AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1137090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1137090 MtrunA17_Chr7g0259221 98.316 475 8 0 1 475 3 477 0.0 939
Msa1137090 MtrunA17_Chr7g0259471 90.526 475 45 0 1 475 1 475 0.0 873
Msa1137090 MtrunA17_Chr4g0066581 56.790 486 199 3 1 475 3 488 0.0 567
Msa1137090 MtrunA17_Chr2g0286721 55.901 483 205 3 1 475 3 485 0.0 549
Msa1137090 MtrunA17_Chr7g0273281 51.304 460 210 1 30 475 38 497 3.90e-167 481
Msa1137090 MtrunA17_Chr8g0373181 42.623 488 264 4 1 474 1 486 1.03e-138 407
Msa1137090 MtrunA17_Chr1g0155221 46.296 432 226 2 45 470 54 485 2.01e-135 399
Msa1137090 MtrunA17_Chr8g0373191 40.084 474 253 5 9 472 4 456 2.32e-119 357
Msa1137090 MtrunA17_Chr7g0273261 50.000 226 111 1 249 474 15 238 2.16e-79 248
Msa1137090 MtrunA17_Chr5g0404191 39.146 281 158 3 3 272 4 282 1.37e-69 224
Msa1137090 MtrunA17_Chr7g0273271 57.865 178 75 0 42 219 29 206 3.78e-63 204
Msa1137090 MtrunA17_Chr6g0457781 31.674 442 282 8 46 475 111 544 1.52e-61 209
Msa1137090 MtrunA17_Chr4g0039651 31.070 486 291 13 16 471 27 498 1.67e-60 206
Msa1137090 MtrunA17_Chr1g0213631 33.592 387 236 7 100 470 48 429 1.56e-59 202
Msa1137090 MtrunA17_Chr7g0250881 30.543 442 285 8 46 474 71 503 7.23e-59 201
Msa1137090 MtrunA17_Chr4g0021771 29.350 477 299 12 22 470 33 499 1.55e-58 201
Msa1137090 MtrunA17_Chr4g0032021 30.849 483 294 12 24 473 79 554 2.04e-55 193
Msa1137090 MtrunA17_Chr7g0214451 33.419 389 237 8 98 470 94 476 2.15e-54 189
Msa1137090 MtrunA17_Chr1g0213611 32.308 390 240 7 100 470 141 525 4.00e-54 190
Msa1137090 MtrunA17_Chr4g0034681 28.364 483 310 8 22 472 12 490 3.44e-52 184
Msa1137090 MtrunA17_Chr2g0282031 28.601 486 327 6 2 470 15 497 8.92e-52 183
Msa1137090 MtrunA17_Chr3g0144361 30.206 437 267 8 68 470 56 488 1.22e-51 182
Msa1137090 MtrunA17_Chr5g0432581 29.253 482 301 13 21 470 6 479 2.67e-45 165
Msa1137090 MtrunA17_Chr3g0115721 29.208 404 270 6 80 469 82 483 6.30e-45 164
Msa1137090 MtrunA17_Chr6g0485661 27.505 469 313 7 23 465 35 502 5.63e-44 161
Msa1137090 MtrunA17_Chr3g0115711 28.607 402 274 5 80 469 82 482 8.92e-44 160
Msa1137090 MtrunA17_Chr3g0115741 29.412 408 264 9 80 469 85 486 1.64e-43 160
Msa1137090 MtrunA17_Chr4g0036021 28.899 436 275 10 68 472 55 486 9.88e-43 158
Msa1137090 MtrunA17_Chr7g0221631 87.654 81 8 1 360 440 39 117 4.93e-42 145
Msa1137090 MtrunA17_Chr4g0004821 30.835 467 299 11 27 475 14 474 2.04e-41 154
Msa1137090 MtrunA17_Chr3g0115751 28.571 406 270 8 80 469 87 488 3.49e-41 154
Msa1137090 MtrunA17_Chr8g0373531 28.758 459 289 12 44 470 27 479 3.80e-41 154
Msa1137090 MtrunA17_Chr6g0486021 27.846 492 308 11 2 473 22 486 2.25e-40 151
Msa1137090 MtrunA17_Chr3g0115781 28.079 406 274 7 80 470 84 486 2.37e-40 151
Msa1137090 MtrunA17_Chr4g0065324 28.536 403 271 7 80 469 88 486 6.71e-40 150
Msa1137090 MtrunA17_Chr3g0085971 27.764 407 275 8 80 470 82 485 4.26e-39 148
Msa1137090 MtrunA17_Chr8g0390521 28.348 448 281 12 52 471 34 469 3.47e-38 145
Msa1137090 MtrunA17_Chr8g0390141 27.331 472 303 12 34 469 18 485 1.13e-37 144
Msa1137090 MtrunA17_Chr5g0420841 28.676 408 270 9 80 470 82 485 1.37e-37 144
Msa1137090 MtrunA17_Chr3g0078791 26.905 420 273 7 62 469 13 410 3.49e-37 141
Msa1137090 MtrunA17_Chr1g0205671 26.781 407 283 6 80 473 83 487 7.29e-37 142
Msa1137090 MtrunA17_Chr5g0403831 26.697 442 279 11 68 471 59 493 9.88e-37 141
Msa1137090 MtrunA17_Chr1g0164851 27.371 464 302 8 40 470 23 484 2.61e-36 140
Msa1137090 MtrunA17_Chr4g0065311 27.792 403 270 8 82 469 82 478 3.15e-36 140
Msa1137090 MtrunA17_Chr5g0394341 25.799 407 287 5 80 473 83 487 3.31e-36 140
Msa1137090 MtrunA17_Chr1g0164871 27.155 464 303 8 40 470 23 484 3.35e-36 140
Msa1137090 MtrunA17_Chr1g0205681 27.845 413 275 9 78 473 82 488 3.55e-36 140
Msa1137090 MtrunA17_Chr3g0128081 28.079 406 273 7 80 469 83 485 7.87e-36 139
Msa1137090 MtrunA17_Chr1g0205691 26.471 408 283 6 80 473 83 487 7.96e-36 139
Msa1137090 MtrunA17_Chr3g0128171 28.362 409 268 7 80 469 36 438 1.69e-35 137
Msa1137090 MtrunA17_Chr2g0303731 29.942 344 218 8 35 359 22 361 3.63e-35 138
Msa1137090 MtrunA17_Chr2g0303731 41.000 100 56 2 373 470 452 550 2.59e-14 75.5
Msa1137090 MtrunA17_Chr5g0417611 28.117 409 269 8 80 469 84 486 8.79e-35 136
Msa1137090 MtrunA17_Chr3g0121674 31.741 293 171 9 194 469 2 282 1.14e-34 131
Msa1137090 MtrunA17_Chr3g0119401 26.522 460 301 11 38 475 90 534 4.77e-34 134
Msa1137090 MtrunA17_Chr6g0486681 25.118 422 292 9 69 469 67 485 6.21e-34 133
Msa1137090 MtrunA17_Chr6g0486671 25.118 422 292 9 69 469 67 485 6.21e-34 133
Msa1137090 MtrunA17_Chr8g0376601 31.183 279 175 5 102 367 91 365 7.99e-34 134
Msa1137090 MtrunA17_Chr8g0376601 39.130 92 55 1 373 463 450 541 4.66e-13 71.2
Msa1137090 MtrunA17_Chr8g0390261 26.714 423 284 9 69 469 67 485 1.11e-33 133
Msa1137090 MtrunA17_Chr8g0376611 30.970 268 172 4 89 343 11 278 1.63e-33 132
Msa1137090 MtrunA17_Chr8g0376611 36.449 107 59 2 373 474 382 484 2.77e-13 72.0
Msa1137090 MtrunA17_Chr7g0257631 27.000 400 277 7 82 469 122 518 2.72e-32 129
Msa1137090 MtrunA17_Chr4g0048411 27.344 384 256 7 105 470 108 486 3.02e-32 129
Msa1137090 MtrunA17_Chr2g0303701 29.670 273 174 5 100 358 89 357 3.26e-31 126
Msa1137090 MtrunA17_Chr3g0115731 26.842 380 246 6 98 469 107 462 3.35e-31 125
Msa1137090 MtrunA17_Chr5g0437021 26.609 466 303 10 40 470 23 484 9.56e-31 124
Msa1137090 MtrunA17_Chr5g0404181 51.020 98 48 0 373 470 31 128 1.71e-30 115
Msa1137090 MtrunA17_Chr4g0065351 28.923 325 214 6 158 469 1 321 2.00e-30 121
Msa1137090 MtrunA17_Chr4g0048051 28.052 385 250 7 105 469 108 485 2.71e-30 123
Msa1137090 MtrunA17_Chr3g0078971 25.553 407 282 8 80 470 83 484 4.92e-30 122
Msa1137090 MtrunA17_Chr8g0376631 29.572 257 168 4 98 341 87 343 1.10e-29 122
Msa1137090 MtrunA17_Chr8g0376631 38.835 103 54 2 373 470 451 549 2.66e-14 75.1
Msa1137090 MtrunA17_Chr5g0445601 26.000 400 281 7 82 469 88 484 1.14e-29 121
Msa1137090 MtrunA17_Chr3g0078991 27.479 353 238 8 133 470 136 485 1.29e-29 121
Msa1137090 MtrunA17_Chr7g0259451 92.000 50 4 0 389 438 1 50 1.25e-26 101
Msa1137090 MtrunA17_Chr2g0290181 30.070 286 178 7 98 364 88 370 2.52e-26 112
Msa1137090 MtrunA17_Chr2g0290181 35.354 99 63 1 373 470 455 553 8.45e-13 70.5
Msa1137090 MtrunA17_Chr1g0173341 94.545 55 3 0 307 361 67 121 3.48e-26 102
Msa1137090 MtrunA17_Chr3g0144261 37.297 185 108 3 68 245 32 215 1.05e-25 110
Msa1137090 MtrunA17_Chr3g0144261 31.250 208 126 3 274 467 507 711 3.81e-19 90.5
Msa1137090 MtrunA17_Chr2g0290161 28.289 304 169 8 98 384 21 292 6.44e-22 98.6
Msa1137090 MtrunA17_Chr5g0419321 29.528 254 153 6 237 467 479 729 4.99e-20 93.6
Msa1137090 MtrunA17_Chr5g0419321 30.151 199 129 4 54 245 50 245 5.67e-18 87.0
Msa1137090 MtrunA17_Chr3g0146061 30.088 226 140 4 257 467 499 721 6.19e-20 93.2
