Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0672760 | XP_013455198.1 | 99.206 | 378 | 3 | 0 | 1 | 378 | 1 | 378 | 0.0 | 775 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0672760 | sp|Q3E875|RGAPX_ARATH | 71.164 | 378 | 107 | 1 | 1 | 378 | 1 | 376 | 0.0 | 557 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0672760 | A0A072UHJ4 | 99.206 | 378 | 3 | 0 | 1 | 378 | 1 | 378 | 0.0 | 775 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012200 | Msa0672760 | 0.804982 | 1.663167e-49 | -8.615850e-47 |
| Msa0026630 | Msa0672760 | 0.802345 | 5.862503e-49 | -8.615850e-47 |
| Msa0032080 | Msa0672760 | 0.891309 | 4.468869e-74 | -8.615850e-47 |
| Msa0032100 | Msa0672760 | 0.854892 | 9.094853e-62 | -8.615850e-47 |
| Msa0043980 | Msa0672760 | 0.809552 | 1.788057e-50 | -8.615850e-47 |
| Msa0045790 | Msa0672760 | 0.811665 | 6.250426e-51 | -8.615850e-47 |
| Msa0046160 | Msa0672760 | 0.814320 | 1.636387e-51 | -8.615850e-47 |
| Msa0079070 | Msa0672760 | 0.811437 | 7.005734e-51 | -8.615850e-47 |
| Msa0079370 | Msa0672760 | 0.833783 | 4.373000e-56 | -8.615850e-47 |
| Msa0079390 | Msa0672760 | 0.810138 | 1.337777e-50 | -8.615850e-47 |
| Msa0623070 | Msa0672760 | 0.812483 | 4.144111e-51 | -8.615850e-47 |
| Msa0641130 | Msa0672760 | 0.829197 | 5.891389e-55 | -8.615850e-47 |
| Msa0672760 | Msa0763890 | 0.801047 | 1.082370e-48 | -8.615850e-47 |
| Msa0672760 | Msa0763920 | 0.803235 | 3.840268e-49 | -8.615850e-47 |
| Msa0672760 | Msa0784480 | 0.804206 | 2.414304e-49 | -8.615850e-47 |
| Msa0672760 | Msa0818060 | 0.827086 | 1.899249e-54 | -8.615850e-47 |
| Msa0672760 | Msa0830230 | 0.811485 | 6.836967e-51 | -8.615850e-47 |
| Msa0672760 | Msa0831850 | 0.810021 | 1.417811e-50 | -8.615850e-47 |
| Msa0672760 | Msa0888260 | 0.846332 | 2.321392e-59 | -8.615850e-47 |
| Msa0672760 | Msa0894710 | 0.803864 | 2.843643e-49 | -8.615850e-47 |
| Msa0672760 | Msa0899970 | 0.806720 | 7.171649e-50 | -8.615850e-47 |
| Msa0672760 | Msa0915610 | 0.807297 | 5.414559e-50 | -8.615850e-47 |
| Msa0672760 | Msa0936060 | 0.801131 | 1.040440e-48 | -8.615850e-47 |
| Msa0672760 | Msa0943970 | 0.800680 | 1.286690e-48 | -8.615850e-47 |
| Msa0672760 | Msa0965080 | 0.812394 | 4.334802e-51 | -8.615850e-47 |
| Msa0672760 | Msa0965290 | 0.822294 | 2.557840e-53 | -8.615850e-47 |
| Msa0672760 | Msa0999680 | 0.823673 | 1.220304e-53 | -8.615850e-47 |
| Msa0672760 | Msa1063400 | 0.821766 | 3.391469e-53 | -8.615850e-47 |
| Msa0672760 | Msa1075650 | 0.816381 | 5.694091e-52 | -8.615850e-47 |
| Msa0672760 | Msa1107260 | 0.816949 | 4.246847e-52 | -8.615850e-47 |
| Msa0672760 | Msa1122150 | 0.861062 | 1.335802e-63 | -8.615850e-47 |
| Msa0672760 | Msa1129550 | 0.804131 | 2.503349e-49 | -8.615850e-47 |
| Msa0672760 | Msa1129730 | 0.809071 | 2.267581e-50 | -8.615850e-47 |
| Msa0672760 | Msa1138550 | 0.807859 | 4.113655e-50 | -8.615850e-47 |
| Msa0672760 | Msa1140630 | 0.815847 | 7.494154e-52 | -8.615850e-47 |
| Msa0672760 | Msa1150900 | 0.809405 | 1.922852e-50 | -8.615850e-47 |
| Msa0672760 | Msa1160560 | 0.870045 | 1.961997e-66 | -8.615850e-47 |
| Msa0672760 | Msa1185620 | 0.830140 | 3.472544e-55 | -8.615850e-47 |
| Msa0672760 | Msa1212050 | 0.804237 | 2.378662e-49 | -8.615850e-47 |
| Msa0672760 | Msa1235390 | 0.800736 | 1.252997e-48 | -8.615850e-47 |
| Msa0672760 | Msa1238330 | 0.814241 | 1.703134e-51 | -8.615850e-47 |
| Msa0672760 | Msa1239620 | 0.826257 | 2.995427e-54 | -8.615850e-47 |
| Msa0672760 | Msa1257750 | 0.802432 | 5.626611e-49 | -8.615850e-47 |
| Msa0672760 | Msa1291450 | 0.813255 | 2.807908e-51 | -8.615850e-47 |
| Msa0672760 | Msa1305350 | 0.804924 | 1.710204e-49 | -8.615850e-47 |
| Msa0672760 | Msa1329200 | 0.825568 | 4.365600e-54 | -8.615850e-47 |
| Msa0672760 | Msa1331000 | 0.808006 | 3.828558e-50 | -8.615850e-47 |
| Msa0672760 | Msa1355180 | 0.817220 | 3.691891e-52 | -8.615850e-47 |
| Msa0672760 | Msa1355890 | 0.816122 | 6.508570e-52 | -8.615850e-47 |
| Msa0672760 | Msa1390020 | 0.995237 | 2.641144e-214 | -8.615850e-47 |
| Msa0672760 | Msa1394380 | 0.803696 | 3.081681e-49 | -8.615850e-47 |
| Msa0672760 | Msa1419840 | 0.837727 | 4.383570e-57 | -8.615850e-47 |
| Msa0672760 | Msa1427230 | 0.800125 | 1.668740e-48 | -8.615850e-47 |
| Msa0672760 | Msa1436480 | 0.801274 | 9.727548e-49 | -8.615850e-47 |
| Msa0672760 | Msa1442920 | 0.818920 | 1.523450e-52 | -8.615850e-47 |
| Msa0672760 | Msa1458680 | 0.814553 | 1.453321e-51 | -8.615850e-47 |
| Msa0124320 | Msa0672760 | 0.810461 | 1.139804e-50 | -8.615850e-47 |
| Msa0138020 | Msa0672760 | 0.825623 | 4.237176e-54 | -8.615850e-47 |
| Msa0172080 | Msa0672760 | 0.863554 | 2.291159e-64 | -8.615850e-47 |
| Msa0189030 | Msa0672760 | 0.813230 | 2.843405e-51 | -8.615850e-47 |
| Msa0189110 | Msa0672760 | 0.800246 | 1.576690e-48 | -8.615850e-47 |
| Msa0200850 | Msa0672760 | 0.849423 | 3.264651e-60 | -8.615850e-47 |
| Msa0206010 | Msa0672760 | 0.818585 | 1.815064e-52 | -8.615850e-47 |
| Msa0218370 | Msa0672760 | 0.849778 | 2.598530e-60 | -8.615850e-47 |
| Msa0219590 | Msa0672760 | 0.814488 | 1.501664e-51 | -8.615850e-47 |
| Msa0231240 | Msa0672760 | 0.810531 | 1.100519e-50 | -8.615850e-47 |
| Msa0236420 | Msa0672760 | 0.818482 | 1.915616e-52 | -8.615850e-47 |
| Msa0371950 | Msa0672760 | 0.804078 | 2.567592e-49 | -8.615850e-47 |
| Msa0388730 | Msa0672760 | 0.803132 | 4.033973e-49 | -8.615850e-47 |
| Msa0411390 | Msa0672760 | 0.815309 | 9.875442e-52 | -8.615850e-47 |
| Msa0417330 | Msa0672760 | 0.801812 | 7.546703e-49 | -8.615850e-47 |
| Msa0422490 | Msa0672760 | 0.807170 | 5.762042e-50 | -8.615850e-47 |
| Msa0434540 | Msa0672760 | 0.833176 | 6.197747e-56 | -8.615850e-47 |
| Msa0455760 | Msa0672760 | 0.846786 | 1.745286e-59 | -8.615850e-47 |
| Msa0475600 | Msa0672760 | 0.813589 | 2.371118e-51 | -8.615850e-47 |
| Msa0243480 | Msa0672760 | 0.863141 | 3.076118e-64 | -8.615850e-47 |
| Msa0270960 | Msa0672760 | 0.823647 | 1.237580e-53 | -8.615850e-47 |
| Msa0271550 | Msa0672760 | 0.813171 | 2.929756e-51 | -8.615850e-47 |
| Msa0281930 | Msa0672760 | 0.865006 | 8.072154e-65 | -8.615850e-47 |
| Msa0287410 | Msa0672760 | 0.810438 | 1.152577e-50 | -8.615850e-47 |
| Msa0287870 | Msa0672760 | 0.818768 | 1.649864e-52 | -8.615850e-47 |
| Msa0299660 | Msa0672760 | 0.801018 | 1.097228e-48 | -8.615850e-47 |
| Msa0306610 | Msa0672760 | 0.802536 | 5.354910e-49 | -8.615850e-47 |
| Msa0309270 | Msa0672760 | 0.812863 | 3.422089e-51 | -8.615850e-47 |
| Msa0319290 | Msa0672760 | 0.805020 | 1.633182e-49 | -8.615850e-47 |
| Msa0321080 | Msa0672760 | 0.850538 | 1.591992e-60 | -8.615850e-47 |
| Msa0323370 | Msa0672760 | 0.807571 | 4.735769e-50 | -8.615850e-47 |
| Msa0326110 | Msa0672760 | 0.815345 | 9.696904e-52 | -8.615850e-47 |
| Msa0363790 | Msa0672760 | 0.848332 | 6.555444e-60 | -8.615850e-47 |
| Msa0486690 | Msa0672760 | 0.801872 | 7.334036e-49 | -8.615850e-47 |
| Msa0521010 | Msa0672760 | 0.803032 | 4.229709e-49 | -8.615850e-47 |
| Msa0538670 | Msa0672760 | 0.943390 | 1.312206e-102 | -8.615850e-47 |
