2:70069840-70069859 None:intergenic 20.0%
!! TAAGTTTAATTATTCAGATG+AGG - chr8_2:70069846-70069865 Msa1265630:CDS 20.0%
!!! TAACAAAATTTTGATAACAC+CGG + chr8_2:70069949-70069968 None:intergenic 20.0%
!! TTGAAACAATATTGTTCATT+TGG - chr8_2:70069981-70070000 Msa1265630:CDS 20.0%
!!! TTTTTCATTGTTTTTCTGCT+AGG - chr8_2:70064608-70064627 Msa1265630:intron 25.0%
! ACTTTAGTATATTAAGAGGA+TGG - chr8_2:70064861-70064880 Msa1265630:intron 25.0%
! CTTCATTCATGAAAAAAGTT+CGG - chr8_2:70064963-70064982 Msa1265630:intron 25.0%
! CAGAGTTTCTTAAAAATTCA+TGG - chr8_2:70065033-70065052 Msa1265630:intron 25.0%
!!! TCATGGGTTAAATATGTTTT+TGG - chr8_2:70065050-70065069 Msa1265630:intron 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG + chr8_2:70065479-70065498 None:intergenic 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG + chr8_2:70065478-70065497 None:intergenic 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG - chr8_2:70065478-70065497 Msa1265630:intron 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG - chr8_2:70065479-70065498 Msa1265630:intron 25.0%
! CGAAAAGTTGACATATTTAT+AGG - chr8_2:70065509-70065528 Msa1265630:intron 25.0%
! ATTTAACCCAAAATTCATTG+CGG - chr8_2:70065544-70065563 Msa1265630:intron 25.0%
! TAAGTAATTATGTGCATACA+TGG - chr8_2:70065772-70065791 Msa1265630:intron 25.0%
! TGTACTGTGTAGTTTATAAT+CGG + chr8_2:70066061-70066080 None:intergenic 25.0%
!! TAATTGATATGGTTGATACA+TGG + chr8_2:70066207-70066226 None:intergenic 25.0%
!! GCTATAAAATTTTCATACTG+TGG - chr8_2:70066297-70066316 Msa1265630:intron 25.0%
!! ATATTGGCAATTTTATGTAG+CGG - chr8_2:70066321-70066340 Msa1265630:intron 25.0%
!! CTTAAAACAATTTTCTATGG+CGG - chr8_2:70066350-70066369 Msa1265630:intron 25.0%
! AATCTGATATTGAGAACTAT+GGG - chr8_2:70066531-70066550 Msa1265630:intron 25.0%
! ACAGAAATGACAATACTAAT+TGG + chr8_2:70066606-70066625 None:intergenic 25.0%
! ATGTTATAAACAAGAGAGAT+AGG + chr8_2:70066748-70066767 None:intergenic 25.0%
!! TTTCTTTTTCTTTTTTCCCT+TGG + chr8_2:70066915-70066934 None:intergenic 25.0%
! CAATAAGTCAAATATTGAAG+GGG - chr8_2:70067099-70067118 Msa1265630:CDS 25.0%
! AATAAGTCAAATATTGAAGG+GGG - chr8_2:70067100-70067119 Msa1265630:CDS 25.0%
! AAAGATAAGTCAATTAGTGA+AGG - chr8_2:70067238-70067257 Msa1265630:CDS 25.0%
! AAGATAAGTCAATTAGTGAA+GGG - chr8_2:70067239-70067258 Msa1265630:CDS 25.0%
!! TTTAGAATCTTTCTTCTCTT+CGG + chr8_2:70067317-70067336 None:intergenic 25.0%
!!! TCACCATTTTCTTTAGAAAT+TGG + chr8_2:70067352-70067371 None:intergenic 25.0%
! AGAAAATATGAGTGAATCTA+AGG - chr8_2:70067420-70067439 Msa1265630:CDS 25.0%
! GAAAATATGAGTGAATCTAA+GGG - chr8_2:70067421-70067440 Msa1265630:CDS 25.0%
! AAAACATAAAGAATCATCTG+AGG - chr8_2:70067522-70067541 Msa1265630:intron 25.0%
! AAGAATACGTATAAAAAGAG+GGG + chr8_2:70067682-70067701 None:intergenic 25.0%
! AAGAAATTTCGAAGCAAAAA+AGG - chr8_2:70067915-70067934 Msa1265630:intron 25.0%
! CATGTAAACTTAGTTTAAGT+AGG - chr8_2:70068124-70068143 Msa1265630:intron 25.0%
! CATGTAAACTTAGTTTAAGT+AGG - chr8_2:70068124-70068143 Msa1265630:intron 25.0%
! TTACATAGAATCATTGAACA+AGG + chr8_2:70068262-70068281 None:intergenic 25.0%
! ATTCTATGTAATCTCAGTTT+AGG - chr8_2:70068271-70068290 Msa1265630:intron 25.0%
! CTACTTAAACTAAGTTTACA+TGG + chr8_2:70068126-70068145 None:intergenic 25.0%