Msa1137090 MtrunA17_Chr3g0146061 33.889 180 108 5 68 237 32 210 4.90e-16 80.9
Msa1137090 MtrunA17_Chr5g0407441 29.741 232 145 5 251 467 475 703 3.13e-18 87.8
Msa1137090 MtrunA17_Chr5g0407441 31.383 188 117 5 68 245 32 217 2.55e-17 85.1
Msa1137090 MtrunA17_Chr8g0370151 29.327 208 130 4 274 467 138 342 1.67e-17 84.0
Msa1137090 MtrunA17_Chr5g0434261 25.083 303 182 8 200 463 7 303 2.77e-17 82.8
Msa1137090 MtrunA17_Chr5g0434231 30.058 173 94 3 84 256 9 154 3.17e-15 73.2
Msa1137090 MtrunA17_Chr8g0370141 29.630 189 119 7 68 245 32 217 2.43e-14 74.7
Msa1137090 MtrunA17_Chr5g0434251 35.514 107 60 2 373 474 38 140 4.76e-13 67.0
Msa1137090 MtrunA17_Chr2g0319001 25.248 404 245 18 89 461 133 510 6.48e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1137090 AT2G48020.2 71.058 463 129 1 12 474 5 462 0.0 686
Msa1137090 AT2G48020.1 71.058 463 129 1 12 474 5 462 0.0 686
Msa1137090 AT5G18840.1 56.757 481 199 4 1 474 1 479 0.0 550
Msa1137090 AT3G05150.1 55.650 469 201 3 4 471 5 467 0.0 530
Msa1137090 AT3G05150.3 55.650 469 201 3 4 471 5 467 0.0 530
Msa1137090 AT3G05150.2 55.414 471 203 3 4 473 5 469 0.0 530
Msa1137090 AT2G48020.4 69.106 369 109 1 12 380 5 368 0.0 526
Msa1137090 AT1G54730.2 54.079 429 197 0 45 473 37 465 1.79e-169 486
Msa1137090 AT2G48020.3 69.670 333 96 1 15 347 8 335 1.18e-168 479
Msa1137090 AT1G54730.3 55.330 394 176 0 45 438 37 430 4.90e-157 452
Msa1137090 AT1G54730.5 51.748 429 186 1 45 473 37 444 2.65e-156 451
Msa1137090 AT1G08920.1 45.043 464 252 1 11 474 6 466 1.59e-146 427
Msa1137090 AT1G08920.2 44.374 471 252 2 11 474 6 473 7.02e-144 421
Msa1137090 AT3G05165.3 44.181 464 254 1 11 474 6 464 1.27e-143 420
Msa1137090 AT3G05165.2 44.181 464 254 1 11 474 6 464 1.27e-143 420
Msa1137090 AT3G05165.1 44.181 464 254 1 11 474 6 464 1.27e-143 420
Msa1137090 AT1G54730.4 52.792 394 165 1 45 438 37 409 1.28e-143 418
Msa1137090 AT1G08930.1 46.667 435 232 0 40 474 58 492 5.31e-142 417
Msa1137090 AT1G08930.2 46.667 435 232 0 40 474 58 492 5.31e-142 417
Msa1137090 AT3G05160.1 44.348 460 251 1 15 474 1 455 8.51e-142 415
Msa1137090 AT3G20460.1 44.304 474 253 2 1 474 25 487 1.93e-141 415
Msa1137090 AT3G05155.1 44.493 454 248 2 22 474 9 459 1.81e-138 406
Msa1137090 AT1G19450.1 43.265 490 254 5 1 471 1 485 3.54e-137 404
Msa1137090 AT1G54730.9 54.167 360 165 0 45 404 37 396 1.45e-136 400
Msa1137090 AT1G54730.7 54.167 360 165 0 45 404 37 396 1.45e-136 400
Msa1137090 AT1G75220.1 43.299 485 260 5 1 471 1 484 1.33e-134 397
Msa1137090 AT3G05400.1 45.934 455 240 3 21 470 3 456 5.66e-134 395
Msa1137090 AT5G27350.1 43.601 461 257 1 13 473 7 464 9.20e-134 395
Msa1137090 AT1G08920.3 45.093 428 232 1 11 438 6 430 1.04e-133 394
Msa1137090 AT4G04750.1 43.488 453 252 2 22 472 20 470 4.99e-133 393
Msa1137090 AT4G04750.2 43.488 453 252 2 22 472 20 470 4.99e-133 393
Msa1137090 AT5G27360.1 43.696 460 257 1 16 473 9 468 6.14e-133 393
Msa1137090 AT4G04750.3 43.392 454 253 2 21 472 63 514 1.64e-132 394
Msa1137090 AT5G27360.3 43.696 460 257 1 16 473 57 516 4.58e-132 392
Msa1137090 AT4G04760.1 45.103 439 236 2 36 471 29 465 2.77e-131 389
Msa1137090 AT3G05160.3 46.173 405 218 0 70 474 2 406 2.17e-130 384
Msa1137090 AT3G05160.2 46.173 405 218 0 70 474 2 406 2.17e-130 384
Msa1137090 AT3G05165.6 43.418 433 240 1 11 443 6 433 4.85e-129 384
Msa1137090 AT1G54730.8 51.389 360 154 1 45 404 37 375 2.52e-123 365
Msa1137090 AT3G05400.2 44.176 455 228 4 21 470 3 436 5.35e-123 366
Msa1137090 AT4G04760.3 45.679 405 217 1 70 471 2 406 3.11e-122 363
Msa1137090 AT3G05165.4 42.721 419 235 1 11 429 6 419 2.55e-120 360
Msa1137090 AT3G05165.5 42.721 419 235 1 11 429 6 419 2.55e-120 360
Msa1137090 AT1G08890.1 39.434 459 274 1 15 473 6 460 1.20e-118 356
Msa1137090 AT1G08900.1 41.299 431 253 0 43 473 28 458 9.99e-118 353
Msa1137090 AT1G08900.2 41.299 431 253 0 43 473 28 458 9.99e-118 353
Msa1137090 AT1G54730.11 56.711 298 129 0 45 342 37 334 4.98e-117 347
Msa1137090 AT4G04760.2 43.619 431 233 3 46 471 37 462 5.37e-117 352
Msa1137090 AT1G08900.5 41.787 414 241 0 60 473 3 416 2.36e-114 343
Msa1137090 AT1G08900.3 40.603 431 248 2 43 473 28 450 3.10e-111 337
Msa1137090 AT1G54730.10 56.679 277 120 0 45 321 37 313 9.57e-108 323
Msa1137090 AT1G54730.6 56.679 277 120 0 45 321 37 313 9.57e-108 323
Msa1137090 AT5G27360.2 43.956 364 204 0 110 473 1 364 1.78e-107 324
Msa1137090 AT5G27360.5 43.956 364 204 0 110 473 1 364 1.78e-107 324
Msa1137090 AT1G08900.4 41.667 396 231 0 43 438 28 423 3.67e-105 320
Msa1137090 AT5G27360.4 41.207 381 222 1 16 394 9 389 8.04e-98 301
Msa1137090 AT3G05155.2 43.925 321 177 1 22 342 9 326 1.10e-91 282
Msa1137090 AT5G17010.1 32.305 486 285 14 16 471 29 500 2.88e-59 203
Msa1137090 AT5G17010.3 32.305 486 285 14 16 471 29 500 2.88e-59 203
Msa1137090 AT5G17010.4 32.305 486 285 14 16 471 29 500 2.88e-59 203
Msa1137090 AT5G16150.2 30.700 443 285 8 46 475 111 544 3.70e-59 204
Msa1137090 AT5G16150.1 30.700 443 285 8 46 475 111 544 3.70e-59 204
Msa1137090 AT5G16150.3 30.700 443 285 8 46 475 111 544 3.70e-59 204
Msa1137090 AT3G03090.1 31.568 491 302 13 6 471 19 500 3.34e-58 200
Msa1137090 AT5G59250.1 32.117 411 247 10 88 473 153 556 4.44e-55 193
Msa1137090 AT2G43330.1 33.505 388 236 9 100 470 94 476 9.44e-55 191
Msa1137090 AT2G20780.1 27.917 480 323 10 10 470 22 497 8.12e-49 175
Msa1137090 AT2G20780.2 29.257 417 277 8 69 470 26 439 1.63e-47 171
Msa1137090 AT2G16120.1 28.132 455 281 12 52 470 42 486 1.01e-45 167
Msa1137090 AT1G67300.1 30.283 459 269 11 45 475 56 491 4.06e-45 164
Msa1137090 AT1G67300.3 30.283 459 269 11 45 475 56 491 4.06e-45 164
Msa1137090 AT1G67300.2 30.217 460 269 11 45 475 56 492 5.06e-45 164
Msa1137090 AT1G05030.2 29.877 405 261 7 84 475 73 467 4.42e-44 161
Msa1137090 AT1G05030.1 29.877 405 261 7 84 475 125 519 8.84e-44 162
Msa1137090 AT2G16130.1 27.727 440 276 11 68 471 54 487 1.60e-43 160
Msa1137090 AT1G79820.2 29.718 461 291 10 32 473 44 490 9.26e-43 158
Msa1137090 AT1G79820.1 29.718 461 291 10 32 473 44 490 9.26e-43 158
Msa1137090 AT1G67300.6 31.783 387 242 8 45 418 56 433 2.78e-42 156
Msa1137090 AT1G67300.7 31.783 387 242 8 45 418 56 433 2.78e-42 156
Msa1137090 AT3G18830.1 26.498 434 286 9 68 470 64 495 3.27e-42 157
Msa1137090 AT4G36670.1 28.070 456 281 9 54 471 31 477 4.79e-42 156
Msa1137090 AT2G18480.1 27.333 450 289 8 54 470 36 480 9.02e-42 155
Msa1137090 AT1G67300.4 32.011 378 235 8 45 409 56 424 6.80e-41 152
Msa1137090 AT1G67300.5 32.011 378 235 8 45 409 56 424 6.80e-41 152
Msa1137090 AT1G79820.4 30.769 403 251 8 32 418 44 434 4.07e-39 147
Msa1137090 AT1G50310.1 27.295 403 279 5 80 469 85 486 1.43e-37 144
Msa1137090 AT5G26340.1 26.044 407 286 5 80 473 84 488 2.61e-36 141