| Msa0545050 | Msa0672760 | 0.823807 | 1.135224e-53 | -8.615850e-47 |
| Msa0594560 | Msa0672760 | 0.844669 | 6.551952e-59 | -8.615850e-47 |
| Msa0600590 | Msa0672760 | 0.816207 | 6.229592e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0672760 | MtrunA17_Chr4g0013351 | 99.206 | 378 | 3 | 0 | 1 | 378 | 1 | 378 | 0.0 | 775 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0672760 | AT5G61530.1 | 71.164 | 378 | 107 | 1 | 1 | 378 | 1 | 376 | 0.0 | 557 |
| Msa0672760 | AT5G61530.5 | 69.048 | 378 | 106 | 2 | 1 | 378 | 1 | 367 | 0.0 | 535 |
| Msa0672760 | AT5G61530.2 | 69.048 | 378 | 106 | 2 | 1 | 378 | 1 | 367 | 0.0 | 535 |
| Msa0672760 | AT5G61530.3 | 70.950 | 358 | 102 | 1 | 21 | 378 | 21 | 376 | 0.0 | 522 |
| Msa0672760 | AT5G61530.4 | 73.285 | 277 | 74 | 0 | 1 | 277 | 1 | 277 | 8.95e-150 | 424 |
Find 115 sgRNAs with CRISPR-Local
Find 399 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTTGGATATATTGGATT+TGG | 0.230100 | 4_4:+18140944 | Msa0672760:three_prime_UTR |
| TCGAAATACCTTGGTTGTAT+AGG | 0.242849 | 4_4:-18137698 | None:intergenic |
| GCAGATTACCTTATAGTTTC+AGG | 0.250957 | 4_4:+18137499 | Msa0672760:CDS |
| CAGTATTGACGATAAATTTC+AGG | 0.256557 | 4_4:-18139681 | None:intergenic |
| CAAATCCAATATATCCAAAT+TGG | 0.269962 | 4_4:-18140943 | None:intergenic |
| TGCATCTTCTCTTATTCCTT+TGG | 0.272162 | 4_4:+18140750 | Msa0672760:CDS |
| AAGTCGGTGGGCACGTCTTC+AGG | 0.278314 | 4_4:+18136685 | Msa0672760:CDS |
| CGAAATACCTTGGTTGTATA+GGG | 0.288605 | 4_4:-18137697 | None:intergenic |
| GATATACCTTTCACTAAAAC+TGG | 0.308224 | 4_4:-18141046 | None:intergenic |
| TAAATCTGAAGGGGACAAAA+AGG | 0.312157 | 4_4:+18137656 | Msa0672760:CDS |
| CAAGTAGTTGAACCAGGTTC+TGG | 0.316941 | 4_4:-18139744 | None:intergenic |
| AAGAAGAGTTTAGAGAGATA+TGG | 0.324615 | 4_4:-18135171 | None:intergenic |
| ATTCTTTGACTTGGATGTAT+TGG | 0.329262 | 4_4:+18140903 | Msa0672760:three_prime_UTR |
| TCAGAAGTCACTTCTCAATA+AGG | 0.338907 | 4_4:+18138022 | Msa0672760:CDS |
| TGACTTGGATGTATTGGATT+TGG | 0.341216 | 4_4:+18140909 | Msa0672760:three_prime_UTR |
| CTGAAATTTATCGTCAATAC+TGG | 0.352388 | 4_4:+18139682 | Msa0672760:CDS |
| AAAAGCTACCTGAAACTATA+AGG | 0.355497 | 4_4:-18137507 | None:intergenic |
| ACAAGAGCTGCTACATCAAC+TGG | 0.363894 | 4_4:-18137831 | None:intergenic |
| GAGAGATATGGATTGAGAAT+AGG | 0.364756 | 4_4:-18135159 | None:intergenic |
| TCCAATGTGGTCAGTGGCTC+AGG | 0.371441 | 4_4:-18137876 | None:intergenic |
| CAGAACCTGGTTCAACTACT+TGG | 0.372001 | 4_4:+18139745 | Msa0672760:CDS |
| TCAACTGGATTTGAGCCTTC+TGG | 0.372040 | 4_4:-18137816 | None:intergenic |
| TTCTGGATTCAAGCTCTGTT+TGG | 0.372743 | 4_4:-18139727 | None:intergenic |
| CCTTTATTGATTCTTTGACT+TGG | 0.375766 | 4_4:+18140894 | Msa0672760:three_prime_UTR |
| GAATCAGCGGGAACGTTTGT+TGG | 0.388056 | 4_4:+18136596 | Msa0672760:CDS |
| CCACATTACCTCTTCAACCT+TGG | 0.389178 | 4_4:-18136822 | None:intergenic |
| TCTCTTATTCCTTTGGATGA+AGG | 0.409750 | 4_4:+18140757 | Msa0672760:CDS |
| ACCTGTTATCATGTGGCAAA+AGG | 0.410592 | 4_4:+18139650 | Msa0672760:CDS |
| TTGACTAGTATCTGAGGAAT+AGG | 0.414328 | 4_4:-18137472 | None:intergenic |
| GACAAAAGAGAAGGTGGTTG+TGG | 0.420557 | 4_4:+18136793 | Msa0672760:CDS |
| CCATGAGAAACATACTTAAG+AGG | 0.422179 | 4_4:+18137940 | Msa0672760:CDS |
| CCAAGTCAAAGAATCAATAA+AGG | 0.427250 | 4_4:-18140894 | None:intergenic |
| GCTGAAGTGGCGGGAAAAGT+TGG | 0.432879 | 4_4:+18136650 | Msa0672760:CDS |
| TATAGCAGCTATGTTTATGC+TGG | 0.434797 | 4_4:+18141002 | Msa0672760:three_prime_UTR |
| ACTTTGTTCAGATGGATTCT+CGG | 0.437283 | 4_4:+18139607 | Msa0672760:intron |
| TTCCTGAGGAGAGGTTTGTC+AGG | 0.437700 | 4_4:+18136770 | Msa0672760:CDS |
| ACAAAAGAGAAGGTGGTTGT+GGG | 0.439320 | 4_4:+18136794 | Msa0672760:CDS |
| TCGATTGCACCGAAGTCAAC+TGG | 0.452453 | 4_4:-18140784 | None:intergenic |
| CCTCTTAAGTATGTTTCTCA+TGG | 0.456228 | 4_4:-18137940 | None:intergenic |
| TCGGAGCCTTGCAATGGAAA+TGG | 0.458451 | 4_4:+18139626 | Msa0672760:CDS |
| CTGAAGTGGCGGGAAAAGTT+GGG | 0.470673 | 4_4:+18136651 | Msa0672760:CDS |
| CTCTGTACAGTAATCTCAAT+CGG | 0.472832 | 4_4:-18137433 | None:intergenic |
| AATGATCGTCACGTCCAGAT+TGG | 0.476710 | 4_4:-18140978 | None:intergenic |
| TGTACAGGATCGAATGATAT+CGG | 0.477600 | 4_4:+18136727 | Msa0672760:CDS |
| TGGGGAAACATGTTGGGTAC+TGG | 0.483946 | 4_4:+18141022 | Msa0672760:three_prime_UTR |
| CTATACCTTGTTCGATTCAG+TGG | 0.487225 | 4_4:-18135232 | None:intergenic |
| GTTTCTCATGGAATATATGT+TGG | 0.487803 | 4_4:-18137928 | None:intergenic |
| CTCACCTCAGTGGCAAGATA+AGG | 0.488288 | 4_4:+18136439 | Msa0672760:CDS |
| CAGATGCCAACGAGACAGTC+TGG | 0.491595 | 4_4:+18140848 | Msa0672760:CDS |
| ATAGCAGCTATGTTTATGCT+GGG | 0.496784 | 4_4:+18141003 | Msa0672760:three_prime_UTR |
| CCTGTTATCATGTGGCAAAA+GGG | 0.504737 | 4_4:+18139651 | Msa0672760:CDS |
| AGACATTGAAAGATGGCAAA+AGG | 0.507271 | 4_4:+18137033 | Msa0672760:CDS |
| GGATTCAAGCTCTGTTTGGA+AGG | 0.507953 | 4_4:-18139723 | None:intergenic |
| AGCGGGAACGTTTGTTGGCG+AGG | 0.509352 | 4_4:+18136601 | Msa0672760:CDS |
| TCCCTGACAAACCTCTCCTC+AGG | 0.510117 | 4_4:-18136772 | None:intergenic |
| GTCTACAAGACATGCTGTAC+AGG | 0.511268 | 4_4:+18136712 | Msa0672760:CDS |
| ATATCGGCTGCTGCTACGAC+TGG | 0.522526 | 4_4:+18136743 | Msa0672760:CDS |
| GGTCAAGCTTAAAGAAGCTA+AGG | 0.542829 | 4_4:+18136574 | Msa0672760:CDS |
| TCATTTCCAGACTGTCTCGT+TGG | 0.544319 | 4_4:-18140854 | None:intergenic |
| TTATGCTGGGGAAACATGTT+GGG | 0.545272 | 4_4:+18141016 | Msa0672760:three_prime_UTR |
| AAGTAACAACAAAATTATAA+CGG | 0.546617 | 4_4:-18135106 | None:intergenic |
| TCATGATTGCATATATATGA+AGG | 0.549002 | 4_4:+18141248 | Msa0672760:three_prime_UTR |
| CAGCGTGAACTATATGACTC+TGG | 0.554197 | 4_4:+18137968 | Msa0672760:CDS |
| CAGAGCTTGAATCCAGAACC+TGG | 0.554738 | 4_4:+18139732 | Msa0672760:CDS |
| CTCTTCCACTGAATCGAACA+AGG | 0.558633 | 4_4:+18135227 | Msa0672760:five_prime_UTR |
| AATAAGAGAAGATGCATCCA+TGG | 0.561442 | 4_4:-18140743 | None:intergenic |
| ACTACTTGGGACATGCTCGC+TGG | 0.561653 | 4_4:+18139759 | Msa0672760:CDS |
| GAGCTTTATAATGAGATCAA+AGG | 0.565606 | 4_4:+18137897 | Msa0672760:CDS |
| AAAGAGTAATGTAGCTGAAG+TGG | 0.566162 | 4_4:+18136637 | Msa0672760:CDS |
| TTTATGCTGGGGAAACATGT+TGG | 0.566531 | 4_4:+18141015 | Msa0672760:three_prime_UTR |
| TCAACTGCTGCAGTGCCAGA+AGG | 0.567311 | 4_4:+18137801 | Msa0672760:CDS |
| CAAAAGAGAAGGTGGTTGTG+GGG | 0.567728 | 4_4:+18136795 | Msa0672760:CDS |
| CAGGTGCCATTTCCATTGCA+AGG | 0.570190 | 4_4:-18139632 | None:intergenic |
| AAAGAAGCTAAGGAATCAGC+GGG | 0.570777 | 4_4:+18136584 | Msa0672760:CDS |
| ACTGGCATGCCTTCATCCAA+AGG | 0.571508 | 4_4:-18140766 | None:intergenic |
| TCCTGAGCCACTGACCACAT+TGG | 0.580818 | 4_4:+18137875 | Msa0672760:CDS |
| GGATTCTCGGAGCCTTGCAA+TGG | 0.586088 | 4_4:+18139620 | Msa0672760:CDS |
| CAGGGAGTTGCTAAAACTGA+CGG | 0.591352 | 4_4:+18137140 | Msa0672760:intron |
| AGAACCTGGTTCAACTACTT+GGG | 0.591658 | 4_4:+18139746 | Msa0672760:CDS |
| AGTAATGTAGCTGAAGTGGC+GGG | 0.592358 | 4_4:+18136641 | Msa0672760:CDS |
