Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037020 | AES81593.2 | 90.385 | 364 | 23 | 4 | 1 | 363 | 24 | 376 | 0.0 | 605 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037020 | G7KXF9 | 90.385 | 364 | 23 | 4 | 1 | 363 | 24 | 376 | 0.0 | 605 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa1037020 | -0.816896 | 4.364933e-52 | -8.615850e-47 |
| Msa0002800 | Msa1037020 | 0.800131 | 1.663941e-48 | -8.615850e-47 |
| Msa0055280 | Msa1037020 | 0.809084 | 2.253907e-50 | -8.615850e-47 |
| Msa0101060 | Msa1037020 | 0.824393 | 8.272469e-54 | -8.615850e-47 |
| Msa0620640 | Msa1037020 | 0.812227 | 4.714684e-51 | -8.615850e-47 |
| Msa0638280 | Msa1037020 | 0.800294 | 1.541721e-48 | -8.615850e-47 |
| Msa0638320 | Msa1037020 | 0.801301 | 9.606970e-49 | -8.615850e-47 |
| Msa0724560 | Msa1037020 | 0.801437 | 9.010168e-49 | -8.615850e-47 |
| Msa0743650 | Msa1037020 | 0.821005 | 5.081031e-53 | -8.615850e-47 |
| Msa0755080 | Msa1037020 | 0.817402 | 3.359432e-52 | -8.615850e-47 |
| Msa0755090 | Msa1037020 | 0.813890 | 2.035878e-51 | -8.615850e-47 |
| Msa0787730 | Msa1037020 | 0.814215 | 1.725645e-51 | -8.615850e-47 |
| Msa0789270 | Msa1037020 | 0.825215 | 5.294376e-54 | -8.615850e-47 |
| Msa0789280 | Msa1037020 | 0.821509 | 3.887689e-53 | -8.615850e-47 |
| Msa0789290 | Msa1037020 | 0.819704 | 1.009745e-52 | -8.615850e-47 |
| Msa0789300 | Msa1037020 | 0.817810 | 2.718380e-52 | -8.615850e-47 |
| Msa0796950 | Msa1037020 | 0.810329 | 1.216562e-50 | -8.615850e-47 |
| Msa0797000 | Msa1037020 | 0.806738 | 7.110106e-50 | -8.615850e-47 |
| Msa0828570 | Msa1037020 | 0.809549 | 1.791401e-50 | -8.615850e-47 |
| Msa0834450 | Msa1037020 | 0.829356 | 5.388454e-55 | -8.615850e-47 |
| Msa0834460 | Msa1037020 | 0.837855 | 4.063239e-57 | -8.615850e-47 |
| Msa0148120 | Msa1037020 | 0.805848 | 1.094900e-49 | -8.615850e-47 |
| Msa0223100 | Msa1037020 | 0.851308 | 9.657590e-61 | -8.615850e-47 |
| Msa0223290 | Msa1037020 | 0.868087 | 8.471813e-66 | -8.615850e-47 |
| Msa0223380 | Msa1037020 | 0.847645 | 1.014540e-59 | -8.615850e-47 |
| Msa0377280 | Msa1037020 | 0.816422 | 5.577056e-52 | -8.615850e-47 |
| Msa0377530 | Msa1037020 | 0.880471 | 5.340887e-70 | -8.615850e-47 |
| Msa0379540 | Msa1037020 | 0.813253 | 2.811004e-51 | -8.615850e-47 |
| Msa0380040 | Msa1037020 | 0.822559 | 2.220412e-53 | -8.615850e-47 |
| Msa0404220 | Msa1037020 | 0.831345 | 1.759711e-55 | -8.615850e-47 |
| Msa0404690 | Msa1037020 | 0.802327 | 5.913437e-49 | -8.615850e-47 |
| Msa0404700 | Msa1037020 | 0.819201 | 1.314998e-52 | -8.615850e-47 |
| Msa0412760 | Msa1037020 | 0.805437 | 1.335637e-49 | -8.615850e-47 |
| Msa0426810 | Msa1037020 | 0.885824 | 5.826529e-72 | -8.615850e-47 |
| Msa0429290 | Msa1037020 | 0.817812 | 2.715622e-52 | -8.615850e-47 |
| Msa0462540 | Msa1037020 | 0.818298 | 2.108707e-52 | -8.615850e-47 |
| Msa0462590 | Msa1037020 | 0.805745 | 1.150781e-49 | -8.615850e-47 |
| Msa0467920 | Msa1037020 | -0.841659 | 4.156511e-58 | -8.615850e-47 |
| Msa0473240 | Msa1037020 | 0.820944 | 5.247400e-53 | -8.615850e-47 |
| Msa0475580 | Msa1037020 | 0.821677 | 3.554980e-53 | -8.615850e-47 |
| Msa1037020 | Msa1075590 | 0.861222 | 1.193909e-63 | -8.615850e-47 |
| Msa1037020 | Msa1077670 | 0.901070 | 3.885743e-78 | -8.615850e-47 |
| Msa1037020 | Msa1137090 | 0.863892 | 1.799352e-64 | -8.615850e-47 |
| Msa1037020 | Msa1162980 | 0.882967 | 6.676198e-71 | -8.615850e-47 |
| Msa1037020 | Msa1164530 | 0.997069 | 2.068824e-236 | -8.615850e-47 |
| Msa1037020 | Msa1168040 | -0.804264 | 2.348188e-49 | -8.615850e-47 |
| Msa1037020 | Msa1174870 | 0.814375 | 1.590473e-51 | -8.615850e-47 |
| Msa1037020 | Msa1213020 | 0.802569 | 5.272427e-49 | -8.615850e-47 |
| Msa1037020 | Msa1219810 | 0.814836 | 1.257762e-51 | -8.615850e-47 |
| Msa1037020 | Msa1234690 | 0.800904 | 1.157996e-48 | -8.615850e-47 |
| Msa1037020 | Msa1234730 | 0.807718 | 4.407701e-50 | -8.615850e-47 |
| Msa1037020 | Msa1272950 | 0.818663 | 1.742618e-52 | -8.615850e-47 |
| Msa1037020 | Msa1315110 | 0.811323 | 7.413728e-51 | -8.615850e-47 |
| Msa1037020 | Msa1368980 | 0.942671 | 4.754424e-102 | -8.615850e-47 |
| Msa1037020 | Msa1427830 | 0.819423 | 1.170818e-52 | -8.615850e-47 |
| Msa1037020 | Msa1454110 | 0.831277 | 1.828275e-55 | -8.615850e-47 |
| Msa1037020 | Msa1456650 | 0.810287 | 1.242626e-50 | -8.615850e-47 |
| Msa0253370 | Msa1037020 | 0.827234 | 1.751024e-54 | -8.615850e-47 |
| Msa0268090 | Msa1037020 | 0.811352 | 7.307622e-51 | -8.615850e-47 |
| Msa0292180 | Msa1037020 | 0.828647 | 8.004585e-55 | -8.615850e-47 |
| Msa0302650 | Msa1037020 | 0.858384 | 8.549308e-63 | -8.615850e-47 |
| Msa0330400 | Msa1037020 | 0.813367 | 2.653738e-51 | -8.615850e-47 |
| Msa0339870 | Msa1037020 | 0.803457 | 3.454965e-49 | -8.615850e-47 |
| Msa0362060 | Msa1037020 | 0.828026 | 1.129876e-54 | -8.615850e-47 |
| Msa0363100 | Msa1037020 | 0.820036 | 8.479784e-53 | -8.615850e-47 |
| Msa0363170 | Msa1037020 | 0.829384 | 5.305205e-55 | -8.615850e-47 |
