AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0021710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0021710 MtrunA17_Chr1g0173551 98.964 676 5 2 1 676 1 674 0.0 1366
Msa0021710 MtrunA17_Chr4g0040791 42.379 597 326 7 84 667 57 648 4.71e-150 450
Msa0021710 MtrunA17_Chr3g0130991 26.471 544 322 18 53 552 45 554 6.65e-35 141
Msa0021710 MtrunA17_Chr7g0216911 25.254 590 348 20 16 554 7 554 4.13e-33 135
Msa0021710 MtrunA17_Chr7g0231931 37.619 210 119 4 18 221 1 204 4.49e-25 110
Msa0021710 MtrunA17_Chr4g0066951 42.105 133 75 1 81 211 11 143 2.70e-22 102
Msa0021710 MtrunA17_Chr2g0311941 39.103 156 78 3 73 211 7 162 1.95e-21 99.8
Msa0021710 MtrunA17_Chr2g0311931 37.821 156 80 2 73 211 7 162 2.80e-21 99.0
Msa0021710 MtrunA17_Chr1g0170011 37.821 156 80 2 73 211 7 162 2.80e-21 99.0
Msa0021710 MtrunA17_Chr4g0056591 38.068 176 99 2 41 214 57 224 1.70e-20 96.7
Msa0021710 MtrunA17_Chr2g0286711 34.673 199 108 4 38 220 4 196 2.56e-18 89.4
Msa0021710 MtrunA17_Chr4g0065151 35.556 135 79 2 85 211 140 274 9.65e-17 84.7
Msa0021710 MtrunA17_Chr7g0259481 26.578 301 201 9 86 375 65 356 2.41e-14 75.9
Msa0021710 MtrunA17_Chr3g0116821 29.524 210 114 3 3 211 44 220 8.01e-13 71.2
Msa0021710 MtrunA17_Chr2g0312621 28.405 257 152 9 65 319 482 708 1.20e-11 68.2
Msa0021710 MtrunA17_Chr2g0287231 31.746 126 85 1 86 210 18 143 1.30e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0021710 AT5G13650.1 80.000 680 123 6 4 676 1 674 0.0 1115
Msa0021710 AT5G13650.2 79.736 681 124 6 4 676 1 675 0.0 1114
Msa0021710 AT2G31060.2 42.379 597 326 7 84 667 59 650 1.27e-150 452
Msa0021710 AT2G31060.3 42.097 601 326 8 84 667 59 654 2.87e-148 446
Msa0021710 AT2G31060.1 39.726 511 294 6 170 667 1 510 7.93e-112 347
Msa0021710 AT5G08650.2 28.862 492 266 19 82 530 84 534 5.94e-37 147
Msa0021710 AT5G08650.1 28.862 492 266 19 82 530 84 534 1.09e-36 147
Msa0021710 AT5G39900.1 27.495 491 268 18 84 526 66 516 3.89e-33 135
Msa0021710 AT1G45332.1 38.579 197 114 2 32 221 11 207 1.45e-26 115
Msa0021710 AT2G45030.1 38.342 193 112 2 36 221 15 207 8.79e-26 113
Msa0021710 AT3G22980.1 43.846 130 71 1 84 211 9 138 2.85e-23 105
Msa0021710 AT3G22980.3 43.846 130 71 1 84 211 9 138 2.85e-23 105
Msa0021710 AT3G22980.2 43.846 130 71 1 84 211 9 138 2.85e-23 105
Msa0021710 AT3G12915.2 39.103 156 78 3 73 211 7 162 2.66e-22 102
Msa0021710 AT1G56070.3 36.943 157 82 2 72 211 6 162 5.38e-21 98.6
Msa0021710 AT1G56070.2 36.943 157 82 2 72 211 6 162 5.38e-21 98.6
Msa0021710 AT1G56070.1 36.943 157 82 2 72 211 6 162 5.38e-21 98.6
Msa0021710 AT1G62750.1 36.946 203 112 4 76 262 88 290 1.60e-19 94.0
Msa0021710 AT1G06220.1 35.507 138 81 2 82 211 136 273 1.88e-18 90.5
Msa0021710 AT1G06220.3 35.507 138 81 2 82 211 136 273 1.88e-18 90.5
Msa0021710 AT1G06220.2 35.507 138 81 2 82 211 136 273 1.88e-18 90.5
Msa0021710 AT5G25230.2 33.333 138 84 2 82 211 122 259 9.04e-17 85.1
Msa0021710 AT5G25230.1 33.333 138 84 2 82 211 122 259 9.04e-17 85.1
Msa0021710 AT4G02930.1 28.452 239 160 5 86 318 69 302 9.64e-14 74.3
Msa0021710 AT4G20360.1 24.299 321 223 7 75 382 70 383 8.50e-12 68.6
Msa0021710 AT4G20360.2 24.299 321 223 7 75 382 70 383 8.50e-12 68.6
Msa0021710 AT4G11160.3 27.459 244 148 9 87 330 222 436 4.19e-11 66.6
Msa0021710 AT4G11160.1 26.639 244 150 8 87 330 220 434 7.79e-11 65.9
Msa0021710 AT4G11160.2 26.639 244 150 8 87 330 222 436 8.07e-11 65.9

Find 222 sgRNAs with CRISPR-Local

Find 529 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCCTTTCTTTGCAAATTT+TGG 0.054117 1_1:+39039576 None:intergenic
TGTTGGAAAATACCAATATT+TGG 0.093492 1_1:-39039229 Msa0021710:three_prime_UTR
GCAATTGTTCACATTGATTT+TGG 0.135123 1_1:-39039392 Msa0021710:three_prime_UTR
ACTCCAGGTCACTCTGATTT+TGG 0.148248 1_1:-39044954 Msa0021710:CDS
TTCTAGGTTGCTTTCGAAAA+TGG 0.150332 1_1:-39040637 Msa0021710:intron
ATGTTACCAGTAGGAATTTA+AGG 0.193659 1_1:-39042768 Msa0021710:CDS
GTTTATAAAGGTCAAATTAT+TGG 0.229789 1_1:-39040544 Msa0021710:CDS
ATATATGCAAGTGGTATAAA+AGG 0.233084 1_1:-39044268 Msa0021710:CDS
CCTCTACTAGTTCATCTTCT+TGG 0.242132 1_1:+39039631 None:intergenic
CTTCAACATTCTTATACTTT+GGG 0.253446 1_1:+39039602 None:intergenic
AACAAAAGGCGATGTGTTTA+TGG 0.254428 1_1:+39042995 None:intergenic
GAAAGAAAGATGAGGGATAT+TGG 0.261969 1_1:+39046207 None:intergenic
TCTTCAACATTCTTATACTT+TGG 0.271933 1_1:+39039601 None:intergenic
GGATCTGTTGTTGAACTTCT+TGG 0.275513 1_1:-39041687 Msa0021710:CDS
ATATCTTATGTTAAATTTGT+TGG 0.288424 1_1:-39039246 Msa0021710:three_prime_UTR
CTCACCTGATTGTTCCTTGT+TGG 0.290425 1_1:+39040453 None:intergenic
TCCAACAGCCTTGGATTGTT+TGG 0.297861 1_1:+39038907 None:intergenic
ACCTTCTTGTTGATAACTTT+GGG 0.301858 1_1:+39042516 None:intergenic
TTGAAGAAGGCTTTAGAGTT+TGG 0.304305 1_1:-39044611 Msa0021710:CDS
CCTGCTCAAAGGGTGGAGGC+TGG 0.310780 1_1:-39043214 Msa0021710:CDS
TGTTGGTTCTTCCACTTTGA+TGG 0.317235 1_1:+39043034 None:intergenic
AGGTCGTCTGCCAGATCTTC+AGG 0.317566 1_1:+39044229 None:intergenic
CTCATGATTGATTCAAATAA+TGG 0.322386 1_1:+39044202 None:intergenic
GTTGGAAAATACCAATATTT+GGG 0.327385 1_1:-39039228 Msa0021710:three_prime_UTR
TCTTCGATTCCTATGGGCCT+TGG 0.327869 1_1:-39040798 Msa0021710:CDS
AATAAACGTAACAAGCTCTT+TGG 0.328486 1_1:-39046038 Msa0021710:CDS
AACCTTCTTGTTGATAACTT+TGG 0.332209 1_1:+39042515 None:intergenic
ATGTGGAATTTCTGATGTTC+AGG 0.340072 1_1:-39043176 Msa0021710:intron
GCCATCTGACCATTTGCTTA+TGG 0.342843 1_1:+39039177 None:intergenic
GATAATGGACTCTAATGATT+TGG 0.343442 1_1:-39045054 Msa0021710:CDS
ATCCCAACCCGTGGCCTACT+TGG 0.349511 1_1:-39040874 Msa0021710:CDS
CTGCTCAAAGGGTGGAGGCT+GGG 0.350356 1_1:-39043213 Msa0021710:CDS
TCGTGAACTTGAGCGAAATC+TGG 0.352265 1_1:-39042734 Msa0021710:CDS
AGAGTGAGTGAGTGAGTTAA+GGG 0.354589 1_1:-39046156 Msa0021710:five_prime_UTR
GGCACTAGAATGTTTGCTCT+TGG 0.355483 1_1:-39038974 Msa0021710:three_prime_UTR
GCACTAGAATGTTTGCTCTT+GGG 0.365016 1_1:-39038973 Msa0021710:three_prime_UTR
AGTGAGTGAGTTAAGGGAAA+TGG 0.366884 1_1:-39046150 Msa0021710:exon
GTAGAATTGACGACAAAATC+AGG 0.368319 1_1:+39044539 None:intergenic
TACACCATTGGATTACAGTT+TGG 0.370552 1_1:-39039673 Msa0021710:CDS
GTTAAGGGAAATGGAGAAAA+TGG 0.370922 1_1:-39046141 Msa0021710:exon
ACTCGGACCAACCCAAATAT+TGG 0.373758 1_1:+39039217 None:intergenic
GAGAGTGAGTGAGTGAGTTA+AGG 0.381718 1_1:-39046157 Msa0021710:five_prime_UTR
CCAGTTAACATATGTCAAAA+TGG 0.383412 1_1:+39039019 None:intergenic
CTGAAACTGCAGAATAATAT+AGG 0.383430 1_1:-39039442 Msa0021710:three_prime_UTR
GACATGAGTACTCGGGATTT+AGG 0.387481 1_1:-39040769 Msa0021710:CDS
AACAACTACTAACAAGCATT+TGG 0.388728 1_1:+39044140 None:intergenic
CCTTTATAAACTTCCGCTCC+TGG 0.389364 1_1:+39040556 None:intergenic
TCATACATGAGTTAGTTATC+TGG 0.389858 1_1:+39038931 None:intergenic
ACAAGTCCCCAGGGCGTTGA+TGG 0.390112 1_1:+39040518 None:intergenic
CAACTCTTCGAATTGCTTCA+AGG 0.391660 1_1:-39045992 Msa0021710:CDS
CTTCGATTCCTATGGGCCTT+GGG 0.393022 1_1:-39040797 Msa0021710:CDS
AGTATCAATTATATTAATCT+TGG 0.393588 1_1:+39044974 None:intergenic
CGAACATTTGCCCTCGTCTC+TGG 0.394702 1_1:+39041664 None:intergenic
CATAAAGGACGTATAGCAAT+TGG 0.396243 1_1:-39043681 Msa0021710:CDS
AGTTGGTTTGGAAGAAGATA+AGG 0.397431 1_1:+39046010 None:intergenic
TTGTAGGTAGATTCTGTTGA+AGG 0.404210 1_1:-39044659 Msa0021710:intron
CTTTCGGGTTCCTGCTCAAA+GGG 0.408582 1_1:-39043224 Msa0021710:CDS
GGGCAGATGTTTGTTGGTCC+AGG 0.410368 1_1:-39040574 Msa0021710:CDS
TGCTCAAAGGGTGGAGGCTG+GGG 0.412757 1_1:-39043212 Msa0021710:CDS
AACACTATCTTCGATTCCTA+TGG 0.413506 1_1:-39040805 Msa0021710:CDS