| GAAGGCATGCCAGTTGACTT+CGG | 0.597065 | 4_4:+18140775 | Msa0672760:CDS |
| TCCTGAGGAGAGGTTTGTCA+GGG | 0.599140 | 4_4:+18136771 | Msa0672760:CDS |
| TCTTGACAGACATTGAAAGA+TGG | 0.604203 | 4_4:+18137026 | Msa0672760:CDS |
| GTCAGGGACAAAAGAGAAGG+TGG | 0.606025 | 4_4:+18136787 | Msa0672760:CDS |
| CACTGAGGTGAGATAACAGA+AGG | 0.606186 | 4_4:-18136428 | None:intergenic |
| GGACGGTATTCAAAAGTCGG+TGG | 0.609947 | 4_4:+18136672 | Msa0672760:CDS |
| TTAGTGATGAGAGTTTCTGC+AGG | 0.619157 | 4_4:-18141150 | None:intergenic |
| CTACGACTGGTGCATTCCTG+AGG | 0.619975 | 4_4:+18136756 | Msa0672760:CDS |
| GGTGGTTGTGGGGAAATCCA+AGG | 0.621706 | 4_4:+18136805 | Msa0672760:CDS |
| TAAAGCTCCAATGTGGTCAG+TGG | 0.623875 | 4_4:-18137882 | None:intergenic |
| TTGGGACGGTATTCAAAAGT+CGG | 0.624690 | 4_4:+18136669 | Msa0672760:CDS |
| GACGGTATTCAAAAGTCGGT+GGG | 0.626060 | 4_4:+18136673 | Msa0672760:CDS |
| GAGTAATGTAGCTGAAGTGG+CGG | 0.626295 | 4_4:+18136640 | Msa0672760:CDS |
| ATGTCCCAAGTAGTTGAACC+AGG | 0.630070 | 4_4:-18139750 | None:intergenic |
| GGGGAAATCCAAGGTTGAAG+AGG | 0.631245 | 4_4:+18136814 | Msa0672760:CDS |
| GCACAATTGACTAGTATCTG+AGG | 0.633991 | 4_4:-18137478 | None:intergenic |
| ACTGGTGCATTCCTGAGGAG+AGG | 0.636539 | 4_4:+18136761 | Msa0672760:CDS |
| TGCAGACGAGAGTGAAGCCA+TGG | 0.637614 | 4_4:+18140726 | Msa0672760:intron |
| TGTACAGCATGTCTTGTAGA+CGG | 0.639114 | 4_4:-18136710 | None:intergenic |
| CAGAGTCATATAGTTCACGC+TGG | 0.642929 | 4_4:-18137967 | None:intergenic |
| TTTGTCAGGGACAAAAGAGA+AGG | 0.643608 | 4_4:+18136784 | Msa0672760:CDS |
| ATGTGGTCAGTGGCTCAGGA+AGG | 0.645915 | 4_4:-18137872 | None:intergenic |
| TAAAGAAGCTAAGGAATCAG+CGG | 0.649713 | 4_4:+18136583 | Msa0672760:CDS |
| GTTTGTTGGCGAGGTCACAA+AGG | 0.656145 | 4_4:+18136610 | Msa0672760:CDS |
| CTCGCCTTATCTTGCCACTG+AGG | 0.661591 | 4_4:-18136443 | None:intergenic |
| TAGCAGCTATGTTTATGCTG+GGG | 0.665487 | 4_4:+18141004 | Msa0672760:three_prime_UTR |
| CGATTGAGATTACTGTACAG+AGG | 0.667858 | 4_4:+18137434 | Msa0672760:CDS |
| CAGTGGCAAGATAAGGCGAG+TGG | 0.672268 | 4_4:+18136446 | Msa0672760:CDS |
| ACTAGCACGGAGCAAAAGTG+CGG | 0.688718 | 4_4:-18138000 | None:intergenic |
| AGTGGCGGGAAAAGTTGGGA+CGG | 0.689419 | 4_4:+18136655 | Msa0672760:CDS |
| GAAGTGACTTCTGACTAGCA+CGG | 0.698389 | 4_4:-18138013 | None:intergenic |
| CTCATTATAAAGCTCCAATG+TGG | 0.698623 | 4_4:-18137889 | None:intergenic |
| TTGGTTGCCCTATACAACCA+AGG | 0.705842 | 4_4:+18137690 | Msa0672760:CDS |
| CTTCTGTTATCTCACCTCAG+TGG | 0.723347 | 4_4:+18136429 | Msa0672760:CDS |
| AAATGGCACCTGTTATCATG+TGG | 0.743338 | 4_4:+18139643 | Msa0672760:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATAGTTTTTTTTTTTTAT+CGG | + | chr4_4:18135249-18135268 | Msa0672760:intron | 10.0% |
| !! | TAACTTAAATGAAAATAATT+TGG | + | chr4_4:18135927-18135946 | Msa0672760:intron | 10.0% |
| !! | TATAAAATTCGTAAAATAAA+AGG | - | chr4_4:18136242-18136261 | None:intergenic | 10.0% |
| !! | TATATATAAATTTAATGTAG+GGG | + | chr4_4:18136553-18136572 | Msa0672760:intron | 10.0% |
| !! | TACTATTTAATAAATTTGTA+TGG | + | chr4_4:18138126-18138145 | Msa0672760:intron | 10.0% |
| !! | AATTATAAAAATTCAAAAGT+GGG | + | chr4_4:18140239-18140258 | Msa0672760:intron | 10.0% |
| !! | AAGTAACAACAAAATTATAA+CGG | - | chr4_4:18135109-18135128 | None:intergenic | 15.0% |
| !!! | TATTGATTAATTAGAGATTA+TGG | + | chr4_4:18135506-18135525 | Msa0672760:intron | 15.0% |
| !! | ATTAAATAGTTTATTTGAAC+AGG | + | chr4_4:18136030-18136049 | Msa0672760:intron | 15.0% |
| !! | ATTATATCATTAAAGTTAGA+CGG | + | chr4_4:18137743-18137762 | Msa0672760:intron | 15.0% |
| !! | TATTTAATAAATTTGTATGG+TGG | + | chr4_4:18138129-18138148 | Msa0672760:intron | 15.0% |
| !!! | AGTAATTAATTTTTTTTGGT+TGG | + | chr4_4:18138213-18138232 | Msa0672760:intron | 15.0% |
| !! | AATCAAACAACAAAATAATA+AGG | - | chr4_4:18138722-18138741 | None:intergenic | 15.0% |
| !! | TTACATAAAATTCATTATGT+AGG | + | chr4_4:18139813-18139832 | Msa0672760:intron | 15.0% |
| !!! | TCTTTTAAATGTTTTCTATT+GGG | - | chr4_4:18140049-18140068 | None:intergenic | 15.0% |
| !! | CAATTATAAAAATTCAAAAG+TGG | + | chr4_4:18140238-18140257 | Msa0672760:intron | 15.0% |
| !! | AAACAAGAAAATAAGATATA+TGG | - | chr4_4:18140700-18140719 | None:intergenic | 15.0% |
| !!! | TTCACGTAGAATATTTTTTA+TGG | + | chr4_4:18135367-18135386 | Msa0672760:intron | 20.0% |
| !!! | TAGAATATTTTTTATGGTCA+AGG | + | chr4_4:18135373-18135392 | Msa0672760:intron | 20.0% |
| !! | TTAGTTATCAATTATCATGA+AGG | - | chr4_4:18135483-18135502 | None:intergenic | 20.0% |
| !! | AAATATAATTAGTGCTAACT+TGG | - | chr4_4:18136898-18136917 | None:intergenic | 20.0% |
| !!! | CATTTTTTCTTTGTTTTAGT+TGG | + | chr4_4:18136948-18136967 | Msa0672760:intron | 20.0% |
| !!! | TTTTTTAGAATGATCTATAC+TGG | - | chr4_4:18137095-18137114 | None:intergenic | 20.0% |
| !!! | CATATCTTTTTAAATCTGAA+GGG | + | chr4_4:18137646-18137665 | Msa0672760:CDS | 20.0% |
| !!! | ATATCTTTTTAAATCTGAAG+GGG | + | chr4_4:18137647-18137666 | Msa0672760:CDS | 20.0% |
| !!! | TAATTACTTAATTGCGTTTT+AGG | - | chr4_4:18138201-18138220 | None:intergenic | 20.0% |
| !!! | ATTCAATTTACTTTTGACAT+GGG | - | chr4_4:18138253-18138272 | None:intergenic | 20.0% |
| !!! | TCTATGTTTCTTTTTTTGTT+TGG | + | chr4_4:18138272-18138291 | Msa0672760:intron | 20.0% |
| !!! | TTGATTTGTTTTCATATGTT+AGG | + | chr4_4:18138338-18138357 | Msa0672760:intron | 20.0% |
| !! | TTTAACAAAATTGGATTTGA+CGG | + | chr4_4:18138368-18138387 | Msa0672760:intron | 20.0% |
| !! | AGAAAATTAAGTCTACAAAA+CGG | - | chr4_4:18138408-18138427 | None:intergenic | 20.0% |
| !!! | TTTTTCAAATGTTTTACAAG+TGG | - | chr4_4:18138780-18138799 | None:intergenic | 20.0% |
| !!! | TCTTATACTATTTGAAATGT+AGG | + | chr4_4:18138802-18138821 | Msa0672760:intron | 20.0% |
| !!! | CTTATACTATTTGAAATGTA+GGG | + | chr4_4:18138803-18138822 | Msa0672760:intron | 20.0% |
| !!! | GTTTCTTTTATAGTTTTTCT+AGG | - | chr4_4:18139067-18139086 | None:intergenic | 20.0% |
| !! | ACTTTCTTCTAAATTTCTAA+TGG | + | chr4_4:18139247-18139266 | Msa0672760:intron | 20.0% |
| !!! | ATTTTGTTTTAACTTCTTGA+AGG | + | chr4_4:18139328-18139347 | Msa0672760:intron | 20.0% |
| !! | ATGTAAATAATCACATGTTT+AGG | - | chr4_4:18139799-18139818 | None:intergenic | 20.0% |
| !! | ATTTCTATATTGACAATTTG+AGG | + | chr4_4:18139949-18139968 | Msa0672760:intron | 20.0% |
| !!! | CTCTTTTAAATGTTTTCTAT+TGG | - | chr4_4:18140050-18140069 | None:intergenic | 20.0% |
| !! | TAGTCAATATAGAAATATTC+TGG | + | chr4_4:18140407-18140426 | Msa0672760:intron | 20.0% |
| !!! | AAAGTGCAATTGAAATATTT+TGG | + | chr4_4:18140440-18140459 | Msa0672760:intron | 20.0% |
| !!! | AAAGGTATATCTTCTTTTTT+AGG | + | chr4_4:18141058-18141077 | Msa0672760:three_prime_UTR | 20.0% |
| !!! | TTTATTTCTGTTAATTCTCC+AGG | + | chr4_4:18135630-18135649 | Msa0672760:intron | 25.0% |
| ! | ATAAGCACTTATCATGATAA+GGG | + | chr4_4:18135717-18135736 | Msa0672760:intron | 25.0% |
| ! | TTATTTGAACAGGAACTTAA+TGG | + | chr4_4:18136040-18136059 | Msa0672760:intron | 25.0% |