! CATGTAAACTTAGTTTAAGT+AGG - chr8_2:70068124-70068143 Msa1265630:intron 25.0%
! TATTCAAGAATTTATAGCAC+AGG + chr8_2:70068781-70068800 None:intergenic 25.0%
! TAAAACTTACCTAACATTTC+AGG - chr8_2:70068806-70068825 Msa1265630:intron 25.0%
! AACATAAATCTTAGTTTCAG+TGG + chr8_2:70069063-70069082 None:intergenic 25.0%
! ACTGAAACTAAGATTTATGT+TGG - chr8_2:70069062-70069081 Msa1265630:intron 25.0%
! ATTTCTTAGATAATGCAACT+GGG + chr8_2:70069252-70069271 None:intergenic 25.0%
! CATTATCTAAGAAATGTGTA+TGG - chr8_2:70069257-70069276 Msa1265630:intron 25.0%
! TTCATAGACAAGCTATAAAT+AGG - chr8_2:70069481-70069500 Msa1265630:intron 25.0%
!! TCTATGGAAAATTTGTTTGA+TGG - chr8_2:70069548-70069567 Msa1265630:intron 25.0%
!! CTATGGAAAATTTGTTTGAT+GGG - chr8_2:70069549-70069568 Msa1265630:intron 25.0%
! GATATATGTGTGAAAAATCT+GGG + chr8_2:70069600-70069619 None:intergenic 25.0%
!! CAGATTTTTCACACATATAT+CGG - chr8_2:70069599-70069618 Msa1265630:intron 25.0%
! GGTTTAGAAAAATGAATGAA+AGG + chr8_2:70069627-70069646 None:intergenic 25.0%
! AGCTGAATAAGACAATAAAA+GGG + chr8_2:70069648-70069667 None:intergenic 25.0%
! TAGCTGAATAAGACAATAAA+AGG + chr8_2:70069649-70069668 None:intergenic 25.0%
!!! TGTTTTGATTGCATATCAAA+TGG - chr8_2:70070087-70070106 Msa1265630:five_prime_UTR 25.0%
!!! ACTGGTTAGGGTTTATTTTA+GGG + chr8_2:70064222-70064241 None:intergenic 30.0%
! TTCAGAGAGAAACTTTTTGA+GGG + chr8_2:70064470-70064489 None:intergenic 30.0%
! GATTGAATTTAGGATCTGTT+TGG - chr8_2:70064663-70064682 Msa1265630:intron 30.0%
! AATTTAGGATCTGTTTGGAT+TGG - chr8_2:70064668-70064687 Msa1265630:intron 30.0%
GCTTATAGCTAATGTGAAAA+AGG - chr8_2:70064824-70064843 Msa1265630:intron 30.0%
TGTGAAAAAGGATATCACTT+TGG - chr8_2:70064836-70064855 Msa1265630:intron 30.0%
GGTGACTTTAGTATATTAAG+AGG - chr8_2:70064857-70064876 Msa1265630:intron 30.0%
TTATAGGGACTAAAAGTTGA+AGG + chr8_2:70065465-70065484 None:intergenic 30.0%
TTATAGGGACTAAAAGTTGA+AGG - chr8_2:70065465-70065484 Msa1265630:intron 30.0%
ACATTCGCAATGCAAATATA+TGG + chr8_2:70065675-70065694 None:intergenic 30.0%
! AGAATCTGTTTTACTCAGTT+TGG + chr8_2:70065738-70065757 None:intergenic 30.0%
TCACCGTTCAATAACAAATT+TGG - chr8_2:70065870-70065889 Msa1265630:intron 30.0%
!! CAGCCAAATTTGTTATTGAA+CGG + chr8_2:70065876-70065895 None:intergenic 30.0%
ACCATGTTTCCAAATATTTG+CGG + chr8_2:70065987-70066006 None:intergenic 30.0%
! AATCTTGAAAGTGTAGAACA+AGG + chr8_2:70066025-70066044 None:intergenic 30.0%
! GTTCTACACTTTCAAGATTT+TGG - chr8_2:70066026-70066045 Msa1265630:intron 30.0%
CAATTACTAGATAGAAAGCT+TGG - chr8_2:70066221-70066240 Msa1265630:intron 30.0%
! ATTTTCATACTGTGGCATAT+TGG - chr8_2:70066305-70066324 Msa1265630:intron 30.0%
AAATGCTATAGCAAGATCAT+AGG + chr8_2:70066487-70066506 None:intergenic 30.0%
CAATCTGATATTGAGAACTA+TGG - chr8_2:70066530-70066549 Msa1265630:intron 30.0%
AATGACAATACTAATTGGTG+TGG + chr8_2:70066601-70066620 None:intergenic 30.0%
TTTCAATTACTGCTAATTGC+AGG - chr8_2:70066860-70066879 Msa1265630:CDS 30.0%
! GGATTTTTCCTCATCATTTT+TGG + chr8_2:70066894-70066913 None:intergenic 30.0%
AAATGATGAGGAAAAATCCA+AGG - chr8_2:70066895-70066914 Msa1265630:CDS 30.0%
AATGATGAGGAAAAATCCAA+GGG - chr8_2:70066896-70066915 Msa1265630:CDS 30.0%
!! TGAATCTGTTGTTGATAATG+TGG - chr8_2:70066949-70066968 Msa1265630:CDS 30.0%