AACTGTACAAGAAAGGATAA+TGG 0.414108 1_1:-39045069 Msa0021710:CDS
GTCACAGAAGAGCCTAAAAC+TGG 0.417717 1_1:-39045936 Msa0021710:intron
ACCGAGTACGAGGGACATAA+AGG 0.419215 1_1:-39043696 Msa0021710:CDS
ATCTTTGTCGGAGAACTTGT+TGG 0.423694 1_1:+39039096 None:intergenic
GTTGGTTTGGAAGAAGATAA+GGG 0.425798 1_1:+39046011 None:intergenic
AAGATCTGGCAGACGACCTT+GGG 0.426047 1_1:-39044225 Msa0021710:CDS
GGAGGTACCGGAAGAGCATA+TGG 0.426327 1_1:-39041709 Msa0021710:CDS
ACAAATCTTGTCTGTGGCAT+TGG 0.427741 1_1:+39044635 None:intergenic
AGCAATTCGAAGAGTTGGTT+TGG 0.430850 1_1:+39045998 None:intergenic
TTTGTAAAGTCATTTATTAA+CGG 0.430944 1_1:-39039336 Msa0021710:three_prime_UTR
ATCAAAATACCAATTGTTCA+TGG 0.431604 1_1:-39039305 Msa0021710:three_prime_UTR
ACATTCAAGGACAAGTCCCC+AGG 0.433072 1_1:+39040508 None:intergenic
CCAGGAGCGGAAGTTTATAA+AGG 0.433726 1_1:-39040556 Msa0021710:CDS
GATTCCTATGGGCCTTGGGC+TGG 0.434988 1_1:-39040793 Msa0021710:CDS
AATTAAAGGTTTACCTCATA+CGG 0.437885 1_1:+39042474 None:intergenic
AGGGTTGTCTCCTGAAGATC+TGG 0.440839 1_1:-39044239 Msa0021710:CDS
GACAAGATTTGTCTTGAAGA+AGG 0.440993 1_1:-39044624 Msa0021710:CDS
GCAATTGGGCGCTTGGAAGC+TGG 0.442418 1_1:-39043666 Msa0021710:CDS
GAATATGCATTAATCTTTGT+CGG 0.442968 1_1:+39039084 None:intergenic
ACAGATCCCATATGCTCTTC+CGG 0.443323 1_1:+39041702 None:intergenic
ATGGCAAAATCCAACAGCCT+TGG 0.444277 1_1:+39038898 None:intergenic
CCAGTAGGAATTTAAGGGAC+AGG 0.445617 1_1:-39042762 Msa0021710:CDS
TCCTTTATGTCCCTCGTACT+CGG 0.445724 1_1:+39043695 None:intergenic
AATCCAAAATTTGCAAAGAA+AGG 0.449205 1_1:-39039579 Msa0021710:CDS
ACTAAATGCAACAGATGAAC+AGG 0.451963 1_1:-39044498 Msa0021710:intron
GGGCTGTAGTTCTGTGAATG+AGG 0.453028 1_1:-39038997 Msa0021710:three_prime_UTR
TTACGTTTATTGAAGAAAAG+TGG 0.457749 1_1:+39046050 None:intergenic
ATAATCATACCATGAACAAT+TGG 0.458504 1_1:+39039296 None:intergenic
TGTTACCAGTAGGAATTTAA+GGG 0.459060 1_1:-39042767 Msa0021710:CDS
TCTTTATCAATACGCGGTCC+AGG 0.459436 1_1:+39044172 None:intergenic
ATCCAAGTAGGCCACGGGTT+GGG 0.460594 1_1:+39040872 None:intergenic
GACCATTTGCTTATGGCGTA+TGG 0.467188 1_1:+39039184 None:intergenic
AGTAGAGCGCATCTTGAATA+TGG 0.469516 1_1:-39044925 Msa0021710:CDS
TGCTATGCTCAAACAAACTA+AGG 0.470198 1_1:-39045744 Msa0021710:intron
CTTGAAGCAATTCGAAGAGT+TGG 0.474531 1_1:+39045993 None:intergenic
TTGGGTTGGTCCGAGTGGTA+AGG 0.476173 1_1:-39039210 Msa0021710:three_prime_UTR
TATATGCAAGTGGTATAAAA+GGG 0.478105 1_1:-39044267 Msa0021710:CDS
AAAGAGAGAAAGAAAGATGA+GGG 0.478395 1_1:+39046200 None:intergenic
CAAAGTGTTGGAGCCGTATG+AGG 0.479972 1_1:-39042487 Msa0021710:intron
ACGTATAGCAATTGGGCGCT+TGG 0.485428 1_1:-39043673 Msa0021710:CDS
ACATTCATTGTCAGTGGACG+TGG 0.491286 1_1:-39042679 Msa0021710:CDS
AAAGTCATTTATTAACGGTA+AGG 0.492618 1_1:-39039331 Msa0021710:three_prime_UTR
ATAATATAGGAGTTGGCAAA+AGG 0.494687 1_1:-39039429 Msa0021710:three_prime_UTR
GGGCTGGTGACATGAGTACT+CGG 0.495472 1_1:-39040777 Msa0021710:CDS
TGTTCGACATGCAAGGAGTT+GGG 0.496095 1_1:-39041647 Msa0021710:intron
ATGTTCGACATGCAAGGAGT+TGG 0.497165 1_1:-39041648 Msa0021710:CDS
GAAGATCTGGCAGACGACCT+TGG 0.497506 1_1:-39044226 Msa0021710:CDS
CCTGTCCCTTAAATTCCTAC+TGG 0.498060 1_1:+39042762 None:intergenic
ATCTGGTATGTTGCTTGAGA+AGG 0.498220 1_1:+39038948 None:intergenic
TTATGCAATCGCGAGTTCAC+AGG 0.499791 1_1:-39040602 Msa0021710:CDS
GAAAATACCAATATTTGGGT+TGG 0.502739 1_1:-39039224 Msa0021710:three_prime_UTR
TTCAACATTCTTATACTTTG+GGG 0.503618 1_1:+39039603 None:intergenic
CTGCAGAATAATATAGGAGT+TGG 0.506014 1_1:-39039436 Msa0021710:three_prime_UTR
GAAATGAATATGTGAGGCTA+TGG 0.506314 1_1:+39046231 None:intergenic
AAGGGAAGGATACGAATTCA+TGG 0.506558 1_1:-39042547 Msa0021710:CDS
GGCTGTAGTTCTGTGAATGA+GGG 0.507682 1_1:-39038996 Msa0021710:three_prime_UTR
CGTTCCAACAAGGAACAATC+AGG 0.509487 1_1:-39040457 Msa0021710:intron
GATTGCAACTGTGGAGGTAC+CGG 0.509796 1_1:-39041721 Msa0021710:CDS
ATACTCTACTTTGTGTTGTG+TGG 0.510689 1_1:+39046325 None:intergenic
TGAGCGAAATCTGGCTATGA+AGG 0.513710 1_1:-39042725 Msa0021710:CDS
TTGGCATCCATCAACGCCCT+GGG 0.514308 1_1:-39040525 Msa0021710:CDS
ATCCATACGCCATAAGCAAA+TGG 0.516580 1_1:-39039186 Msa0021710:three_prime_UTR
TCAACATTCTTATACTTTGG+GGG 0.516909 1_1:+39039604 None:intergenic
TTGGGATCTTATATTTGAGT+AGG 0.517140 1_1:+39040890 None:intergenic
TACTCGGGATTTAGGCTCGC+TGG 0.517987 1_1:-39040761 Msa0021710:intron
CCAGCCTCCACCCTTTGAGC+AGG 0.518468 1_1:+39043214 None:intergenic
TGGGTTGGTCCGAGTGGTAA+GGG 0.521124 1_1:-39039209 Msa0021710:three_prime_UTR
GGTTCTTCCACTTTGATGGA+AGG 0.523514 1_1:+39043038 None:intergenic
ATAATCAAACTGTACAAGAA+AGG 0.526603 1_1:-39045076 Msa0021710:CDS
ACAATTGCGGATAAATTGAC+TGG 0.526829 1_1:-39043071 Msa0021710:CDS
AGTGGTATAAAAGGGAAAGC+AGG 0.527008 1_1:-39044259 Msa0021710:CDS
ACCAAACAATCCAAGGCTGT+TGG 0.529438 1_1:-39038908 Msa0021710:three_prime_UTR
CATACCTCACGACCAACAAA+AGG 0.530483 1_1:+39042981 None:intergenic
ATTGGCATCCATCAACGCCC+TGG 0.530961 1_1:-39040526 Msa0021710:CDS
AAGGATACGAATTCATGGTT+GGG 0.532151 1_1:-39042542 Msa0021710:CDS
CAAAATTTGCAAAGAAAGGA+AGG 0.532850 1_1:-39039575 Msa0021710:CDS
AAAAGAGAGAAAGAAAGATG+AGG 0.538157 1_1:+39046199 None:intergenic
TCATACACAATAGCTAGGGA+TGG 0.539235 1_1:+39039154 None:intergenic
AATGATTTGGAGCGTGAAAG+AGG 0.539302 1_1:-39045041 Msa0021710:CDS
CAACATTCTTATACTTTGGG+GGG 0.544944 1_1:+39039605 None:intergenic
TACTCTACTTTGTGTTGTGT+GGG 0.545586 1_1:+39046326 None:intergenic
AACAATTGCTATGATGAATA+CGG 0.547065 1_1:+39039406 None:intergenic
TCTTTCGGGTTCCTGCTCAA+AGG 0.547736 1_1:-39043225 Msa0021710:CDS
TGTAGGTAGATTCTGTTGAA+GGG 0.549219 1_1:-39044658 Msa0021710:intron
ATTGTTGCTCATGTTGATCA+TGG 0.551705 1_1:-39045785 Msa0021710:CDS
AATCGCGAGTTCACAGGAGA+GGG 0.552488 1_1:-39040596 Msa0021710:CDS
ATAAAGGACGTATAGCAATT+GGG 0.553689 1_1:-39043680 Msa0021710:CDS
GAAGGATACGAATTCATGGT+TGG 0.553691 1_1:-39042543 Msa0021710:CDS
TGTTGAGGATAGCTGTCCCT+CGG 0.556527 1_1:+39040824 None:intergenic
TCCGCAATCCAAGTAGGCCA+CGG 0.557206 1_1:+39040866 None:intergenic
AGTGATTCTTGATACACCAT+TGG 0.560006 1_1:-39039685 Msa0021710:CDS
GGTTCCTGCTCAAAGGGTGG+AGG 0.560933 1_1:-39043218 Msa0021710:CDS
GAACTTCTTGGCCAGAGACG+AGG 0.562966 1_1:-39041675 Msa0021710:CDS
GTTGAGGATAGCTGTCCCTC+GGG 0.569162 1_1:+39040825 None:intergenic
AATCCAAGTAGGCCACGGGT+TGG 0.570599 1_1:+39040871 None:intergenic
GGCTTTAGAGTTTGGCCATG+CGG 0.573945 1_1:-39044603 Msa0021710:CDS
TTCAAGACAAATCTTGTCTG+TGG 0.575760 1_1:+39044629 None:intergenic
TCGGGTTCCTGCTCAAAGGG+TGG 0.576216 1_1:-39043221 Msa0021710:CDS
TGCGGATAAATTGACTGGAA+AGG 0.576370 1_1:-39043066 Msa0021710:CDS
AAATACTAGTGGTACACGAA+TGG 0.577464 1_1:+39046297 None:intergenic
GCAATCTTCAGGCGAAGGGA+AGG 0.577717 1_1:-39042561 Msa0021710:intron
TGGTTGTGAATAAAATAGAC+AGG 0.579197 1_1:-39044574 Msa0021710:CDS
CATACACAATAGCTAGGGAT+GGG 0.580132 1_1:+39039155 None:intergenic
TCCCAAAGTTATCAACAAGA+AGG 0.580611 1_1:-39042517 Msa0021710:CDS
ATTAATATAATTGATACTCC+AGG 0.580966 1_1:-39044969 Msa0021710:CDS
GAAGGTTGATGACAAAGTGT+TGG 0.581806 1_1:-39042499 Msa0021710:CDS
ACACTATCTTCGATTCCTAT+GGG 0.582956 1_1:-39040804 Msa0021710:CDS
CTTTATCAATACGCGGTCCA+GGG 0.583068 1_1:+39044173 None:intergenic
CCGCAATCCAAGTAGGCCAC+GGG 0.583579 1_1:+39040867 None:intergenic
GGACCGCGTATTGATAAAGA+TGG 0.583967 1_1:-39044169 Msa0021710:CDS
GGCACTACCTTCCATCAAAG+TGG 0.586158 1_1:-39043045 Msa0021710:CDS
GCCATAAGCAAATGGTCAGA+TGG 0.586306 1_1:-39039178 Msa0021710:three_prime_UTR