| !!! | TAAGGGTATTTTGAAATTCA+TGG | - | chr4_4:18136140-18136159 | None:intergenic | 25.0% |
| ! | AAAATACCCTTACAAAAGTT+GGG | + | chr4_4:18136148-18136167 | Msa0672760:intron | 25.0% |
| ! | TAACTACTTCACTTCTATAT+AGG | + | chr4_4:18136346-18136365 | Msa0672760:intron | 25.0% |
| !! | ATAAACAAACAAAGAGCATA+CGG | - | chr4_4:18136536-18136555 | None:intergenic | 25.0% |
| !!! | TATTTCCCTTTTTTTTTGCA+GGG | + | chr4_4:18137122-18137141 | Msa0672760:intron | 25.0% |
| ! | ACAAGTGAGTATTTATTTGA+CGG | + | chr4_4:18137188-18137207 | Msa0672760:intron | 25.0% |
| ! | AGTATTTATTTGACGGAAAT+GGG | + | chr4_4:18137195-18137214 | Msa0672760:intron | 25.0% |
| ! | CCTTCAGATTTAAAAAGATA+TGG | - | chr4_4:18137648-18137667 | None:intergenic | 25.0% |
| !! | CCATATCTTTTTAAATCTGA+AGG | + | chr4_4:18137645-18137664 | Msa0672760:CDS | 25.0% |
| ! | AAAGAATAATCGAAATACCT+TGG | - | chr4_4:18137710-18137729 | None:intergenic | 25.0% |
| !!! | GATTCAATTTACTTTTGACA+TGG | - | chr4_4:18138254-18138273 | None:intergenic | 25.0% |
| ! | GGTCATGTATTTAACAAAAT+TGG | + | chr4_4:18138359-18138378 | Msa0672760:intron | 25.0% |
| !!! | ATGTTGTTTTCTCTAATTTG+AGG | + | chr4_4:18138456-18138475 | Msa0672760:intron | 25.0% |
| !!! | TGTTGTTTTCTCTAATTTGA+GGG | + | chr4_4:18138457-18138476 | Msa0672760:intron | 25.0% |
| ! | TATGAAGTCATACATATGAT+TGG | + | chr4_4:18138850-18138869 | Msa0672760:intron | 25.0% |
| ! | AAATGACAACATTAGAGAAT+TGG | + | chr4_4:18138905-18138924 | Msa0672760:intron | 25.0% |
| ! | AATGACAACATTAGAGAATT+GGG | + | chr4_4:18138906-18138925 | Msa0672760:intron | 25.0% |
| !! | TATACCATCTTTTCTACTAT+AGG | - | chr4_4:18138938-18138957 | None:intergenic | 25.0% |
| !! | TGGTTTTTAATAGAACACTA+TGG | + | chr4_4:18139125-18139144 | Msa0672760:intron | 25.0% |
| ! | GAAGAAAGTCTAAATAAACT+AGG | - | chr4_4:18139236-18139255 | None:intergenic | 25.0% |
| !!! | AATTTCTAATGGTCTTATTG+TGG | + | chr4_4:18139258-18139277 | Msa0672760:intron | 25.0% |
| !!! | ATTTCTAATGGTCTTATTGT+GGG | + | chr4_4:18139259-18139278 | Msa0672760:intron | 25.0% |
| ! | CAAAAGTTTGATTGTTCTTA+AGG | - | chr4_4:18139531-18139550 | None:intergenic | 25.0% |
| !!! | AAAAAAACCACTTTTTGGAA+GGG | - | chr4_4:18140087-18140106 | None:intergenic | 25.0% |
| !!! | AAAAAAAACCACTTTTTGGA+AGG | - | chr4_4:18140088-18140107 | None:intergenic | 25.0% |
| !!! | TAGGAAAAAAAACCACTTTT+TGG | - | chr4_4:18140092-18140111 | None:intergenic | 25.0% |
| !! | AAAAGTCTTTTCTCATTACT+TGG | - | chr4_4:18140147-18140166 | None:intergenic | 25.0% |
| ! | ACTCTAATCACAAAATATTC+TGG | + | chr4_4:18140583-18140602 | Msa0672760:intron | 25.0% |
| !! | AAAAAAGTTAGTTTAACTGC+TGG | + | chr4_4:18140613-18140632 | Msa0672760:intron | 25.0% |
| ! | ACTTCTATTGAACTAAAACT+TGG | + | chr4_4:18140643-18140662 | Msa0672760:intron | 25.0% |
| !! | TGGAATAATGTTTTCCAATT+TGG | + | chr4_4:18140929-18140948 | Msa0672760:three_prime_UTR | 25.0% |
| !! | GTTTTCCAATTTGGATATAT+TGG | + | chr4_4:18140938-18140957 | Msa0672760:three_prime_UTR | 25.0% |
| ! | CAAATCCAATATATCCAAAT+TGG | - | chr4_4:18140946-18140965 | None:intergenic | 25.0% |
| ! | CAATTTGGATATATTGGATT+TGG | + | chr4_4:18140944-18140963 | Msa0672760:three_prime_UTR | 25.0% |
| !!! | TATTTTATTTTTTGGGTTGC+AGG | + | chr4_4:18141089-18141108 | Msa0672760:three_prime_UTR | 25.0% |
| !!! | ATTTTATTTTTTGGGTTGCA+GGG | + | chr4_4:18141090-18141109 | Msa0672760:three_prime_UTR | 25.0% |
| !! | TCACTAATGTACTTTTATTG+TGG | + | chr4_4:18141166-18141185 | Msa0672760:three_prime_UTR | 25.0% |
| !!! | TGTGGTGTGATATTTTTTTT+TGG | + | chr4_4:18141184-18141203 | Msa0672760:three_prime_UTR | 25.0% |
| ! | TCATGATTGCATATATATGA+AGG | + | chr4_4:18141248-18141267 | Msa0672760:three_prime_UTR | 25.0% |
| AAGAAGAGTTTAGAGAGATA+TGG | - | chr4_4:18135174-18135193 | None:intergenic | 30.0% | |
| CATAAGCACTTATCATGATA+AGG | + | chr4_4:18135716-18135735 | Msa0672760:intron | 30.0% | |
| ! | TTAAGTTGTTTATCCAAACG+TGG | + | chr4_4:18135760-18135779 | Msa0672760:intron | 30.0% |
| AATTATGCGAGCTTATCTAT+AGG | + | chr4_4:18135797-18135816 | Msa0672760:intron | 30.0% | |
| TTACACAGACAGTGTATTAT+TGG | - | chr4_4:18136066-18136085 | None:intergenic | 30.0% | |
| AAAAAATGGTGGTCTCTTAT+TGG | - | chr4_4:18136108-18136127 | None:intergenic | 30.0% | |
| !!! | GGTATTTTGAAATTCATGGT+AGG | - | chr4_4:18136136-18136155 | None:intergenic | 30.0% |
| CAAAATACCCTTACAAAAGT+TGG | + | chr4_4:18136147-18136166 | Msa0672760:intron | 30.0% | |
| ! | GGATTTTCATTAGATGTTAC+TGG | + | chr4_4:18136188-18136207 | Msa0672760:intron | 30.0% |
| TTGTTTAAGTGAATGCATGA+TGG | + | chr4_4:18136271-18136290 | Msa0672760:intron | 30.0% | |
| ! | TTGACTAACTTGTCTTTGAT+GGG | + | chr4_4:18136321-18136340 | Msa0672760:intron | 30.0% |
| TTACAAAAACAACTTGACGA+CGG | - | chr4_4:18136390-18136409 | None:intergenic | 30.0% | |
| !!! | TTGTTTTTGTAAGTAGCTTC+TGG | + | chr4_4:18136398-18136417 | Msa0672760:five_prime_UTR | 30.0% |
| !! | TGTTTTTGTAAGTAGCTTCT+GGG | + | chr4_4:18136399-18136418 | Msa0672760:five_prime_UTR | 30.0% |
| ATACGGTAGTAATCAAGAAA+AGG | - | chr4_4:18136519-18136538 | None:intergenic | 30.0% | |
| ! | GTGGTTGTGTAAATGATTTT+TGG | + | chr4_4:18136841-18136860 | Msa0672760:intron | 30.0% |
| GTCTCATTATCATTTGTTTC+AGG | + | chr4_4:18136970-18136989 | Msa0672760:intron | 30.0% | |
| TCATTATCATTTGTTTCAGG+TGG | + | chr4_4:18136973-18136992 | Msa0672760:intron | 30.0% | |
| !!! | CTATTTCCCTTTTTTTTTGC+AGG | + | chr4_4:18137121-18137140 | Msa0672760:intron | 30.0% |
| TACTCACTTGTTCAATTATG+TGG | - | chr4_4:18137179-18137198 | None:intergenic | 30.0% | |
| GAGTATTTATTTGACGGAAA+TGG | + | chr4_4:18137194-18137213 | Msa0672760:intron | 30.0% | |
| ACATAGATAACAAAAGACTC+TGG | - | chr4_4:18137240-18137259 | None:intergenic | 30.0% | |
| AAAAGCTACCTGAAACTATA+AGG | - | chr4_4:18137510-18137529 | None:intergenic | 30.0% | |
| !!! | AGGTAGCTTTTTTTAGAGTA+AGG | + | chr4_4:18137519-18137538 | Msa0672760:intron | 30.0% |
| AAGAAACATAGACTGATACA+TGG | - | chr4_4:18137553-18137572 | None:intergenic | 30.0% | |
| CCTACATATAATTACAACTG+TGG | - | chr4_4:18137615-18137634 | None:intergenic | 30.0% | |
| CCACAGTTGTAATTATATGT+AGG | + | chr4_4:18137612-18137631 | Msa0672760:intron | 30.0% | |
| GGTATTTCGATTATTCTTTC+AGG | + | chr4_4:18137711-18137730 | Msa0672760:intron | 30.0% | |
| ! | GAGCTTTATAATGAGATCAA+AGG | + | chr4_4:18137897-18137916 | Msa0672760:CDS | 30.0% |
| GTTTCTCATGGAATATATGT+TGG | - | chr4_4:18137931-18137950 | None:intergenic | 30.0% | |
| AGTGAGTGTGAATAATTGTT+TGG | + | chr4_4:18138060-18138079 | Msa0672760:intron | 30.0% | |
| ! | AATAATTGTTTGGTGGAAGT+GGG | + | chr4_4:18138070-18138089 | Msa0672760:intron | 30.0% |
| !!! | ATTTGTATGGTGGATTCTTT+TGG | + | chr4_4:18138139-18138158 | Msa0672760:intron | 30.0% |
| ATAAGAGAGTGAAGAGATTT+GGG | - | chr4_4:18138165-18138184 | None:intergenic | 30.0% | |
| TATAAGAGAGTGAAGAGATT+TGG | - | chr4_4:18138166-18138185 | None:intergenic | 30.0% | |
| !!! | ACTTAATTGCGTTTTAGGAA+AGG | - | chr4_4:18138196-18138215 | None:intergenic | 30.0% |