GGTTACAGAAAACAAAGTTA+AGG - chr8_2:70067000-70067019 Msa1265630:CDS 30.0%
!!! GTTCTTTTTCTTTTTGGGTT+TGG + chr8_2:70067080-70067099 None:intergenic 30.0%
! ATTTTCAACTTTGGCATCTA+TGG + chr8_2:70067176-70067195 None:intergenic 30.0%
ATAGATGCCAAAGTTGAAAA+TGG - chr8_2:70067175-70067194 Msa1265630:CDS 30.0%
AGATAAGTCAATTAGTGAAG+GGG - chr8_2:70067240-70067259 Msa1265630:CDS 30.0%
TTAGAATCTTTCTTCTCTTC+GGG + chr8_2:70067316-70067335 None:intergenic 30.0%
! CGACCAATTTCTAAAGAAAA+TGG - chr8_2:70067346-70067365 Msa1265630:CDS 30.0%
TGAACAAGATACCGAAATAA+AGG - chr8_2:70067369-70067388 Msa1265630:CDS 30.0%
! TTCTTCATCTGCCTTTATTT+CGG + chr8_2:70067383-70067402 None:intergenic 30.0%
! ATTTTCTATTTTCCTGCGTT+TGG + chr8_2:70067407-70067426 None:intergenic 30.0%
ATTCTCTCTGAATATGTACA+TGG - chr8_2:70067564-70067583 Msa1265630:intron 30.0%
AATTACACCCTTTATAATCC+TGG - chr8_2:70067751-70067770 Msa1265630:intron 30.0%
! AAGACGGAAGATAGATTTTT+GGG + chr8_2:70067854-70067873 None:intergenic 30.0%
! AAAGACGGAAGATAGATTTT+TGG + chr8_2:70067855-70067874 None:intergenic 30.0%
!! CTTTGAAATCTTGCATAGAA+GGG + chr8_2:70067898-70067917 None:intergenic 30.0%
!! TCTTTGAAATCTTGCATAGA+AGG + chr8_2:70067899-70067918 None:intergenic 30.0%
AATTTCGAAGCAAAAAAGGT+TGG - chr8_2:70067919-70067938 Msa1265630:intron 30.0%
ATCGATTATGTTCTTGTCAT+GGG - chr8_2:70067958-70067977 Msa1265630:intron 30.0%
!! TCCTAATTCTAAGCTTTTTC+TGG - chr8_2:70067983-70068002 Msa1265630:intron 30.0%
!! CCTAATTCTAAGCTTTTTCT+GGG - chr8_2:70067984-70068003 Msa1265630:intron 30.0%
AGGTATGTACATGTAAACTT+AGG - chr8_2:70068291-70068310 Msa1265630:intron 30.0%
TGATGTTCAATCAATCTATG+TGG + chr8_2:70068571-70068590 None:intergenic 30.0%
ACATAGATTGATTGAACATC+AGG - chr8_2:70068570-70068589 Msa1265630:intron 30.0%
AGTGACTATGAATGAAATCA+AGG - chr8_2:70068621-70068640 Msa1265630:intron 30.0%
ACACAATAACCTGAAATGTT+AGG + chr8_2:70068818-70068837 None:intergenic 30.0%
!! AAGTAGAATTTGTTGATGAG+AGG - chr8_2:70069160-70069179 Msa1265630:intron 30.0%
! TGATATGTTTTCCATGCATT+TGG - chr8_2:70069221-70069240 Msa1265630:intron 30.0%
CATTTCTTAGATAATGCAAC+TGG + chr8_2:70069253-70069272 None:intergenic 30.0%
! TTTGTCTAGTGAGTTTTCTA+TGG - chr8_2:70069532-70069551 Msa1265630:intron 30.0%
CGATATATGTGTGAAAAATC+TGG + chr8_2:70069601-70069620 None:intergenic 30.0%
ACACCAAATATTTCTCTTAC+AGG - chr8_2:70069746-70069765 Msa1265630:intron 30.0%
CACCAAATATTTCTCTTACA+GGG - chr8_2:70069747-70069766 Msa1265630:intron 30.0%
ATCCCTGTAAGAGAAATATT+TGG + chr8_2:70069752-70069771 None:intergenic 30.0%
! CAAAATTTTGCTACATTACG+AGG - chr8_2:70070054-70070073 Msa1265630:five_prime_UTR 30.0%
!! CACTGGTTAGGGTTTATTTT+AGG + chr8_2:70064223-70064242 None:intergenic 35.0%
CTAATTCATCTTCTGTTCAC+TGG + chr8_2:70064240-70064259 None:intergenic 35.0%
GAACAGAAGATGAATTAGAG+TGG - chr8_2:70064242-70064261 Msa1265630:three_prime_UTR 35.0%
AGAAGATGAATTAGAGTGGT+TGG - chr8_2:70064246-70064265 Msa1265630:three_prime_UTR 35.0%
GAAGATGAATTAGAGTGGTT+GGG - chr8_2:70064247-70064266 Msa1265630:three_prime_UTR 35.0%
! GGAATTCTTTTGATACCTGA+TGG + chr8_2:70064304-70064323 None:intergenic 35.0%
TTGCTTAACAAAACTTGACG+AGG + chr8_2:70064346-70064365 None:intergenic 35.0%
CCAAGTAAAGAGCAATTGAT+TGG + chr8_2:70064426-70064445 None:intergenic 35.0%