| Msa0490300 | Msa1037020 | 0.821246 | 4.472096e-53 | -8.615850e-47 |
| Msa0504410 | Msa1037020 | 0.844837 | 5.901417e-59 | -8.615850e-47 |
| Msa0517490 | Msa1037020 | 0.873654 | 1.243540e-67 | -8.615850e-47 |
| Msa0519220 | Msa1037020 | 0.841157 | 5.632516e-58 | -8.615850e-47 |
| Msa0530380 | Msa1037020 | 0.812387 | 4.349687e-51 | -8.615850e-47 |
| Msa0579340 | Msa1037020 | 0.804324 | 2.281212e-49 | -8.615850e-47 |
| Msa0848900 | Msa1037020 | 0.800225 | 1.592587e-48 | -8.615850e-47 |
| Msa0863770 | Msa1037020 | 0.819890 | 9.156238e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037020 | MtrunA17_Chr7g0262061 | 90.385 | 364 | 23 | 4 | 1 | 363 | 1 | 353 | 0.0 | 603 |
| Msa1037020 | MtrunA17_Chr7g0262541 | 76.330 | 376 | 63 | 11 | 1 | 363 | 1 | 363 | 2.31e-163 | 461 |
| Msa1037020 | MtrunA17_Chr1g0186111 | 51.908 | 131 | 58 | 2 | 209 | 339 | 250 | 375 | 8.04e-40 | 144 |
| Msa1037020 | MtrunA17_Chr1g0186111 | 40.517 | 232 | 97 | 7 | 120 | 344 | 38 | 235 | 1.05e-39 | 144 |
| Msa1037020 | MtrunA17_Chr4g0063891 | 57.547 | 106 | 42 | 1 | 231 | 333 | 153 | 258 | 1.17e-36 | 134 |
| Msa1037020 | MtrunA17_Chr5g0411051 | 52.083 | 96 | 46 | 0 | 240 | 335 | 125 | 220 | 2.62e-32 | 121 |
| Msa1037020 | MtrunA17_Chr2g0333081 | 50.000 | 104 | 52 | 0 | 237 | 340 | 139 | 242 | 3.82e-31 | 119 |
| Msa1037020 | MtrunA17_Chr3g0104511 | 38.776 | 98 | 60 | 0 | 238 | 335 | 400 | 497 | 2.41e-17 | 83.2 |
| Msa1037020 | MtrunA17_Chr3g0104511 | 28.834 | 163 | 88 | 6 | 204 | 338 | 303 | 465 | 9.49e-11 | 63.2 |
| Msa1037020 | MtrunA17_Chr5g0436741 | 34.259 | 108 | 71 | 0 | 228 | 335 | 289 | 396 | 2.07e-16 | 80.1 |
| Msa1037020 | MtrunA17_Chr4g0003301 | 43.548 | 62 | 35 | 0 | 263 | 324 | 5 | 66 | 2.45e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037020 | AT4G17940.1 | 53.535 | 99 | 46 | 0 | 237 | 335 | 150 | 248 | 2.50e-34 | 128 |
| Msa1037020 | AT5G20190.1 | 55.789 | 95 | 42 | 0 | 240 | 334 | 159 | 253 | 2.17e-33 | 125 |
| Msa1037020 | AT1G04530.1 | 57.692 | 104 | 41 | 2 | 232 | 335 | 118 | 218 | 5.09e-31 | 120 |
| Msa1037020 | AT1G04530.1 | 33.898 | 118 | 58 | 2 | 240 | 337 | 193 | 310 | 2.96e-14 | 73.2 |
| Msa1037020 | AT4G32340.1 | 53.535 | 99 | 45 | 1 | 237 | 334 | 110 | 208 | 3.10e-28 | 110 |
| Msa1037020 | AT1G80130.1 | 50.495 | 101 | 50 | 0 | 233 | 333 | 161 | 261 | 1.24e-27 | 110 |
| Msa1037020 | AT2G29670.1 | 42.857 | 98 | 56 | 0 | 238 | 335 | 421 | 518 | 6.10e-20 | 91.7 |
| Msa1037020 | AT2G29670.2 | 42.857 | 98 | 56 | 0 | 238 | 335 | 421 | 518 | 6.10e-20 | 91.7 |
| Msa1037020 | AT1G07280.3 | 40.351 | 114 | 61 | 1 | 237 | 350 | 435 | 541 | 4.82e-19 | 89.0 |
| Msa1037020 | AT1G07280.1 | 40.351 | 114 | 61 | 1 | 237 | 350 | 435 | 541 | 4.82e-19 | 89.0 |
| Msa1037020 | AT1G07280.2 | 40.351 | 114 | 61 | 1 | 237 | 350 | 435 | 541 | 4.82e-19 | 89.0 |
| Msa1037020 | AT3G47080.1 | 41.414 | 99 | 58 | 0 | 237 | 335 | 400 | 498 | 3.43e-16 | 80.1 |
Find 162 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTCGTTTATGTCTCTTTA+AGG | 0.121559 | 7_1:-73534373 | None:intergenic |
| GAAACCCGGCTTGTGATTTC+TGG | 0.126802 | 7_1:-73533937 | None:intergenic |
| CCAAGGTTAACTGGCTTAAT+TGG | 0.183967 | 7_1:-73534421 | None:intergenic |
| GTCCTTTGATACTTTACTTT+TGG | 0.211606 | 7_1:-73532329 | None:intergenic |
| CAGTTCGTTGACTACTTAAA+TGG | 0.212815 | 7_1:-73534018 | None:intergenic |
| GTGGCAAGTGGTTGATTATT+TGG | 0.253972 | 7_1:-73532039 | None:intergenic |
| TCCTTGTGTTTAATTACTTC+AGG | 0.267734 | 7_1:-73534182 | None:intergenic |
| AGCTCTTCAACACCAGTTCT+TGG | 0.272535 | 7_1:+73532414 | Msa1037020:CDS |
| TTATGCTCAGTTTCTGTATA+AGG | 0.290532 | 7_1:+73533172 | Msa1037020:CDS |
| AGGATTCAGGATGAAGACTA+TGG | 0.297329 | 7_1:-73532491 | None:intergenic |
| GATTATAGTTCCATGGGTTC+TGG | 0.300216 | 7_1:+73533059 | Msa1037020:CDS |
| CAATTCTCTTCCTTATATAA+AGG | 0.301517 | 7_1:+73532064 | Msa1037020:five_prime_UTR |
| CACAGTATGGGAAGCTGGTT+TGG | 0.310028 | 7_1:+73533502 | Msa1037020:CDS |
| ACGCGTAGCTTACAAAGTTT+TGG | 0.321115 | 7_1:-73534241 | None:intergenic |
| GTCATTTGGATCTGCTAGTA+TGG | 0.327394 | 7_1:-73533466 | None:intergenic |
| TGAAGAGAGATTCAATTATA+TGG | 0.329630 | 7_1:+73532713 | Msa1037020:CDS |
| CCTCGTTTATGTCTCTTTAA+GGG | 0.333533 | 7_1:-73534372 | None:intergenic |
| CTTGTTCTTATCCGTTCATT+TGG | 0.335935 | 7_1:+73534064 | Msa1037020:three_prime_UTR |
| CCGCGTATGCAAGTTTCCTT+TGG | 0.343155 | 7_1:+73533725 | Msa1037020:CDS |
| TAAACCAGATCCTTTATATA+AGG | 0.343497 | 7_1:-73532074 | None:intergenic |
| GACAGAACTTCTCCGTCATT+TGG | 0.350188 | 7_1:-73533480 | None:intergenic |
| GGAGAAGTTCTGTCACAGTA+TGG | 0.354968 | 7_1:+73533489 | Msa1037020:CDS |
| GGAAGAATATTACAAGAAAA+TGG | 0.355814 | 7_1:+73533112 | Msa1037020:CDS |
| GGTTCTCTCCTATCTTCTTC+CGG | 0.364585 | 7_1:+73532435 | Msa1037020:CDS |
| AAGAGATATATTCCATCATC+AGG | 0.373387 | 7_1:+73534145 | Msa1037020:three_prime_UTR |
| CAAGATCAGGTGATGAGAAT+TGG | 0.375406 | 7_1:-73532162 | None:intergenic |
| TATTCATATATCATGCATTA+AGG | 0.379109 | 7_1:+73532015 | Msa1037020:five_prime_UTR |