| AAAGAAATGAGCAATTCAGA+TGG | - | chr4_4:18138310-18138329 | None:intergenic | 30.0% | |
| AAAATTGGATTTGACGGTTA+TGG | + | chr4_4:18138374-18138393 | Msa0672760:intron | 30.0% | |
| !! | GTTGTTTTCTCTAATTTGAG+GGG | + | chr4_4:18138458-18138477 | Msa0672760:intron | 30.0% |
| AACCTCTTGTGTAAAAAACA+AGG | + | chr4_4:18138549-18138568 | Msa0672760:intron | 30.0% | |
| !!! | TACCTTGTTTTTTACACAAG+AGG | - | chr4_4:18138554-18138573 | None:intergenic | 30.0% |
| CTTGTGTAAAAAACAAGGTA+CGG | + | chr4_4:18138554-18138573 | Msa0672760:intron | 30.0% | |
| GAATGTTGTGAAGAATATGA+AGG | - | chr4_4:18138679-18138698 | None:intergenic | 30.0% | |
| GTTTGATTAGAGACTTGAAA+CGG | + | chr4_4:18138734-18138753 | Msa0672760:intron | 30.0% | |
| ATGACAACATTAGAGAATTG+GGG | + | chr4_4:18138907-18138926 | Msa0672760:intron | 30.0% | |
| AGAACCTATAGTAGAAAAGA+TGG | + | chr4_4:18138931-18138950 | Msa0672760:intron | 30.0% | |
| GACCTATGAATTATGTAGTA+AGG | + | chr4_4:18138993-18139012 | Msa0672760:intron | 30.0% | |
| CTCCTTACTACATAATTCAT+AGG | - | chr4_4:18138998-18139017 | None:intergenic | 30.0% | |
| ! | TGGGTTTTCATTGTTTGATT+TGG | + | chr4_4:18139278-18139297 | Msa0672760:intron | 30.0% |
| !! | GGGTTTTCATTGTTTGATTT+GGG | + | chr4_4:18139279-18139298 | Msa0672760:intron | 30.0% |
| GAGAGAAAAAGACTAATAGA+AGG | - | chr4_4:18139382-18139401 | None:intergenic | 30.0% | |
| ACAAAGCAAGTTAAACAACT+CGG | - | chr4_4:18139428-18139447 | None:intergenic | 30.0% | |
| ! | GTTTTTATTCTCCGATCAAA+TGG | + | chr4_4:18139501-18139520 | Msa0672760:intron | 30.0% |
| GTTAGATTCTACATGCAAAT+TGG | + | chr4_4:18139557-18139576 | Msa0672760:intron | 30.0% | |
| !! | CAGTATTGACGATAAATTTC+AGG | - | chr4_4:18139684-18139703 | None:intergenic | 30.0% |
| CTGAAATTTATCGTCAATAC+TGG | + | chr4_4:18139682-18139701 | Msa0672760:CDS | 30.0% | |
| CCTCATATATTATGACTTAG+AGG | - | chr4_4:18139863-18139882 | None:intergenic | 30.0% | |
| CCTCTAAGTCATAATATATG+AGG | + | chr4_4:18139860-18139879 | Msa0672760:intron | 30.0% | |
| AGTCATAATATATGAGGTAG+AGG | + | chr4_4:18139866-18139885 | Msa0672760:intron | 30.0% | |
| ATATTGACAATTTGAGGAGA+AGG | + | chr4_4:18139955-18139974 | Msa0672760:intron | 30.0% | |
| CATATGATCAGATCCTATAT+GGG | - | chr4_4:18139991-18140010 | None:intergenic | 30.0% | |
| ATCATATGGAGGATAACTTT+GGG | + | chr4_4:18140003-18140022 | Msa0672760:intron | 30.0% | |
| GATCAATTGAAGCTATCATT+AGG | - | chr4_4:18140111-18140130 | None:intergenic | 30.0% | |
| AAATTCAAAAGTGGGATATC+AGG | + | chr4_4:18140247-18140266 | Msa0672760:intron | 30.0% | |
| AATTCAAAAGTGGGATATCA+GGG | + | chr4_4:18140248-18140267 | Msa0672760:intron | 30.0% | |
| ! | CAAATCCTTTTAGACAACTT+TGG | - | chr4_4:18140279-18140298 | None:intergenic | 30.0% |
| TTGAACAGTTAAACTTCAGT+AGG | - | chr4_4:18140315-18140334 | None:intergenic | 30.0% | |
| CCAAGTCAAAGAATCAATAA+AGG | - | chr4_4:18140897-18140916 | None:intergenic | 30.0% | |
| !! | CCTTTATTGATTCTTTGACT+TGG | + | chr4_4:18140894-18140913 | Msa0672760:three_prime_UTR | 30.0% |
| !! | ATTCTTTGACTTGGATGTAT+TGG | + | chr4_4:18140903-18140922 | Msa0672760:three_prime_UTR | 30.0% |
| ! | TGGAATAATGTTTTCCAATC+TGG | + | chr4_4:18140964-18140983 | Msa0672760:three_prime_UTR | 30.0% |
| GATATACCTTTCACTAAAAC+TGG | - | chr4_4:18141049-18141068 | None:intergenic | 30.0% | |
| !!! | GGTGTGATATTTTTTTTTGG+TGG | + | chr4_4:18141187-18141206 | Msa0672760:three_prime_UTR | 30.0% |
| ! | GAGAGATATGGATTGAGAAT+AGG | - | chr4_4:18135162-18135181 | None:intergenic | 35.0% |
| TAATTCTCCAGGATAGCTTA+CGG | + | chr4_4:18135641-18135660 | Msa0672760:intron | 35.0% | |
| AATCAAACAATGACCACGTT+TGG | - | chr4_4:18135776-18135795 | None:intergenic | 35.0% | |
| CATGGTAGGACTTGAAAAAA+TGG | - | chr4_4:18136122-18136141 | None:intergenic | 35.0% | |
| ! | ACATCACCCAACTTTTGTAA+GGG | - | chr4_4:18136157-18136176 | None:intergenic | 35.0% |
| ! | CTTGACTAACTTGTCTTTGA+TGG | + | chr4_4:18136320-18136339 | Msa0672760:intron | 35.0% |
| CTTCACTTCTATATAGGATC+AGG | + | chr4_4:18136352-18136371 | Msa0672760:intron | 35.0% | |
| TACAAAAACAACTTGACGAC+GGG | - | chr4_4:18136389-18136408 | None:intergenic | 35.0% | |
| AAGTGCACAGATTTAGTGAA+AGG | - | chr4_4:18136492-18136511 | None:intergenic | 35.0% | |
| TAAAGAAGCTAAGGAATCAG+CGG | + | chr4_4:18136583-18136602 | Msa0672760:CDS | 35.0% | |
| AAAGAGTAATGTAGCTGAAG+TGG | + | chr4_4:18136637-18136656 | Msa0672760:CDS | 35.0% | |
| TGTACAGGATCGAATGATAT+CGG | + | chr4_4:18136727-18136746 | Msa0672760:CDS | 35.0% | |
| GAAGAATCTGAGCATCAAAT+TGG | - | chr4_4:18136929-18136948 | None:intergenic | 35.0% | |
| ! | GTTTCAGGTGGCAAAAATAA+CGG | + | chr4_4:18136985-18137004 | Msa0672760:intron | 35.0% |
| TCTTGACAGACATTGAAAGA+TGG | + | chr4_4:18137026-18137045 | Msa0672760:CDS | 35.0% | |
| AGACATTGAAAGATGGCAAA+AGG | + | chr4_4:18137033-18137052 | Msa0672760:CDS | 35.0% | |
| ! | GGCAAAAGGTATATGACATT+TGG | + | chr4_4:18137047-18137066 | Msa0672760:intron | 35.0% |
| CAACTCCCTGCAAAAAAAAA+GGG | - | chr4_4:18137130-18137149 | None:intergenic | 35.0% | |
| TAGTTCCGTTGATCTAACAA+GGG | + | chr4_4:18137265-18137284 | Msa0672760:intron | 35.0% | |
| AAGATCCCTTGTTAGATCAA+CGG | - | chr4_4:18137273-18137292 | None:intergenic | 35.0% | |
| ACGATTAACTACTAGAATGC+AGG | - | chr4_4:18137382-18137401 | None:intergenic | 35.0% | |
| CTCTGTACAGTAATCTCAAT+CGG | - | chr4_4:18137436-18137455 | None:intergenic | 35.0% | |
| TTGACTAGTATCTGAGGAAT+AGG | - | chr4_4:18137475-18137494 | None:intergenic | 35.0% | |
| GCAGATTACCTTATAGTTTC+AGG | + | chr4_4:18137499-18137518 | Msa0672760:CDS | 35.0% | |
| TAAATCTGAAGGGGACAAAA+AGG | + | chr4_4:18137656-18137675 | Msa0672760:CDS | 35.0% | |
| CAAAAAGGTTATTCAGCAGT+TGG | + | chr4_4:18137671-18137690 | Msa0672760:CDS | 35.0% | |
| CGAAATACCTTGGTTGTATA+GGG | - | chr4_4:18137700-18137719 | None:intergenic | 35.0% | |
| TCGAAATACCTTGGTTGTAT+AGG | - | chr4_4:18137701-18137720 | None:intergenic | 35.0% | |
| CTCATTATAAAGCTCCAATG+TGG | - | chr4_4:18137892-18137911 | None:intergenic | 35.0% | |
| CCTCTTAAGTATGTTTCTCA+TGG | - | chr4_4:18137943-18137962 | None:intergenic | 35.0% | |
| CCATGAGAAACATACTTAAG+AGG | + | chr4_4:18137940-18137959 | Msa0672760:CDS | 35.0% | |
| TCAGAAGTCACTTCTCAATA+AGG | + | chr4_4:18138022-18138041 | Msa0672760:CDS | 35.0% | |
| GAGTGTGAATAATTGTTTGG+TGG | + | chr4_4:18138063-18138082 | Msa0672760:intron | 35.0% | |
| ! | GAATAATTGTTTGGTGGAAG+TGG | + | chr4_4:18138069-18138088 | Msa0672760:intron | 35.0% |
| TAAAGTTGTTGTCATGTGAC+TGG | + | chr4_4:18138499-18138518 | Msa0672760:intron | 35.0% | |
| AGAATATGAAGGTAAGCTGA+TGG | - | chr4_4:18138668-18138687 | None:intergenic | 35.0% | |
| TAGAGACTTGAAACGGTAAA+TGG | + | chr4_4:18138741-18138760 | Msa0672760:intron | 35.0% | |
| CATACATATGATTGGATGTG+TGG | + | chr4_4:18138858-18138877 | Msa0672760:intron | 35.0% | |
| TGGTATAAGCTAGACTTAGT+TGG | + | chr4_4:18138951-18138970 | Msa0672760:intron | 35.0% | |
| TAAGCTAGACTTAGTTGGTT+TGG | + | chr4_4:18138956-18138975 | Msa0672760:intron | 35.0% | |