CCAATCAATTGCTCTTTACT+TGG - chr8_2:70064423-70064442 Msa1265630:three_prime_UTR 35.0%
!! GAGAAACTTTTTGAGGGTTT+TGG + chr8_2:70064464-70064483 None:intergenic 35.0%
! CTTCAGAGAGAAACTTTTTG+AGG + chr8_2:70064471-70064490 None:intergenic 35.0%
!! TCTCTCTGAAGCTAAAATTG+AGG - chr8_2:70064480-70064499 Msa1265630:CDS 35.0%
! TCTGAAGCTAAAATTGAGGT+GGG - chr8_2:70064484-70064503 Msa1265630:CDS 35.0%
TCACTTTCCATTCATTCGTT+TGG - chr8_2:70064507-70064526 Msa1265630:CDS 35.0%
! GAAGCATCTCGATTGAATTT+AGG - chr8_2:70064653-70064672 Msa1265630:intron 35.0%
AATAAGCTGAAAGCAGCTTA+TGG + chr8_2:70064771-70064790 None:intergenic 35.0%
GCTGTTTACATGAGCTATTT+CGG + chr8_2:70064806-70064825 None:intergenic 35.0%
TGCGAATGTCATCTAAATTG+AGG - chr8_2:70065686-70065705 Msa1265630:intron 35.0%
TTATGTGCATACATGGCAAA+AGG - chr8_2:70065779-70065798 Msa1265630:intron 35.0%
TATGGAATACAGAGGAATTC+TGG + chr8_2:70065835-70065854 None:intergenic 35.0%
!! TTTGTTATTGAACGGTGAGA+AGG + chr8_2:70065868-70065887 None:intergenic 35.0%
CGTTCAATAACAAATTTGGC+TGG - chr8_2:70065874-70065893 Msa1265630:intron 35.0%
TATCGTTCTGCATCAACAAA+AGG + chr8_2:70065927-70065946 None:intergenic 35.0%
ATGCAGAACGATAATACAGA+GGG - chr8_2:70065934-70065953 Msa1265630:intron 35.0%
AGTGTACAGTTTACAGGATT+AGG + chr8_2:70066089-70066108 None:intergenic 35.0%
! TAAGAACAGTTTTGCACTAG+TGG + chr8_2:70066124-70066143 None:intergenic 35.0%
TGTATAAAGTACAGTGTGAC+TGG - chr8_2:70066157-70066176 Msa1265630:intron 35.0%
! GTGCTACTAACAATTATGAC+TGG + chr8_2:70066248-70066267 None:intergenic 35.0%
GGTCTGAAGAATACAAATGT+AGG + chr8_2:70066448-70066467 None:intergenic 35.0%
ATAGCAAGATCATAGGTAGT+GGG + chr8_2:70066480-70066499 None:intergenic 35.0%
TATAGCAAGATCATAGGTAG+TGG + chr8_2:70066481-70066500 None:intergenic 35.0%
! TGATCTTGCTATAGCATTTG+TGG - chr8_2:70066488-70066507 Msa1265630:intron 35.0%
! GATCTTGCTATAGCATTTGT+GGG - chr8_2:70066489-70066508 Msa1265630:intron 35.0%
! ATCTTGCTATAGCATTTGTG+GGG - chr8_2:70066490-70066509 Msa1265630:intron 35.0%
! ATCAATGATCAAAAAGCGCA+AGG - chr8_2:70066700-70066719 Msa1265630:intron 35.0%
! ACAAGAGAGATAGGTTTTCA+AGG + chr8_2:70066739-70066758 None:intergenic 35.0%
TCGTGGCGATTAAATCTTAA+TGG - chr8_2:70066832-70066851 Msa1265630:CDS 35.0%
TGGCGATTAAATCTTAATGG+TGG - chr8_2:70066835-70066854 Msa1265630:CDS 35.0%
TAATGTGGAAGACAACCAAT+TGG - chr8_2:70066964-70066983 Msa1265630:CDS 35.0%
! TTGTTTTCTGTAACCACAGT+TGG + chr8_2:70066995-70067014 None:intergenic 35.0%
!! ACAGATGCCAAAGTTGATAA+TGG - chr8_2:70067034-70067053 Msa1265630:CDS 35.0%
! TGCTTCTTCATTTGTTGCAT+CGG + chr8_2:70067290-70067309 None:intergenic 35.0%
AATATGAGTGAATCTAAGGG+AGG - chr8_2:70067424-70067443 Msa1265630:CDS 35.0%
GACCAATCAGCAAAATCAAA+CGG - chr8_2:70067448-70067467 Msa1265630:intron 35.0%
ACCAATCAGCAAAATCAAAC+GGG - chr8_2:70067449-70067468 Msa1265630:intron 35.0%
! ATTTCAAAGTGCCTATCCAT+TGG + chr8_2:70067601-70067620 None:intergenic 35.0%
GGTGTAACCAGGATTATAAA+GGG + chr8_2:70067761-70067780 None:intergenic 35.0%
! AGGGTAATTTTGTCATTCTG+GGG + chr8_2:70067782-70067801 None:intergenic 35.0%
! GAGGGTAATTTTGTCATTCT+GGG + chr8_2:70067783-70067802 None:intergenic 35.0%
AAAGTCTCTTCCTTCTTTCT+TGG - chr8_2:70067823-70067842 Msa1265630:intron 35.0%
GATCGATTATGTTCTTGTCA+TGG - chr8_2:70067957-70067976 Msa1265630:intron 35.0%