Msa1137090 AT3G19940.1 26.799 403 280 6 80 469 85 485 4.60e-36 140
Msa1137090 AT1G11260.1 26.988 415 266 8 80 469 83 485 2.55e-35 138
Msa1137090 AT4G21480.1 28.954 411 263 9 80 470 83 484 4.63e-35 137
Msa1137090 AT3G19930.1 27.123 424 289 6 61 470 67 484 7.52e-35 136
Msa1137090 AT3G19930.2 27.123 424 289 6 61 470 67 484 7.52e-35 136
Msa1137090 AT5G17010.2 26.899 487 250 14 16 471 26 437 1.38e-34 134
Msa1137090 AT5G23270.1 27.228 404 278 6 80 469 85 486 4.27e-34 134
Msa1137090 AT4G02050.2 26.980 404 272 10 82 469 88 484 7.29e-34 134
Msa1137090 AT4G02050.1 26.980 404 272 10 82 469 88 484 7.29e-34 134
Msa1137090 AT1G07340.1 29.584 409 260 10 80 469 82 481 9.18e-34 133
Msa1137090 AT3G05960.1 28.266 421 257 10 80 473 80 482 1.86e-33 132
Msa1137090 AT5G26250.1 27.873 409 274 9 80 473 81 483 4.92e-33 131
Msa1137090 AT1G50310.2 27.190 331 227 5 152 469 14 343 2.52e-32 127
Msa1137090 AT1G30220.1 29.930 284 183 7 102 370 93 375 5.96e-32 129
Msa1137090 AT1G30220.1 36.449 107 59 2 373 474 455 557 2.12e-14 75.9
Msa1137090 AT1G34580.2 27.792 403 276 7 82 469 35 437 4.59e-31 125
Msa1137090 AT1G34580.1 27.792 403 276 7 82 469 85 487 8.09e-31 125
Msa1137090 AT1G77210.2 25.768 423 288 8 69 469 67 485 1.20e-30 124
Msa1137090 AT1G77210.1 25.768 423 288 8 69 469 67 485 1.20e-30 124
Msa1137090 AT2G35740.1 26.159 302 185 5 84 358 73 363 1.10e-26 113
Msa1137090 AT2G35740.1 41.414 99 57 1 373 470 458 556 6.04e-15 77.8
Msa1137090 AT4G16480.2 26.715 277 183 5 100 358 90 364 1.17e-25 110
Msa1137090 AT4G16480.2 37.374 99 61 1 373 470 459 557 4.06e-14 75.1
Msa1137090 AT4G16480.3 26.715 277 183 5 100 358 90 364 1.17e-25 110
Msa1137090 AT4G16480.3 37.374 99 61 1 373 470 459 557 4.06e-14 75.1
Msa1137090 AT4G16480.1 26.715 277 183 5 100 358 90 364 1.17e-25 110
Msa1137090 AT4G16480.1 37.374 99 61 1 373 470 459 557 4.06e-14 75.1
Msa1137090 AT1G79820.3 26.464 461 258 11 32 473 44 442 1.12e-24 106
Msa1137090 AT5G61520.2 25.874 429 287 11 65 469 18 439 1.02e-23 103
Msa1137090 AT5G61520.1 25.874 429 287 11 65 469 66 487 1.30e-23 103
Msa1137090 AT1G20840.2 34.595 185 113 3 68 245 32 215 2.31e-23 103
Msa1137090 AT1G20840.2 31.250 208 126 3 274 467 509 713 3.61e-18 88.2
Msa1137090 AT1G20840.1 34.595 185 113 3 68 245 32 215 2.31e-23 103
Msa1137090 AT1G20840.1 31.250 208 126 3 274 467 509 713 3.61e-18 88.2
Msa1137090 AT1G77210.3 25.904 332 230 7 151 469 8 336 2.48e-23 101
Msa1137090 AT3G51490.1 36.585 164 96 4 89 245 55 217 6.79e-21 96.7
Msa1137090 AT3G51490.1 29.134 254 154 6 224 467 469 706 4.94e-17 84.3
Msa1137090 AT3G51490.3 36.585 164 96 4 89 245 5 167 6.92e-21 96.3
Msa1137090 AT3G51490.3 28.185 259 158 6 224 467 419 664 4.78e-19 90.9
Msa1137090 AT3G51490.2 36.585 164 96 4 89 245 55 217 7.30e-21 96.3
Msa1137090 AT3G51490.2 28.185 259 158 6 224 467 469 714 5.25e-19 90.5
Msa1137090 AT4G35300.5 31.019 216 132 5 266 467 311 523 6.59e-19 90.1
Msa1137090 AT4G35300.9 31.019 216 132 5 266 467 498 710 9.98e-19 89.7
Msa1137090 AT4G35300.9 36.170 188 108 6 68 245 32 217 1.21e-18 89.7
Msa1137090 AT4G35300.2 31.019 216 132 5 266 467 498 710 9.98e-19 89.7
Msa1137090 AT4G35300.2 36.170 188 108 6 68 245 32 217 1.21e-18 89.7
Msa1137090 AT4G35300.3 31.019 216 132 5 266 467 498 710 9.98e-19 89.7
Msa1137090 AT4G35300.3 36.170 188 108 6 68 245 32 217 1.21e-18 89.7
Msa1137090 AT4G35300.4 31.019 216 132 5 266 467 508 720 1.24e-18 89.4
Msa1137090 AT4G35300.4 36.170 188 108 6 68 245 32 217 1.47e-18 89.4
Msa1137090 AT4G35300.8 31.019 216 132 5 266 467 508 720 1.24e-18 89.4
Msa1137090 AT4G35300.8 36.170 188 108 6 68 245 32 217 1.47e-18 89.4
Msa1137090 AT4G35300.6 31.019 216 132 5 266 467 508 720 1.24e-18 89.4
Msa1137090 AT4G35300.6 36.170 188 108 6 68 245 32 217 1.47e-18 89.4
Msa1137090 AT4G35300.11 31.019 216 132 5 266 467 508 720 1.24e-18 89.4
Msa1137090 AT4G35300.11 36.170 188 108 6 68 245 32 217 1.47e-18 89.4
Msa1137090 AT4G35300.1 31.019 216 132 5 266 467 508 720 1.24e-18 89.4
Msa1137090 AT4G35300.1 36.170 188 108 6 68 245 32 217 1.47e-18 89.4
Msa1137090 AT4G35300.10 31.019 216 132 5 266 467 508 720 1.24e-18 89.4
Msa1137090 AT4G35300.10 36.170 188 108 6 68 245 32 217 1.47e-18 89.4
Msa1137090 AT4G35300.7 31.019 216 132 5 266 467 508 720 1.24e-18 89.4
Msa1137090 AT4G35300.7 36.170 188 108 6 68 245 32 217 1.47e-18 89.4
Msa1137090 AT1G54730.1 59.677 62 25 0 91 152 1 62 1.73e-17 77.0

Find 145 sgRNAs with CRISPR-Local

Find 275 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCACTGCTGTGTTGCTTC+TGG 0.130660 7_4:-5776975 Msa1137090:CDS
CTTATGGTTTGCCAGCAATT+AGG 0.210158 7_4:-5776310 Msa1137090:CDS
GATATTTCCAGTCAATATTA+AGG 0.214954 7_4:-5775126 Msa1137090:CDS
CTTGGTTTCGATTAGGTATC+TGG 0.222577 7_4:-5775779 Msa1137090:intron
GCAAACTTCCTATGCGTTAA+TGG 0.222951 7_4:+5774763 None:intergenic
GTTTGTGGTTCTTATGAATT+TGG 0.236732 7_4:-5778386 Msa1137090:CDS
TTATGGTTTGCCAGCAATTA+GGG 0.246534 7_4:-5776309 Msa1137090:CDS
GTTAAGGCATTATACTATTA+AGG 0.260116 7_4:+5774547 None:intergenic
AGGGCACCTCGGAGTTCTTT+TGG 0.268637 7_4:+5777331 None:intergenic
GGTCCAGTGCCTTTGGATAT+TGG 0.272502 7_4:-5777516 Msa1137090:CDS
GTGTAGTGTTTGGTGGAAAT+TGG 0.274589 7_4:-5774735 Msa1137090:three_prime_UTR
CCCACTGCTGTGTTGCTTCT+GGG 0.289747 7_4:-5776974 Msa1137090:CDS
GTCCAGTGCCTTTGGATATT+GGG 0.296992 7_4:-5777515 Msa1137090:CDS
CCACTTTGGTCCTTTACATT+AGG 0.299777 7_4:+5774510 None:intergenic
GCAACACAGCAGTGGGAATA+AGG 0.301338 7_4:+5776981 None:intergenic
GTATCAGTGTCATTCATAAT+TGG 0.311203 7_4:-5777163 Msa1137090:CDS
TAAAAGCCTTGAACAATTAC+AGG 0.318980 7_4:-5774789 Msa1137090:CDS
TTTGGCTCCATCTTGACATT+TGG 0.325417 7_4:-5777856 Msa1137090:CDS
TTTATAGGGTCCAGTGCCTT+TGG 0.327122 7_4:-5777523 Msa1137090:intron
TTACCAAAAGTAGGGGCTTC+CGG 0.327819 7_4:+5775878 None:intergenic
GAAGGATCTTAGTCTGTCTT+TGG 0.336829 7_4:-5778150 Msa1137090:CDS
CTCCAACTCAAGAAGCTATT+AGG 0.337233 7_4:-5778172 Msa1137090:CDS
AGGCCGGAAGCCCCTACTTT+TGG 0.343569 7_4:-5775881 Msa1137090:intron
GTCCCAGCACTTGCCGTAAT+CGG 0.344026 7_4:-5775597 Msa1137090:CDS
ACCACATTCATTGCAGTTTG+TGG 0.345828 7_4:-5778401 Msa1137090:CDS
CCCCTTTCTTCCAACGAAAT+CGG 0.361829 7_4:+5777798 None:intergenic
TAATTGGAACAGTACTTTCA+TGG 0.363139 7_4:-5777147 Msa1137090:CDS
GGAATAAGAGAACCATTGAT+AGG 0.364113 7_4:-5778488 Msa1137090:CDS
GTAGATTGGAGTAGGGCTTA+TGG 0.368425 7_4:-5776326 Msa1137090:intron
GGGAGACTAGCAACAGGATA+TGG 0.368465 7_4:-5777495 Msa1137090:CDS
TGAAGAGGCAGAAGAAATTC+AGG 0.379612 7_4:-5776744 Msa1137090:intron
GCCGATTTCGTTGGAAGAAA+GGG 0.384009 7_4:-5777799 Msa1137090:CDS
ACTTGCCGTAATCGGCATAT+TGG 0.388619 7_4:-5775589 Msa1137090:intron
TGGCTGCCTGTAATTGTTCA+AGG 0.392084 7_4:+5774783 None:intergenic
TTCGATTAGGTATCTGGATC+AGG 0.394903 7_4:-5775773 Msa1137090:intron
TATAATATACGCTATCCTTC+AGG 0.395137 7_4:-5776034 Msa1137090:intron