| ! | AAGCTAGACTTAGTTGGTTT+GGG | + | chr4_4:18138957-18138976 | Msa0672760:intron | 35.0% |
| GGATCTAGAGATTAATGAGT+TGG | + | chr4_4:18139093-18139112 | Msa0672760:intron | 35.0% | |
| ! | TAATGAGTTGGAGAAAGACA+TGG | + | chr4_4:18139105-18139124 | Msa0672760:intron | 35.0% |
| ! | TGTTGTTGTTGTATCTTCTC+TGG | + | chr4_4:18139197-18139216 | Msa0672760:intron | 35.0% |
| ! | GTTGTTGTTGTATCTTCTCT+GGG | + | chr4_4:18139198-18139217 | Msa0672760:intron | 35.0% |
| CAAAGCAAGTTAAACAACTC+GGG | - | chr4_4:18139427-18139446 | None:intergenic | 35.0% | |
| !! | CATTGTTGACTTTGTTCAGA+TGG | + | chr4_4:18139599-18139618 | Msa0672760:intron | 35.0% |
| ! | ACTTTGTTCAGATGGATTCT+CGG | + | chr4_4:18139607-18139626 | Msa0672760:intron | 35.0% |
| CCATATGATCAGATCCTATA+TGG | - | chr4_4:18139992-18140011 | None:intergenic | 35.0% | |
| CCATATAGGATCTGATCATA+TGG | + | chr4_4:18139989-18140008 | Msa0672760:intron | 35.0% | |
| TATAGGATCTGATCATATGG+AGG | + | chr4_4:18139992-18140011 | Msa0672760:intron | 35.0% | |
| GATCATATGGAGGATAACTT+TGG | + | chr4_4:18140002-18140021 | Msa0672760:intron | 35.0% | |
| TTATTTGCCCTTCCAAAAAG+TGG | + | chr4_4:18140077-18140096 | Msa0672760:intron | 35.0% | |
| !! | TTGCTATTGTTGTTTAGTGC+TGG | + | chr4_4:18140171-18140190 | Msa0672760:intron | 35.0% |
| !! | TGCTATTGTTGTTTAGTGCT+GGG | + | chr4_4:18140172-18140191 | Msa0672760:intron | 35.0% |
| GTTAAACTTCAGTAGGTGTA+TGG | - | chr4_4:18140308-18140327 | None:intergenic | 35.0% | |
| ! | TCTTAGTGCATTTTCATGTC+AGG | - | chr4_4:18140360-18140379 | None:intergenic | 35.0% |
| GACATGAAAATGCACTAAGA+AGG | + | chr4_4:18140360-18140379 | Msa0672760:intron | 35.0% | |
| ! | ATTAACTGATGTTAGCCTCT+TGG | + | chr4_4:18140481-18140500 | Msa0672760:intron | 35.0% |
| ! | TTAACTGATGTTAGCCTCTT+GGG | + | chr4_4:18140482-18140501 | Msa0672760:intron | 35.0% |
| AATAAGAGAAGATGCATCCA+TGG | - | chr4_4:18140746-18140765 | None:intergenic | 35.0% | |
| TGCATCTTCTCTTATTCCTT+TGG | + | chr4_4:18140750-18140769 | Msa0672760:CDS | 35.0% | |
| TCTCTTATTCCTTTGGATGA+AGG | + | chr4_4:18140757-18140776 | Msa0672760:CDS | 35.0% | |
| ! | TGACTTGGATGTATTGGATT+TGG | + | chr4_4:18140909-18140928 | Msa0672760:three_prime_UTR | 35.0% |
| TATAGCAGCTATGTTTATGC+TGG | + | chr4_4:18141002-18141021 | Msa0672760:three_prime_UTR | 35.0% | |
| ATAGCAGCTATGTTTATGCT+GGG | + | chr4_4:18141003-18141022 | Msa0672760:three_prime_UTR | 35.0% | |
| CTATACCTTGTTCGATTCAG+TGG | - | chr4_4:18135235-18135254 | None:intergenic | 40.0% | |
| ! | AGAGTGTTTGAGAGAGCTTA+TGG | + | chr4_4:18135834-18135853 | Msa0672760:intron | 40.0% |
| GAGTGTTTGAGAGAGCTTAT+GGG | + | chr4_4:18135835-18135854 | Msa0672760:intron | 40.0% | |
| GGTAGGACTTGAAAAAATGG+TGG | - | chr4_4:18136119-18136138 | None:intergenic | 40.0% | |
| ! | CACATCACCCAACTTTTGTA+AGG | - | chr4_4:18136158-18136177 | None:intergenic | 40.0% |
| CTTACAAAAGTTGGGTGATG+TGG | + | chr4_4:18136156-18136175 | Msa0672760:intron | 40.0% | |
| ! | AGTGGTTTCTTTTCTTCCTC+AGG | + | chr4_4:18136464-18136483 | Msa0672760:CDS | 40.0% |
| !! | GATTTAGTGAAAGGTACCTG+AGG | - | chr4_4:18136483-18136502 | None:intergenic | 40.0% |
| GGTCAAGCTTAAAGAAGCTA+AGG | + | chr4_4:18136574-18136593 | Msa0672760:CDS | 40.0% | |
| AAAGAAGCTAAGGAATCAGC+GGG | + | chr4_4:18136584-18136603 | Msa0672760:CDS | 40.0% | |
| TTGGGACGGTATTCAAAAGT+CGG | + | chr4_4:18136669-18136688 | Msa0672760:CDS | 40.0% | |
| TGTACAGCATGTCTTGTAGA+CGG | - | chr4_4:18136713-18136732 | None:intergenic | 40.0% | |
| TTTGTCAGGGACAAAAGAGA+AGG | + | chr4_4:18136784-18136803 | Msa0672760:CDS | 40.0% | |
| ACAAAAGAGAAGGTGGTTGT+GGG | + | chr4_4:18136794-18136813 | Msa0672760:CDS | 40.0% | |
| GCAACTCCCTGCAAAAAAAA+AGG | - | chr4_4:18137131-18137150 | None:intergenic | 40.0% | |
| GTAGTTCCGTTGATCTAACA+AGG | + | chr4_4:18137264-18137283 | Msa0672760:intron | 40.0% | |
| TGCATAGCAGTGTGTCAAAA+TGG | - | chr4_4:18137306-18137325 | None:intergenic | 40.0% | |
| CAATCGGAACTCCAAATACT+GGG | - | chr4_4:18137420-18137439 | None:intergenic | 40.0% | |
| TCAATCGGAACTCCAAATAC+TGG | - | chr4_4:18137421-18137440 | None:intergenic | 40.0% | |
| CGATTGAGATTACTGTACAG+AGG | + | chr4_4:18137434-18137453 | Msa0672760:CDS | 40.0% | |
| GCACAATTGACTAGTATCTG+AGG | - | chr4_4:18137481-18137500 | None:intergenic | 40.0% | |
| TCTAATTTGAGGGGTAACCT+TGG | + | chr4_4:18138467-18138486 | Msa0672760:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr4_4:18138580-18138599 | Msa0672760:intron | 40.0% | |
| ATACCTTATCCCACTATGTG+GGG | - | chr4_4:18139174-18139193 | None:intergenic | 40.0% | |
| CATACCTTATCCCACTATGT+GGG | - | chr4_4:18139175-18139194 | None:intergenic | 40.0% | |
| TCATATTCAGGGAGTGAAGA+AGG | - | chr4_4:18139463-18139482 | None:intergenic | 40.0% | |
| CTCCCTGAATATGATCATCA+CGG | + | chr4_4:18139469-18139488 | Msa0672760:intron | 40.0% | |
| CACCGTGATGATCATATTCA+GGG | - | chr4_4:18139474-18139493 | None:intergenic | 40.0% | |
| TCACCGTGATGATCATATTC+AGG | - | chr4_4:18139475-18139494 | None:intergenic | 40.0% | |
| CTTAAGGTCAGCCATTTGAT+CGG | - | chr4_4:18139515-18139534 | None:intergenic | 40.0% | |
| AAATGGCACCTGTTATCATG+TGG | + | chr4_4:18139643-18139662 | Msa0672760:CDS | 40.0% | |
| ACCTGTTATCATGTGGCAAA+AGG | + | chr4_4:18139650-18139669 | Msa0672760:CDS | 40.0% | |
| CCTGTTATCATGTGGCAAAA+GGG | + | chr4_4:18139651-18139670 | Msa0672760:CDS | 40.0% | |
| TTCTGGATTCAAGCTCTGTT+TGG | - | chr4_4:18139730-18139749 | None:intergenic | 40.0% | |
| AGAACCTGGTTCAACTACTT+GGG | + | chr4_4:18139746-18139765 | Msa0672760:CDS | 40.0% | |
| TTTGAGGAGAAGGCCAATAT+AGG | + | chr4_4:18139965-18139984 | Msa0672760:intron | 40.0% | |
| GATCCTATATGGGCCTATAT+TGG | - | chr4_4:18139981-18140000 | None:intergenic | 40.0% | |
| AGGATAACTTTGGGTGTAGA+AGG | + | chr4_4:18140012-18140031 | Msa0672760:intron | 40.0% | |
| AAGCGCCAAAGTTGTCTAAA+AGG | + | chr4_4:18140271-18140290 | Msa0672760:intron | 40.0% | |
| TTTGGAAAGAAGATCCCAAG+AGG | - | chr4_4:18140499-18140518 | None:intergenic | 40.0% | |
| TCTTGGGATCTTCTTTCCAA+AGG | + | chr4_4:18140498-18140517 | Msa0672760:intron | 40.0% | |
| CTTGGGATCTTCTTTCCAAA+GGG | + | chr4_4:18140499-18140518 | Msa0672760:intron | 40.0% | |
| AAATGTTTAGCCACACCCTT+TGG | - | chr4_4:18140517-18140536 | None:intergenic | 40.0% | |
| AAACTTGGTCTGCACTGAAA+TGG | + | chr4_4:18140658-18140677 | Msa0672760:intron | 40.0% | |
| TAGCAGCTATGTTTATGCTG+GGG | + | chr4_4:18141004-18141023 | Msa0672760:three_prime_UTR | 40.0% | |
| TTTATGCTGGGGAAACATGT+TGG | + | chr4_4:18141015-18141034 | Msa0672760:three_prime_UTR | 40.0% | |
| TTATGCTGGGGAAACATGTT+GGG | + | chr4_4:18141016-18141035 | Msa0672760:three_prime_UTR | 40.0% | |
| !! | ACTGGTCCAGTTTTAGTGAA+AGG | + | chr4_4:18141040-18141059 | Msa0672760:three_prime_UTR | 40.0% |
| !!! | TTATTTTTTGGGTTGCAGGG+AGG | + | chr4_4:18141093-18141112 | Msa0672760:three_prime_UTR | 40.0% |
| TTAGTGATGAGAGTTTCTGC+AGG | - | chr4_4:18141153-18141172 | None:intergenic | 40.0% | |
| CTCTTCCACTGAATCGAACA+AGG | + | chr4_4:18135227-18135246 | Msa0672760:five_prime_UTR | 45.0% | |