CCCAGAAAAAGCTTAGAATT+AGG + chr8_2:70067987-70068006 None:intergenic 35.0%
TTTAGATGCACACTTAAACG+CGG + chr8_2:70068232-70068251 None:intergenic 35.0%
CGGTTTCAATTTACATGTTG+AGG + chr8_2:70068427-70068446 None:intergenic 35.0%
TTGTTCAACAGCATGTACAA+CGG + chr8_2:70068447-70068466 None:intergenic 35.0%
ATTCACACCTCAAATATTGC+TGG + chr8_2:70068716-70068735 None:intergenic 35.0%
!! TTTCAGGTTATTGTGTTTGC+TGG - chr8_2:70068822-70068841 Msa1265630:intron 35.0%
CTTAGTTTCAGTGGTGAAAT+TGG + chr8_2:70069054-70069073 None:intergenic 35.0%
GCTTCAGGATAACTCATATT+GGG - chr8_2:70069182-70069201 Msa1265630:intron 35.0%
GCAAAAGCAGAAGAAATTCT+TGG - chr8_2:70069320-70069339 Msa1265630:intron 35.0%
CTATAAATAGGTCATGCTGT+TGG - chr8_2:70069493-70069512 Msa1265630:intron 35.0%
! CATCTTCTGTTCACTGGTTA+GGG + chr8_2:70064234-70064253 None:intergenic 40.0%
! TCATCTTCTGTTCACTGGTT+AGG + chr8_2:70064235-70064254 None:intergenic 40.0%
GATTTGCAGGCATACGAAAA+GGG + chr8_2:70064282-70064301 None:intergenic 40.0%
!! TTGATACCTGATGGATTTGC+AGG + chr8_2:70064295-70064314 None:intergenic 40.0%
AGCAATCGAACCATGAAGAA+CGG - chr8_2:70064361-70064380 Msa1265630:three_prime_UTR 40.0%
! CTGCTTCTGTTCAGAGTTTT+GGG + chr8_2:70064389-70064408 None:intergenic 40.0%
! TCTGCTTCTGTTCAGAGTTT+TGG + chr8_2:70064390-70064409 None:intergenic 40.0%
!! CTCTGAAGCTAAAATTGAGG+TGG - chr8_2:70064483-70064502 Msa1265630:CDS 40.0%
ACAGTGTCCAAACGAATGAA+TGG + chr8_2:70064517-70064536 None:intergenic 40.0%
TACACATCTGTGAAACTGCT+TGG - chr8_2:70064715-70064734 Msa1265630:intron 40.0%
AAACTGCTTGGAAGAGCTTA+TGG - chr8_2:70064727-70064746 Msa1265630:intron 40.0%
TCCAGACAAGAGAGAATGAT+CGG - chr8_2:70064905-70064924 Msa1265630:intron 40.0%
! TCAGCACCGCAATGAATTTT+GGG + chr8_2:70065553-70065572 None:intergenic 40.0%
GATGCAGAACGATAATACAG+AGG - chr8_2:70065933-70065952 Msa1265630:intron 40.0%
AGAGATGTGCCGCAAATATT+TGG - chr8_2:70065975-70065994 Msa1265630:intron 40.0%
GCCGCAAATATTTGGAAACA+TGG - chr8_2:70065983-70066002 Msa1265630:intron 40.0%
TGTAGAACAAGGCTAAGGTT+GGG + chr8_2:70066014-70066033 None:intergenic 40.0%
! GAAAGTGTAGAACAAGGCTA+AGG + chr8_2:70066019-70066038 None:intergenic 40.0%
CTTGTCAGTGTACAGTTTAC+AGG + chr8_2:70066095-70066114 None:intergenic 40.0%
TAGCAGTGAAAAGTAGCAGT+TGG - chr8_2:70066272-70066291 Msa1265630:intron 40.0%
ATGCTGTAAAATAGCAGCCA+TGG + chr8_2:70066404-70066423 None:intergenic 40.0%
CTGATATTGAGAACTATGGG+AGG - chr8_2:70066534-70066553 Msa1265630:intron 40.0%
TTCATCTCTCTTCAGTAGCA+AGG - chr8_2:70066663-70066682 Msa1265630:intron 40.0%
TTCTCTTGCTTCTTGAATCG+TGG - chr8_2:70066815-70066834 Msa1265630:CDS 40.0%
ATTACTGCTAATTGCAGGTG+TGG - chr8_2:70066865-70066884 Msa1265630:CDS 40.0%
TGTGGACTCCAAAAATGATG+AGG - chr8_2:70066883-70066902 Msa1265630:CDS 40.0%
CTCAGCACCATTATCAACTT+TGG + chr8_2:70067044-70067063 None:intergenic 40.0%
! CTCAGCACCATTTTCAACTT+TGG + chr8_2:70067185-70067204 None:intergenic 40.0%
! CTTCTTCATTTGTTGCATCG+GGG + chr8_2:70067288-70067307 None:intergenic 40.0%
! GCTTCTTCATTTGTTGCATC+GGG + chr8_2:70067289-70067308 None:intergenic 40.0%
GGGTGTAACCAGGATTATAA+AGG + chr8_2:70067762-70067781 None:intergenic 40.0%
! CGAGGGTAATTTTGTCATTC+TGG + chr8_2:70067784-70067803 None:intergenic 40.0%