CTTCCAACGAAATCGGCAAT+AGG 0.397086 7_4:+5777805 None:intergenic
ATACCTGATTTAAGGTAGTC+AGG 0.404425 7_4:+5777311 None:intergenic
CTCATGAGTTGGAGCTCCTA+TGG 0.410624 7_4:-5775032 Msa1137090:intron
TAAATGCAGTACTCCTTGTT+TGG 0.414418 7_4:-5777874 Msa1137090:intron
TTATTACTTACCAGCCATCT+AGG 0.415487 7_4:+5776929 None:intergenic
TTCCTAATAGCTTCTTGAGT+TGG 0.419270 7_4:+5778170 None:intergenic
TGGAGGGCTTTAGCTATAAT+CGG 0.425528 7_4:-5777127 Msa1137090:intron
CCATACCAATATGCCGATTA+CGG 0.426709 7_4:+5775584 None:intergenic
TGCCCTGACTACCTTAAATC+AGG 0.427867 7_4:-5777314 Msa1137090:intron
GGATGAATGTATTAGAGTTA+AGG 0.432104 7_4:+5774531 None:intergenic
TGAAACAAATCCAGCACCTT+CGG 0.432421 7_4:+5776571 None:intergenic
TCATTCCAGAGTCTCCTAGA+TGG 0.435503 7_4:-5776943 Msa1137090:CDS
CTTTCAACTTTCTCATGAGT+TGG 0.435734 7_4:-5775043 Msa1137090:CDS
CTTTAAATTTACCAAAAGTA+GGG 0.436278 7_4:+5775870 None:intergenic
TCTGGATCAGGATTGGTTGC+AGG 0.437259 7_4:-5775761 Msa1137090:CDS
GCATAGCAACATTAGTGAAC+TGG 0.437404 7_4:-5775091 Msa1137090:CDS
TGCCGATTTCGTTGGAAGAA+AGG 0.437883 7_4:-5777800 Msa1137090:CDS
ATGCCGATTACGGCAAGTGC+TGG 0.438063 7_4:+5775594 None:intergenic
CTTCATGAGTAGATTGGAGT+AGG 0.442194 7_4:-5776334 Msa1137090:intron
GATTGTGACTGTGTCTGTAT+AGG 0.442312 7_4:+5778607 None:intergenic
ATATTTCCAGTCAATATTAA+GGG 0.442648 7_4:-5775125 Msa1137090:CDS
GTCAATATTAAGGGGCAGGC+AGG 0.454849 7_4:-5775116 Msa1137090:CDS
GCTTTAAATTTACCAAAAGT+AGG 0.457971 7_4:+5775869 None:intergenic
ACAAATTATAATCAAAATCA+TGG 0.458705 7_4:+5774617 None:intergenic
ATAGGATTTCCTTCTGCGAC+GGG 0.459192 7_4:-5776060 Msa1137090:intron
GCAACATTAGTGAACTGGTT+TGG 0.459624 7_4:-5775086 Msa1137090:CDS
TTGACATTTGGTGCGATGAT+TGG 0.460714 7_4:-5777844 Msa1137090:CDS
TCCGGCCTGCTCTATCTATG+AGG 0.461836 7_4:+5775896 None:intergenic
CATGAGAAAGTTGAAAGTAT+AGG 0.464787 7_4:+5775049 None:intergenic
TTTGCGATTTGTGTAGTGTT+TGG 0.466010 7_4:-5774745 Msa1137090:three_prime_UTR
TGTGTACAATCTTAGTTCCT+TGG 0.467400 7_4:+5778568 None:intergenic
TCCAGTCAATATTAAGGGGC+AGG 0.473585 7_4:-5775120 Msa1137090:CDS
GCTCGCAAAACCGAAGGTGC+TGG 0.477284 7_4:-5776581 Msa1137090:CDS
CTAGCAACAGGATATGGAAT+GGG 0.490163 7_4:-5777489 Msa1137090:CDS
GAATAAGAGAACCATTGATA+GGG 0.493005 7_4:-5778487 Msa1137090:CDS
GCCTGCCCCTTAATATTGAC+TGG 0.493013 7_4:+5775119 None:intergenic
GATGGATATCAAAGAGGATG+TGG 0.494729 7_4:-5778528 Msa1137090:CDS
GCGATTTGTGTAGTGTTTGG+TGG 0.502161 7_4:-5774742 Msa1137090:three_prime_UTR
ATACATTCATCCTAATGTAA+AGG 0.510639 7_4:-5774520 None:intergenic
GATATTGGGAGACTAGCAAC+AGG 0.513165 7_4:-5777501 Msa1137090:CDS
ACACAGGTTAAGAGTGAAGA+TGG 0.518102 7_4:-5778546 Msa1137090:exon
ACAGGTTCATGAAGTGGCTG+TGG 0.519075 7_4:-5775625 Msa1137090:intron
TCCAGAGTCTCCTAGATGGC+TGG 0.523060 7_4:-5776939 Msa1137090:intron
CAGATTGTGATCACAGGTGT+TGG 0.523824 7_4:-5775925 Msa1137090:CDS
TTAGGTATCTGGATCAGGAT+TGG 0.526007 7_4:-5775768 Msa1137090:intron
TGCCGATTACGGCAAGTGCT+GGG 0.527544 7_4:+5775595 None:intergenic
TCTTAGTCTGTCTTTGGCAG+AGG 0.528107 7_4:-5778144 Msa1137090:intron
TAGGAATGGGAGCAATTCCA+TGG 0.529632 7_4:-5775449 Msa1137090:CDS
TGGAACAGTACTTTCATGGA+GGG 0.532101 7_4:-5777143 Msa1137090:CDS
GGACCTATTGCCGATTTCGT+TGG 0.533309 7_4:-5777808 Msa1137090:CDS
TTCATGAGTAGATTGGAGTA+GGG 0.538540 7_4:-5776333 Msa1137090:intron
ACCAGCCATCTAGGAGACTC+TGG 0.543206 7_4:+5776938 None:intergenic
CATAGGATTTCCTTCTGCGA+CGG 0.543429 7_4:-5776061 Msa1137090:intron
CTCCCAATATCCAAAGGCAC+TGG 0.543712 7_4:+5777513 None:intergenic
GATGATGATCTTTGCTTGCA+TGG 0.548086 7_4:+5778444 None:intergenic
CCGGCCTGCTCTATCTATGA+GGG 0.555047 7_4:+5775897 None:intergenic
TAGTGAACTGGTTTGGTGCA+TGG 0.558886 7_4:-5775079 Msa1137090:CDS
ACCTCGGACATCACAACCCA+TGG 0.560460 7_4:+5775432 None:intergenic
GCAAAGATCATCATCATCCA+TGG 0.563043 7_4:-5778436 Msa1137090:CDS
TACCTGATTTAAGGTAGTCA+GGG 0.563340 7_4:+5777312 None:intergenic
TTTAAATTTACCAAAAGTAG+GGG 0.564761 7_4:+5775871 None:intergenic
ATTATACTCCCCGTCGCAGA+AGG 0.566503 7_4:+5776051 None:intergenic
GTGGAAGGTGGCAATCAGAA+AGG 0.573070 7_4:-5778509 Msa1137090:CDS
AGCAGTTGCATTCTATCTCA+AGG 0.573615 7_4:-5775726 Msa1137090:intron
AGATGCTGATATATCTGAAG+AGG 0.576120 7_4:-5776759 Msa1137090:CDS
ACCCAGAAGCAACACAGCAG+TGG 0.576369 7_4:+5776973 None:intergenic
CCCAGAAGCAACACAGCAGT+GGG 0.578353 7_4:+5776974 None:intergenic
CCGATTTCGTTGGAAGAAAG+GGG 0.579659 7_4:-5777798 Msa1137090:CDS
CATCGCACCAAATGTCAAGA+TGG 0.580805 7_4:+5777849 None:intergenic
GCAATTTCTGCTACGAACAC+AGG 0.587269 7_4:+5777355 None:intergenic
TATTTCCAGTCAATATTAAG+GGG 0.587860 7_4:-5775124 Msa1137090:CDS
GCAGCCCTCATAGATAGAGC+AGG 0.590573 7_4:-5775901 Msa1137090:CDS
AACTCAAGAAGCTATTAGGA+AGG 0.591182 7_4:-5778168 Msa1137090:CDS
GTGGTGAAGTAAACCATCCA+TGG 0.596687 7_4:+5778419 None:intergenic
CAGGTTCATGAAGTGGCTGT+GGG 0.601363 7_4:-5775624 Msa1137090:CDS
AGTGAAGATGGATATCAAAG+AGG 0.602887 7_4:-5778534 Msa1137090:exon
ACTAGCAACAGGATATGGAA+TGG 0.604090 7_4:-5777490 Msa1137090:CDS
GGTGGAAATTGGAACAACAA+AGG 0.604202 7_4:-5774724 Msa1137090:three_prime_UTR
ATGGTTTGCCAGCAATTAGG+GGG 0.608563 7_4:-5776307 Msa1137090:CDS
AGATCATCATCATCCATGGA+TGG 0.612235 7_4:-5778432 Msa1137090:CDS
TGCTGATATTAGGTCTACAT+AGG 0.612667 7_4:-5775483 Msa1137090:intron
ACAGGCAGCCATTAACGCAT+AGG 0.614514 7_4:-5774771 Msa1137090:exon
CGATTTCGTTGGAAGAAAGG+GGG 0.616666 7_4:-5777797 Msa1137090:intron
TAGCAACAGGATATGGAATG+GGG 0.617086 7_4:-5777488 Msa1137090:CDS
AATAAGAGAACCATTGATAG+GGG 0.617887 7_4:-5778486 Msa1137090:CDS
CCCTCATAGATAGAGCAGGC+CGG 0.622479 7_4:-5775897 Msa1137090:CDS
TAATGAATGCAGGCAAAGCG+AGG 0.623838 7_4:-5776827 Msa1137090:intron
ATCAAAGAGGATGTGGAAGG+TGG 0.623969 7_4:-5778521 Msa1137090:CDS
AAGATATTTACGCTCACTCA+CGG 0.630277 7_4:-5776545 Msa1137090:intron
TGTCAAGATGGAGCCAAACA+AGG 0.632848 7_4:+5777861 None:intergenic
TATGGTTTGCCAGCAATTAG+GGG 0.634878 7_4:-5776308 Msa1137090:CDS
AGAACAGCTCGCAAAACCGA+AGG 0.635960 7_4:-5776587 Msa1137090:CDS
AACTAAGATTGTACACACAC+AGG 0.638448 7_4:-5778562 Msa1137090:five_prime_UTR
CGAGTAACAGGTTCATGAAG+TGG 0.639674 7_4:-5775631 Msa1137090:intron
GCAGCATTACAAATACTTCG+CGG 0.650248 7_4:-5776785 Msa1137090:CDS
GCTAGTCTCCCAATATCCAA+AGG 0.651923 7_4:+5777507 None:intergenic
GATATCAAAGAGGATGTGGA+AGG 0.653697 7_4:-5778524 Msa1137090:CDS
GTAGTAGTCCCAGAAACCAA+AGG 0.657750 7_4:-5774812 Msa1137090:CDS
TTGGAACAGTACTTTCATGG+AGG 0.660408 7_4:-5777144 Msa1137090:CDS
TAGGATTTCCTTCTGCGACG+GGG 0.661364 7_4:-5776059 Msa1137090:CDS
TTAAGGTAGTCAGGGCACCT+CGG 0.669152 7_4:+5777320 None:intergenic
CATAGTCATCAATACTACCA+AGG 0.669569 7_4:-5778585 Msa1137090:five_prime_UTR
ATGATTGGTGCAATAACAAG+TGG 0.674569 7_4:-5777829 Msa1137090:CDS
AGGAATGGGAGCAATTCCAT+GGG 0.675398 7_4:-5775448 Msa1137090:CDS