| TTCTCTCTTTCAAAGCAAAC+AGG | 0.386547 | 7_1:+73532798 | Msa1037020:CDS |
| GTAATGGTTGTGGATGGTTT+AGG | 0.389844 | 7_1:+73534310 | Msa1037020:three_prime_UTR |
| TTAAGTGCATGAAAGGATTC+AGG | 0.398047 | 7_1:-73532504 | None:intergenic |
| CATCACCTGATCTTGCTTCA+AGG | 0.401878 | 7_1:+73532170 | Msa1037020:five_prime_UTR |
| CGTCAAATTGTCTACAAGAT+AGG | 0.402681 | 7_1:+73534619 | Msa1037020:three_prime_UTR |
| AATGATGGAGATAGTAATCA+TGG | 0.406178 | 7_1:+73533086 | Msa1037020:CDS |
| CTATGGGAATGATGATGAAT+AGG | 0.407108 | 7_1:-73532474 | None:intergenic |
| CTCAGAAACAATGGGTTCCC+AGG | 0.407926 | 7_1:-73533146 | None:intergenic |
| CGCGTATGCAAGTTTCCTTT+GGG | 0.410780 | 7_1:+73533726 | Msa1037020:CDS |
| ACGTGATTGTTACAGATTGT+AGG | 0.411205 | 7_1:-73534599 | None:intergenic |
| TCTTCCTTATATAAAGGATC+TGG | 0.415688 | 7_1:+73532070 | Msa1037020:five_prime_UTR |
| TCAGCAATGGAAGGAGAGAT+TGG | 0.418500 | 7_1:-73532600 | None:intergenic |
| CTACTTAAATGGTTACAAAC+TGG | 0.423507 | 7_1:-73534007 | None:intergenic |
| CTCCAGTACAACACAGAACT+AGG | 0.426451 | 7_1:+73534526 | Msa1037020:three_prime_UTR |
| CCTTGTGTTTAATTACTTCA+GGG | 0.432857 | 7_1:-73534181 | None:intergenic |
| AGTTCAATCTGAAGGGAACT+TGG | 0.434632 | 7_1:+73532656 | Msa1037020:CDS |
| AGCATATTCTGATGCACATA+AGG | 0.436021 | 7_1:+73533879 | Msa1037020:three_prime_UTR |
| CCGGGTTTCTGTTGCAGTGT+CGG | 0.438004 | 7_1:+73533951 | Msa1037020:three_prime_UTR |
| TTGTATTTGTACCTGTCATC+AGG | 0.438683 | 7_1:-73533585 | None:intergenic |
| TACTGCTCGTTCAAAATAGC+TGG | 0.441969 | 7_1:-73533553 | None:intergenic |
| TTCAGTGAGACAAAGATGTT+TGG | 0.449053 | 7_1:+73532755 | Msa1037020:CDS |
| TCCCTAGTTCTGTGTTGTAC+TGG | 0.451277 | 7_1:-73534528 | None:intergenic |
| TGAAGGAACCGGAAGAAGAT+AGG | 0.454703 | 7_1:-73532443 | None:intergenic |
| GGTCAAATTGAACTAGTAGT+TGG | 0.454946 | 7_1:-73534578 | None:intergenic |
| GGACTCATCAGAATCTGAAA+AGG | 0.461980 | 7_1:+73532192 | Msa1037020:five_prime_UTR |
| ATTGAAATGTATCTTGCAAA+GGG | 0.463349 | 7_1:+73532975 | Msa1037020:CDS |
| GGTGTTGATGTGAGTGGTGA+TGG | 0.469703 | 7_1:+73533002 | Msa1037020:CDS |
| AGGACTATCTGTGAAGGAAC+CGG | 0.472882 | 7_1:-73532454 | None:intergenic |
| AATATTCCTCTGCTCCTTCA+CGG | 0.473833 | 7_1:-73533434 | None:intergenic |
| ATATGGACTCTTCTTCTAAG+AGG | 0.475130 | 7_1:+73532730 | Msa1037020:CDS |
| ACAGTATGGGAAGCTGGTTT+GGG | 0.478494 | 7_1:+73533503 | Msa1037020:CDS |
| TGCTTTGAAAGAGAGAAAGA+TGG | 0.480264 | 7_1:-73532792 | None:intergenic |
| AAGAGAAAATAATGTATTCA+AGG | 0.483105 | 7_1:-73534503 | None:intergenic |
| TGGATCTGCTAGTATGGCTC+TGG | 0.483784 | 7_1:-73533460 | None:intergenic |
| CCAATTAAGCCAGTTAACCT+TGG | 0.489049 | 7_1:+73534421 | Msa1037020:three_prime_UTR |
| ATGGGTTCTGGAGGGAATGA+TGG | 0.489888 | 7_1:+73533071 | Msa1037020:CDS |
| TTTGCTAAAAGCATTGCAAT+GGG | 0.494903 | 7_1:+73534458 | Msa1037020:three_prime_UTR |
| AGGTGGTGATTATAGTTCCA+TGG | 0.497150 | 7_1:+73533052 | Msa1037020:CDS |
| TTTGATGAGGAGGGACAGGT+TGG | 0.498943 | 7_1:+73532948 | Msa1037020:CDS |
| GGTGGCTGCAGAGGAGGGAA+TGG | 0.499605 | 7_1:+73533029 | Msa1037020:CDS |
| GATAGGAGAGAACCAAGAAC+TGG | 0.506501 | 7_1:-73532426 | None:intergenic |
| TCTGTCACAGTATGGGAAGC+TGG | 0.506983 | 7_1:+73533497 | Msa1037020:CDS |
| ATTTGCTAAAAGCATTGCAA+TGG | 0.507222 | 7_1:+73534457 | Msa1037020:three_prime_UTR |
| ATACATTACAACCCTGATGA+TGG | 0.509796 | 7_1:-73534157 | None:intergenic |
| ATAAAAGCACCAACTTATGA+AGG | 0.514128 | 7_1:+73534089 | Msa1037020:three_prime_UTR |
| TCAGGTGATGAGAATTGGAC+AGG | 0.515437 | 7_1:-73532157 | None:intergenic |
| TTCAACTCAAGTTGGAGCAA+AGG | 0.516481 | 7_1:-73531891 | None:intergenic |
| GATTGTGATGATGATGATGT+TGG | 0.516587 | 7_1:-73532554 | None:intergenic |
| AGTAGTGTGCTGAATAGTAC+TGG | 0.517028 | 7_1:+73532873 | Msa1037020:CDS |
| GGTGGTGATTATAGTTCCAT+GGG | 0.517897 | 7_1:+73533053 | Msa1037020:CDS |
| ATTAGAAGAGTTCAATCTGA+AGG | 0.520058 | 7_1:+73532648 | Msa1037020:CDS |
| TTTGGAGCTATGGCAACTAC+AGG | 0.520195 | 7_1:+73533811 | Msa1037020:CDS |
| CATAATTCCTCAGAAACAAT+GGG | 0.520475 | 7_1:-73533154 | None:intergenic |
| GAGTCCCTTGAAGCAAGATC+AGG | 0.521924 | 7_1:-73532175 | None:intergenic |
| AGTAATTAAACACAAGGATG+TGG | 0.524529 | 7_1:+73534187 | Msa1037020:three_prime_UTR |
| ATCACCTGATCTTGCTTCAA+GGG | 0.524561 | 7_1:+73532171 | Msa1037020:five_prime_UTR |
| ATGTATCTTGCAAAGGGACT+TGG | 0.525659 | 7_1:+73532981 | Msa1037020:CDS |
| CTCCAAAAGTAAAGTATCAA+AGG | 0.525663 | 7_1:+73532327 | Msa1037020:five_prime_UTR |
| GACTCATCAGAATCTGAAAA+GGG | 0.526066 | 7_1:+73532193 | Msa1037020:five_prime_UTR |
| TATTGAAATGTATCTTGCAA+AGG | 0.532810 | 7_1:+73532974 | Msa1037020:CDS |
| GACATTCAAGATCAAAGTAA+TGG | 0.533871 | 7_1:+73534294 | Msa1037020:three_prime_UTR |
| TGCAGAGGAGGGAATGGAGG+TGG | 0.534796 | 7_1:+73533035 | Msa1037020:CDS |
| ATCATTCCCTCCAGAACCCA+TGG | 0.538649 | 7_1:-73533069 | None:intergenic |
| GTTGTTACAACTAGTAGCAT+AGG | 0.539151 | 7_1:-73532688 | None:intergenic |
| GCAACTAAACAATGCTCTGA+TGG | 0.539446 | 7_1:+73534218 | Msa1037020:three_prime_UTR |