TTGGGTGTAACCAAGAAAGA+AGG + chr8_2:70067836-70067855 None:intergenic 40.0%
TCTGCTTGAAGAAGGAAAGA+CGG + chr8_2:70067870-70067889 None:intergenic 40.0%
GGGATAAATCTGCTTGAAGA+AGG + chr8_2:70067878-70067897 None:intergenic 40.0%
AGGATCGTTTGATCGTTTGT+GGG - chr8_2:70068590-70068609 Msa1265630:intron 40.0%
GGTGTAACCAGCAATATTTG+AGG - chr8_2:70068706-70068725 Msa1265630:intron 40.0%
AGAATTTATAGCACAGGCTG+AGG + chr8_2:70068775-70068794 None:intergenic 40.0%
ATTGCAGCAAAAACCAGTGA+AGG - chr8_2:70069110-70069129 Msa1265630:intron 40.0%
! ATTTGTTGATGAGAGGCTTC+AGG - chr8_2:70069167-70069186 Msa1265630:intron 40.0%
GGCTTCAGGATAACTCATAT+TGG - chr8_2:70069181-70069200 Msa1265630:intron 40.0%
GGATAACTCATATTGGGCAA+AGG - chr8_2:70069188-70069207 Msa1265630:intron 40.0%
! TTTTGCACCATAACCACTCT+CGG + chr8_2:70069306-70069325 None:intergenic 40.0%
GAAATTCTTGGTCAAGTCAG+AGG - chr8_2:70069332-70069351 Msa1265630:intron 40.0%
AGAAGACCAAGAAGAAACGT+GGG - chr8_2:70069782-70069801 Msa1265630:intron 40.0%
ATCAATAAGTCCACCCCTAT+AGG + chr8_2:70069809-70069828 None:intergenic 40.0%
TTATTCAGATGAGGAGTGAC+TGG - chr8_2:70069855-70069874 Msa1265630:CDS 40.0%
TATTCAGATGAGGAGTGACT+GGG - chr8_2:70069856-70069875 Msa1265630:CDS 40.0%
GATGAATTAGAGTGGTTGGG+TGG - chr8_2:70064250-70064269 Msa1265630:three_prime_UTR 45.0%
GGATTTGCAGGCATACGAAA+AGG + chr8_2:70064283-70064302 None:intergenic 45.0%
ACGAGGAGTGAAAGTGAAGA+GGG + chr8_2:70064329-70064348 None:intergenic 45.0%
!!! GTTTTGGGTTCCGTTCTTCA+TGG + chr8_2:70064374-70064393 None:intergenic 45.0%
TGCTCTTTACTTGGAACGCT+CGG - chr8_2:70064432-70064451 Msa1265630:three_prime_UTR 45.0%
ACCGATCATTCTCTCTTGTC+TGG + chr8_2:70064909-70064928 None:intergenic 45.0%
! CTCAGCACCGCAATGAATTT+TGG + chr8_2:70065554-70065573 None:intergenic 45.0%
! CAAAATTCATTGCGGTGCTG+AGG - chr8_2:70065552-70065571 Msa1265630:intron 45.0%
GACACGGATATGGAATACAG+AGG + chr8_2:70065843-70065862 None:intergenic 45.0%
TGAGAAGGAAGACACGGATA+TGG + chr8_2:70065853-70065872 None:intergenic 45.0%
TAATACAGAGGGTTCCACAG+TGG - chr8_2:70065945-70065964 Msa1265630:intron 45.0%
CATCTCTTCTAGATCCACTG+TGG + chr8_2:70065962-70065981 None:intergenic 45.0%
GTGTAGAACAAGGCTAAGGT+TGG + chr8_2:70066015-70066034 None:intergenic 45.0%
TGGCCATTGTCTCATGTTGT+TGG - chr8_2:70066177-70066196 Msa1265630:intron 45.0%
GGCCATTGTCTCATGTTGTT+GGG - chr8_2:70066178-70066197 Msa1265630:intron 45.0%
GCCATTGTCTCATGTTGTTG+GGG - chr8_2:70066179-70066198 Msa1265630:intron 45.0%
TCCCCAACAACATGAGACAA+TGG + chr8_2:70066183-70066202 None:intergenic 45.0%
CTGTAAAATAGCAGCCATGG+CGG + chr8_2:70066401-70066420 None:intergenic 45.0%
!! ATAGGTAGTGGGATAACTGC+TGG + chr8_2:70066469-70066488 None:intergenic 45.0%
TGCTATAGCATTTGTGGGGT+TGG - chr8_2:70066494-70066513 Msa1265630:intron 45.0%
! ATGGTGCTGAGACAGAGAAA+CGG - chr8_2:70067053-70067072 Msa1265630:CDS 45.0%
CAGATGAAGAAACCAAACGC+AGG - chr8_2:70067392-70067411 Msa1265630:CDS 45.0%
!! GCCCGTTTGATTTTGCTGAT+TGG + chr8_2:70067453-70067472 None:intergenic 45.0%
! TCAAACGGGCTTTCTGAGAA+TGG - chr8_2:70067463-70067482 Msa1265630:intron 45.0%
! CAAACGGGCTTTCTGAGAAT+GGG - chr8_2:70067464-70067483 Msa1265630:intron 45.0%
! AAACGGGCTTTCTGAGAATG+GGG - chr8_2:70067465-70067484 Msa1265630:intron 45.0%
ATATGTACATGGCATCCTCC+TGG - chr8_2:70067575-70067594 Msa1265630:intron 45.0%