ACCACAAACTGCAATGAATG+TGG 0.678039 7_4:+5778400 None:intergenic
AGCAACAGGATATGGAATGG+GGG 0.687431 7_4:-5777487 Msa1137090:CDS
GATTGCAGCGTAAAGAACGA+AGG 0.710685 7_4:+5774862 None:intergenic
TCCATGGGTTGTGATGTCCG+AGG 0.731376 7_4:-5775433 Msa1137090:intron
ATTGCGCCAAAAGAACTCCG+AGG 0.763517 7_4:-5777337 Msa1137090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAGATAATTAACAATT+TGG + chr7_4:5775440-5775459 None:intergenic 10.0%
!!! ATCAATTTTACATAAATATT+AGG + chr7_4:5777510-5777529 None:intergenic 10.0%
!!! ATTTTGATTATAATTTGTAT+TGG - chr7_4:5778558-5778577 Msa1137090:five_prime_UTR 10.0%
!! TGTTAATTATCTTTATTATG+TGG - chr7_4:5775443-5775462 Msa1137090:CDS 15.0%
!! GTTAATTATCTTTATTATGT+GGG - chr7_4:5775444-5775463 Msa1137090:CDS 15.0%
!! TTAATTATCTTTATTATGTG+GGG - chr7_4:5775445-5775464 Msa1137090:CDS 15.0%
!! AAAAAAGTTCAGATATTATT+TGG + chr7_4:5775620-5775639 None:intergenic 15.0%
!!! TTTATTTTGTTTTGGTTTAT+TGG - chr7_4:5777075-5777094 Msa1137090:intron 15.0%
!! TTAAATTAACCAATAATTCT+TGG - chr7_4:5777168-5777187 Msa1137090:CDS 15.0%
!! TGATTATCATATAATAATTC+TGG + chr7_4:5778222-5778241 None:intergenic 15.0%
!!! TACTTTTATTTATGATTTTC+AGG - chr7_4:5778283-5778302 Msa1137090:intron 15.0%
!! ACAAATTATAATCAAAATCA+TGG + chr7_4:5778556-5778575 None:intergenic 15.0%
!!! TGTTGTTATTTTGTTTTTTC+AGG - chr7_4:5774963-5774982 Msa1137090:intron 20.0%
!!! TTTTCATTAATCTAATCCTA+AGG + chr7_4:5775092-5775111 None:intergenic 20.0%
!! GATTAGATTAATGAAAACAT+AGG - chr7_4:5775095-5775114 Msa1137090:CDS 20.0%
!!! GAAAATGATGTTAGATATTT+TGG - chr7_4:5775405-5775424 Msa1137090:intron 20.0%
!!! TATCCATAAAAAGTTTGTTT+TGG - chr7_4:5775468-5775487 Msa1137090:CDS 20.0%
!!! ATTCCAAAACAAACTTTTTA+TGG + chr7_4:5775474-5775493 None:intergenic 20.0%
!!! AAAAAAAATCACTTGAGTTT+TGG + chr7_4:5775580-5775599 None:intergenic 20.0%
!!! TATTATTTGGAGTATCATTA+TGG + chr7_4:5775607-5775626 None:intergenic 20.0%
!! TTTGATGTGTTACATATATA+AGG - chr7_4:5775790-5775809 Msa1137090:intron 20.0%
!! AGAAAAATATACCTGATTTA+AGG + chr7_4:5775870-5775889 None:intergenic 20.0%
!!! CTCAGATTTTTATTTTGTTT+TGG - chr7_4:5777067-5777086 Msa1137090:intron 20.0%
!! ATTTAAAAATAAGAACCTGA+AGG + chr7_4:5777154-5777173 None:intergenic 20.0%
!! ATCTGTGAAAATAAAAATCA+TGG + chr7_4:5777230-5777249 None:intergenic 20.0%
!! TTTAAATTTACCAAAAGTAG+GGG + chr7_4:5777302-5777321 None:intergenic 20.0%
!! CTTTAAATTTACCAAAAGTA+GGG + chr7_4:5777303-5777322 None:intergenic 20.0%
!!! ATACTCTTATTGTTATTTCT+TGG - chr7_4:5777373-5777392 Msa1137090:intron 20.0%
!! TGATATTAAAAACTGAAAGT+GGG + chr7_4:5777780-5777799 None:intergenic 20.0%
!! TTGATATTAAAAACTGAAAG+TGG + chr7_4:5777781-5777800 None:intergenic 20.0%
!! ATATTTCCAGTCAATATTAA+GGG - chr7_4:5778045-5778064 Msa1137090:intron 20.0%
!! AATGTATTAGTATTTACCAT+AGG + chr7_4:5778157-5778176 None:intergenic 20.0%
! GAAATACAAACAATGTTTAG+AGG - chr7_4:5775183-5775202 Msa1137090:intron 25.0%
!!! TTGTTTTGGAATATATATGC+AGG - chr7_4:5775482-5775501 Msa1137090:intron 25.0%
!!! ACTTTTTTCTTCCCTTTTAT+AGG - chr7_4:5775632-5775651 Msa1137090:intron 25.0%
!!! CTTTTTTCTTCCCTTTTATA+GGG - chr7_4:5775633-5775652 Msa1137090:intron 25.0%
! CAGCTTAATTGCATTATATT+TGG + chr7_4:5776523-5776542 None:intergenic 25.0%
! CAAATATAATGCAATTAAGC+TGG - chr7_4:5776521-5776540 Msa1137090:intron 25.0%
!!! AAAGTATTGGTTGAATATGA+TGG - chr7_4:5776733-5776752 Msa1137090:intron 25.0%
!! AGGAAGATGAAAATTTTGAA+TGG + chr7_4:5776810-5776829 None:intergenic 25.0%
! ATCTACTCATGAAGAAAAAT+AGG + chr7_4:5776830-5776849 None:intergenic 25.0%
!! ATTTTTCTTCATGAGTAGAT+TGG - chr7_4:5776830-5776849 Msa1137090:intron 25.0%
!!! TATTGGTGTATTTTTGTCAT+AGG - chr7_4:5777092-5777111 Msa1137090:intron 25.0%
!! TCAGATTTTCCAAGAATTAT+TGG + chr7_4:5777180-5777199 None:intergenic 25.0%
! AATAAAAATCATGGTTGAGT+TGG + chr7_4:5777221-5777240 None:intergenic 25.0%
!! GCTTTAAATTTACCAAAAGT+AGG + chr7_4:5777304-5777323 None:intergenic 25.0%
! GATATTAAAAACTGAAAGTG+GGG + chr7_4:5777779-5777798 None:intergenic 25.0%
! GATATTTCCAGTCAATATTA+AGG - chr7_4:5778044-5778063 Msa1137090:intron 25.0%
! TATTTCCAGTCAATATTAAG+GGG - chr7_4:5778046-5778065 Msa1137090:intron 25.0%
!! ATTGGTTTCTTGAACTAAAT+GGG + chr7_4:5778249-5778268 None:intergenic 25.0%
!!! TATTGGTTTCTTGAACTAAA+TGG + chr7_4:5778250-5778269 None:intergenic 25.0%
! CAACAGACTATAAAAAAACA+AGG + chr7_4:5778503-5778522 None:intergenic 25.0%
!!! CTTGTTTTTTTATAGTCTGT+TGG - chr7_4:5778501-5778520 Msa1137090:CDS 25.0%
!! GTTAAGGCATTATACTATTA+AGG + chr7_4:5778626-5778645 None:intergenic 25.0%
GAATAAGAGAACCATTGATA+GGG - chr7_4:5774683-5774702 Msa1137090:three_prime_UTR 30.0%
AATAAGAGAACCATTGATAG+GGG - chr7_4:5774684-5774703 Msa1137090:three_prime_UTR 30.0%
GTTTGTGGTTCTTATGAATT+TGG - chr7_4:5774784-5774803 Msa1137090:CDS 30.0%
! GTATGTGTTTAATTTCTCTG+TGG - chr7_4:5774937-5774956 Msa1137090:intron 30.0%
!!! GTTATTTTGTTTTTTCAGGC+TGG - chr7_4:5774967-5774986 Msa1137090:intron 30.0%
GATTTAATTGCATGTACCTT+AGG - chr7_4:5775073-5775092 Msa1137090:CDS 30.0%
CATAGGAAATAGACTGAAAA+TGG - chr7_4:5775112-5775131 Msa1137090:CDS 30.0%
GTAATTATACAGTTGAACCT+TGG - chr7_4:5775134-5775153 Msa1137090:intron 30.0%
! GTAATTTTCTTTGCCTTTTG+CGG - chr7_4:5775267-5775286 Msa1137090:intron 30.0%
!!! GCTTGTTATTTACTTTTCTG+AGG - chr7_4:5775542-5775561 Msa1137090:intron 30.0%
! TATTTGGAGTATCATTATGG+CGG + chr7_4:5775604-5775623 None:intergenic 30.0%
! GTATCAGTGTCATTCATAAT+TGG - chr7_4:5776007-5776026 Msa1137090:intron 30.0%
TAATTGGAACAGTACTTTCA+TGG - chr7_4:5776023-5776042 Msa1137090:intron 30.0%
TCATATGATCTTCTTCTTAG+TGG + chr7_4:5776099-5776118 None:intergenic 30.0%
AAATAAGTGTTTGCAATTGC+AGG - chr7_4:5776166-5776185 Msa1137090:intron 30.0%
ATTTAGATGAAAACATGCAG+TGG - chr7_4:5776280-5776299 Msa1137090:CDS 30.0%
! TTCATTATTTGGTTGGTACT+TGG + chr7_4:5776330-5776349 None:intergenic 30.0%
ACTAGTTATATAATCCTGTG+TGG + chr7_4:5776561-5776580 None:intergenic 30.0%
AAATGAACTGATATTCAGAG+TGG + chr7_4:5776666-5776685 None:intergenic 30.0%
! ATTTTCTTCAAGAATGTGTG+TGG - chr7_4:5776682-5776701 Msa1137090:intron 30.0%
AGAGGTGGAAAATAAAGTAT+TGG - chr7_4:5776720-5776739 Msa1137090:intron 30.0%
!! AGTAGTATTTTTGATCTAGC+AGG - chr7_4:5776911-5776930 Msa1137090:intron 30.0%
! AAGTATGATGGTGTTAAACT+TGG + chr7_4:5776967-5776986 None:intergenic 30.0%
! TGATATGCAAGAAAGTATGA+TGG + chr7_4:5776979-5776998 None:intergenic 30.0%
TATAATATACGCTATCCTTC+AGG - chr7_4:5777136-5777155 Msa1137090:CDS 30.0%
!! TAAGAGTATCATACATGAAG+TGG + chr7_4:5777362-5777381 None:intergenic 30.0%
!! GTTATTTCTTGGTTTCGATT+AGG - chr7_4:5777384-5777403 Msa1137090:intron 30.0%
AAGCTGTAAAGTTCTTAGTT+GGG + chr7_4:5777475-5777494 None:intergenic 30.0%
! TACATAGGATCGTTTTCAAT+AGG - chr7_4:5777702-5777721 Msa1137090:intron 30.0%