GTTTGGCCATGCGGTTGTTG+TGG 0.587191 1_1:-39044594 Msa0021710:CDS
CGCATCTTGAATATGGTCGA+AGG 0.588221 1_1:-39044918 Msa0021710:CDS
TTCTTGTTGATAACTTTGGG+AGG 0.588955 1_1:+39042519 None:intergenic
GGGGATATATGTGCAGTATG+TGG 0.590849 1_1:-39043193 Msa0021710:CDS
TCAATCATGAGATGTATCCC+TGG 0.590855 1_1:-39044190 Msa0021710:CDS
TCGCGAGTTCACAGGAGAGG+GGG 0.591212 1_1:-39040594 Msa0021710:CDS
GGCTGGTGACATGAGTACTC+GGG 0.593870 1_1:-39040776 Msa0021710:CDS
GGGCAAATGTTCGACATGCA+AGG 0.595436 1_1:-39041654 Msa0021710:CDS
TCCACTGACAATGAATGTAT+CGG 0.597703 1_1:+39042684 None:intergenic
CGTATGGATCCCTTACCACT+CGG 0.598020 1_1:+39039200 None:intergenic
GCCGATACATTCATTGTCAG+TGG 0.599312 1_1:-39042685 Msa0021710:CDS
AACTTCTTGGCCAGAGACGA+GGG 0.600321 1_1:-39041674 Msa0021710:CDS
TTGCATTCCGCAATCCAAGT+AGG 0.603209 1_1:+39040860 None:intergenic
TATTGCAATCTTCAGGCGAA+GGG 0.603345 1_1:-39042565 Msa0021710:intron
TAGAATTGACGACAAAATCA+GGG 0.606458 1_1:+39044540 None:intergenic
GATGTTTGTTGGTCCAGGAG+CGG 0.610038 1_1:-39040569 Msa0021710:CDS
GCTGTAGTTCTGTGAATGAG+GGG 0.610911 1_1:-39038995 Msa0021710:three_prime_UTR
TGTATGAACCAAACAATCCA+AGG 0.610955 1_1:-39038915 Msa0021710:three_prime_UTR
GAGAACTTGTTGGACACACA+AGG 0.611843 1_1:+39039106 None:intergenic
CCAAGAAGATGAACTAGTAG+AGG 0.612810 1_1:-39039631 Msa0021710:CDS
ATCGCGAGTTCACAGGAGAG+GGG 0.613743 1_1:-39040595 Msa0021710:CDS
TCAGATTGGGGAGACAATTG+CGG 0.613867 1_1:-39043084 Msa0021710:intron
GGTTACAAGTACCGAGTACG+AGG 0.616452 1_1:-39043706 Msa0021710:CDS
GTGGTATAAAAGGGAAAGCA+GGG 0.617368 1_1:-39044258 Msa0021710:CDS
AGGGAAAGTATGTTACCAGT+AGG 0.622365 1_1:-39042777 Msa0021710:CDS
CTGGCTATGAAGGTTGAAGA+TGG 0.624559 1_1:-39042715 Msa0021710:CDS
GAGGTACCGGAAGAGCATAT+GGG 0.628156 1_1:-39041708 Msa0021710:CDS
TCATCCAAACTGTAATCCAA+TGG 0.628381 1_1:+39039669 None:intergenic
ATGGTTGCAGATTGCAACTG+TGG 0.628451 1_1:-39041730 Msa0021710:intron
GTCACCAGCCCAAGGCCCAT+AGG 0.632808 1_1:+39040789 None:intergenic
GTACTCATGTCACCAGCCCA+AGG 0.634132 1_1:+39040781 None:intergenic
ATATCTACATGAATCTTCTG+AGG 0.638688 1_1:+39043282 None:intergenic
ATTGGAGAAATGAATATGTG+AGG 0.640414 1_1:+39046225 None:intergenic
AATATTTGGGTTGGTCCGAG+TGG 0.641662 1_1:-39039215 Msa0021710:three_prime_UTR
CAATCGCGAGTTCACAGGAG+AGG 0.641720 1_1:-39040597 Msa0021710:CDS
AACGAACATACGTTCCAACA+AGG 0.641986 1_1:-39040467 Msa0021710:CDS
TGTTTGAAATGAAATACTAG+TGG 0.647492 1_1:+39046286 None:intergenic
CATTCAAGGACAAGTCCCCA+GGG 0.647653 1_1:+39040509 None:intergenic
TTGATTCAAATAATGGCCCA+AGG 0.650931 1_1:+39044209 None:intergenic
TTTCAGGTAATATATGCAAG+TGG 0.656872 1_1:-39044277 Msa0021710:CDS
TCACAACCACAACAACCGCA+TGG 0.657590 1_1:+39044588 None:intergenic
CCCGTGGCCTACTTGGATTG+CGG 0.663527 1_1:-39040867 Msa0021710:CDS
GGTCGAAGGAATTCTTCTAG+TGG 0.666692 1_1:-39044904 Msa0021710:intron
AGGAATCGAAGATAGTGTTG+AGG 0.679299 1_1:+39040809 None:intergenic
AAATATAAGATCCCAACCCG+TGG 0.705474 1_1:-39040883 Msa0021710:CDS
GAGCCATCTTTATCAATACG+CGG 0.720983 1_1:+39044166 None:intergenic
TGGCATCCATCAACGCCCTG+GGG 0.724939 1_1:-39040524 Msa0021710:CDS
GTTACAAGTACCGAGTACGA+GGG 0.725606 1_1:-39043705 Msa0021710:CDS
GTTGCAGATTGCAACTGTGG+AGG 0.753115 1_1:-39041727 Msa0021710:intron
TCTGCTTCACAGAATCACAG+TGG 0.756607 1_1:+39039545 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTGAACAATAAAAATAA+AGG + chr1_1:39041634-39041653 None:intergenic 10.0%
!!! ATAACAAATAAATTTTTTCT+CGG - chr1_1:39041733-39041752 Msa0021710:intron 10.0%
!! AATTCAAAAAAAAATGTAAA+TGG + chr1_1:39045359-39045378 None:intergenic 10.0%
!! TATATTACTTGAGTAAATTA+AGG + chr1_1:39039935-39039954 None:intergenic 15.0%
!! TAATTTACTCAAGTAATATA+CGG - chr1_1:39039935-39039954 Msa0021710:intron 15.0%
!! TTCTAACAGTTTATTTATTT+GGG - chr1_1:39040058-39040077 Msa0021710:intron 15.0%
!! AGTATCAATTATATTAATCT+TGG + chr1_1:39040260-39040279 None:intergenic 15.0%
!!! ACATATCATTTGAATTTTAA+AGG - chr1_1:39040880-39040899 Msa0021710:CDS 15.0%
!!! TGGTATTTTAAAATGTTTTA+TGG + chr1_1:39041398-39041417 None:intergenic 15.0%
!! AACAATAAAAATAAAGGAAA+AGG + chr1_1:39041628-39041647 None:intergenic 15.0%
!!! TACAAATAGAAGATTTTTTT+TGG + chr1_1:39042301-39042320 None:intergenic 15.0%
!!! TAAAGCAATTTTTAGAAATT+TGG - chr1_1:39043687-39043706 Msa0021710:CDS 15.0%
!! TACATAATTATACTAATGTA+CGG + chr1_1:39043774-39043793 None:intergenic 15.0%
!! AAAAATATTAAGAAAAAGTG+TGG + chr1_1:39043913-39043932 None:intergenic 15.0%
!!! AACTTTTTCTTAATATTGTT+AGG - chr1_1:39043941-39043960 Msa0021710:intron 15.0%
!!! CTTTAACTGTTTTTTTTTTT+GGG + chr1_1:39044902-39044921 None:intergenic 15.0%
!!! ACTTTAACTGTTTTTTTTTT+TGG + chr1_1:39044903-39044922 None:intergenic 15.0%
!! TTTGTAAAGTCATTTATTAA+CGG - chr1_1:39045895-39045914 Msa0021710:intron 15.0%
!! ATATCTTATGTTAAATTTGT+TGG - chr1_1:39045985-39046004 Msa0021710:CDS 15.0%
!! AAGAATATACAAAAAATTCT+AGG + chr1_1:39046188-39046207 None:intergenic 15.0%
!!! TTTGTTTTGATTGAATTTGT+TGG - chr1_1:39039368-39039387 Msa0021710:three_prime_UTR 20.0%
!!! TTATAAAGTCAATTTTCGTA+TGG - chr1_1:39039553-39039572 Msa0021710:exon 20.0%
!! CTTCTAACAGTTTATTTATT+TGG - chr1_1:39040057-39040076 Msa0021710:intron 20.0%
!!! TTGATGATGTGATATATTTA+TGG - chr1_1:39040110-39040129 Msa0021710:intron 20.0%
!!! TGATGATGTGATATATTTAT+GGG - chr1_1:39040111-39040130 Msa0021710:intron 20.0%
!! ATTAATATAATTGATACTCC+AGG - chr1_1:39040262-39040281 Msa0021710:intron 20.0%
!!! CTTAAATATGTTTTCATTCA+TGG + chr1_1:39040464-39040483 None:intergenic 20.0%
!!! TCCTTTTAATATCAAAAATG+TGG - chr1_1:39040498-39040517 Msa0021710:CDS 20.0%
!! AAATGAAATCAATAGAACAA+TGG + chr1_1:39041146-39041165 None:intergenic 20.0%
!!! TTTACCAAAACCTATAATTT+TGG + chr1_1:39041375-39041394 None:intergenic 20.0%
!! AATGAAAAATGAGAGTTTAT+TGG + chr1_1:39041418-39041437 None:intergenic 20.0%
!! GTAATGCAAAATTGAAATTA+AGG + chr1_1:39041842-39041861 None:intergenic 20.0%
!! GCAATATTATTTGAAGAAAT+TGG + chr1_1:39042652-39042671 None:intergenic 20.0%
!!! GACACAAAATTTTCAATTAA+AGG + chr1_1:39042774-39042793 None:intergenic 20.0%
!! ATGTAATTACACAATAGATT+AGG + chr1_1:39042982-39043001 None:intergenic 20.0%
!!! TTTTAATAACACAAAAGGAT+GGG + chr1_1:39043015-39043034 None:intergenic 20.0%
!!! AGCTTCTAATTACATTTTAT+TGG - chr1_1:39043101-39043120 Msa0021710:intron 20.0%
!!! GCTTCTAATTACATTTTATT+GGG - chr1_1:39043102-39043121 Msa0021710:intron 20.0%
!! TATTCCTAAGTTAATAGAAA+TGG + chr1_1:39043379-39043398 None:intergenic 20.0%
!! ACATAATTATACTAATGTAC+GGG + chr1_1:39043773-39043792 None:intergenic 20.0%
!! TCAATATCAATATAAAACAC+AGG + chr1_1:39044003-39044022 None:intergenic 20.0%
!!! TGATGATTTCATTGTTTTTT+TGG - chr1_1:39044300-39044319 Msa0021710:intron 20.0%
!! GTTTATAAAGGTCAAATTAT+TGG - chr1_1:39044687-39044706 Msa0021710:intron 20.0%
!! GCTATTATGTGATAATAAAT+TGG + chr1_1:39045008-39045027 None:intergenic 20.0%
!!! TTACTTGGTAATTCATTTTA+AGG - chr1_1:39045078-39045097 Msa0021710:CDS 20.0%
!! ATATATACGAAATTGTTGAA+TGG - chr1_1:39045125-39045144 Msa0021710:intron 20.0%
!! TGTTTGAAATGAAATACTAG+TGG + chr1_1:39038948-39038967 None:intergenic 25.0%
! TTACGTTTATTGAAGAAAAG+TGG + chr1_1:39039184-39039203 None:intergenic 25.0%
!! TGTGAAAAATTACCAGTTTT+AGG + chr1_1:39039310-39039329 None:intergenic 25.0%
!! TTCTTAGTGTTTAGATTTTG+TGG - chr1_1:39039341-39039360 Msa0021710:three_prime_UTR 25.0%
!! TCTTAGTGTTTAGATTTTGT+GGG - chr1_1:39039342-39039361 Msa0021710:three_prime_UTR 25.0%
! ACAAAAAAAACAGTACTTAC+GGG + chr1_1:39039580-39039599 None:intergenic 25.0%