| CAATAAGCCGTAAGCTATCC+TGG | - | chr4_4:18135651-18135670 | None:intergenic | 45.0% | |
| GGTCTCTTATTGGATGTCAG+TGG | - | chr4_4:18136098-18136117 | None:intergenic | 45.0% | |
| TGGGTGATGTGGCAAATTAG+TGG | + | chr4_4:18136167-18136186 | Msa0672760:intron | 45.0% | |
| CACTGAGGTGAGATAACAGA+AGG | - | chr4_4:18136431-18136450 | None:intergenic | 45.0% | |
| CTTCTGTTATCTCACCTCAG+TGG | + | chr4_4:18136429-18136448 | Msa0672760:CDS | 45.0% | |
| GAGTAATGTAGCTGAAGTGG+CGG | + | chr4_4:18136640-18136659 | Msa0672760:CDS | 45.0% | |
| AGTAATGTAGCTGAAGTGGC+GGG | + | chr4_4:18136641-18136660 | Msa0672760:CDS | 45.0% | |
| GACGGTATTCAAAAGTCGGT+GGG | + | chr4_4:18136673-18136692 | Msa0672760:CDS | 45.0% | |
| GTCTACAAGACATGCTGTAC+AGG | + | chr4_4:18136712-18136731 | Msa0672760:CDS | 45.0% | |
| GACAAAAGAGAAGGTGGTTG+TGG | + | chr4_4:18136793-18136812 | Msa0672760:CDS | 45.0% | |
| CAAAAGAGAAGGTGGTTGTG+GGG | + | chr4_4:18136795-18136814 | Msa0672760:CDS | 45.0% | |
| CCACATTACCTCTTCAACCT+TGG | - | chr4_4:18136825-18136844 | None:intergenic | 45.0% | |
| CCAAGGTTGAAGAGGTAATG+TGG | + | chr4_4:18136822-18136841 | Msa0672760:intron | 45.0% | |
| CAGGGAGTTGCTAAAACTGA+CGG | + | chr4_4:18137140-18137159 | Msa0672760:intron | 45.0% | |
| CATCTTGACCACCCAGTATT+TGG | + | chr4_4:18137406-18137425 | Msa0672760:intron | 45.0% | |
| TTGGTTGCCCTATACAACCA+AGG | + | chr4_4:18137690-18137709 | Msa0672760:CDS | 45.0% | |
| TCAACTGGATTTGAGCCTTC+TGG | - | chr4_4:18137819-18137838 | None:intergenic | 45.0% | |
| ACAAGAGCTGCTACATCAAC+TGG | - | chr4_4:18137834-18137853 | None:intergenic | 45.0% | |
| TAAAGCTCCAATGTGGTCAG+TGG | - | chr4_4:18137885-18137904 | None:intergenic | 45.0% | |
| CAGAGTCATATAGTTCACGC+TGG | - | chr4_4:18137970-18137989 | None:intergenic | 45.0% | |
| CAGCGTGAACTATATGACTC+TGG | + | chr4_4:18137968-18137987 | Msa0672760:CDS | 45.0% | |
| GAAGTGACTTCTGACTAGCA+CGG | - | chr4_4:18138016-18138035 | None:intergenic | 45.0% | |
| ! | TTGTTTGGTGGAAGTGGGAT+TGG | + | chr4_4:18138075-18138094 | Msa0672760:intron | 45.0% |
| ! | TGTTTGGTGGAAGTGGGATT+GGG | + | chr4_4:18138076-18138095 | Msa0672760:intron | 45.0% |
| GTGGGATTGGGTTTCGTATA+TGG | + | chr4_4:18138088-18138107 | Msa0672760:intron | 45.0% | |
| GTTGTTGTCATGTGACTGGA+AGG | + | chr4_4:18138503-18138522 | Msa0672760:intron | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | chr4_4:18138576-18138595 | Msa0672760:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr4_4:18138579-18138598 | Msa0672760:intron | 45.0% | |
| GGATGTGTGGTAAGACTAGA+CGG | + | chr4_4:18138871-18138890 | Msa0672760:intron | 45.0% | |
| GATGTGTGGTAAGACTAGAC+GGG | + | chr4_4:18138872-18138891 | Msa0672760:intron | 45.0% | |
| AAGGAGAGTAGATCAGATCG+AGG | + | chr4_4:18139012-18139031 | Msa0672760:intron | 45.0% | |
| AGGAGAGTAGATCAGATCGA+GGG | + | chr4_4:18139013-18139032 | Msa0672760:intron | 45.0% | |
| GAGTCATGTCACTAGTGGTA+GGG | + | chr4_4:18139036-18139055 | Msa0672760:intron | 45.0% | |
| AGTCATGTCACTAGTGGTAG+GGG | + | chr4_4:18139037-18139056 | Msa0672760:intron | 45.0% | |
| GGTCGGCTACATGAATCAAA+CGG | - | chr4_4:18139153-18139172 | None:intergenic | 45.0% | |
| CCATACCTTATCCCACTATG+TGG | - | chr4_4:18139176-18139195 | None:intergenic | 45.0% | |
| ! | CCACATAGTGGGATAAGGTA+TGG | + | chr4_4:18139173-18139192 | Msa0672760:intron | 45.0% |
| !! | TGTTGTATCTTCTCTGGGAC+AGG | + | chr4_4:18139203-18139222 | Msa0672760:intron | 45.0% |
| ! | CCCTTTTGCCACATGATAAC+AGG | - | chr4_4:18139654-18139673 | None:intergenic | 45.0% |
| GGATTCAAGCTCTGTTTGGA+AGG | - | chr4_4:18139726-18139745 | None:intergenic | 45.0% | |
| CAAGTAGTTGAACCAGGTTC+TGG | - | chr4_4:18139747-18139766 | None:intergenic | 45.0% | |
| CAGAACCTGGTTCAACTACT+TGG | + | chr4_4:18139745-18139764 | Msa0672760:CDS | 45.0% | |
| ATGTCCCAAGTAGTTGAACC+AGG | - | chr4_4:18139753-18139772 | None:intergenic | 45.0% | |
| AGGCCAATATAGGCCCATAT+AGG | + | chr4_4:18139975-18139994 | Msa0672760:intron | 45.0% | |
| AGAAGGTGACACTGTTCTTG+AGG | + | chr4_4:18140377-18140396 | Msa0672760:intron | 45.0% | |
| GATCTTCTTTCCAAAGGGTG+TGG | + | chr4_4:18140504-18140523 | Msa0672760:intron | 45.0% | |
| !! | TGCACTGAAATGGTGCTGAT+TGG | + | chr4_4:18140668-18140687 | Msa0672760:intron | 45.0% |
| TCATTTCCAGACTGTCTCGT+TGG | - | chr4_4:18140857-18140876 | None:intergenic | 45.0% | |
| AATGATCGTCACGTCCAGAT+TGG | - | chr4_4:18140981-18141000 | None:intergenic | 45.0% | |
| !!! | AAAATTAATAATTTACTTTT+TGG | - | chr4_4:18135421-18135440 | None:intergenic | 5.0% |
| !! | TTTATATATAAATTTAATGT+AGG | + | chr4_4:18136551-18136570 | Msa0672760:intron | 5.0% |
| !! | TTATATATAAATTTAATGTA+GGG | + | chr4_4:18136552-18136571 | Msa0672760:intron | 5.0% |
| !!! | TTTTTACTTTAATTAAAAAT+TGG | + | chr4_4:18137350-18137369 | Msa0672760:intron | 5.0% |
| !!! | ATTAAGTAATTAATTTTTTT+TGG | + | chr4_4:18138209-18138228 | Msa0672760:intron | 5.0% |
| !!! | TCTTTTAATATTTTATTTTT+TGG | + | chr4_4:18141081-18141100 | Msa0672760:three_prime_UTR | 5.0% |
| !!! | CTTTTAATATTTTATTTTTT+GGG | + | chr4_4:18141082-18141101 | Msa0672760:three_prime_UTR | 5.0% |
| AGTCTCGCACGTACTTGTGT+CGG | - | chr4_4:18135564-18135583 | None:intergenic | 50.0% | |
| CTCACCTCAGTGGCAAGATA+AGG | + | chr4_4:18136439-18136458 | Msa0672760:CDS | 50.0% | |
| GAATCAGCGGGAACGTTTGT+TGG | + | chr4_4:18136596-18136615 | Msa0672760:CDS | 50.0% | |
| ! | GTTTGTTGGCGAGGTCACAA+AGG | + | chr4_4:18136610-18136629 | Msa0672760:CDS | 50.0% |
| ! | CTGAAGTGGCGGGAAAAGTT+GGG | + | chr4_4:18136651-18136670 | Msa0672760:CDS | 50.0% |
| GGACGGTATTCAAAAGTCGG+TGG | + | chr4_4:18136672-18136691 | Msa0672760:CDS | 50.0% | |
| TTCCTGAGGAGAGGTTTGTC+AGG | + | chr4_4:18136770-18136789 | Msa0672760:CDS | 50.0% | |
| TCCTGAGGAGAGGTTTGTCA+GGG | + | chr4_4:18136771-18136790 | Msa0672760:CDS | 50.0% | |
| GTCAGGGACAAAAGAGAAGG+TGG | + | chr4_4:18136787-18136806 | Msa0672760:CDS | 50.0% | |
| GGGGAAATCCAAGGTTGAAG+AGG | + | chr4_4:18136814-18136833 | Msa0672760:CDS | 50.0% | |
| TCGGAACTCCAAATACTGGG+TGG | - | chr4_4:18137417-18137436 | None:intergenic | 50.0% | |
| ACTAGCACGGAGCAAAAGTG+CGG | - | chr4_4:18138003-18138022 | None:intergenic | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | - | chr4_4:18138487-18138506 | None:intergenic | 50.0% | |
| GTCATGTGACTGGAAGGTCA+CGG | + | chr4_4:18138509-18138528 | Msa0672760:intron | 50.0% | |
| TCATGTGACTGGAAGGTCAC+GGG | + | chr4_4:18138510-18138529 | Msa0672760:intron | 50.0% | |
| AAGGTCACGGGTTCAAGTCT+TGG | + | chr4_4:18138522-18138541 | Msa0672760:intron | 50.0% | |
| CTAAAGCTCCAGCATACGCA+GGG | - | chr4_4:18138619-18138638 | None:intergenic | 50.0% | |
| ACTAAAGCTCCAGCATACGC+AGG | - | chr4_4:18138620-18138639 | None:intergenic | 50.0% | |
| ! | ATGCTGGAGCTTTAGTGCAC+CGG | + | chr4_4:18138624-18138643 | Msa0672760:intron | 50.0% |
| AGCTGATGGCCAGACACAAA+GGG | - | chr4_4:18138654-18138673 | None:intergenic | 50.0% | |
| AAGCTGATGGCCAGACACAA+AGG | - | chr4_4:18138655-18138674 | None:intergenic | 50.0% | |