!! TCTTAAGTGCAACTTGTTTT+AGG + chr7_4:5777853-5777872 None:intergenic 30.0%
AAAAGAAAAACAGTTCCAGT+CGG + chr7_4:5777895-5777914 None:intergenic 30.0%
! GTTTTTCTTTTTCTTTGACC+TGG - chr7_4:5777904-5777923 Msa1137090:intron 30.0%
! CATGAGAAAGTTGAAAGTAT+AGG + chr7_4:5778124-5778143 None:intergenic 30.0%
AGTAAACTTGCATGTTCTAT+TGG + chr7_4:5778267-5778286 None:intergenic 30.0%
TAAAAGCCTTGAACAATTAC+AGG - chr7_4:5778381-5778400 Msa1137090:CDS 30.0%
GGATGAATGTATTAGAGTTA+AGG + chr7_4:5778642-5778661 None:intergenic 30.0%
CATAGTCATCAATACTACCA+AGG - chr7_4:5774585-5774604 Msa1137090:three_prime_UTR 35.0%
TGTGTACAATCTTAGTTCCT+TGG + chr7_4:5774605-5774624 None:intergenic 35.0%
AACTAAGATTGTACACACAC+AGG - chr7_4:5774608-5774627 Msa1137090:three_prime_UTR 35.0%
AGTGAAGATGGATATCAAAG+AGG - chr7_4:5774636-5774655 Msa1137090:three_prime_UTR 35.0%
GGAATAAGAGAACCATTGAT+AGG - chr7_4:5774682-5774701 Msa1137090:three_prime_UTR 35.0%
!! TTGTTTTGTTCCCCTATCAA+TGG + chr7_4:5774697-5774716 None:intergenic 35.0%
CTAAAAGATGCTTGATTGCT+TGG - chr7_4:5774885-5774904 Msa1137090:intron 35.0%
TTCCTAATAGCTTCTTGAGT+TGG + chr7_4:5775003-5775022 None:intergenic 35.0%
AACTCAAGAAGCTATTAGGA+AGG - chr7_4:5775002-5775021 Msa1137090:intron 35.0%
ATTGATTATACTAGCAGCCA+AGG + chr7_4:5775154-5775173 None:intergenic 35.0%
TAAATGCAGTACTCCTTGTT+TGG - chr7_4:5775296-5775315 Msa1137090:intron 35.0%
ATGATTGGTGCAATAACAAG+TGG - chr7_4:5775341-5775360 Msa1137090:intron 35.0%
!! TCAAGTGCTTTTTGTATTGC+AGG - chr7_4:5775516-5775535 Msa1137090:intron 35.0%
!! CAAGTGCTTTTTGTATTGCA+GGG - chr7_4:5775517-5775536 Msa1137090:intron 35.0%
!!! AATGGGGGTTTTTTCATTTG+TGG - chr7_4:5775698-5775717 Msa1137090:intron 35.0%
! TACCTGATTTAAGGTAGTCA+GGG + chr7_4:5775861-5775880 None:intergenic 35.0%
! ATACCTGATTTAAGGTAGTC+AGG + chr7_4:5775862-5775881 None:intergenic 35.0%
TTATTACTTACCAGCCATCT+AGG + chr7_4:5776244-5776263 None:intergenic 35.0%
ACCAACCAAATAATGAATGC+AGG - chr7_4:5776333-5776352 Msa1137090:intron 35.0%
CTTTGCCTGCATTCATTATT+TGG + chr7_4:5776341-5776360 None:intergenic 35.0%
AGATGCTGATATATCTGAAG+AGG - chr7_4:5776411-5776430 Msa1137090:intron 35.0%
GTCTTTATTATTGTGCCTGA+AGG + chr7_4:5776494-5776513 None:intergenic 35.0%
AAGATATTTACGCTCACTCA+CGG - chr7_4:5776625-5776644 Msa1137090:intron 35.0%
TTCATGAGTAGATTGGAGTA+GGG - chr7_4:5776837-5776856 Msa1137090:intron 35.0%
! TTATGGTTTGCCAGCAATTA+GGG - chr7_4:5776861-5776880 Msa1137090:intron 35.0%
!! AATCATGGTTGAGTTGGATT+CGG + chr7_4:5777215-5777234 None:intergenic 35.0%
! TTTTCACAGATTGTGATCAC+AGG - chr7_4:5777239-5777258 Msa1137090:intron 35.0%
GAAGCTGTAAAGTTCTTAGT+TGG + chr7_4:5777476-5777495 None:intergenic 35.0%
CTCTTTCTACTGCTGATATT+AGG - chr7_4:5777677-5777696 Msa1137090:intron 35.0%
TGCTGATATTAGGTCTACAT+AGG - chr7_4:5777687-5777706 Msa1137090:intron 35.0%
! AGGATCGTTTTCAATAGGAA+TGG - chr7_4:5777707-5777726 Msa1137090:intron 35.0%
! GGATCGTTTTCAATAGGAAT+GGG - chr7_4:5777708-5777727 Msa1137090:intron 35.0%
TAAAAACTGAAAGTGGGGAA+AGG + chr7_4:5777774-5777793 None:intergenic 35.0%
AAAGAAAAACAGTTCCAGTC+GGG + chr7_4:5777894-5777913 None:intergenic 35.0%
! AAGAGGACACATTTTGTAAC+CGG + chr7_4:5777978-5777997 None:intergenic 35.0%
GTGTCCTCTTAGTAAAAAGA+CGG - chr7_4:5777988-5778007 Msa1137090:intron 35.0%
! TATGCCGTCTTTTTACTAAG+AGG + chr7_4:5777995-5778014 None:intergenic 35.0%
CTTTCAACTTTCTCATGAGT+TGG - chr7_4:5778127-5778146 Msa1137090:intron 35.0%
! TTGTTCAAGGCTTTTACCTT+TGG + chr7_4:5778377-5778396 None:intergenic 35.0%
TTTGCGATTTGTGTAGTGTT+TGG - chr7_4:5778425-5778444 Msa1137090:CDS 35.0%
GATTGTGACTGTGTCTGTAT+AGG + chr7_4:5774566-5774585 None:intergenic 40.0%
ACACAGGTTAAGAGTGAAGA+TGG - chr7_4:5774624-5774643 Msa1137090:three_prime_UTR 40.0%
GATGGATATCAAAGAGGATG+TGG - chr7_4:5774642-5774661 Msa1137090:three_prime_UTR 40.0%
GATATCAAAGAGGATGTGGA+AGG - chr7_4:5774646-5774665 Msa1137090:three_prime_UTR 40.0%
GATGATGATCTTTGCTTGCA+TGG + chr7_4:5774729-5774748 None:intergenic 40.0%
GCAAAGATCATCATCATCCA+TGG - chr7_4:5774734-5774753 Msa1137090:three_prime_UTR 40.0%
AGATCATCATCATCCATGGA+TGG - chr7_4:5774738-5774757 Msa1137090:three_prime_UTR 40.0%
ACCACATTCATTGCAGTTTG+TGG - chr7_4:5774769-5774788 Msa1137090:exon 40.0%
ACCACAAACTGCAATGAATG+TGG + chr7_4:5774773-5774792 None:intergenic 40.0%
CTCCAACTCAAGAAGCTATT+AGG - chr7_4:5774998-5775017 Msa1137090:intron 40.0%
GAAGGATCTTAGTCTGTCTT+TGG - chr7_4:5775020-5775039 Msa1137090:intron 40.0%
GCATTTAGTCAATCCGCAAA+AGG + chr7_4:5775283-5775302 None:intergenic 40.0%
! TTTGGCTCCATCTTGACATT+TGG - chr7_4:5775314-5775333 Msa1137090:intron 40.0%
!! TTGACATTTGGTGCGATGAT+TGG - chr7_4:5775326-5775345 Msa1137090:intron 40.0%
ACTAGCAACAGGATATGGAA+TGG - chr7_4:5775680-5775699 Msa1137090:intron 40.0%
CTAGCAACAGGATATGGAAT+GGG - chr7_4:5775681-5775700 Msa1137090:intron 40.0%
TAGCAACAGGATATGGAATG+GGG - chr7_4:5775682-5775701 Msa1137090:intron 40.0%
!!! GGGGTTTTTTCATTTGTGGT+TGG - chr7_4:5775702-5775721 Msa1137090:intron 40.0%
TTGGAACAGTACTTTCATGG+AGG - chr7_4:5776026-5776045 Msa1137090:intron 40.0%
TGGAACAGTACTTTCATGGA+GGG - chr7_4:5776027-5776046 Msa1137090:intron 40.0%
! TGGAGGGCTTTAGCTATAAT+CGG - chr7_4:5776043-5776062 Msa1137090:CDS 40.0%
GCCTGCATTCATTATTTGGT+TGG + chr7_4:5776337-5776356 None:intergenic 40.0%
GCAGCATTACAAATACTTCG+CGG - chr7_4:5776385-5776404 Msa1137090:intron 40.0%
TGAAGAGGCAGAAGAAATTC+AGG - chr7_4:5776426-5776445 Msa1137090:intron 40.0%
AGGTAACTGTGTGTTAGTGT+TGG - chr7_4:5776446-5776465 Msa1137090:intron 40.0%
TATTAAGTGACCTTGCCTTC+AGG - chr7_4:5776476-5776495 Msa1137090:intron 40.0%
TATTATTGTGCCTGAAGGCA+AGG + chr7_4:5776489-5776508 None:intergenic 40.0%
TGAAACAAATCCAGCACCTT+CGG + chr7_4:5776602-5776621 None:intergenic 40.0%
TTCTTCAAGAATGTGTGTGG+TGG - chr7_4:5776685-5776704 Msa1137090:intron 40.0%
CTTCATGAGTAGATTGGAGT+AGG - chr7_4:5776836-5776855 Msa1137090:intron 40.0%
! CTTATGGTTTGCCAGCAATT+AGG - chr7_4:5776860-5776879 Msa1137090:intron 40.0%
! TATGGTTTGCCAGCAATTAG+GGG - chr7_4:5776862-5776881 Msa1137090:intron 40.0%
!! ATCATGGTTGAGTTGGATTC+GGG + chr7_4:5777214-5777233 None:intergenic 40.0%
CTTGGTTTCGATTAGGTATC+TGG - chr7_4:5777391-5777410 Msa1137090:intron 40.0%
TTCGATTAGGTATCTGGATC+AGG - chr7_4:5777397-5777416 Msa1137090:intron 40.0%
TTAGGTATCTGGATCAGGAT+TGG - chr7_4:5777402-5777421 Msa1137090:intron 40.0%
AGCAGTTGCATTCTATCTCA+AGG - chr7_4:5777444-5777463 Msa1137090:intron 40.0%
! CCATACCAATATGCCGATTA+CGG + chr7_4:5777589-5777608 None:intergenic 40.0%
AAGAAAAACAGTTCCAGTCG+GGG + chr7_4:5777893-5777912 None:intergenic 40.0%
! TCTTTTTCTTTGACCTGGAG+AGG - chr7_4:5777909-5777928 Msa1137090:intron 40.0%
TAAATCAACTTCGAATCCGC+CGG - chr7_4:5777956-5777975 Msa1137090:intron 40.0%
CTGGAAATATCTGCAGCATA+AGG + chr7_4:5778035-5778054 None:intergenic 40.0%