! CACAAAAAAAACAGTACTTA+CGG + chr1_1:39039581-39039600 None:intergenic 25.0%
!! TTATTGTAATTTGTATCGCT+AGG - chr1_1:39039877-39039896 Msa0021710:intron 25.0%
! AGTTTATTTATTTGGGAGAA+AGG - chr1_1:39040065-39040084 Msa0021710:intron 25.0%
! ATAATCAAACTGTACAAGAA+AGG - chr1_1:39040155-39040174 Msa0021710:intron 25.0%
!! GCCACATTTTTGATATTAAA+AGG + chr1_1:39040502-39040521 None:intergenic 25.0%
! GTTAAGATTTCAAATCTTGT+TGG - chr1_1:39040849-39040868 Msa0021710:CDS 25.0%
! ATATATGCAAGTGGTATAAA+AGG - chr1_1:39040963-39040982 Msa0021710:intron 25.0%
! TATATGCAAGTGGTATAAAA+GGG - chr1_1:39040964-39040983 Msa0021710:intron 25.0%
!! CTCATGATTGATTCAAATAA+TGG + chr1_1:39041032-39041051 None:intergenic 25.0%
! TTGTTTATCATATTGCTTCT+CGG - chr1_1:39041109-39041128 Msa0021710:intron 25.0%
! CATAAATGATCATGTCTATA+AGG + chr1_1:39041327-39041346 None:intergenic 25.0%
! ATGATCATTTATGAAGTTTG+TGG - chr1_1:39041334-39041353 Msa0021710:intron 25.0%
! TGATCATTTATGAAGTTTGT+GGG - chr1_1:39041335-39041354 Msa0021710:intron 25.0%
! GCTATTTAGTCCAAAATTAT+AGG - chr1_1:39041362-39041381 Msa0021710:intron 25.0%
!! TAGTCCAAAATTATAGGTTT+TGG - chr1_1:39041368-39041387 Msa0021710:intron 25.0%
!! TCAATTTTGCATTACCATTT+TGG - chr1_1:39041847-39041866 Msa0021710:intron 25.0%
! AAATCATCATTTAAGTGGTA+AGG + chr1_1:39041916-39041935 None:intergenic 25.0%
! ACGTGTATGAAAAATTCTTT+CGG - chr1_1:39041991-39042010 Msa0021710:intron 25.0%
!!! GAATTTTAATGGCTATGTTA+AGG + chr1_1:39042129-39042148 None:intergenic 25.0%
! ATAGCCATTAAAATTCAGAT+TGG - chr1_1:39042133-39042152 Msa0021710:intron 25.0%
! TAGCCATTAAAATTCAGATT+GGG - chr1_1:39042134-39042153 Msa0021710:intron 25.0%
!!! AGTACAAAATAAGTTTTAGC+TGG + chr1_1:39042430-39042449 None:intergenic 25.0%
!!! AAACTTATTTTGTACTTTCC+AGG - chr1_1:39042434-39042453 Msa0021710:intron 25.0%
!!! AACTTATTTTGTACTTTCCA+GGG - chr1_1:39042435-39042454 Msa0021710:intron 25.0%
! CAAATAATATTGCAATCTTC+AGG - chr1_1:39042659-39042678 Msa0021710:CDS 25.0%
! AATTAAAGGTTTACCTCATA+CGG + chr1_1:39042760-39042779 None:intergenic 25.0%
! ATTACACAATAGATTAGGAT+AGG + chr1_1:39042977-39042996 None:intergenic 25.0%
!! CTTTTAATAACACAAAAGGA+TGG + chr1_1:39043016-39043035 None:intergenic 25.0%
!! TGTGCTTTTAATAACACAAA+AGG + chr1_1:39043020-39043039 None:intergenic 25.0%
! AAGCACATGAATATTTATGA+TGG - chr1_1:39043033-39043052 Msa0021710:CDS 25.0%
! GTAATTAGAAGCTAATGTTT+GGG + chr1_1:39043094-39043113 None:intergenic 25.0%
! TGTAATTAGAAGCTAATGTT+TGG + chr1_1:39043095-39043114 None:intergenic 25.0%
! AGGATATTACAGTTAAATAC+AGG - chr1_1:39043341-39043360 Msa0021710:intron 25.0%
! CTTTCCATTTCTATTAACTT+AGG - chr1_1:39043372-39043391 Msa0021710:intron 25.0%
!! TTATTGCAAAAGACGTATTT+TGG - chr1_1:39043739-39043758 Msa0021710:intron 25.0%
! TTCTCAAGAGATTAGAATAT+AGG + chr1_1:39044030-39044049 None:intergenic 25.0%
! ATATTCTAATCTCTTGAGAA+AGG - chr1_1:39044030-39044049 Msa0021710:intron 25.0%
! TTAAAGATCTTCTAAACTGT+AGG + chr1_1:39044254-39044273 None:intergenic 25.0%
! CATTTCTGATCATAATACTT+GGG - chr1_1:39044502-39044521 Msa0021710:CDS 25.0%
! TTAATGAATGAAGGAAACAT+TGG + chr1_1:39044559-39044578 None:intergenic 25.0%
! AACGTATCATTAATGAATGA+AGG + chr1_1:39044568-39044587 None:intergenic 25.0%
!!! ATGATACGTTTTGAAATTCT+AGG - chr1_1:39044578-39044597 Msa0021710:CDS 25.0%
!!! TTTTTTCTTGCAAACATTCA+AGG + chr1_1:39044739-39044758 None:intergenic 25.0%
! ACATAACATGTTAATTGCAA+TGG + chr1_1:39044812-39044831 None:intergenic 25.0%
! ATTGCAATTAACATGTTATG+TGG - chr1_1:39044811-39044830 Msa0021710:intron 25.0%
! GGAATATACAAATTCGATTT+AGG - chr1_1:39044832-39044851 Msa0021710:intron 25.0%
! ATATACAAATTCGATTTAGG+TGG - chr1_1:39044835-39044854 Msa0021710:intron 25.0%
! TTATATAATGCTATCAACCT+AGG + chr1_1:39045179-39045198 None:intergenic 25.0%
! CATTATATAAGCATGAATCT+TGG - chr1_1:39045189-39045208 Msa0021710:intron 25.0%
! TTGCCAGTTCAATATTTATT+AGG - chr1_1:39045221-39045240 Msa0021710:intron 25.0%
! TTGCCTAATAAATATTGAAC+TGG + chr1_1:39045227-39045246 None:intergenic 25.0%
! GCAGATAATTGAAAACTTAA+AGG + chr1_1:39045335-39045354 None:intergenic 25.0%
! TTCAACATTCTTATACTTTG+GGG + chr1_1:39045631-39045650 None:intergenic 25.0%
! CTTCAACATTCTTATACTTT+GGG + chr1_1:39045632-39045651 None:intergenic 25.0%
! TCTTCAACATTCTTATACTT+TGG + chr1_1:39045633-39045652 None:intergenic 25.0%
! AATCCAAAATTTGCAAAGAA+AGG - chr1_1:39045652-39045671 Msa0021710:intron 25.0%
! AACAATTGCTATGATGAATA+CGG + chr1_1:39045828-39045847 None:intergenic 25.0%
! AAAGTCATTTATTAACGGTA+AGG - chr1_1:39045900-39045919 Msa0021710:intron 25.0%
!!! ATGAACAATTGGTATTTTGA+TGG + chr1_1:39045927-39045946 None:intergenic 25.0%
! ATCAAAATACCAATTGTTCA+TGG - chr1_1:39045926-39045945 Msa0021710:intron 25.0%
! ATAATCATACCATGAACAAT+TGG + chr1_1:39045938-39045957 None:intergenic 25.0%
! TGTTGGAAAATACCAATATT+TGG - chr1_1:39046002-39046021 Msa0021710:CDS 25.0%
! GTTGGAAAATACCAATATTT+GGG - chr1_1:39046003-39046022 Msa0021710:CDS 25.0%
!! TTTTTCATACACAATAGCTA+GGG + chr1_1:39046084-39046103 None:intergenic 25.0%
! ATTGTGTATGAAAAAGAACT+CGG - chr1_1:39046089-39046108 Msa0021710:CDS 25.0%
! GAATATGCATTAATCTTTGT+CGG + chr1_1:39046150-39046169 None:intergenic 25.0%
!!! CATTTTGACATATGTTAACT+GGG - chr1_1:39046213-39046232 Msa0021710:five_prime_UTR 25.0%
!!! ATTTTGACATATGTTAACTG+GGG - chr1_1:39046214-39046233 Msa0021710:five_prime_UTR 25.0%
ATTGGAGAAATGAATATGTG+AGG + chr1_1:39039009-39039028 None:intergenic 30.0%
AAAGAGAGAAAGAAAGATGA+GGG + chr1_1:39039034-39039053 None:intergenic 30.0%
AAAAGAGAGAAAGAAAGATG+AGG + chr1_1:39039035-39039054 None:intergenic 30.0%
!!! GTTTTTCTTTGGAAGTGTTA+AGG + chr1_1:39039152-39039171 None:intergenic 30.0%
AATAAACGTAACAAGCTCTT+TGG - chr1_1:39039193-39039212 Msa0021710:three_prime_UTR 30.0%
!!! TGAATTTGTTGGTTTTTCAG+AGG - chr1_1:39039379-39039398 Msa0021710:three_prime_UTR 30.0%
!!! CGTAAGTACTGTTTTTTTTG+TGG - chr1_1:39039579-39039598 Msa0021710:CDS 30.0%
!!! AAGTACTGTTTTTTTTGTGG+TGG - chr1_1:39039582-39039601 Msa0021710:CDS 30.0%
ATGCATAATATATGCAAGGT+CGG + chr1_1:39039622-39039641 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG + chr1_1:39039626-39039645 None:intergenic 30.0%
AGTACTACTCAAATGGTAAA+TGG - chr1_1:39039678-39039697 Msa0021710:CDS 30.0%
! CAGAGACATTTTTGATATGT+GGG - chr1_1:39039704-39039723 Msa0021710:intron 30.0%
TATCGCTAGGACTATATATA+TGG - chr1_1:39039890-39039909 Msa0021710:intron 30.0%
! ATATTTATGGGCTTTTGTAC+AGG - chr1_1:39040123-39040142 Msa0021710:intron 30.0%
AACTGTACAAGAAAGGATAA+TGG - chr1_1:39040162-39040181 Msa0021710:intron 30.0%
!! GATAATGGACTCTAATGATT+TGG - chr1_1:39040177-39040196 Msa0021710:intron 30.0%
! GAAAATCGTGTATCTTTTTC+TGG - chr1_1:39040380-39040399 Msa0021710:intron 30.0%
ATGGCAAAGTGAAAAGAATA+TGG + chr1_1:39040445-39040464 None:intergenic 30.0%
!!! AAGCTTCTCTTTGTTTTTGT+AGG - chr1_1:39040556-39040575 Msa0021710:CDS 30.0%
TGGTTGTGAATAAAATAGAC+AGG - chr1_1:39040657-39040676 Msa0021710:intron 30.0%
TAGAATTGACGACAAAATCA+GGG + chr1_1:39040694-39040713 None:intergenic 30.0%
! TTTCAGGTAATATATGCAAG+TGG - chr1_1:39040954-39040973 Msa0021710:intron 30.0%
AACAACTACTAACAAGCATT+TGG + chr1_1:39041094-39041113 None:intergenic 30.0%
AAGTTAAGTAGAACTTAGAG+AGG + chr1_1:39041290-39041309 None:intergenic 30.0%
TGATCATGTCTATAAGGAAA+TGG + chr1_1:39041321-39041340 None:intergenic 30.0%
CATACACTCATTCATTAACT+AGG - chr1_1:39041504-39041523 Msa0021710:intron 30.0%