| AGAACCAGAAATCACAAGCC+GGG | 0.539619 | 7_1:+73533933 | Msa1037020:three_prime_UTR |
| TGATTGGTTGATGATGATTG+AGG | 0.540528 | 7_1:-73532373 | None:intergenic |
| GGCTGCAGAGGAGGGAATGG+AGG | 0.542066 | 7_1:+73533032 | Msa1037020:CDS |
| GGTATAGGTGGCTGCAGAGG+AGG | 0.542557 | 7_1:+73533023 | Msa1037020:CDS |
| ATGATGGAGATAGTAATCAT+GGG | 0.542937 | 7_1:+73533087 | Msa1037020:CDS |
| ATCTTGAAAGACAAAACAAA+GGG | 0.547476 | 7_1:+73532622 | Msa1037020:CDS |
| CAAGATCAAAGTAATGGTTG+TGG | 0.548382 | 7_1:+73534300 | Msa1037020:three_prime_UTR |
| TCAGAAACAATGGGTTCCCA+GGG | 0.550997 | 7_1:-73533145 | None:intergenic |
| CTGGGAACCCATTGTTTCTG+AGG | 0.551696 | 7_1:+73533147 | Msa1037020:CDS |
| TTATTTAGGTATTGAATGAG+TGG | 0.558343 | 7_1:-73531950 | None:intergenic |
| TGGTTGATGATGATTGAGGA+TGG | 0.561065 | 7_1:-73532369 | None:intergenic |
| GCATAATTCCTCAGAAACAA+TGG | 0.561255 | 7_1:-73533155 | None:intergenic |
| AGAAAGATGGAATGGTCTCA+AGG | 0.561384 | 7_1:-73532779 | None:intergenic |
| TGAAAGAGAGAAAGATGGAA+TGG | 0.562440 | 7_1:-73532787 | None:intergenic |
| TATAGTTCCATGGGTTCTGG+AGG | 0.562677 | 7_1:+73533062 | Msa1037020:CDS |
| CCCTGAAGTAATTAAACACA+AGG | 0.563988 | 7_1:+73534181 | Msa1037020:three_prime_UTR |
| AAATTGTCTACAAGATAGGC+TGG | 0.565762 | 7_1:+73534623 | Msa1037020:three_prime_UTR |
| TTTAGGTATTGAATGAGTGG+TGG | 0.566079 | 7_1:-73531947 | None:intergenic |
| GATGTGAGTGGTGATGGTAT+AGG | 0.566548 | 7_1:+73533008 | Msa1037020:CDS |
| TGGAGCGAAGTGGTTGGTGG+TGG | 0.569007 | 7_1:-73532534 | None:intergenic |
| TTGTCTTTCAAGATCAGCAA+TGG | 0.569009 | 7_1:-73532613 | None:intergenic |
| GAGAAGTTCTGTCACAGTAT+GGG | 0.569625 | 7_1:+73533490 | Msa1037020:CDS |
| ATCAAAGTAATGGTTGTGGA+TGG | 0.572140 | 7_1:+73534304 | Msa1037020:three_prime_UTR |
| TACAAGCTTCTCCTGATGAC+AGG | 0.573449 | 7_1:+73533574 | Msa1037020:CDS |
| AGGAAGACTATTGTCTATGT+CGG | 0.574637 | 7_1:+73534341 | Msa1037020:three_prime_UTR |
| GGATGGTTTAGGATCAGAGC+AGG | 0.574666 | 7_1:+73534321 | Msa1037020:three_prime_UTR |
| TATAAGGAAGAGAATTGTAG+TGG | 0.575151 | 7_1:-73532058 | None:intergenic |
| ACAGAGGAAGACGAGGATGC+AGG | 0.575261 | 7_1:+73533751 | Msa1037020:CDS |
| CCAAAGGAAACTTGCATACG+CGG | 0.576728 | 7_1:-73533725 | None:intergenic |
| TAGATGCTTAAGTGCATGAA+AGG | 0.576922 | 7_1:-73532511 | None:intergenic |
| CGTCTTCCTCTGTGTCCCAA+AGG | 0.579496 | 7_1:-73533741 | None:intergenic |
| CTTTCAAGATCAGCAATGGA+AGG | 0.579663 | 7_1:-73532609 | None:intergenic |
| GTGAGTGGTGATGGTATAGG+TGG | 0.580814 | 7_1:+73533011 | Msa1037020:CDS |
| AAAATGGTTCAGCAAAACCC+TGG | 0.581315 | 7_1:+73533128 | Msa1037020:CDS |
| AATGTTGAGGCAAACATTGT+GGG | 0.586251 | 7_1:-73533783 | None:intergenic |
| TGTTGGAGCGAAGTGGTTGG+TGG | 0.586507 | 7_1:-73532537 | None:intergenic |
| TGGAGATAGTAATCATGGGG+TGG | 0.587358 | 7_1:+73533091 | Msa1037020:CDS |
| AAGAGAATTGTAGTGGCAAG+TGG | 0.588566 | 7_1:-73532051 | None:intergenic |
| GGATTCAGGATGAAGACTAT+GGG | 0.588650 | 7_1:-73532490 | None:intergenic |
| TATTGAATGAGTGGTGGACA+AGG | 0.592452 | 7_1:-73531941 | None:intergenic |
| TCCAGTACAACACAGAACTA+GGG | 0.596520 | 7_1:+73534527 | Msa1037020:three_prime_UTR |
| AGCTGATATATTCGATAGAG+CGG | 0.596561 | 7_1:-73534551 | None:intergenic |
| TTAGAAGAGTTCAATCTGAA+GGG | 0.596938 | 7_1:+73532649 | Msa1037020:CDS |
| GTATAGGTGGCTGCAGAGGA+GGG | 0.597903 | 7_1:+73533024 | Msa1037020:CDS |
| GAGAACCAGAAATCACAAGC+CGG | 0.603281 | 7_1:+73533932 | Msa1037020:three_prime_UTR |
| GATTGTTTATATTCTTGCAA+AGG | 0.604248 | 7_1:+73534649 | Msa1037020:three_prime_UTR |
| CCGACACTGCAACAGAAACC+CGG | 0.605455 | 7_1:-73533951 | None:intergenic |
| GAAAGATGGAATGGTCTCAA+GGG | 0.610385 | 7_1:-73532778 | None:intergenic |
| GCTCCAAAATGAAAATGTTG+AGG | 0.611118 | 7_1:-73533796 | None:intergenic |
| GATCTTGAAAGACAAAACAA+AGG | 0.612241 | 7_1:+73532621 | Msa1037020:CDS |
| GAATAGTACTGGCAGTGGTG+TGG | 0.617162 | 7_1:+73532884 | Msa1037020:CDS |
| AAATGGTTCAGCAAAACCCT+GGG | 0.619938 | 7_1:+73533129 | Msa1037020:CDS |
| AGAGATATATTCCATCATCA+GGG | 0.621833 | 7_1:+73534146 | Msa1037020:three_prime_UTR |
| ATGAATAGGACTATCTGTGA+AGG | 0.622956 | 7_1:-73532460 | None:intergenic |
| GGTGGTAAATGATGAAGTGA+AGG | 0.634203 | 7_1:+73532905 | Msa1037020:CDS |
| AAATGTTGAGGCAAACATTG+TGG | 0.636468 | 7_1:-73533784 | None:intergenic |
| ACAAGACCGTGAAGGAGCAG+AGG | 0.636751 | 7_1:+73533428 | Msa1037020:CDS |
| TGATGGAGATAGTAATCATG+GGG | 0.637625 | 7_1:+73533088 | Msa1037020:CDS |
| GATGGTATAGGTGGCTGCAG+AGG | 0.639534 | 7_1:+73533020 | Msa1037020:CDS |
| ATAGTTCCATGGGTTCTGGA+GGG | 0.645436 | 7_1:+73533063 | Msa1037020:CDS |
| TGATGTTGGAGCGAAGTGGT+TGG | 0.647415 | 7_1:-73532540 | None:intergenic |
| ATACTAGCAGATCCAAATGA+CGG | 0.662236 | 7_1:+73533468 | Msa1037020:CDS |
| CAGTGCAAACAAGACCGTGA+AGG | 0.662241 | 7_1:+73533420 | Msa1037020:intron |
| TAGTACTGGCAGTGGTGTGG+TGG | 0.662574 | 7_1:+73532887 | Msa1037020:CDS |
| GGACTTGGTGTTGATGTGAG+TGG | 0.667908 | 7_1:+73532996 | Msa1037020:CDS |