GCATAGCAACATTAGTGAAC+TGG - chr7_4:5778079-5778098 Msa1137090:intron 40.0%
GCAACATTAGTGAACTGGTT+TGG - chr7_4:5778084-5778103 Msa1137090:intron 40.0%
!! GGCTTTTACCTTTGGTTTCT+GGG + chr7_4:5778369-5778388 None:intergenic 40.0%
!! AGGCTTTTACCTTTGGTTTC+TGG + chr7_4:5778370-5778389 None:intergenic 40.0%
GCAAACTTCCTATGCGTTAA+TGG + chr7_4:5778410-5778429 None:intergenic 40.0%
! GTGTAGTGTTTGGTGGAAAT+TGG - chr7_4:5778435-5778454 Msa1137090:CDS 40.0%
GGTGGAAATTGGAACAACAA+AGG - chr7_4:5778446-5778465 Msa1137090:CDS 40.0%
ATCAAAGAGGATGTGGAAGG+TGG - chr7_4:5774649-5774668 Msa1137090:three_prime_UTR 45.0%
GTGGTGAAGTAAACCATCCA+TGG + chr7_4:5774754-5774773 None:intergenic 45.0%
TCTTAGTCTGTCTTTGGCAG+AGG - chr7_4:5775026-5775045 Msa1137090:intron 45.0%
TGTCAAGATGGAGCCAAACA+AGG + chr7_4:5775312-5775331 None:intergenic 45.0%
CATCGCACCAAATGTCAAGA+TGG + chr7_4:5775324-5775343 None:intergenic 45.0%
CTTCCAACGAAATCGGCAAT+AGG + chr7_4:5775368-5775387 None:intergenic 45.0%
!! TGCCGATTTCGTTGGAAGAA+AGG - chr7_4:5775370-5775389 Msa1137090:intron 45.0%
! GCCGATTTCGTTGGAAGAAA+GGG - chr7_4:5775371-5775390 Msa1137090:intron 45.0%
CCCCTTTCTTCCAACGAAAT+CGG + chr7_4:5775375-5775394 None:intergenic 45.0%
CCGATTTCGTTGGAAGAAAG+GGG - chr7_4:5775372-5775391 Msa1137090:intron 45.0%
CGATTTCGTTGGAAGAAAGG+GGG - chr7_4:5775373-5775392 Msa1137090:intron 45.0%
GGAAGAAAGGGGGTAATTTC+AGG - chr7_4:5775383-5775402 Msa1137090:intron 45.0%
!! GTGCTTTTTGTATTGCAGGG+TGG - chr7_4:5775520-5775539 Msa1137090:intron 45.0%
!! AGGCACTGGACCCTATAAAA+GGG + chr7_4:5775646-5775665 None:intergenic 45.0%
!! AAGGCACTGGACCCTATAAA+AGG + chr7_4:5775647-5775666 None:intergenic 45.0%
TTTATAGGGTCCAGTGCCTT+TGG - chr7_4:5775647-5775666 Msa1137090:intron 45.0%
GTCCAGTGCCTTTGGATATT+GGG - chr7_4:5775655-5775674 Msa1137090:intron 45.0%
! GCTAGTCTCCCAATATCCAA+AGG + chr7_4:5775666-5775685 None:intergenic 45.0%
GATATTGGGAGACTAGCAAC+AGG - chr7_4:5775669-5775688 Msa1137090:intron 45.0%
AGCAACAGGATATGGAATGG+GGG - chr7_4:5775683-5775702 Msa1137090:intron 45.0%
GCAATTTCTGCTACGAACAC+AGG + chr7_4:5775818-5775837 None:intergenic 45.0%
TGCCCTGACTACCTTAAATC+AGG - chr7_4:5775856-5775875 Msa1137090:intron 45.0%
TCATTCCAGAGTCTCCTAGA+TGG - chr7_4:5776227-5776246 Msa1137090:intron 45.0%
TAATGAATGCAGGCAAAGCG+AGG - chr7_4:5776343-5776362 Msa1137090:intron 45.0%
! AGGACGCGCAAAAGATTTTG+TGG - chr7_4:5776363-5776382 Msa1137090:intron 45.0%
!! AATGTGTGTGGTGGACTACT+AGG - chr7_4:5776694-5776713 Msa1137090:intron 45.0%
GTAGATTGGAGTAGGGCTTA+TGG - chr7_4:5776844-5776863 Msa1137090:intron 45.0%
! ATGGTTTGCCAGCAATTAGG+GGG - chr7_4:5776863-5776882 Msa1137090:intron 45.0%
!! CATTGATTCCCCCTAATTGC+TGG + chr7_4:5776874-5776893 None:intergenic 45.0%
CAGCAATTAGGGGGAATCAA+TGG - chr7_4:5776872-5776891 Msa1137090:intron 45.0%
CATAGGATTTCCTTCTGCGA+CGG - chr7_4:5777109-5777128 Msa1137090:intron 45.0%
ATAGGATTTCCTTCTGCGAC+GGG - chr7_4:5777110-5777129 Msa1137090:intron 45.0%
!! TCATGGTTGAGTTGGATTCG+GGG + chr7_4:5777213-5777232 None:intergenic 45.0%
CAGATTGTGATCACAGGTGT+TGG - chr7_4:5777245-5777264 Msa1137090:intron 45.0%
TTACCAAAAGTAGGGGCTTC+CGG + chr7_4:5777295-5777314 None:intergenic 45.0%
GATATCCTTGTGCGAGTAAC+AGG - chr7_4:5777527-5777546 Msa1137090:intron 45.0%
ATGAACCTGTTACTCGCACA+AGG + chr7_4:5777535-5777554 None:intergenic 45.0%
CGAGTAACAGGTTCATGAAG+TGG - chr7_4:5777539-5777558 Msa1137090:intron 45.0%
ACTTGCCGTAATCGGCATAT+TGG - chr7_4:5777581-5777600 Msa1137090:intron 45.0%
CCGTAATCGGCATATTGGTA+TGG - chr7_4:5777586-5777605 Msa1137090:intron 45.0%
TAGGAATGGGAGCAATTCCA+TGG - chr7_4:5777721-5777740 Msa1137090:intron 45.0%
AGGAATGGGAGCAATTCCAT+GGG - chr7_4:5777722-5777741 Msa1137090:intron 45.0%
ACTGAAAGTGGGGAAAGGAT+GGG + chr7_4:5777769-5777788 None:intergenic 45.0%
AACTGAAAGTGGGGAAAGGA+TGG + chr7_4:5777770-5777789 None:intergenic 45.0%
CGCATAAATAGATCCTCTCC+AGG + chr7_4:5777925-5777944 None:intergenic 45.0%
! AGGACACATTTTGTAACCGG+CGG + chr7_4:5777975-5777994 None:intergenic 45.0%
TCCAGTCAATATTAAGGGGC+AGG - chr7_4:5778050-5778069 Msa1137090:intron 45.0%
!! TAGTGAACTGGTTTGGTGCA+TGG - chr7_4:5778091-5778110 Msa1137090:intron 45.0%
GATTGCAGCGTAAAGAACGA+AGG + chr7_4:5778311-5778330 None:intergenic 45.0%
GTAGTAGTCCCAGAAACCAA+AGG - chr7_4:5778358-5778377 Msa1137090:intron 45.0%
TGGCTGCCTGTAATTGTTCA+AGG + chr7_4:5778390-5778409 None:intergenic 45.0%
GCGATTTGTGTAGTGTTTGG+TGG - chr7_4:5778428-5778447 Msa1137090:CDS 45.0%
GTGGAAGGTGGCAATCAGAA+AGG - chr7_4:5774661-5774680 Msa1137090:three_prime_UTR 50.0%
!! GGACCTATTGCCGATTTCGT+TGG - chr7_4:5775362-5775381 Msa1137090:intron 50.0%
GGTCCAGTGCCTTTGGATAT+TGG - chr7_4:5775654-5775673 Msa1137090:intron 50.0%
! CTCCCAATATCCAAAGGCAC+TGG + chr7_4:5775660-5775679 None:intergenic 50.0%
GGGAGACTAGCAACAGGATA+TGG - chr7_4:5775675-5775694 Msa1137090:intron 50.0%
ATTGCGCCAAAAGAACTCCG+AGG - chr7_4:5775833-5775852 Msa1137090:intron 50.0%
! TTAAGGTAGTCAGGGCACCT+CGG + chr7_4:5775853-5775872 None:intergenic 50.0%
GCAACACAGCAGTGGGAATA+AGG + chr7_4:5776192-5776211 None:intergenic 50.0%
AGAACAGCTCGCAAAACCGA+AGG - chr7_4:5776583-5776602 Msa1137090:CDS 50.0%
!! TGGTGGACTACTAGGTTGAG+AGG - chr7_4:5776702-5776721 Msa1137090:intron 50.0%
! TGGACTACTAGGTTGAGAGG+TGG - chr7_4:5776705-5776724 Msa1137090:intron 50.0%
TAGGATTTCCTTCTGCGACG+GGG - chr7_4:5777111-5777130 Msa1137090:intron 50.0%
ATTATACTCCCCGTCGCAGA+AGG + chr7_4:5777122-5777141 None:intergenic 50.0%
!! CATGGTTGAGTTGGATTCGG+GGG + chr7_4:5777212-5777231 None:intergenic 50.0%
!! TCTGGATCAGGATTGGTTGC+AGG - chr7_4:5777409-5777428 Msa1137090:intron 50.0%
ACAGGTTCATGAAGTGGCTG+TGG - chr7_4:5777545-5777564 Msa1137090:intron 50.0%
CAGGTTCATGAAGTGGCTGT+GGG - chr7_4:5777546-5777565 Msa1137090:intron 50.0%
TGAAAGTGGGGAAAGGATGG+GGG + chr7_4:5777767-5777786 None:intergenic 50.0%
CTGAAAGTGGGGAAAGGATG+GGG + chr7_4:5777768-5777787 None:intergenic 50.0%
GCAAAATGTTGATCCCCGAC+TGG - chr7_4:5777877-5777896 Msa1137090:intron 50.0%
GCCTGCCCCTTAATATTGAC+TGG + chr7_4:5778054-5778073 None:intergenic 50.0%
GTCAATATTAAGGGGCAGGC+AGG - chr7_4:5778054-5778073 Msa1137090:intron 50.0%
! CTCATGAGTTGGAGCTCCTA+TGG - chr7_4:5778138-5778157 Msa1137090:intron 50.0%
ACAGGCAGCCATTAACGCAT+AGG - chr7_4:5778399-5778418 Msa1137090:CDS 50.0%
!! AGGGCACCTCGGAGTTCTTT+TGG + chr7_4:5775842-5775861 None:intergenic 55.0%
!! TCCCACTGCTGTGTTGCTTC+TGG - chr7_4:5776195-5776214 Msa1137090:intron 55.0%
CCCAGAAGCAACACAGCAGT+GGG + chr7_4:5776199-5776218 None:intergenic 55.0%
!! CCCACTGCTGTGTTGCTTCT+GGG - chr7_4:5776196-5776215 Msa1137090:intron 55.0%
ACCCAGAAGCAACACAGCAG+TGG + chr7_4:5776200-5776219 None:intergenic 55.0%
TCCAGAGTCTCCTAGATGGC+TGG - chr7_4:5776231-5776250 Msa1137090:intron 55.0%