ATAAAGGACGTATAGCAATT+GGG - chr1_1:39041551-39041570 Msa0021710:intron 30.0%
! GTATTTTCCGTTTCAATCTT+CGG - chr1_1:39041790-39041809 Msa0021710:intron 30.0%
! TATTTTCCGTTTCAATCTTC+GGG - chr1_1:39041791-39041810 Msa0021710:intron 30.0%
TGGACAAATCATCATTTAAG+TGG + chr1_1:39041921-39041940 None:intergenic 30.0%
! ACTTAAATGATGATTTGTCC+AGG - chr1_1:39041920-39041939 Msa0021710:intron 30.0%
ATATCTACATGAATCTTCTG+AGG + chr1_1:39041952-39041971 None:intergenic 30.0%
CGTGTATGAAAAATTCTTTC+GGG - chr1_1:39041992-39042011 Msa0021710:intron 30.0%
TGATGTTCAGGTAAATATTG+AGG - chr1_1:39042067-39042086 Msa0021710:intron 30.0%
GATGTTCAGGTAAATATTGA+GGG - chr1_1:39042068-39042087 Msa0021710:intron 30.0%
! AGGTAAATATTGAGGGTTTT+AGG - chr1_1:39042075-39042094 Msa0021710:intron 30.0%
AGCCATTAAAATTCAGATTG+GGG - chr1_1:39042135-39042154 Msa0021710:intron 30.0%
TCGGATATCAACAAAGTAAA+AGG + chr1_1:39042324-39042343 None:intergenic 30.0%
! TGGACACAATAATTGCTATT+AGG - chr1_1:39042354-39042373 Msa0021710:intron 30.0%
ATGTTACCAGTAGGAATTTA+AGG - chr1_1:39042463-39042482 Msa0021710:intron 30.0%
TGTTACCAGTAGGAATTTAA+GGG - chr1_1:39042464-39042483 Msa0021710:intron 30.0%
!! ACCTTCTTGTTGATAACTTT+GGG + chr1_1:39042718-39042737 None:intergenic 30.0%
!! AACCTTCTTGTTGATAACTT+TGG + chr1_1:39042719-39042738 None:intergenic 30.0%
AGTTCTACAGGAAAATAACT+AGG + chr1_1:39042850-39042869 None:intergenic 30.0%
AATGTGCTAAATGTTAAGAG+AGG - chr1_1:39043160-39043179 Msa0021710:intron 30.0%
! CATGTTTTATGACTTGAACT+AGG - chr1_1:39043321-39043340 Msa0021710:intron 30.0%
!! GCTAAAGTTGTGTCATTTAA+AGG - chr1_1:39043409-39043428 Msa0021710:intron 30.0%
TTCATCCATGTTGTAATTTG+TGG - chr1_1:39043477-39043496 Msa0021710:intron 30.0%
! TCATCCATGTTGTAATTTGT+GGG - chr1_1:39043478-39043497 Msa0021710:intron 30.0%
CTATAAAGGTAAAACTTTGG+CGG + chr1_1:39043651-39043670 None:intergenic 30.0%
CTGCTATAAAGGTAAAACTT+TGG + chr1_1:39043654-39043673 None:intergenic 30.0%
! CCAAAAGTTTGAAATCAAAG+TGG + chr1_1:39043805-39043824 None:intergenic 30.0%
!! CCACTTTGATTTCAAACTTT+TGG - chr1_1:39043802-39043821 Msa0021710:intron 30.0%
AGTGTTAGAATTTGAGCTAA+GGG + chr1_1:39043870-39043889 None:intergenic 30.0%
! TTAAGAAAAAGTGTGGACTT+GGG + chr1_1:39043906-39043925 None:intergenic 30.0%
! ATTAAGAAAAAGTGTGGACT+TGG + chr1_1:39043907-39043926 None:intergenic 30.0%
TTCGATAGATTTGTATGTTG+TGG - chr1_1:39043976-39043995 Msa0021710:intron 30.0%
TGAATGCTATGTTAATCTGA+TGG + chr1_1:39044277-39044296 None:intergenic 30.0%
!!! TCATTGTTTTTTTGGCAGAT+CGG - chr1_1:39044308-39044327 Msa0021710:intron 30.0%
TTGGGATCTTATATTTGAGT+AGG + chr1_1:39044344-39044363 None:intergenic 30.0%
GCATTTCTGATCATAATACT+TGG - chr1_1:39044501-39044520 Msa0021710:CDS 30.0%
AACTGCAAGTATAAGTTACT+TGG - chr1_1:39045063-39045082 Msa0021710:CDS 30.0%
CCACAACATAATTATTGTTG+CGG - chr1_1:39045102-39045121 Msa0021710:intron 30.0%
TAACAAGTCATCATCTGAAA+AGG + chr1_1:39045151-39045170 None:intergenic 30.0%
TGTTTGTAGTTGTACTAGAT+AGG - chr1_1:39045275-39045294 Msa0021710:intron 30.0%
ACCAAAAACAAAACTGGAAA+TGG + chr1_1:39045301-39045320 None:intergenic 30.0%
AAAACTTAAAGGACCTATGT+GGG + chr1_1:39045324-39045343 None:intergenic 30.0%
! GCAGCATACACATTTTATTA+CGG + chr1_1:39045383-39045402 None:intergenic 30.0%
TCAACATTCTTATACTTTGG+GGG + chr1_1:39045630-39045649 None:intergenic 30.0%
! CTTCCTTTCTTTGCAAATTT+TGG + chr1_1:39045658-39045677 None:intergenic 30.0%
CAAAATTTGCAAAGAAAGGA+AGG - chr1_1:39045656-39045675 Msa0021710:intron 30.0%
CTGAAACTGCAGAATAATAT+AGG - chr1_1:39045789-39045808 Msa0021710:CDS 30.0%
ATAATATAGGAGTTGGCAAA+AGG - chr1_1:39045802-39045821 Msa0021710:CDS 30.0%
!!! GCAATTGTTCACATTGATTT+TGG - chr1_1:39045839-39045858 Msa0021710:intron 30.0%
!!! ATTGTTCACATTGATTTTGG+AGG - chr1_1:39045842-39045861 Msa0021710:intron 30.0%
GAAAATACCAATATTTGGGT+TGG - chr1_1:39046007-39046026 Msa0021710:CDS 30.0%
!! CTTTTTCATACACAATAGCT+AGG + chr1_1:39046085-39046104 None:intergenic 30.0%
CCAGTTAACATATGTCAAAA+TGG + chr1_1:39046215-39046234 None:intergenic 30.0%
!! CCATTTTGACATATGTTAAC+TGG - chr1_1:39046212-39046231 Msa0021710:five_prime_UTR 30.0%
TCATACATGAGTTAGTTATC+TGG + chr1_1:39046303-39046322 None:intergenic 30.0%
TACTCTACTTTGTGTTGTGT+GGG + chr1_1:39038908-39038927 None:intergenic 35.0%
ATACTCTACTTTGTGTTGTG+TGG + chr1_1:39038909-39038928 None:intergenic 35.0%
AAATACTAGTGGTACACGAA+TGG + chr1_1:39038937-39038956 None:intergenic 35.0%
GAAATGAATATGTGAGGCTA+TGG + chr1_1:39039003-39039022 None:intergenic 35.0%
GAAAGAAAGATGAGGGATAT+TGG + chr1_1:39039027-39039046 None:intergenic 35.0%
GTTAAGGGAAATGGAGAAAA+TGG - chr1_1:39039090-39039109 Msa0021710:three_prime_UTR 35.0%
! GGAGAAGAAGAGTTTTTCTT+TGG + chr1_1:39039163-39039182 None:intergenic 35.0%
!! GTTGGTTTGGAAGAAGATAA+GGG + chr1_1:39039223-39039242 None:intergenic 35.0%
!! AGTTGGTTTGGAAGAAGATA+AGG + chr1_1:39039224-39039243 None:intergenic 35.0%
ATTGTTGCTCATGTTGATCA+TGG - chr1_1:39039446-39039465 Msa0021710:three_prime_UTR 35.0%
TGCTATGCTCAAACAAACTA+AGG - chr1_1:39039487-39039506 Msa0021710:three_prime_UTR 35.0%
TGCATAATATATGCAAGGTC+GGG + chr1_1:39039621-39039640 None:intergenic 35.0%
! GCAGAGACATTTTTGATATG+TGG - chr1_1:39039703-39039722 Msa0021710:intron 35.0%
ACACTAAGTGCAGACAATTA+GGG + chr1_1:39039751-39039770 None:intergenic 35.0%
GAAACGCAAATCGTAAACAA+TGG + chr1_1:39040031-39040050 None:intergenic 35.0%
TTGTAGGTAGATTCTGTTGA+AGG - chr1_1:39040572-39040591 Msa0021710:CDS 35.0%
TGTAGGTAGATTCTGTTGAA+GGG - chr1_1:39040573-39040592 Msa0021710:CDS 35.0%
TTCAAGACAAATCTTGTCTG+TGG + chr1_1:39040605-39040624 None:intergenic 35.0%
GACAAGATTTGTCTTGAAGA+AGG - chr1_1:39040607-39040626 Msa0021710:CDS 35.0%
!! TTGAAGAAGGCTTTAGAGTT+TGG - chr1_1:39040620-39040639 Msa0021710:CDS 35.0%
GTAGAATTGACGACAAAATC+AGG + chr1_1:39040695-39040714 None:intergenic 35.0%
ACTAAATGCAACAGATGAAC+AGG - chr1_1:39040733-39040752 Msa0021710:intron 35.0%
!! GCGTGCTTTGAAAATTAAGT+TGG - chr1_1:39040793-39040812 Msa0021710:CDS 35.0%
AGATTTCAAATCTTGTTGGC+TGG - chr1_1:39040853-39040872 Msa0021710:CDS 35.0%
TTGATTCAAATAATGGCCCA+AGG + chr1_1:39041025-39041044 None:intergenic 35.0%
ATGTGCTCCTACTTATTTAC+TGG - chr1_1:39041185-39041204 Msa0021710:intron 35.0%
TCCTACTTATTTACTGGCAA+GGG - chr1_1:39041191-39041210 Msa0021710:intron 35.0%
! TTTACCAGTTGATTCAGTTG+AGG - chr1_1:39041246-39041265 Msa0021710:intron 35.0%
! TTACCAGTTGATTCAGTTGA+GGG - chr1_1:39041247-39041266 Msa0021710:intron 35.0%
CATAAAGGACGTATAGCAAT+TGG - chr1_1:39041550-39041569 Msa0021710:intron 35.0%
!!! GAAGCTGGAGTTTTAGAAAA+AGG - chr1_1:39041580-39041599 Msa0021710:intron 35.0%
!!! TGGAGTTTTAGAAAAAGGCA+TGG - chr1_1:39041585-39041604 Msa0021710:intron 35.0%
TGAATTCCTACTTCGCTAAT+TGG - chr1_1:39041667-39041686 Msa0021710:CDS 35.0%
TGGACCATGTGATGAATATT+TGG - chr1_1:39041687-39041706 Msa0021710:CDS 35.0%
GGACCATGTGATGAATATTT+GGG - chr1_1:39041688-39041707 Msa0021710:CDS 35.0%
ATGCCCAAATATTCATCACA+TGG + chr1_1:39041694-39041713 None:intergenic 35.0%
! ATTTTCCGTTTCAATCTTCG+GGG - chr1_1:39041792-39041811 Msa0021710:intron 35.0%
! ATATCCTCTATTTCTTGCAG+TGG + chr1_1:39041881-39041900 None:intergenic 35.0%
ATGTGGAATTTCTGATGTTC+AGG - chr1_1:39042055-39042074 Msa0021710:intron 35.0%
! CTCCCCAATCTGAATTTTAA+TGG + chr1_1:39042140-39042159 None:intergenic 35.0%
ACAATTGCGGATAAATTGAC+TGG - chr1_1:39042160-39042179 Msa0021710:intron 35.0%
! GAGAAAGACATTTTCACTGT+TGG + chr1_1:39042217-39042236 None:intergenic 35.0%