| TTGGGACACAGAGGAAGACG+AGG | 0.672619 | 7_1:+73533744 | Msa1037020:CDS |
| GTGCTGAATAGTACTGGCAG+TGG | 0.681444 | 7_1:+73532879 | Msa1037020:CDS |
| ATGATGATGTTGGAGCGAAG+TGG | 0.693701 | 7_1:-73532544 | None:intergenic |
| AAGTTTCCTTTGGGACACAG+AGG | 0.726292 | 7_1:+73533735 | Msa1037020:CDS |
| CCCTTAAAGAGACATAAACG+AGG | 0.759862 | 7_1:+73534372 | Msa1037020:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAAAGGTTTATTTTATTT+AGG | - | chr7_1:73531967-73531986 | None:intergenic | 10.0% |
| !!! | AAATAAACCTTTTATTTTTT+TGG | + | chr7_1:73531972-73531991 | Msa1037020:five_prime_UTR | 10.0% |
| !!! | AATAAACCTTTTATTTTTTT+GGG | + | chr7_1:73531973-73531992 | Msa1037020:five_prime_UTR | 10.0% |
| !!! | TCTAGATTAAAATTTTGATA+TGG | - | chr7_1:73531919-73531938 | None:intergenic | 15.0% |
| !!! | TTTTCACCCAAAAAAATAAA+AGG | - | chr7_1:73531982-73532001 | None:intergenic | 20.0% |
| !! | TATTCATATATCATGCATTA+AGG | + | chr7_1:73532015-73532034 | Msa1037020:five_prime_UTR | 20.0% |
| !!! | TAAAAGAATTTTCAACAAGT+TGG | - | chr7_1:73533265-73533284 | None:intergenic | 20.0% |
| !! | AAGAGAAAATAATGTATTCA+AGG | - | chr7_1:73534506-73534525 | None:intergenic | 20.0% |
| !!! | TTATTTAGGTATTGAATGAG+TGG | - | chr7_1:73531953-73531972 | None:intergenic | 25.0% |
| ! | CAATTCTCTTCCTTATATAA+AGG | + | chr7_1:73532064-73532083 | Msa1037020:five_prime_UTR | 25.0% |
| ! | TAAACCAGATCCTTTATATA+AGG | - | chr7_1:73532077-73532096 | None:intergenic | 25.0% |
| ! | ATCTTGAAAGACAAAACAAA+GGG | + | chr7_1:73532622-73532641 | Msa1037020:CDS | 25.0% |
| ! | TGAAGAGAGATTCAATTATA+TGG | + | chr7_1:73532713-73532732 | Msa1037020:CDS | 25.0% |
| ! | TATTGAAATGTATCTTGCAA+AGG | + | chr7_1:73532974-73532993 | Msa1037020:CDS | 25.0% |
| ! | ATTGAAATGTATCTTGCAAA+GGG | + | chr7_1:73532975-73532994 | Msa1037020:CDS | 25.0% |
| ! | GGAAGAATATTACAAGAAAA+TGG | + | chr7_1:73533112-73533131 | Msa1037020:CDS | 25.0% |
| ! | ATTAGTGCATACAAAACTAT+TGG | + | chr7_1:73533362-73533381 | Msa1037020:intron | 25.0% |
| ! | GATTGTTTATATTCTTGCAA+AGG | + | chr7_1:73534649-73534668 | Msa1037020:three_prime_UTR | 25.0% |
| ! | ATATGGTTTTCAACTCAAGT+TGG | - | chr7_1:73531902-73531921 | None:intergenic | 30.0% |
| TATAAGGAAGAGAATTGTAG+TGG | - | chr7_1:73532061-73532080 | None:intergenic | 30.0% | |
| TCTTCCTTATATAAAGGATC+TGG | + | chr7_1:73532070-73532089 | Msa1037020:five_prime_UTR | 30.0% | |
| TGTGAGAAAAACATTAGTGA+TGG | - | chr7_1:73532249-73532268 | None:intergenic | 30.0% | |
| TACTGCAAGGAAAAAAAACT+TGG | - | chr7_1:73532298-73532317 | None:intergenic | 30.0% | |
| ! | CTCCAAAAGTAAAGTATCAA+AGG | + | chr7_1:73532327-73532346 | Msa1037020:five_prime_UTR | 30.0% |
| ! | GTCCTTTGATACTTTACTTT+TGG | - | chr7_1:73532332-73532351 | None:intergenic | 30.0% |
| ! | TTAGCAACATGTTTTCTGAT+TGG | - | chr7_1:73532392-73532411 | None:intergenic | 30.0% |
| GATCTTGAAAGACAAAACAA+AGG | + | chr7_1:73532621-73532640 | Msa1037020:CDS | 30.0% | |
| ATTAGAAGAGTTCAATCTGA+AGG | + | chr7_1:73532648-73532667 | Msa1037020:CDS | 30.0% | |
| TTAGAAGAGTTCAATCTGAA+GGG | + | chr7_1:73532649-73532668 | Msa1037020:CDS | 30.0% | |
| !! | GAAACTGATTTTGAAGATGA+AGG | + | chr7_1:73532834-73532853 | Msa1037020:CDS | 30.0% |
| ! | AATGATGGAGATAGTAATCA+TGG | + | chr7_1:73533086-73533105 | Msa1037020:CDS | 30.0% |
| ! | ATGATGGAGATAGTAATCAT+GGG | + | chr7_1:73533087-73533106 | Msa1037020:CDS | 30.0% |
| CATAATTCCTCAGAAACAAT+GGG | - | chr7_1:73533157-73533176 | None:intergenic | 30.0% | |
| TTATGCTCAGTTTCTGTATA+AGG | + | chr7_1:73533172-73533191 | Msa1037020:CDS | 30.0% | |
| ! | TCATTTTCAACTCCAAAACT+TGG | + | chr7_1:73533335-73533354 | Msa1037020:intron | 30.0% |
| ! | GCACTAATAAAACCAAGTTT+TGG | - | chr7_1:73533350-73533369 | None:intergenic | 30.0% |
| ! | TTGCCTCAACATTTTCATTT+TGG | + | chr7_1:73533793-73533812 | Msa1037020:CDS | 30.0% |
| !!! | ACATTTTCATTTTGGAGCTA+TGG | + | chr7_1:73533801-73533820 | Msa1037020:CDS | 30.0% |
| CTACTTAAATGGTTACAAAC+TGG | - | chr7_1:73534010-73534029 | None:intergenic | 30.0% | |
| ! | TGCTTTTATTGCCAAATGAA+CGG | - | chr7_1:73534078-73534097 | None:intergenic | 30.0% |
| !! | ATAAAAGCACCAACTTATGA+AGG | + | chr7_1:73534089-73534108 | Msa1037020:three_prime_UTR | 30.0% |
| AAGGAAAAACGAGATTACAA+GGG | + | chr7_1:73534108-73534127 | Msa1037020:three_prime_UTR | 30.0% | |
| AAGAGATATATTCCATCATC+AGG | + | chr7_1:73534145-73534164 | Msa1037020:three_prime_UTR | 30.0% | |
| AGAGATATATTCCATCATCA+GGG | + | chr7_1:73534146-73534165 | Msa1037020:three_prime_UTR | 30.0% | |
| CCTTGTGTTTAATTACTTCA+GGG | - | chr7_1:73534184-73534203 | None:intergenic | 30.0% | |
| TCCTTGTGTTTAATTACTTC+AGG | - | chr7_1:73534185-73534204 | None:intergenic | 30.0% | |
| AGTAATTAAACACAAGGATG+TGG | + | chr7_1:73534187-73534206 | Msa1037020:three_prime_UTR | 30.0% | |
| GACATTCAAGATCAAAGTAA+TGG | + | chr7_1:73534294-73534313 | Msa1037020:three_prime_UTR | 30.0% | |
| !! | AAATCTTGGTAACTTTTCCA+AGG | - | chr7_1:73534441-73534460 | None:intergenic | 30.0% |