| GGAGAGTAGATCAGATCGAG+GGG | + | chr4_4:18139014-18139033 | Msa0672760:intron | 50.0% | |
| GGAGTCATGTCACTAGTGGT+AGG | + | chr4_4:18139035-18139054 | Msa0672760:intron | 50.0% | |
| CTTATCCCACTATGTGGGGT+CGG | - | chr4_4:18139170-18139189 | None:intergenic | 50.0% | |
| CGGGAAACAGAGCTAAAACG+AGG | - | chr4_4:18139408-18139427 | None:intergenic | 50.0% | |
| TCGGAGCCTTGCAATGGAAA+TGG | + | chr4_4:18139626-18139645 | Msa0672760:CDS | 50.0% | |
| !! | CAGGTGCCATTTCCATTGCA+AGG | - | chr4_4:18139635-18139654 | None:intergenic | 50.0% |
| CAGAGCTTGAATCCAGAACC+TGG | + | chr4_4:18139732-18139751 | Msa0672760:CDS | 50.0% | |
| AGGTGACACTGTTCTTGAGG+AGG | + | chr4_4:18140380-18140399 | Msa0672760:intron | 50.0% | |
| ACTGGCATGCCTTCATCCAA+AGG | - | chr4_4:18140769-18140788 | None:intergenic | 50.0% | |
| ! | GAAGGCATGCCAGTTGACTT+CGG | + | chr4_4:18140775-18140794 | Msa0672760:CDS | 50.0% |
| TCGATTGCACCGAAGTCAAC+TGG | - | chr4_4:18140787-18140806 | None:intergenic | 50.0% | |
| TGGGGAAACATGTTGGGTAC+TGG | + | chr4_4:18141022-18141041 | Msa0672760:three_prime_UTR | 50.0% | |
| CTCGCCTTATCTTGCCACTG+AGG | - | chr4_4:18136446-18136465 | None:intergenic | 55.0% | |
| CAGTGGCAAGATAAGGCGAG+TGG | + | chr4_4:18136446-18136465 | Msa0672760:CDS | 55.0% | |
| ! | GCTGAAGTGGCGGGAAAAGT+TGG | + | chr4_4:18136650-18136669 | Msa0672760:CDS | 55.0% |
| ! | AGTGGCGGGAAAAGTTGGGA+CGG | + | chr4_4:18136655-18136674 | Msa0672760:CDS | 55.0% |
| ! | ATATCGGCTGCTGCTACGAC+TGG | + | chr4_4:18136743-18136762 | Msa0672760:CDS | 55.0% |
| CTACGACTGGTGCATTCCTG+AGG | + | chr4_4:18136756-18136775 | Msa0672760:CDS | 55.0% | |
| ACTGGTGCATTCCTGAGGAG+AGG | + | chr4_4:18136761-18136780 | Msa0672760:CDS | 55.0% | |
| TCCCTGACAAACCTCTCCTC+AGG | - | chr4_4:18136775-18136794 | None:intergenic | 55.0% | |
| GGTGGTTGTGGGGAAATCCA+AGG | + | chr4_4:18136805-18136824 | Msa0672760:CDS | 55.0% | |
| TCAACTGCTGCAGTGCCAGA+AGG | + | chr4_4:18137801-18137820 | Msa0672760:CDS | 55.0% | |
| ATGTGGTCAGTGGCTCAGGA+AGG | - | chr4_4:18137875-18137894 | None:intergenic | 55.0% | |
| TCCTGAGCCACTGACCACAT+TGG | + | chr4_4:18137875-18137894 | Msa0672760:CDS | 55.0% | |
| TCCAATGTGGTCAGTGGCTC+AGG | - | chr4_4:18137879-18137898 | None:intergenic | 55.0% | |
| ! | TGCTGGAGCTTTAGTGCACC+GGG | + | chr4_4:18138625-18138644 | Msa0672760:intron | 55.0% |
| GAGGGGAGTCATGTCACTAG+TGG | + | chr4_4:18139031-18139050 | Msa0672760:intron | 55.0% | |
| ATGTAGCCGACCCCACATAG+TGG | + | chr4_4:18139161-18139180 | Msa0672760:intron | 55.0% | |
| TGTAGCCGACCCCACATAGT+GGG | + | chr4_4:18139162-18139181 | Msa0672760:intron | 55.0% | |
| ! | CGACCCCACATAGTGGGATA+AGG | + | chr4_4:18139168-18139187 | Msa0672760:intron | 55.0% |
| GGATTCTCGGAGCCTTGCAA+TGG | + | chr4_4:18139620-18139639 | Msa0672760:CDS | 55.0% | |
| ACTACTTGGGACATGCTCGC+TGG | + | chr4_4:18139759-18139778 | Msa0672760:CDS | 55.0% | |
| TGCAGACGAGAGTGAAGCCA+TGG | + | chr4_4:18140726-18140745 | Msa0672760:intron | 55.0% | |
| CAGATGCCAACGAGACAGTC+TGG | + | chr4_4:18140848-18140867 | Msa0672760:CDS | 55.0% | |
| ! | AGCGGGAACGTTTGTTGGCG+AGG | + | chr4_4:18136601-18136620 | Msa0672760:CDS | 60.0% |
| AAGTCGGTGGGCACGTCTTC+AGG | + | chr4_4:18136685-18136704 | Msa0672760:CDS | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr4_4:18138476-18138495 | Msa0672760:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr4_4:18138592-18138611 | Msa0672760:intron | 60.0% |
| ACCGGGTTGCCCTTTGTGTC+TGG | + | chr4_4:18138642-18138661 | Msa0672760:intron | 60.0% | |
| GCCAGACACAAAGGGCAACC+CGG | - | chr4_4:18138646-18138665 | None:intergenic | 60.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr4_4:18138594-18138613 | None:intergenic | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr4_4:18138607-18138626 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | - | chr4_4:18138608-18138627 | None:intergenic | 65.0% | |
| AGCATACGCAGGGTCCGGGA+AGG | - | chr4_4:18138609-18138628 | None:intergenic | 65.0% | |
| TTCCCGGACCCTGCGTATGC+TGG | + | chr4_4:18138608-18138627 | Msa0672760:intron | 65.0% | |
| CTCCAGCATACGCAGGGTCC+GGG | - | chr4_4:18138613-18138632 | None:intergenic | 65.0% | |
| GCTCCAGCATACGCAGGGTC+CGG | - | chr4_4:18138614-18138633 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 18135088 | 18141273 | 18135088 | ID=Msa0672760;Name=Msa0672760 |
| chr4_4 | mRNA | 18135088 | 18141273 | 18135088 | ID=Msa0672760-mRNA-1;Parent=Msa0672760;Name=Msa0672760-mRNA-1;_AED=0.13;_eAED=0.13;_QI=218|1|1|1|0.88|0.8|10|397|378 |
| chr4_4 | exon | 18135088 | 18135248 | 18135088 | ID=Msa0672760-mRNA-1:exon:5312;Parent=Msa0672760-mRNA-1 |
| chr4_4 | exon | 18136368 | 18136485 | 18136368 | ID=Msa0672760-mRNA-1:exon:5313;Parent=Msa0672760-mRNA-1 |
| chr4_4 | exon | 18136573 | 18136835 | 18136573 | ID=Msa0672760-mRNA-1:exon:5314;Parent=Msa0672760-mRNA-1 |
| chr4_4 | exon | 18136992 | 18137054 | 18136992 | ID=Msa0672760-mRNA-1:exon:5315;Parent=Msa0672760-mRNA-1 |
| chr4_4 | exon | 18137143 | 18137161 | 18137143 | ID=Msa0672760-mRNA-1:exon:5316;Parent=Msa0672760-mRNA-1 |
| chr4_4 | exon | 18137422 | 18137520 | 18137422 | ID=Msa0672760-mRNA-1:exon:5317;Parent=Msa0672760-mRNA-1 |
| chr4_4 | exon | 18137634 | 18137711 | 18137634 | ID=Msa0672760-mRNA-1:exon:5318;Parent=Msa0672760-mRNA-1 |
| chr4_4 | exon | 18137799 | 18138043 | 18137799 | ID=Msa0672760-mRNA-1:exon:5319;Parent=Msa0672760-mRNA-1 |
| chr4_4 | exon | 18139618 | 18139780 | 18139618 | ID=Msa0672760-mRNA-1:exon:5320;Parent=Msa0672760-mRNA-1 |
| chr4_4 | exon | 18140731 | 18141273 | 18140731 | ID=Msa0672760-mRNA-1:exon:5321;Parent=Msa0672760-mRNA-1 |
| chr4_4 | five_prime_UTR | 18135088 | 18135248 | 18135088 | ID=Msa0672760-mRNA-1:five_prime_utr;Parent=Msa0672760-mRNA-1 |
| chr4_4 | five_prime_UTR | 18136368 | 18136424 | 18136368 | ID=Msa0672760-mRNA-1:five_prime_utr;Parent=Msa0672760-mRNA-1 |
| chr4_4 | CDS | 18136425 | 18136485 | 18136425 | ID=Msa0672760-mRNA-1:cds;Parent=Msa0672760-mRNA-1 |
| chr4_4 | CDS | 18136573 | 18136835 | 18136573 | ID=Msa0672760-mRNA-1:cds;Parent=Msa0672760-mRNA-1 |
| chr4_4 | CDS | 18136992 | 18137054 | 18136992 | ID=Msa0672760-mRNA-1:cds;Parent=Msa0672760-mRNA-1 |
| chr4_4 | CDS | 18137143 | 18137161 | 18137143 | ID=Msa0672760-mRNA-1:cds;Parent=Msa0672760-mRNA-1 |
| chr4_4 | CDS | 18137422 | 18137520 | 18137422 | ID=Msa0672760-mRNA-1:cds;Parent=Msa0672760-mRNA-1 |
| chr4_4 | CDS | 18137634 | 18137711 | 18137634 | ID=Msa0672760-mRNA-1:cds;Parent=Msa0672760-mRNA-1 |
| chr4_4 | CDS | 18137799 | 18138043 | 18137799 | ID=Msa0672760-mRNA-1:cds;Parent=Msa0672760-mRNA-1 |
| chr4_4 | CDS | 18139618 | 18139780 | 18139618 | ID=Msa0672760-mRNA-1:cds;Parent=Msa0672760-mRNA-1 |
| chr4_4 | CDS | 18140731 | 18140876 | 18140731 | ID=Msa0672760-mRNA-1:cds;Parent=Msa0672760-mRNA-1 |
| chr4_4 | three_prime_UTR | 18140877 | 18141273 | 18140877 | ID=Msa0672760-mRNA-1:three_prime_utr;Parent=Msa0672760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