CAGGATCGTTTGATCGTTTG+TGG - chr8_2:70068589-70068608 Msa1265630:intron 45.0%
TAGAAAGCAGCAAGAAGAGC+AGG + chr8_2:70068938-70068957 None:intergenic 45.0%
TTCTTGGTCAAGTCAGAGGA+AGG - chr8_2:70069336-70069355 Msa1265630:intron 45.0%
! GTTTCTTCTTGGTCTTCTCG+TGG + chr8_2:70069780-70069799 None:intergenic 45.0%
GAGAAGACCAAGAAGAAACG+TGG - chr8_2:70069781-70069800 Msa1265630:intron 45.0%
ATAGGTCCCACGTTTCTTCT+TGG + chr8_2:70069791-70069810 None:intergenic 45.0%
AGAAGAAACGTGGGACCTAT+AGG - chr8_2:70069791-70069810 Msa1265630:intron 45.0%
GAAGAAACGTGGGACCTATA+GGG - chr8_2:70069792-70069811 Msa1265630:intron 45.0%
AAGAAACGTGGGACCTATAG+GGG - chr8_2:70069793-70069812 Msa1265630:intron 45.0%
!! TGATAACACCGGCTTTAGCA+TGG + chr8_2:70069938-70069957 None:intergenic 45.0%
!! ACAAATTTAAATTAAAAATA+GGG + chr8_2:70065168-70065187 None:intergenic 5.0%
!! TACAAATTTAAATTAAAAAT+AGG + chr8_2:70065169-70065188 None:intergenic 5.0%
!!! AAAAAATTCTAATTTTTTTT+AGG + chr8_2:70065241-70065260 None:intergenic 5.0%
!!! TAAAAATTTTTAAGAAAATT+TGG - chr8_2:70068684-70068703 Msa1265630:intron 5.0%
!!! AAAAATTTTTAAGAAAATTT+GGG - chr8_2:70068685-70068704 Msa1265630:intron 5.0%
CGTATGCCTGCAAATCCATC+AGG - chr8_2:70064286-70064305 Msa1265630:three_prime_UTR 50.0%
GGAGTGAAAGTGAAGAGGGT+TGG + chr8_2:70064325-70064344 None:intergenic 50.0%
GACGAGGAGTGAAAGTGAAG+AGG + chr8_2:70064330-70064349 None:intergenic 50.0%
GCTCTTTACTTGGAACGCTC+GGG - chr8_2:70064433-70064452 Msa1265630:exon 50.0%
GAACGGTGAGAAGGAAGACA+CGG + chr8_2:70065859-70065878 None:intergenic 50.0%
TTCACTACGTCATTCCGCCA+TGG - chr8_2:70066384-70066403 Msa1265630:intron 50.0%
!! CCACAGTTGGTGACTCCAAT+TGG + chr8_2:70066982-70067001 None:intergenic 50.0%
CCAATTGGAGTCACCAACTG+TGG - chr8_2:70066979-70066998 Msa1265630:CDS 50.0%
! ATGGTGCTGAGACAGAGAAG+AGG - chr8_2:70067194-70067213 Msa1265630:CDS 50.0%
GGGGATGCAAAAGAGCAGAT+TGG - chr8_2:70067259-70067278 Msa1265630:CDS 50.0%
! AAAGTGCCTATCCATTGGCC+AGG + chr8_2:70067596-70067615 None:intergenic 50.0%
!! TGTCATTCTGGGGTGTAACC+AGG + chr8_2:70067772-70067791 None:intergenic 50.0%
CGTTGAAATGCTGCCTTCAC+TGG + chr8_2:70069126-70069145 None:intergenic 50.0%
ACTGGGACACACCAAATGCA+TGG + chr8_2:70069235-70069254 None:intergenic 50.0%
GTATGGGTCTATCTCTCTGC+AGG - chr8_2:70069274-70069293 Msa1265630:intron 50.0%
CTTGAGCACCATGCTAAAGC+CGG - chr8_2:70069927-70069946 Msa1265630:CDS 50.0%
CATCCTCCTGGCCAATGGAT+AGG - chr8_2:70067587-70067606 Msa1265630:intron 55.0%
GGGTCTATCTCTCTGCAGGA+TGG - chr8_2:70069278-70069297 Msa1265630:intron 55.0%
AAACGTGGGACCTATAGGGG+TGG - chr8_2:70069796-70069815 Msa1265630:intron 55.0%
TCAGATGAGGAGTGACTGGG+AGG - chr8_2:70069859-70069878 Msa1265630:CDS 55.0%
CATGGCATCCTCCTGGCCAA+TGG - chr8_2:70067582-70067601 Msa1265630:intron 60.0%
GTGCCTATCCATTGGCCAGG+AGG + chr8_2:70067593-70067612 None:intergenic 60.0%
! GATGGCGCCGAGAGTGGTTA+TGG - chr8_2:70069296-70069315 Msa1265630:intron 60.0%
! CTGCAGGATGGCGCCGAGAG+TGG - chr8_2:70069290-70069309 Msa1265630:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 70064213 70070112 70064213 ID=Msa1265630;Name=Msa1265630
chr8_2 mRNA 70064213 70070112 70064213 ID=Msa1265630-mRNA-1;Parent=Msa1265630;Name=Msa1265630-mRNA-1;_AED=0.01;_eAED=0.01;_QI=76|1|1|1|1|1|7|239|414