| !! | ATTTGCTAAAAGCATTGCAA+TGG | + | chr7_1:73534457-73534476 | Msa1037020:three_prime_UTR | 30.0% |
| !! | TTTGCTAAAAGCATTGCAAT+GGG | + | chr7_1:73534458-73534477 | Msa1037020:three_prime_UTR | 30.0% |
| !! | TTTAGGTATTGAATGAGTGG+TGG | - | chr7_1:73531950-73531969 | None:intergenic | 35.0% |
| GACTCATCAGAATCTGAAAA+GGG | + | chr7_1:73532193-73532212 | Msa1037020:five_prime_UTR | 35.0% | |
| ! | AAAACATTAGTGATGGAGAG+AGG | - | chr7_1:73532242-73532261 | None:intergenic | 35.0% |
| GGAGTACAAATATTACTGCA+AGG | - | chr7_1:73532311-73532330 | None:intergenic | 35.0% | |
| !! | GAGGATGGATCAGTTTTATA+TGG | - | chr7_1:73532357-73532376 | None:intergenic | 35.0% |
| !! | TGATTGGTTGATGATGATTG+AGG | - | chr7_1:73532376-73532395 | None:intergenic | 35.0% |
| ATGAATAGGACTATCTGTGA+AGG | - | chr7_1:73532463-73532482 | None:intergenic | 35.0% | |
| ! | CTATGGGAATGATGATGAAT+AGG | - | chr7_1:73532477-73532496 | None:intergenic | 35.0% |
| TTAAGTGCATGAAAGGATTC+AGG | - | chr7_1:73532507-73532526 | None:intergenic | 35.0% | |
| TAGATGCTTAAGTGCATGAA+AGG | - | chr7_1:73532514-73532533 | None:intergenic | 35.0% | |
| ! | GATTGTGATGATGATGATGT+TGG | - | chr7_1:73532557-73532576 | None:intergenic | 35.0% |
| TTGTCTTTCAAGATCAGCAA+TGG | - | chr7_1:73532616-73532635 | None:intergenic | 35.0% | |
| GTTGTTACAACTAGTAGCAT+AGG | - | chr7_1:73532691-73532710 | None:intergenic | 35.0% | |
| ATATGGACTCTTCTTCTAAG+AGG | + | chr7_1:73532730-73532749 | Msa1037020:CDS | 35.0% | |
| TTCAGTGAGACAAAGATGTT+TGG | + | chr7_1:73532755-73532774 | Msa1037020:CDS | 35.0% | |
| TGAAAGAGAGAAAGATGGAA+TGG | - | chr7_1:73532790-73532809 | None:intergenic | 35.0% | |
| !! | TGCTTTGAAAGAGAGAAAGA+TGG | - | chr7_1:73532795-73532814 | None:intergenic | 35.0% |
| TTCTCTCTTTCAAAGCAAAC+AGG | + | chr7_1:73532798-73532817 | Msa1037020:CDS | 35.0% | |
| ! | AAGTGAAGGATAGAGTTTTC+AGG | + | chr7_1:73532919-73532938 | Msa1037020:CDS | 35.0% |
| ! | AGTGAAGGATAGAGTTTTCA+GGG | + | chr7_1:73532920-73532939 | Msa1037020:CDS | 35.0% |
| TGATGGAGATAGTAATCATG+GGG | + | chr7_1:73533088-73533107 | Msa1037020:CDS | 35.0% | |
| GCATAATTCCTCAGAAACAA+TGG | - | chr7_1:73533158-73533177 | None:intergenic | 35.0% | |
| GAGCTATACATTGAAACAGA+AGG | - | chr7_1:73533210-73533229 | None:intergenic | 35.0% | |
| ATACTAGCAGATCCAAATGA+CGG | + | chr7_1:73533468-73533487 | Msa1037020:CDS | 35.0% | |
| TTGTATTTGTACCTGTCATC+AGG | - | chr7_1:73533588-73533607 | None:intergenic | 35.0% | |
| ! | TTTAGATCGAGTTGCATACT+TGG | + | chr7_1:73533653-73533672 | Msa1037020:intron | 35.0% |
| AATGTTGAGGCAAACATTGT+GGG | - | chr7_1:73533786-73533805 | None:intergenic | 35.0% | |
| AAATGTTGAGGCAAACATTG+TGG | - | chr7_1:73533787-73533806 | None:intergenic | 35.0% | |
| GCTCCAAAATGAAAATGTTG+AGG | - | chr7_1:73533799-73533818 | None:intergenic | 35.0% | |
| !!! | GCTATCAGCATTTTTTTCTC+AGG | - | chr7_1:73533862-73533881 | None:intergenic | 35.0% |
| AGCATATTCTGATGCACATA+AGG | + | chr7_1:73533879-73533898 | Msa1037020:three_prime_UTR | 35.0% | |
| ! | CAGTTCGTTGACTACTTAAA+TGG | - | chr7_1:73534021-73534040 | None:intergenic | 35.0% |
| CTTGTTCTTATCCGTTCATT+TGG | + | chr7_1:73534064-73534083 | Msa1037020:three_prime_UTR | 35.0% | |
| !! | CTCGTTTTTCCTTCATAAGT+TGG | - | chr7_1:73534101-73534120 | None:intergenic | 35.0% |
| GAAGGAAAAACGAGATTACA+AGG | + | chr7_1:73534107-73534126 | Msa1037020:three_prime_UTR | 35.0% | |
| ATACATTACAACCCTGATGA+TGG | - | chr7_1:73534160-73534179 | None:intergenic | 35.0% | |
| CCCTGAAGTAATTAAACACA+AGG | + | chr7_1:73534181-73534200 | Msa1037020:three_prime_UTR | 35.0% | |
| CAAGATCAAAGTAATGGTTG+TGG | + | chr7_1:73534300-73534319 | Msa1037020:three_prime_UTR | 35.0% | |
| ATCAAAGTAATGGTTGTGGA+TGG | + | chr7_1:73534304-73534323 | Msa1037020:three_prime_UTR | 35.0% | |
| AGGAAGACTATTGTCTATGT+CGG | + | chr7_1:73534341-73534360 | Msa1037020:three_prime_UTR | 35.0% | |
| CCTCGTTTATGTCTCTTTAA+GGG | - | chr7_1:73534375-73534394 | None:intergenic | 35.0% | |
| ACCTCGTTTATGTCTCTTTA+AGG | - | chr7_1:73534376-73534395 | None:intergenic | 35.0% | |
| ! | GTAACTTTTCCAAGGTTAAC+TGG | - | chr7_1:73534433-73534452 | None:intergenic | 35.0% |
| ! | GCAATGCTTTTAGCAAATCT+TGG | - | chr7_1:73534455-73534474 | None:intergenic | 35.0% |
| AGCTGATATATTCGATAGAG+CGG | - | chr7_1:73534554-73534573 | None:intergenic | 35.0% | |
| GGTCAAATTGAACTAGTAGT+TGG | - | chr7_1:73534581-73534600 | None:intergenic | 35.0% | |
| ACGTGATTGTTACAGATTGT+AGG | - | chr7_1:73534602-73534621 | None:intergenic | 35.0% | |
| CGTCAAATTGTCTACAAGAT+AGG | + | chr7_1:73534619-73534638 | Msa1037020:three_prime_UTR | 35.0% | |
| AAATTGTCTACAAGATAGGC+TGG | + | chr7_1:73534623-73534642 | Msa1037020:three_prime_UTR | 35.0% | |
| !! | TTCAACTCAAGTTGGAGCAA+AGG | - | chr7_1:73531894-73531913 | None:intergenic | 40.0% |
| !! | TATTGAATGAGTGGTGGACA+AGG | - | chr7_1:73531944-73531963 | None:intergenic | 40.0% |
| GTGGCAAGTGGTTGATTATT+TGG | - | chr7_1:73532042-73532061 | None:intergenic | 40.0% | |
| AAGAGAATTGTAGTGGCAAG+TGG | - | chr7_1:73532054-73532073 | None:intergenic | 40.0% | |