AACAAAAGGCGATGTGTTTA+TGG + chr1_1:39042239-39042258 None:intergenic 35.0%
! ATAAACACATCGCCTTTTGT+TGG - chr1_1:39042238-39042257 Msa0021710:intron 35.0%
GCTATTAGGTTAAGCTTTCT+TGG - chr1_1:39042368-39042387 Msa0021710:intron 35.0%
TCCACTGACAATGAATGTAT+CGG + chr1_1:39042550-39042569 None:intergenic 35.0%
AAGGATACGAATTCATGGTT+GGG - chr1_1:39042689-39042708 Msa0021710:CDS 35.0%
!! TTCTTGTTGATAACTTTGGG+AGG + chr1_1:39042715-39042734 None:intergenic 35.0%
TCCCAAAGTTATCAACAAGA+AGG - chr1_1:39042714-39042733 Msa0021710:CDS 35.0%
! GAACTAACATGCTTAGCTTT+AGG - chr1_1:39042865-39042884 Msa0021710:intron 35.0%
AGCAGCTAATCATGTCAATT+AGG + chr1_1:39042902-39042921 None:intergenic 35.0%
GGAAAGTGATTATTGAGTGT+TGG + chr1_1:39043073-39043092 None:intergenic 35.0%
CCTTAAGACATTGGGTATAT+GGG + chr1_1:39043189-39043208 None:intergenic 35.0%
ACCTTAAGACATTGGGTATA+TGG + chr1_1:39043190-39043209 None:intergenic 35.0%
! TACCCAATGTCTTAAGGTTT+TGG - chr1_1:39043192-39043211 Msa0021710:CDS 35.0%
! ACCCAATGTCTTAAGGTTTT+GGG - chr1_1:39043193-39043212 Msa0021710:CDS 35.0%
ACCCAAAACCTTAAGACATT+GGG + chr1_1:39043197-39043216 None:intergenic 35.0%
!!! CATTAGCTCGTTGTTTCTTT+TGG - chr1_1:39043253-39043272 Msa0021710:CDS 35.0%
ACATGGATGAAATGTGTGAA+GGG + chr1_1:39043468-39043487 None:intergenic 35.0%
AACATGGATGAAATGTGTGA+AGG + chr1_1:39043469-39043488 None:intergenic 35.0%
TCAATGCTATGCTGCTATAA+AGG + chr1_1:39043665-39043684 None:intergenic 35.0%
GAGTGTTAGAATTTGAGCTA+AGG + chr1_1:39043871-39043890 None:intergenic 35.0%
ATGACACACAGACATAAGTA+CGG + chr1_1:39044100-39044119 None:intergenic 35.0%
TGTCTGTGTGTCATAACAAT+AGG - chr1_1:39044106-39044125 Msa0021710:intron 35.0%
AACACTATCTTCGATTCCTA+TGG - chr1_1:39044426-39044445 Msa0021710:intron 35.0%
ACACTATCTTCGATTCCTAT+GGG - chr1_1:39044427-39044446 Msa0021710:intron 35.0%
! TTCTAGGTTGCTTTCGAAAA+TGG - chr1_1:39044594-39044613 Msa0021710:CDS 35.0%
CCGCAACAATAATTATGTTG+TGG + chr1_1:39045105-39045124 None:intergenic 35.0%
!! GATGACTTGTTATGAATCCT+AGG - chr1_1:39045159-39045178 Msa0021710:intron 35.0%
ACTACAAACACACAGCTTAA+AGG + chr1_1:39045265-39045284 None:intergenic 35.0%
!!! GCCATTTCCAGTTTTGTTTT+TGG - chr1_1:39045297-39045316 Msa0021710:intron 35.0%
!!! TTTTGTTTTTGGTCCCACAT+AGG - chr1_1:39045308-39045327 Msa0021710:intron 35.0%
GAAAACTTAAAGGACCTATG+TGG + chr1_1:39045325-39045344 None:intergenic 35.0%
! AAATGTGTATGCTGCTTCTA+TGG - chr1_1:39045388-39045407 Msa0021710:intron 35.0%
! AATGTGTATGCTGCTTCTAT+GGG - chr1_1:39045389-39045408 Msa0021710:intron 35.0%
! GAGTGAACGTAAAGTTTTCA+GGG + chr1_1:39045469-39045488 None:intergenic 35.0%
! TGAGTGAACGTAAAGTTTTC+AGG + chr1_1:39045470-39045489 None:intergenic 35.0%
AGTGATTCTTGATACACCAT+TGG - chr1_1:39045546-39045565 Msa0021710:intron 35.0%
TACACCATTGGATTACAGTT+TGG - chr1_1:39045558-39045577 Msa0021710:intron 35.0%
TCATCCAAACTGTAATCCAA+TGG + chr1_1:39045565-39045584 None:intergenic 35.0%
CAACATTCTTATACTTTGGG+GGG + chr1_1:39045629-39045648 None:intergenic 35.0%
CTGCAGAATAATATAGGAGT+TGG - chr1_1:39045795-39045814 Msa0021710:CDS 35.0%
TGTATGAAAAAGAACTCGGA+TGG - chr1_1:39046093-39046112 Msa0021710:CDS 35.0%
GTATGAAAAAGAACTCGGAT+GGG - chr1_1:39046094-39046113 Msa0021710:CDS 35.0%
TGTATGAACCAAACAATCCA+AGG - chr1_1:39046316-39046335 Msa0021710:five_prime_UTR 35.0%
AGAGTGAGTGAGTGAGTTAA+GGG - chr1_1:39039075-39039094 Msa0021710:three_prime_UTR 40.0%
AGTGAGTGAGTTAAGGGAAA+TGG - chr1_1:39039081-39039100 Msa0021710:three_prime_UTR 40.0%
! AGCAATTCGAAGAGTTGGTT+TGG + chr1_1:39039236-39039255 None:intergenic 40.0%
CTTGAAGCAATTCGAAGAGT+TGG + chr1_1:39039241-39039260 None:intergenic 40.0%
CAACTCTTCGAATTGCTTCA+AGG - chr1_1:39039239-39039258 Msa0021710:three_prime_UTR 40.0%
GCATAATATATGCAAGGTCG+GGG + chr1_1:39039620-39039639 None:intergenic 40.0%
GGACGTAAGTACTACTCAAA+TGG - chr1_1:39039671-39039690 Msa0021710:CDS 40.0%
! CATTTTTGATATGTGGGTCG+CGG - chr1_1:39039710-39039729 Msa0021710:intron 40.0%
! ATTTTTGATATGTGGGTCGC+GGG - chr1_1:39039711-39039730 Msa0021710:intron 40.0%
TGCAGACAATTAGGGAATCA+CGG + chr1_1:39039743-39039762 None:intergenic 40.0%
CACACTAAGTGCAGACAATT+AGG + chr1_1:39039752-39039771 None:intergenic 40.0%
ATTTGGCACAAACGTGTGTT+AGG - chr1_1:39039824-39039843 Msa0021710:intron 40.0%
TTAGGCCAAACTGTTGTTGT+GGG - chr1_1:39039842-39039861 Msa0021710:intron 40.0%
TAGCTACTCTATAGTCTCAG+AGG - chr1_1:39039963-39039982 Msa0021710:intron 40.0%
TACTCTATAGTCTCAGAGGT+AGG - chr1_1:39039967-39039986 Msa0021710:intron 40.0%
ATCCTTTCGTTTACGCAGTT+TGG + chr1_1:39040002-39040021 None:intergenic 40.0%
! AATGATTTGGAGCGTGAAAG+AGG - chr1_1:39040190-39040209 Msa0021710:intron 40.0%
AGTAGAGCGCATCTTGAATA+TGG - chr1_1:39040306-39040325 Msa0021710:intron 40.0%
GAATATGGCAAAGTGCATGA+GGG + chr1_1:39040430-39040449 None:intergenic 40.0%
AGAATATGGCAAAGTGCATG+AGG + chr1_1:39040431-39040450 None:intergenic 40.0%
ACAAATCTTGTCTGTGGCAT+TGG + chr1_1:39040599-39040618 None:intergenic 40.0%
GTTGGAACTTGCAAGTTTGT+CGG - chr1_1:39040811-39040830 Msa0021710:CDS 40.0%
! CTTTTTGCAGTGTGACTTTC+AGG - chr1_1:39040938-39040957 Msa0021710:intron 40.0%
AGTGGTATAAAAGGGAAAGC+AGG - chr1_1:39040972-39040991 Msa0021710:intron 40.0%
GTGGTATAAAAGGGAAAGCA+GGG - chr1_1:39040973-39040992 Msa0021710:intron 40.0%
TCAATCATGAGATGTATCCC+TGG - chr1_1:39041041-39041060 Msa0021710:intron 40.0%
GAGCCATCTTTATCAATACG+CGG + chr1_1:39041068-39041087 None:intergenic 40.0%
CTCCTACTTATTTACTGGCA+AGG - chr1_1:39041190-39041209 Msa0021710:intron 40.0%
TCCCTTGCCAGTAAATAAGT+AGG + chr1_1:39041195-39041214 None:intergenic 40.0%
ATTCCCTCAACTGAATCAAC+TGG + chr1_1:39041253-39041272 None:intergenic 40.0%
! AGAAAAAGGCATGGAAGTCA+AGG - chr1_1:39041594-39041613 Msa0021710:intron 40.0%
ATCTGAGAATAGTGAGCTAG+TGG + chr1_1:39041767-39041786 None:intergenic 40.0%
! CAGTGGACTTTGAACCAAAA+TGG + chr1_1:39041864-39041883 None:intergenic 40.0%
AAGTCCACTGCAAGAAATAG+AGG - chr1_1:39041874-39041893 Msa0021710:intron 40.0%
!! AATCTTCTGAGGTACAAACC+TGG + chr1_1:39041941-39041960 None:intergenic 40.0%
TGCGGATAAATTGACTGGAA+AGG - chr1_1:39042165-39042184 Msa0021710:intron 40.0%
!! TGTTGGTTCTTCCACTTTGA+TGG + chr1_1:39042200-39042219 None:intergenic 40.0%
TACTGGTAACATACTTTCCC+TGG + chr1_1:39042455-39042474 None:intergenic 40.0%
! AGGGAAAGTATGTTACCAGT+AGG - chr1_1:39042454-39042473 Msa0021710:intron 40.0%
ATATTGCAATCTTCAGGCGA+AGG - chr1_1:39042665-39042684 Msa0021710:CDS 40.0%
TATTGCAATCTTCAGGCGAA+GGG - chr1_1:39042666-39042685 Msa0021710:CDS 40.0%
AAGGGAAGGATACGAATTCA+TGG - chr1_1:39042684-39042703 Msa0021710:CDS 40.0%
GAAGGATACGAATTCATGGT+TGG - chr1_1:39042688-39042707 Msa0021710:CDS 40.0%
!! GAAGGTTGATGACAAAGTGT+TGG - chr1_1:39042732-39042751 Msa0021710:CDS 40.0%
TCAGCATCTGTCAAATGACT+GGG + chr1_1:39042825-39042844 None:intergenic 40.0%
TTCAGCATCTGTCAAATGAC+TGG + chr1_1:39042826-39042845 None:intergenic 40.0%
!! GCTAAGCATGTTAGTTCTAC+AGG + chr1_1:39042862-39042881 None:intergenic 40.0%
TTACCGTGTCTGTTACATGA+AGG - chr1_1:39042929-39042948 Msa0021710:intron 40.0%
TGACCTTCATGTAACAGACA+CGG + chr1_1:39042935-39042954 None:intergenic 40.0%
TCTGTTACATGAAGGTCAGT+TGG - chr1_1:39042937-39042956 Msa0021710:intron 40.0%
AGCACATTCATACTCGATGT+GGG + chr1_1:39043148-39043167 None:intergenic 40.0%
TAGCACATTCATACTCGATG+TGG + chr1_1:39043149-39043168 None:intergenic 40.0%
CCCATATACCCAATGTCTTA+AGG - chr1_1:39043186-39043205 Msa0021710:CDS 40.0%
CACCCAAAACCTTAAGACAT+TGG + chr1_1:39043198-39043217 None:intergenic 40.0%