chr8_2 exon 70064213 70064557 70064213 ID=Msa1265630-mRNA-1:exon:23223;Parent=Msa1265630-mRNA-1
chr8_2 exon 70064968 70065029 70064968 ID=Msa1265630-mRNA-1:exon:23222;Parent=Msa1265630-mRNA-1
chr8_2 exon 70065116 70065208 70065116 ID=Msa1265630-mRNA-1:exon:23221;Parent=Msa1265630-mRNA-1
chr8_2 exon 70066782 70067443 70066782 ID=Msa1265630-mRNA-1:exon:23220;Parent=Msa1265630-mRNA-1
chr8_2 exon 70067604 70067647 70067604 ID=Msa1265630-mRNA-1:exon:23219;Parent=Msa1265630-mRNA-1
chr8_2 exon 70068321 70068385 70068321 ID=Msa1265630-mRNA-1:exon:23218;Parent=Msa1265630-mRNA-1
chr8_2 exon 70069824 70070112 70069824 ID=Msa1265630-mRNA-1:exon:23217;Parent=Msa1265630-mRNA-1
chr8_2 five_prime_UTR 70070037 70070112 70070037 ID=Msa1265630-mRNA-1:five_prime_utr;Parent=Msa1265630-mRNA-1
chr8_2 CDS 70069824 70070036 70069824 ID=Msa1265630-mRNA-1:cds;Parent=Msa1265630-mRNA-1
chr8_2 CDS 70068321 70068385 70068321 ID=Msa1265630-mRNA-1:cds;Parent=Msa1265630-mRNA-1
chr8_2 CDS 70067604 70067647 70067604 ID=Msa1265630-mRNA-1:cds;Parent=Msa1265630-mRNA-1
chr8_2 CDS 70066782 70067443 70066782 ID=Msa1265630-mRNA-1:cds;Parent=Msa1265630-mRNA-1
chr8_2 CDS 70065116 70065208 70065116 ID=Msa1265630-mRNA-1:cds;Parent=Msa1265630-mRNA-1
chr8_2 CDS 70064968 70065029 70064968 ID=Msa1265630-mRNA-1:cds;Parent=Msa1265630-mRNA-1
chr8_2 CDS 70064452 70064557 70064452 ID=Msa1265630-mRNA-1:cds;Parent=Msa1265630-mRNA-1
chr8_2 three_prime_UTR 70064213 70064451 70064213 ID=Msa1265630-mRNA-1:three_prime_utr;Parent=Msa1265630-mRNA-1
Gene Sequence

>Msa1265630

ATGCCTGCAAATCCATCAGGTATCAAAAGAATTCCAACCCTCTTCACTTTCACTCCTCGTCAAGTTTTGTTAAGCAATCGAACCATGAAGAACGGAACCCAAAACTCTGAACAGAAGCAGAAGCTTCTTCTGAACCAATCAATTGCTCTTTACTTGGAACGCTCGGGATTCTCCAAAACCCTCAAAAAGTTTCTCTCTGAAGCTAAAATTGAGAACGATAATACAGAGGGTTCCACAGTGGATCTAGAAGAGATGTGCCGCAAATATTTGGAAACATGTAGCAAGGATGCTAAGTCAACTATCAATGATCAAAAAGCGCAAGGTGTGGACTCCAAAAATGATGAGGAAAAATCCAAGGGAAAAAAGAAAAAGAAAAGCAACGTAGTTTCTGAATCTGTTGTTGATAATGTGGAAGACAACCAATTGGAGTCACCAACTGTGGTTACAGAAAACAAAGTTAAGGATGATTTATCTACAGATGCCAAAGTTGATAATGGTGCTGAGACAGAGAAACGGTCCAAACCCAAAAAGAAAAAGAACAATAAGTCAAATATTGAAGGGGGTGCAATAGAGCAGAATGCAGTTACAGAAAATAAAGTTAAGGATGATTTATCCATAGATGCCAAAGTTGAAAATGGTGCTGAGACAGAGAAGAGGTCCAAACGTAAAATGAAAAAGAAAGATAAGTCAATTAGTGAAGGGGATGCAAAAGAGCAGATTGGAGACCCCGATGCAACAAATGAAGAAGCAACGCCCGAAGAGAAGAAAGATTCTAAAAAAAGAAAGCGACCAATTTCTAAAGAAAATGGTGAACAAGATACCGAAATAAAGGCAGATGAAGAAACCAAACGCAGGAAAATAGAAAATATGAGTGAATCTAAGGGAGGAGACCAATCAGCAAAATCAAACGGGCTTTCTGAGAATGGGGAAGAAAATTCTTCTGTGCAAAAGTCTCAGAAGAAAAAACATAAAGAATCATCTGAGCAAAAACCAGTGAAGGCAGCATTTCAACGCGTACAAGTTGACAAAGTAGAATTTGTTGATGAGAGGCTTCAGGATAACTCATATTGGGCAAAGGATGGCGCCGAGAGTGGTTATGGTGCAAAAGCAGAAGAAATTCTTGGTCAAGTCAGAGGAAGGGATTTTCGCCACGAGAAGACCAAGAAGAAACGTGGGACCTATAGGGGTGGACTTATTGATTTACATTCCCACTCAGTTAAGTTTAATTATTCAGATGAGGAGTGA

Protein sequence

>Msa1265630

MPANPSGIKRIPTLFTFTPRQVLLSNRTMKNGTQNSEQKQKLLLNQSIALYLERSGFSKTLKKFLSEAKIENDNTEGSTVDLEEMCRKYLETCSKDAKSTINDQKAQGVDSKNDEEKSKGKKKKKSNVVSESVVDNVEDNQLESPTVVTENKVKDDLSTDAKVDNGAETEKRSKPKKKKNNKSNIEGGAIEQNAVTENKVKDDLSIDAKVENGAETEKRSKRKMKKKDKSISEGDAKEQIGDPDATNEEATPEEKKDSKKRKRPISKENGEQDTEIKADEETKRRKIENMSESKGGDQSAKSNGLSENGEENSSVQKSQKKKHKESSEQKPVKAAFQRVQVDKVEFVDERLQDNSYWAKDGAESGYGAKAEEILGQVRGRDFRHEKTKKKRGTYRGGLIDLHSHSVKFNYSDEE*