| CAAGATCAGGTGATGAGAAT+TGG | - | chr7_1:73532165-73532184 | None:intergenic | 40.0% | |
| ATCACCTGATCTTGCTTCAA+GGG | + | chr7_1:73532171-73532190 | Msa1037020:five_prime_UTR | 40.0% | |
| GGACTCATCAGAATCTGAAA+AGG | + | chr7_1:73532192-73532211 | Msa1037020:five_prime_UTR | 40.0% | |
| ! | TTAGTGATGGAGAGAGGTAA+AGG | - | chr7_1:73532236-73532255 | None:intergenic | 40.0% |
| !! | TGGTTGATGATGATTGAGGA+TGG | - | chr7_1:73532372-73532391 | None:intergenic | 40.0% |
| GGATTCAGGATGAAGACTAT+GGG | - | chr7_1:73532493-73532512 | None:intergenic | 40.0% | |
| AGGATTCAGGATGAAGACTA+TGG | - | chr7_1:73532494-73532513 | None:intergenic | 40.0% | |
| CTTTCAAGATCAGCAATGGA+AGG | - | chr7_1:73532612-73532631 | None:intergenic | 40.0% | |
| AGTTCAATCTGAAGGGAACT+TGG | + | chr7_1:73532656-73532675 | Msa1037020:CDS | 40.0% | |
| GAAAGATGGAATGGTCTCAA+GGG | - | chr7_1:73532781-73532800 | None:intergenic | 40.0% | |
| AGAAAGATGGAATGGTCTCA+AGG | - | chr7_1:73532782-73532801 | None:intergenic | 40.0% | |
| AGTAGTGTGCTGAATAGTAC+TGG | + | chr7_1:73532873-73532892 | Msa1037020:CDS | 40.0% | |
| GGTGGTAAATGATGAAGTGA+AGG | + | chr7_1:73532905-73532924 | Msa1037020:CDS | 40.0% | |
| !! | TTTCAGGGTGAGTTTTGATG+AGG | + | chr7_1:73532935-73532954 | Msa1037020:CDS | 40.0% |
| ATGTATCTTGCAAAGGGACT+TGG | + | chr7_1:73532981-73533000 | Msa1037020:CDS | 40.0% | |
| AGGTGGTGATTATAGTTCCA+TGG | + | chr7_1:73533052-73533071 | Msa1037020:CDS | 40.0% | |
| GGTGGTGATTATAGTTCCAT+GGG | + | chr7_1:73533053-73533072 | Msa1037020:CDS | 40.0% | |
| GATTATAGTTCCATGGGTTC+TGG | + | chr7_1:73533059-73533078 | Msa1037020:CDS | 40.0% | |
| AAAATGGTTCAGCAAAACCC+TGG | + | chr7_1:73533128-73533147 | Msa1037020:CDS | 40.0% | |
| AAATGGTTCAGCAAAACCCT+GGG | + | chr7_1:73533129-73533148 | Msa1037020:CDS | 40.0% | |
| AATATTCCTCTGCTCCTTCA+CGG | - | chr7_1:73533437-73533456 | None:intergenic | 40.0% | |
| GTCATTTGGATCTGCTAGTA+TGG | - | chr7_1:73533469-73533488 | None:intergenic | 40.0% | |
| GAGAAGTTCTGTCACAGTAT+GGG | + | chr7_1:73533490-73533509 | Msa1037020:CDS | 40.0% | |
| TACTGCTCGTTCAAAATAGC+TGG | - | chr7_1:73533556-73533575 | None:intergenic | 40.0% | |
| GCAACTAAACAATGCTCTGA+TGG | + | chr7_1:73534218-73534237 | Msa1037020:three_prime_UTR | 40.0% | |
| ! | ACGCGTAGCTTACAAAGTTT+TGG | - | chr7_1:73534244-73534263 | None:intergenic | 40.0% |
| GTAATGGTTGTGGATGGTTT+AGG | + | chr7_1:73534310-73534329 | Msa1037020:three_prime_UTR | 40.0% | |
| CCCTTAAAGAGACATAAACG+AGG | + | chr7_1:73534372-73534391 | Msa1037020:three_prime_UTR | 40.0% | |
| ! | CCAAGGTTAACTGGCTTAAT+TGG | - | chr7_1:73534424-73534443 | None:intergenic | 40.0% |
| CCAATTAAGCCAGTTAACCT+TGG | + | chr7_1:73534421-73534440 | Msa1037020:three_prime_UTR | 40.0% | |
| TCCAGTACAACACAGAACTA+GGG | + | chr7_1:73534527-73534546 | Msa1037020:three_prime_UTR | 40.0% | |
| TCAGGTGATGAGAATTGGAC+AGG | - | chr7_1:73532160-73532179 | None:intergenic | 45.0% | |
| CATCACCTGATCTTGCTTCA+AGG | + | chr7_1:73532170-73532189 | Msa1037020:five_prime_UTR | 45.0% | |
| AGCTCTTCAACACCAGTTCT+TGG | + | chr7_1:73532414-73532433 | Msa1037020:CDS | 45.0% | |
| GATAGGAGAGAACCAAGAAC+TGG | - | chr7_1:73532429-73532448 | None:intergenic | 45.0% | |
| GGTTCTCTCCTATCTTCTTC+CGG | + | chr7_1:73532435-73532454 | Msa1037020:CDS | 45.0% | |
| TGAAGGAACCGGAAGAAGAT+AGG | - | chr7_1:73532446-73532465 | None:intergenic | 45.0% | |
| AGGACTATCTGTGAAGGAAC+CGG | - | chr7_1:73532457-73532476 | None:intergenic | 45.0% | |
| ! | ATGATGATGTTGGAGCGAAG+TGG | - | chr7_1:73532547-73532566 | None:intergenic | 45.0% |
| TCAGCAATGGAAGGAGAGAT+TGG | - | chr7_1:73532603-73532622 | None:intergenic | 45.0% | |
| !! | AGGGTGAGTTTTGATGAGGA+GGG | + | chr7_1:73532939-73532958 | Msa1037020:CDS | 45.0% |
| !! | GATGTGAGTGGTGATGGTAT+AGG | + | chr7_1:73533008-73533027 | Msa1037020:CDS | 45.0% |
| ! | TATAGTTCCATGGGTTCTGG+AGG | + | chr7_1:73533062-73533081 | Msa1037020:CDS | 45.0% |
| !! | ATAGTTCCATGGGTTCTGGA+GGG | + | chr7_1:73533063-73533082 | Msa1037020:CDS | 45.0% |
| TGGAGATAGTAATCATGGGG+TGG | + | chr7_1:73533091-73533110 | Msa1037020:CDS | 45.0% | |
| ! | TCAGAAACAATGGGTTCCCA+GGG | - | chr7_1:73533148-73533167 | None:intergenic | 45.0% |
| GACAGAACTTCTCCGTCATT+TGG | - | chr7_1:73533483-73533502 | None:intergenic | 45.0% | |
| GGAGAAGTTCTGTCACAGTA+TGG | + | chr7_1:73533489-73533508 | Msa1037020:CDS | 45.0% | |
| ! | ACAGTATGGGAAGCTGGTTT+GGG | + | chr7_1:73533503-73533522 | Msa1037020:CDS | 45.0% |
| TACAAGCTTCTCCTGATGAC+AGG | + | chr7_1:73533574-73533593 | Msa1037020:CDS | 45.0% | |
| CCAAAGGAAACTTGCATACG+CGG | - | chr7_1:73533728-73533747 | None:intergenic | 45.0% | |
| CGCGTATGCAAGTTTCCTTT+GGG | + | chr7_1:73533726-73533745 | Msa1037020:CDS | 45.0% | |
| !! | AAGTTTCCTTTGGGACACAG+AGG | + | chr7_1:73533735-73533754 | Msa1037020:CDS | 45.0% |
| ! | TTTGGAGCTATGGCAACTAC+AGG | + | chr7_1:73533811-73533830 | Msa1037020:CDS | 45.0% |
| GAGAACCAGAAATCACAAGC+CGG | + | chr7_1:73533932-73533951 | Msa1037020:three_prime_UTR | 45.0% | |