!!! CAATGTCTTAAGGTTTTGGG+TGG - chr1_1:39043196-39043215 Msa0021710:CDS 40.0%
! AGATGTGGGTTCTAATCTCT+TGG - chr1_1:39043219-39043238 Msa0021710:CDS 40.0%
! TTCTAATCTCTTGGTGGTTC+TGG - chr1_1:39043228-39043247 Msa0021710:CDS 40.0%
CCATCCCACAAATTACAACA+TGG + chr1_1:39043485-39043504 None:intergenic 40.0%
! CCATGTTGTAATTTGTGGGA+TGG - chr1_1:39043482-39043501 Msa0021710:intron 40.0%
GGATCTGTTGTTGAACTTCT+TGG - chr1_1:39043544-39043563 Msa0021710:intron 40.0%
ATCGGATCGACATGAGAATT+GGG + chr1_1:39044063-39044082 None:intergenic 40.0%
ACGGGCAATGAAAATGACAT+CGG + chr1_1:39044081-39044100 None:intergenic 40.0%
TGACACACAGACATAAGTAC+GGG + chr1_1:39044099-39044118 None:intergenic 40.0%
!!! TTGTTTTTTTGGCAGATCGG+AGG - chr1_1:39044311-39044330 Msa0021710:intron 40.0%
!!! TGTTTTTTTGGCAGATCGGA+GGG - chr1_1:39044312-39044331 Msa0021710:intron 40.0%
AAATATAAGATCCCAACCCG+TGG - chr1_1:39044348-39044367 Msa0021710:intron 40.0%
!!! CAATTTTAACTGCTTCCCGA+GGG - chr1_1:39044391-39044410 Msa0021710:intron 40.0%
AGGAATCGAAGATAGTGTTG+AGG + chr1_1:39044425-39044444 None:intergenic 40.0%
!! AAGCGTTGGATATCAAAGCA+AGG + chr1_1:39044529-39044548 None:intergenic 40.0%
ACATTGGCAAACATAAGCGT+TGG + chr1_1:39044543-39044562 None:intergenic 40.0%
AACGAACATACGTTCCAACA+AGG - chr1_1:39044764-39044783 Msa0021710:intron 40.0%
CATGTTAATTGCAATGGAGC+TGG + chr1_1:39044806-39044825 None:intergenic 40.0%
CAAACACACAGCTTAAAGGA+CGG + chr1_1:39045261-39045280 None:intergenic 40.0%
TGTGGGACCAAAAACAAAAC+TGG + chr1_1:39045307-39045326 None:intergenic 40.0%
! ATGTGTATGCTGCTTCTATG+GGG - chr1_1:39045390-39045409 Msa0021710:intron 40.0%
GTATCAAGAATCACTGCACA+AGG + chr1_1:39045541-39045560 None:intergenic 40.0%
CCTCTACTAGTTCATCTTCT+TGG + chr1_1:39045603-39045622 None:intergenic 40.0%
CCAAGAAGATGAACTAGTAG+AGG - chr1_1:39045600-39045619 Msa0021710:intron 40.0%
ATCCATACGCCATAAGCAAA+TGG - chr1_1:39046045-39046064 Msa0021710:CDS 40.0%
CATACACAATAGCTAGGGAT+GGG + chr1_1:39046079-39046098 None:intergenic 40.0%
TCATACACAATAGCTAGGGA+TGG + chr1_1:39046080-39046099 None:intergenic 40.0%
ATCTTTGTCGGAGAACTTGT+TGG + chr1_1:39046138-39046157 None:intergenic 40.0%
GCACTAGAATGTTTGCTCTT+GGG - chr1_1:39046258-39046277 Msa0021710:five_prime_UTR 40.0%
! ATCTGGTATGTTGCTTGAGA+AGG + chr1_1:39046286-39046305 None:intergenic 40.0%
GAGAGTGAGTGAGTGAGTTA+AGG - chr1_1:39039074-39039093 Msa0021710:three_prime_UTR 45.0%
GTCACAGAAGAGCCTAAAAC+TGG - chr1_1:39039295-39039314 Msa0021710:three_prime_UTR 45.0%
!!! TGTTTTTTTTGTGGTGGCCG+AGG - chr1_1:39039588-39039607 Msa0021710:CDS 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG + chr1_1:39039648-39039667 None:intergenic 45.0%
GCAGACAATTAGGGAATCAC+GGG + chr1_1:39039742-39039761 None:intergenic 45.0%
TTGTGCCAAATGCAAGGACA+GGG + chr1_1:39039815-39039834 None:intergenic 45.0%
TTTGTGCCAAATGCAAGGAC+AGG + chr1_1:39039816-39039835 None:intergenic 45.0%
ACACGTTTGTGCCAAATGCA+AGG + chr1_1:39039821-39039840 None:intergenic 45.0%
GTTAGGCCAAACTGTTGTTG+TGG - chr1_1:39039841-39039860 Msa0021710:intron 45.0%
TAGGCCAAACTGTTGTTGTG+GGG - chr1_1:39039843-39039862 Msa0021710:intron 45.0%
! ACTCCAGGTCACTCTGATTT+TGG - chr1_1:39040277-39040296 Msa0021710:intron 45.0%
! CTCCAGGTCACTCTGATTTT+GGG - chr1_1:39040278-39040297 Msa0021710:intron 45.0%
! TCCAGGTCACTCTGATTTTG+GGG - chr1_1:39040279-39040298 Msa0021710:intron 45.0%
CGCATCTTGAATATGGTCGA+AGG - chr1_1:39040313-39040332 Msa0021710:intron 45.0%
GGTCGAAGGAATTCTTCTAG+TGG - chr1_1:39040327-39040346 Msa0021710:intron 45.0%
CTTTATCAATACGCGGTCCA+GGG + chr1_1:39041061-39041080 None:intergenic 45.0%
TCTTTATCAATACGCGGTCC+AGG + chr1_1:39041062-39041081 None:intergenic 45.0%
! GGACCGCGTATTGATAAAGA+TGG - chr1_1:39041062-39041081 Msa0021710:intron 45.0%
!! GTTACAAGTACCGAGTACGA+GGG - chr1_1:39041526-39041545 Msa0021710:intron 45.0%
TCCTTTATGTCCCTCGTACT+CGG + chr1_1:39041539-39041558 None:intergenic 45.0%
CATGGTCCAATTAGCGAAGT+AGG + chr1_1:39041676-39041695 None:intergenic 45.0%
AGCTTCCCCGAAGATTGAAA+CGG + chr1_1:39041800-39041819 None:intergenic 45.0%
AGCTGGAGCAGAGATTATTG+AGG - chr1_1:39041816-39041835 Msa0021710:intron 45.0%
GGGGATATATGTGCAGTATG+TGG - chr1_1:39042038-39042057 Msa0021710:intron 45.0%
TCAGATTGGGGAGACAATTG+CGG - chr1_1:39042147-39042166 Msa0021710:intron 45.0%
GGTTCTTCCACTTTGATGGA+AGG + chr1_1:39042196-39042215 None:intergenic 45.0%
CATACCTCACGACCAACAAA+AGG + chr1_1:39042253-39042272 None:intergenic 45.0%
TGATATCCGATGCTGTCTGT+TGG - chr1_1:39042334-39042353 Msa0021710:intron 45.0%
TTGTGTCCAACAGACAGCAT+CGG + chr1_1:39042343-39042362 None:intergenic 45.0%
CCTGTCCCTTAAATTCCTAC+TGG + chr1_1:39042472-39042491 None:intergenic 45.0%
CCAGTAGGAATTTAAGGGAC+AGG - chr1_1:39042469-39042488 Msa0021710:intron 45.0%
TCGTGAACTTGAGCGAAATC+TGG - chr1_1:39042497-39042516 Msa0021710:CDS 45.0%
TGAGCGAAATCTGGCTATGA+AGG - chr1_1:39042506-39042525 Msa0021710:CDS 45.0%
CTGGCTATGAAGGTTGAAGA+TGG - chr1_1:39042516-39042535 Msa0021710:CDS 45.0%
GCCGATACATTCATTGTCAG+TGG - chr1_1:39042546-39042565 Msa0021710:CDS 45.0%
ACATTCATTGTCAGTGGACG+TGG - chr1_1:39042552-39042571 Msa0021710:CDS 45.0%
!!! TAAGGTTTTGGGTGGAGATG+TGG - chr1_1:39043204-39043223 Msa0021710:CDS 45.0%
!!! AAGGTTTTGGGTGGAGATGT+GGG - chr1_1:39043205-39043224 Msa0021710:CDS 45.0%
! TGTGGGTTCTAATCTCTTGG+TGG - chr1_1:39043222-39043241 Msa0021710:CDS 45.0%
! TGTTTCTTTTGGATCCCACC+TGG - chr1_1:39043264-39043283 Msa0021710:CDS 45.0%
AAAAAGAGCAACCTCCAGGT+GGG + chr1_1:39043281-39043300 None:intergenic 45.0%
GTAGAAAAAGAGCAACCTCC+AGG + chr1_1:39043285-39043304 None:intergenic 45.0%
ATGGTTGCAGATTGCAACTG+TGG - chr1_1:39043501-39043520 Msa0021710:intron 45.0%
ACAGATCCCATATGCTCTTC+CGG + chr1_1:39043532-39043551 None:intergenic 45.0%
ATGTTCGACATGCAAGGAGT+TGG - chr1_1:39043583-39043602 Msa0021710:intron 45.0%
TGTTCGACATGCAAGGAGTT+GGG - chr1_1:39043584-39043603 Msa0021710:intron 45.0%
CATCGGATCGACATGAGAAT+TGG + chr1_1:39044064-39044083 None:intergenic 45.0%
TTGCATTCCGCAATCCAAGT+AGG + chr1_1:39044374-39044393 None:intergenic 45.0%
!!! GCAATTTTAACTGCTTCCCG+AGG - chr1_1:39044390-39044409 Msa0021710:intron 45.0%
GACATGAGTACTCGGGATTT+AGG - chr1_1:39044462-39044481 Msa0021710:intron 45.0%
TTATGCAATCGCGAGTTCAC+AGG - chr1_1:39044629-39044648 Msa0021710:CDS 45.0%
CCTTTATAAACTTCCGCTCC+TGG + chr1_1:39044678-39044697 None:intergenic 45.0%
CCAGGAGCGGAAGTTTATAA+AGG - chr1_1:39044675-39044694 Msa0021710:intron 45.0%
CGTTCCAACAAGGAACAATC+AGG - chr1_1:39044774-39044793 Msa0021710:intron 45.0%
CTCACCTGATTGTTCCTTGT+TGG + chr1_1:39044781-39044800 None:intergenic 45.0%
AGGTGGTTTGATGCAATCTC+TGG - chr1_1:39044852-39044871 Msa0021710:intron 45.0%
! TGTGTATGCTGCTTCTATGG+GGG - chr1_1:39045391-39045410 Msa0021710:intron 45.0%
AATCACTGCACAAGGAAGCA+AGG + chr1_1:39045533-39045552 None:intergenic 45.0%
TCTGCTTCACAGAATCACAG+TGG + chr1_1:39045689-39045708 None:intergenic 45.0%
ACTCGGACCAACCCAAATAT+TGG + chr1_1:39046017-39046036 None:intergenic 45.0%
!! AATATTTGGGTTGGTCCGAG+TGG - chr1_1:39046016-39046035 Msa0021710:CDS 45.0%
GACCATTTGCTTATGGCGTA+TGG + chr1_1:39046050-39046069 None:intergenic 45.0%
GCCATAAGCAAATGGTCAGA+TGG - chr1_1:39046053-39046072 Msa0021710:CDS 45.0%
GCCATCTGACCATTTGCTTA+TGG + chr1_1:39046057-39046076 None:intergenic 45.0%
TGAAAAAGAACTCGGATGGG+AGG - chr1_1:39046097-39046116 Msa0021710:CDS 45.0%
!! GAGAACTTGTTGGACACACA+AGG + chr1_1:39046128-39046147 None:intergenic 45.0%