ACCAGCCATCTAGGAGACTC+TGG + chr7_4:5776235-5776254 None:intergenic 55.0%
CGTATCTGTCACTGCCACAC+AGG - chr7_4:5776544-5776563 Msa1137090:intron 55.0%
GCAGCCCTCATAGATAGAGC+AGG - chr7_4:5777269-5777288 Msa1137090:intron 55.0%
CCGGCCTGCTCTATCTATGA+GGG + chr7_4:5777276-5777295 None:intergenic 55.0%
CCCTCATAGATAGAGCAGGC+CGG - chr7_4:5777273-5777292 Msa1137090:intron 55.0%
TCCGGCCTGCTCTATCTATG+AGG + chr7_4:5777277-5777296 None:intergenic 55.0%
GTCCCAGCACTTGCCGTAAT+CGG - chr7_4:5777573-5777592 Msa1137090:intron 55.0%
! TGCCGATTACGGCAAGTGCT+GGG + chr7_4:5777578-5777597 None:intergenic 55.0%
! ATGCCGATTACGGCAAGTGC+TGG + chr7_4:5777579-5777598 None:intergenic 55.0%
! TCCATGGGTTGTGATGTCCG+AGG - chr7_4:5777737-5777756 Msa1137090:intron 55.0%
ACCTCGGACATCACAACCCA+TGG + chr7_4:5777741-5777760 None:intergenic 55.0%
!! GAAAGGATGGGGGAGTACCT+CGG + chr7_4:5777757-5777776 None:intergenic 55.0%
! GCTCGCAAAACCGAAGGTGC+TGG - chr7_4:5776589-5776608 Msa1137090:CDS 60.0%
! AGGCCGGAAGCCCCTACTTT+TGG - chr7_4:5777289-5777308 Msa1137090:intron 60.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 5774523 5778669 5774523 ID=Msa1137090;Name=Msa1137090
chr7_4 mRNA 5774523 5778669 5774523 ID=Msa1137090-mRNA-1;Parent=Msa1137090;Name=Msa1137090-mRNA-1;_AED=0.32;_eAED=0.32;_QI=120|1|1|1|1|1|18|249|475
chr7_4 exon 5774523 5774887 5774523 ID=Msa1137090-mRNA-1:exon:1601;Parent=Msa1137090-mRNA-1
chr7_4 exon 5775033 5775147 5775033 ID=Msa1137090-mRNA-1:exon:1600;Parent=Msa1137090-mRNA-1
chr7_4 exon 5775434 5775493 5775434 ID=Msa1137090-mRNA-1:exon:1599;Parent=Msa1137090-mRNA-1
chr7_4 exon 5775590 5775643 5775590 ID=Msa1137090-mRNA-1:exon:1598;Parent=Msa1137090-mRNA-1
chr7_4 exon 5775727 5775786 5775727 ID=Msa1137090-mRNA-1:exon:1597;Parent=Msa1137090-mRNA-1
chr7_4 exon 5775882 5775944 5775882 ID=Msa1137090-mRNA-1:exon:1596;Parent=Msa1137090-mRNA-1
chr7_4 exon 5776035 5776078 5776035 ID=Msa1137090-mRNA-1:exon:1595;Parent=Msa1137090-mRNA-1
chr7_4 exon 5776260 5776344 5776260 ID=Msa1137090-mRNA-1:exon:1594;Parent=Msa1137090-mRNA-1
chr7_4 exon 5776546 5776626 5776546 ID=Msa1137090-mRNA-1:exon:1593;Parent=Msa1137090-mRNA-1
chr7_4 exon 5776745 5776837 5776745 ID=Msa1137090-mRNA-1:exon:1592;Parent=Msa1137090-mRNA-1
chr7_4 exon 5776940 5777004 5776940 ID=Msa1137090-mRNA-1:exon:1591;Parent=Msa1137090-mRNA-1
chr7_4 exon 5777128 5777203 5777128 ID=Msa1137090-mRNA-1:exon:1590;Parent=Msa1137090-mRNA-1
chr7_4 exon 5777315 5777380 5777315 ID=Msa1137090-mRNA-1:exon:1589;Parent=Msa1137090-mRNA-1
chr7_4 exon 5777473 5777538 5777473 ID=Msa1137090-mRNA-1:exon:1588;Parent=Msa1137090-mRNA-1
chr7_4 exon 5777629 5777688 5777629 ID=Msa1137090-mRNA-1:exon:1587;Parent=Msa1137090-mRNA-1
chr7_4 exon 5777798 5777887 5777798 ID=Msa1137090-mRNA-1:exon:1586;Parent=Msa1137090-mRNA-1
chr7_4 exon 5778145 5778207 5778145 ID=Msa1137090-mRNA-1:exon:1585;Parent=Msa1137090-mRNA-1
chr7_4 exon 5778379 5778669 5778379 ID=Msa1137090-mRNA-1:exon:1584;Parent=Msa1137090-mRNA-1
chr7_4 five_prime_UTR 5778550 5778669 5778550 ID=Msa1137090-mRNA-1:five_prime_utr;Parent=Msa1137090-mRNA-1
chr7_4 CDS 5778379 5778549 5778379 ID=Msa1137090-mRNA-1:cds;Parent=Msa1137090-mRNA-1
chr7_4 CDS 5778145 5778207 5778145 ID=Msa1137090-mRNA-1:cds;Parent=Msa1137090-mRNA-1
chr7_4 CDS 5777798 5777887 5777798 ID=Msa1137090-mRNA-1:cds;Parent=Msa1137090-mRNA-1
chr7_4 CDS 5777629 5777688 5777629 ID=Msa1137090-mRNA-1:cds;Parent=Msa1137090-mRNA-1
chr7_4 CDS 5777473 5777538 5777473 ID=Msa1137090-mRNA-1:cds;Parent=Msa1137090-mRNA-1
chr7_4 CDS 5777315 5777380 5777315 ID=Msa1137090-mRNA-1:cds;Parent=Msa1137090-mRNA-1
chr7_4 CDS 5777128 5777203 5777128 ID=Msa1137090-mRNA-1:cds;Parent=Msa1137090-mRNA-1
chr7_4 CDS 5776940 5777004 5776940 ID=Msa1137090-mRNA-1:cds;Parent=Msa1137090-mRNA-1
chr7_4 CDS 5776745 5776837 5776745 ID=Msa1137090-mRNA-1:cds;Parent=Msa1137090-mRNA-1
chr7_4 CDS 5776546 5776626 5776546 ID=Msa1137090-mRNA-1:cds;Parent=Msa1137090-mRNA-1
chr7_4 CDS 5776260 5776344 5776260 ID=Msa1137090-mRNA-1:cds;Parent=Msa1137090-mRNA-1
chr7_4 CDS 5776035 5776078 5776035 ID=Msa1137090-mRNA-1:cds;Parent=Msa1137090-mRNA-1
chr7_4 CDS 5775882 5775944 5775882 ID=Msa1137090-mRNA-1:cds;Parent=Msa1137090-mRNA-1
chr7_4 CDS 5775727 5775786 5775727 ID=Msa1137090-mRNA-1:cds;Parent=Msa1137090-mRNA-1
chr7_4 CDS 5775590 5775643 5775590 ID=Msa1137090-mRNA-1:cds;Parent=Msa1137090-mRNA-1
chr7_4 CDS 5775434 5775493 5775434 ID=Msa1137090-mRNA-1:cds;Parent=Msa1137090-mRNA-1
chr7_4 CDS 5775033 5775147 5775033 ID=Msa1137090-mRNA-1:cds;Parent=Msa1137090-mRNA-1
chr7_4 CDS 5774772 5774887 5774772 ID=Msa1137090-mRNA-1:cds;Parent=Msa1137090-mRNA-1
chr7_4 three_prime_UTR 5774523 5774771 5774523 ID=Msa1137090-mRNA-1:three_prime_utr;Parent=Msa1137090-mRNA-1
Gene Sequence

>Msa1137090

ATGGATATCAAAGAGGATGTGGAAGGTGGCAATCAGAAAGGAATAAGAGAACCATTGATAGGGGAACAAAACAATCAACTTGTCCATGCAAGCAAAGATCATCATCATCCATGGATGGTTTACTTCACCACATTCATTGCAGTTTGTGGTTCTTATGAATTTGGTGCTTGTGCTGGATATTCATCTCCAACTCAAGAAGCTATTAGGAAGGATCTTAGTCTGTCTTTGGCAGAGTACTCCTTGTTTGGCTCCATCTTGACATTTGGTGCGATGATTGGTGCAATAACAAGTGGACCTATTGCCGATTTCGTTGGAAGAAAGGGGGCAATGAGAGTGTCAAGTGCTTTTTGTATTGCAGGGTGGCTTGTTATTTACTTTTCTGAGGGTCCAGTGCCTTTGGATATTGGGAGACTAGCAACAGGATATGGAATGGGGGTTTTTTCATTTGTGGTTCCTGTGTTCGTAGCAGAAATTGCGCCAAAAGAACTCCGAGGTGCCCTGACTACCTTAAATCAGTTCATGATTGTTACTGCTGTATCAGTGTCATTCATAATTGGAACAGTACTTTCATGGAGGGCTTTAGCTATAATCGGCCTTATTCCCACTGCTGTGTTGCTTCTGGGTCTGTTTTTCATTCCAGAGTCTCCTAGATGGCTGGCAAAGCGAGGACGCGCAAAAGATTTTGTGGCAGCATTACAAATACTTCGCGGTAAAGATGCTGATATATCTGAAGAGGCAGAAGAAATTCAGGATTATATAACTAGTTTAGAACAGCTCGCAAAACCGAAGGTGCTGGATTTGTTTCAAAGAAGATATTTACGCTCACTCACGATTGGAGTAGGGCTTATGGTTTGCCAGCAATTAGGGGGAATCAATGGTGTTTGCTTTTATACTAGTAGTATTTTTGATCTAGCAGGATTTCCTTCTGCGACGGGGAGTATAATATACGCTATCCTTCAGATTGTGATCACAGGTGTTGGAGCAGCCCTCATAGATAGAGCAGGCCGGAAGCCCCTACTTTTGGTATCTGGATCAGGATTGGTTGCAGGATGTATATTTACAGCAGTTGCATTCTATCTCAAGGTTCATGAAGTGGCTGTGGGAGCAGTCCCAGCACTTGCCGTAATCGGCATATTGGTCTACATAGGATCGTTTTCAATAGGAATGGGAGCAATTCCATGGGTTGTGATGTCCGAGATATTTCCAGTCAATATTAAGGGGCAGGCAGGAAGCATAGCAACATTAGTGAACTGGTTTGGTGCATGGTTATGCTCCTATACTTTCAACTTTCTCATGAGTTGGAGCTCCTATGGTACCTTCGTTCTTTACGCTGCAATCAATGCACTGTCTATATTATTTATAGTTGTAGTAGTCCCAGAAACCAAAGGTAAAAGCCTTGAACAATTACAGGCAGCCATTAACGCATAG
Protein sequence

>Msa1137090

MDIKEDVEGGNQKGIREPLIGEQNNQLVHASKDHHHPWMVYFTTFIAVCGSYEFGACAGYSSPTQEAIRKDLSLSLAEYSLFGSILTFGAMIGAITSGPIADFVGRKGAMRVSSAFCIAGWLVIYFSEGPVPLDIGRLATGYGMGVFSFVVPVFVAEIAPKELRGALTTLNQFMIVTAVSVSFIIGTVLSWRALAIIGLIPTAVLLLGLFFIPESPRWLAKRGRAKDFVAALQILRGKDADISEEAEEIQDYITSLEQLAKPKVLDLFQRRYLRSLTIGVGLMVCQQLGGINGVCFYTSSIFDLAGFPSATGSIIYAILQIVITGVGAALIDRAGRKPLLLVSGSGLVAGCIFTAVAFYLKVHEVAVGAVPALAVIGILVYIGSFSIGMGAIPWVVMSEIFPVNIKGQAGSIATLVNWFGAWLCSYTFNFLMSWSSYGTFVLYAAINALSILFIVVVVPETKGKSLEQLQAAINA*