| AGAACCAGAAATCACAAGCC+GGG | + | chr7_1:73533933-73533952 | Msa1037020:three_prime_UTR | 45.0% | |
| CTCCAGTACAACACAGAACT+AGG | + | chr7_1:73534526-73534545 | Msa1037020:three_prime_UTR | 45.0% | |
| !! | TCCCTAGTTCTGTGTTGTAC+TGG | - | chr7_1:73534531-73534550 | None:intergenic | 45.0% |
| GAGTCCCTTGAAGCAAGATC+AGG | - | chr7_1:73532178-73532197 | None:intergenic | 50.0% | |
| TGATGTTGGAGCGAAGTGGT+TGG | - | chr7_1:73532543-73532562 | None:intergenic | 50.0% | |
| !! | GTGCTGAATAGTACTGGCAG+TGG | + | chr7_1:73532879-73532898 | Msa1037020:CDS | 50.0% |
| !! | GAATAGTACTGGCAGTGGTG+TGG | + | chr7_1:73532884-73532903 | Msa1037020:CDS | 50.0% |
| !! | CAGGGTGAGTTTTGATGAGG+AGG | + | chr7_1:73532938-73532957 | Msa1037020:CDS | 50.0% |
| !! | GAGTTTTGATGAGGAGGGAC+AGG | + | chr7_1:73532944-73532963 | Msa1037020:CDS | 50.0% |
| TTTGATGAGGAGGGACAGGT+TGG | + | chr7_1:73532948-73532967 | Msa1037020:CDS | 50.0% | |
| !! | GGACTTGGTGTTGATGTGAG+TGG | + | chr7_1:73532996-73533015 | Msa1037020:CDS | 50.0% |
| !! | GGTGTTGATGTGAGTGGTGA+TGG | + | chr7_1:73533002-73533021 | Msa1037020:CDS | 50.0% |
| !! | GTGAGTGGTGATGGTATAGG+TGG | + | chr7_1:73533011-73533030 | Msa1037020:CDS | 50.0% |
| ATCATTCCCTCCAGAACCCA+TGG | - | chr7_1:73533072-73533091 | None:intergenic | 50.0% | |
| !! | ATGGGTTCTGGAGGGAATGA+TGG | + | chr7_1:73533071-73533090 | Msa1037020:CDS | 50.0% |
| ! | CTCAGAAACAATGGGTTCCC+AGG | - | chr7_1:73533149-73533168 | None:intergenic | 50.0% |
| !! | CTGGGAACCCATTGTTTCTG+AGG | + | chr7_1:73533147-73533166 | Msa1037020:CDS | 50.0% |
| CAGTGCAAACAAGACCGTGA+AGG | + | chr7_1:73533420-73533439 | Msa1037020:intron | 50.0% | |
| TGGATCTGCTAGTATGGCTC+TGG | - | chr7_1:73533463-73533482 | None:intergenic | 50.0% | |
| TCTGTCACAGTATGGGAAGC+TGG | + | chr7_1:73533497-73533516 | Msa1037020:CDS | 50.0% | |
| CACAGTATGGGAAGCTGGTT+TGG | + | chr7_1:73533502-73533521 | Msa1037020:CDS | 50.0% | |
| CCGCGTATGCAAGTTTCCTT+TGG | + | chr7_1:73533725-73533744 | Msa1037020:CDS | 50.0% | |
| ! | GAAACCCGGCTTGTGATTTC+TGG | - | chr7_1:73533940-73533959 | None:intergenic | 50.0% |
| ! | GGATGGTTTAGGATCAGAGC+AGG | + | chr7_1:73534321-73534340 | Msa1037020:three_prime_UTR | 50.0% |
| TGTTGGAGCGAAGTGGTTGG+TGG | - | chr7_1:73532540-73532559 | None:intergenic | 55.0% | |
| !! | TAGTACTGGCAGTGGTGTGG+TGG | + | chr7_1:73532887-73532906 | Msa1037020:CDS | 55.0% |
| GATGGTATAGGTGGCTGCAG+AGG | + | chr7_1:73533020-73533039 | Msa1037020:CDS | 55.0% | |
| GTATAGGTGGCTGCAGAGGA+GGG | + | chr7_1:73533024-73533043 | Msa1037020:CDS | 55.0% | |
| ACAAGACCGTGAAGGAGCAG+AGG | + | chr7_1:73533428-73533447 | Msa1037020:CDS | 55.0% | |
| CGTCTTCCTCTGTGTCCCAA+AGG | - | chr7_1:73533744-73533763 | None:intergenic | 55.0% | |
| TTGGGACACAGAGGAAGACG+AGG | + | chr7_1:73533744-73533763 | Msa1037020:CDS | 55.0% | |
| ACAGAGGAAGACGAGGATGC+AGG | + | chr7_1:73533751-73533770 | Msa1037020:CDS | 55.0% | |
| CCGACACTGCAACAGAAACC+CGG | - | chr7_1:73533954-73533973 | None:intergenic | 55.0% | |
| CCGGGTTTCTGTTGCAGTGT+CGG | + | chr7_1:73533951-73533970 | Msa1037020:three_prime_UTR | 55.0% | |
| !! | TGGAGCGAAGTGGTTGGTGG+TGG | - | chr7_1:73532537-73532556 | None:intergenic | 60.0% |
| GGTATAGGTGGCTGCAGAGG+AGG | + | chr7_1:73533023-73533042 | Msa1037020:CDS | 60.0% | |
| TGCAGAGGAGGGAATGGAGG+TGG | + | chr7_1:73533035-73533054 | Msa1037020:CDS | 60.0% | |
| GGTGGCTGCAGAGGAGGGAA+TGG | + | chr7_1:73533029-73533048 | Msa1037020:CDS | 65.0% | |
| GGCTGCAGAGGAGGGAATGG+AGG | + | chr7_1:73533032-73533051 | Msa1037020:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 73531881 | 73534742 | 73531881 | ID=Msa1037020;Name=Msa1037020 |
| chr7_1 | mRNA | 73531881 | 73534742 | 73531881 | ID=Msa1037020-mRNA-1;Parent=Msa1037020;Name=Msa1037020-mRNA-1;_AED=0.00;_eAED=0.00;_QI=420|1|1|1|0.66|0.5|4|902|363 |
| chr7_1 | exon | 73531881 | 73532214 | 73531881 | ID=Msa1037020-mRNA-1:exon:18116;Parent=Msa1037020-mRNA-1 |
| chr7_1 | exon | 73532316 | 73533193 | 73532316 | ID=Msa1037020-mRNA-1:exon:18117;Parent=Msa1037020-mRNA-1 |
| chr7_1 | exon | 73533423 | 73533595 | 73533423 | ID=Msa1037020-mRNA-1:exon:18118;Parent=Msa1037020-mRNA-1 |
| chr7_1 | exon | 73533714 | 73534742 | 73533714 | ID=Msa1037020-mRNA-1:exon:18119;Parent=Msa1037020-mRNA-1 |
| chr7_1 | five_prime_UTR | 73531881 | 73532214 | 73531881 | ID=Msa1037020-mRNA-1:five_prime_utr;Parent=Msa1037020-mRNA-1 |
| chr7_1 | five_prime_UTR | 73532316 | 73532401 | 73532316 | ID=Msa1037020-mRNA-1:five_prime_utr;Parent=Msa1037020-mRNA-1 |
| chr7_1 | CDS | 73532402 | 73533193 | 73532402 | ID=Msa1037020-mRNA-1:cds;Parent=Msa1037020-mRNA-1 |
| chr7_1 | CDS | 73533423 | 73533595 | 73533423 | ID=Msa1037020-mRNA-1:cds;Parent=Msa1037020-mRNA-1 |
| chr7_1 | CDS | 73533714 | 73533840 | 73533714 | ID=Msa1037020-mRNA-1:cds;Parent=Msa1037020-mRNA-1 |
| chr7_1 | three_prime_UTR | 73533841 | 73534742 | 73533841 | ID=Msa1037020-mRNA-1:three_prime_utr;Parent=Msa1037020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