! GGCTGTAGTTCTGTGAATGA+GGG - chr1_1:39046235-39046254 Msa0021710:five_prime_UTR 45.0%
! GCTGTAGTTCTGTGAATGAG+GGG - chr1_1:39046236-39046255 Msa0021710:five_prime_UTR 45.0%
GGCACTAGAATGTTTGCTCT+TGG - chr1_1:39046257-39046276 Msa0021710:five_prime_UTR 45.0%
ACCAAACAATCCAAGGCTGT+TGG - chr1_1:39046323-39046342 Msa0021710:five_prime_UTR 45.0%
TCCAACAGCCTTGGATTGTT+TGG + chr1_1:39046327-39046346 None:intergenic 45.0%
!! AATAATGATATATAAAATAA+AGG + chr1_1:39044193-39044212 None:intergenic 5.0%
CCTAGTGAGCTTAGCTCAGT+TGG + chr1_1:39039653-39039672 None:intergenic 50.0%
CCAACTGAGCTAAGCTCACT+AGG - chr1_1:39039650-39039669 Msa0021710:CDS 50.0%
TGTGCCAAATGCAAGGACAG+GGG + chr1_1:39039814-39039833 None:intergenic 50.0%
AGGCCAAACTGTTGTTGTGG+GGG - chr1_1:39039844-39039863 Msa0021710:intron 50.0%
GAACCCCCACAACAACAGTT+TGG + chr1_1:39039850-39039869 None:intergenic 50.0%
AACTGTTGTTGTGGGGGTTC+AGG - chr1_1:39039850-39039869 Msa0021710:intron 50.0%
ACTGTTGTTGTGGGGGTTCA+GGG - chr1_1:39039851-39039870 Msa0021710:intron 50.0%
GTCTCAGAGGTAGGCACAAT+TGG - chr1_1:39039976-39039995 Msa0021710:intron 50.0%
GGCCAAACTGCGTAAACGAA+AGG - chr1_1:39039997-39040016 Msa0021710:intron 50.0%
! CCAGGTCACTCTGATTTTGG+GGG - chr1_1:39040280-39040299 Msa0021710:intron 50.0%
!! GGCTTTAGAGTTTGGCCATG+CGG - chr1_1:39040628-39040647 Msa0021710:CDS 50.0%
TCACAACCACAACAACCGCA+TGG + chr1_1:39040646-39040665 None:intergenic 50.0%
AGGGTTGTCTCCTGAAGATC+TGG - chr1_1:39040992-39041011 Msa0021710:intron 50.0%
AAGATCTGGCAGACGACCTT+GGG - chr1_1:39041006-39041025 Msa0021710:intron 50.0%
!! GGTTACAAGTACCGAGTACG+AGG - chr1_1:39041525-39041544 Msa0021710:intron 50.0%
ACCGAGTACGAGGGACATAA+AGG - chr1_1:39041535-39041554 Msa0021710:intron 50.0%
ACGTATAGCAATTGGGCGCT+TGG - chr1_1:39041558-39041577 Msa0021710:intron 50.0%
GTTTCAATCTTCGGGGAAGC+TGG - chr1_1:39041799-39041818 Msa0021710:intron 50.0%
!! TCTTTCGGGTTCCTGCTCAA+AGG - chr1_1:39042006-39042025 Msa0021710:intron 50.0%
!! CTTTCGGGTTCCTGCTCAAA+GGG - chr1_1:39042007-39042026 Msa0021710:intron 50.0%
GGCACTACCTTCCATCAAAG+TGG - chr1_1:39042186-39042205 Msa0021710:intron 50.0%
! ATCGCCTTTTGTTGGTCGTG+AGG - chr1_1:39042246-39042265 Msa0021710:intron 50.0%
!! CAAAGTGTTGGAGCCGTATG+AGG - chr1_1:39042744-39042763 Msa0021710:CDS 50.0%
! TTCTTTTGGATCCCACCTGG+AGG - chr1_1:39043267-39043286 Msa0021710:CDS 50.0%
GAAAAAGAGCAACCTCCAGG+TGG + chr1_1:39043282-39043301 None:intergenic 50.0%
GTTGCAGATTGCAACTGTGG+AGG - chr1_1:39043504-39043523 Msa0021710:intron 50.0%
! GATTGCAACTGTGGAGGTAC+CGG - chr1_1:39043510-39043529 Msa0021710:intron 50.0%
!! GAGGTACCGGAAGAGCATAT+GGG - chr1_1:39043523-39043542 Msa0021710:intron 50.0%
AACTTCTTGGCCAGAGACGA+GGG - chr1_1:39043557-39043576 Msa0021710:intron 50.0%
GGGCAAATGTTCGACATGCA+AGG - chr1_1:39043577-39043596 Msa0021710:intron 50.0%
AGATATCTCGCCACACAAGC+TGG - chr1_1:39043825-39043844 Msa0021710:intron 50.0%
CTCCACATAACCAGCTTGTG+TGG + chr1_1:39043838-39043857 None:intergenic 50.0%
TGTTGAGGATAGCTGTCCCT+CGG + chr1_1:39044410-39044429 None:intergenic 50.0%
TCTTCGATTCCTATGGGCCT+TGG - chr1_1:39044433-39044452 Msa0021710:intron 50.0%
CTTCGATTCCTATGGGCCTT+GGG - chr1_1:39044434-39044453 Msa0021710:intron 50.0%
AATCGCGAGTTCACAGGAGA+GGG - chr1_1:39044635-39044654 Msa0021710:CDS 50.0%
! GATGTTTGTTGGTCCAGGAG+CGG - chr1_1:39044662-39044681 Msa0021710:intron 50.0%
CATTCAAGGACAAGTCCCCA+GGG + chr1_1:39044725-39044744 None:intergenic 50.0%
ACATTCAAGGACAAGTCCCC+AGG + chr1_1:39044726-39044745 None:intergenic 50.0%
CGTATGGATCCCTTACCACT+CGG + chr1_1:39046034-39046053 None:intergenic 50.0%
! GGGCTGTAGTTCTGTGAATG+AGG - chr1_1:39046234-39046253 Msa0021710:five_prime_UTR 50.0%
CAAGGTCGGGGTTCAAACCT+CGG + chr1_1:39039608-39039627 None:intergenic 55.0%
GTGCCAAATGCAAGGACAGG+GGG + chr1_1:39039813-39039832 None:intergenic 55.0%
CTGTTGTTGTGGGGGTTCAG+GGG - chr1_1:39039852-39039871 Msa0021710:intron 55.0%
CCCCCAAAATCAGAGTGACC+TGG + chr1_1:39040283-39040302 None:intergenic 55.0%
GTTTGGCCATGCGGTTGTTG+TGG - chr1_1:39040637-39040656 Msa0021710:intron 55.0%
AGGTCGTCTGCCAGATCTTC+AGG + chr1_1:39041005-39041024 None:intergenic 55.0%
GAAGATCTGGCAGACGACCT+TGG - chr1_1:39041005-39041024 Msa0021710:intron 55.0%
GCAATCTTCAGGCGAAGGGA+AGG - chr1_1:39042670-39042689 Msa0021710:CDS 55.0%
!! GGAGGTACCGGAAGAGCATA+TGG - chr1_1:39043522-39043541 Msa0021710:intron 55.0%
GAACTTCTTGGCCAGAGACG+AGG - chr1_1:39043556-39043575 Msa0021710:intron 55.0%
CGAACATTTGCCCTCGTCTC+TGG + chr1_1:39043570-39043589 None:intergenic 55.0%
CGCCACACAAGCTGGTTATG+TGG - chr1_1:39043833-39043852 Msa0021710:intron 55.0%
ATCCAAGTAGGCCACGGGTT+GGG + chr1_1:39044362-39044381 None:intergenic 55.0%
AATCCAAGTAGGCCACGGGT+TGG + chr1_1:39044363-39044382 None:intergenic 55.0%
TCCGCAATCCAAGTAGGCCA+CGG + chr1_1:39044368-39044387 None:intergenic 55.0%
GTTGAGGATAGCTGTCCCTC+GGG + chr1_1:39044409-39044428 None:intergenic 55.0%
GTACTCATGTCACCAGCCCA+AGG + chr1_1:39044453-39044472 None:intergenic 55.0%
! GGGCTGGTGACATGAGTACT+CGG - chr1_1:39044454-39044473 Msa0021710:intron 55.0%
GGCTGGTGACATGAGTACTC+GGG - chr1_1:39044455-39044474 Msa0021710:intron 55.0%
TACTCGGGATTTAGGCTCGC+TGG - chr1_1:39044470-39044489 Msa0021710:intron 55.0%
CAATCGCGAGTTCACAGGAG+AGG - chr1_1:39044634-39044653 Msa0021710:CDS 55.0%
ATCGCGAGTTCACAGGAGAG+GGG - chr1_1:39044636-39044655 Msa0021710:CDS 55.0%
GAGAGGGGGCAGATGTTTGT+TGG - chr1_1:39044651-39044670 Msa0021710:CDS 55.0%
! GGGCAGATGTTTGTTGGTCC+AGG - chr1_1:39044657-39044676 Msa0021710:intron 55.0%
ATTGGCATCCATCAACGCCC+TGG - chr1_1:39044705-39044724 Msa0021710:intron 55.0%
TTGGCATCCATCAACGCCCT+GGG - chr1_1:39044706-39044725 Msa0021710:intron 55.0%
!! TTGGGTTGGTCCGAGTGGTA+AGG - chr1_1:39046021-39046040 Msa0021710:CDS 55.0%
!! TGGGTTGGTCCGAGTGGTAA+GGG - chr1_1:39046022-39046041 Msa0021710:CDS 55.0%
ATGCAAGGACAGGGGGTGGA+GGG + chr1_1:39039806-39039825 None:intergenic 60.0%
AATGCAAGGACAGGGGGTGG+AGG + chr1_1:39039807-39039826 None:intergenic 60.0%
CCAAATGCAAGGACAGGGGG+TGG + chr1_1:39039810-39039829 None:intergenic 60.0%
CCACCCCCTGTCCTTGCATT+TGG - chr1_1:39039807-39039826 Msa0021710:intron 60.0%
GCAATTGGGCGCTTGGAAGC+TGG - chr1_1:39041565-39041584 Msa0021710:intron 60.0%
TCGGGTTCCTGCTCAAAGGG+TGG - chr1_1:39042010-39042029 Msa0021710:intron 60.0%
GGTTCCTGCTCAAAGGGTGG+AGG - chr1_1:39042013-39042032 Msa0021710:intron 60.0%
CTGCTCAAAGGGTGGAGGCT+GGG - chr1_1:39042018-39042037 Msa0021710:intron 60.0%
TGCTCAAAGGGTGGAGGCTG+GGG - chr1_1:39042019-39042038 Msa0021710:intron 60.0%
ATCCCAACCCGTGGCCTACT+TGG - chr1_1:39044357-39044376 Msa0021710:intron 60.0%
CCGCAATCCAAGTAGGCCAC+GGG + chr1_1:39044367-39044386 None:intergenic 60.0%
CCCGTGGCCTACTTGGATTG+CGG - chr1_1:39044364-39044383 Msa0021710:intron 60.0%
GATTCCTATGGGCCTTGGGC+TGG - chr1_1:39044438-39044457 Msa0021710:intron 60.0%
TCGCGAGTTCACAGGAGAGG+GGG - chr1_1:39044637-39044656 Msa0021710:CDS 60.0%
TGGCATCCATCAACGCCCTG+GGG - chr1_1:39044707-39044726 Msa0021710:intron 60.0%
!! ACAAGTCCCCAGGGCGTTGA+TGG + chr1_1:39044716-39044735 None:intergenic 60.0%
CCAGCCTCCACCCTTTGAGC+AGG + chr1_1:39042020-39042039 None:intergenic 65.0%
CCTGCTCAAAGGGTGGAGGC+TGG - chr1_1:39042017-39042036 Msa0021710:intron 65.0%
GTCACCAGCCCAAGGCCCAT+AGG + chr1_1:39044445-39044464 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 39038901 39046352 39038901 ID=Msa0021710;Name=Msa0021710
chr1_1 mRNA 39038901 39046352 39038901 ID=Msa0021710-mRNA-1;Parent=Msa0021710;Name=Msa0021710-mRNA-1;_AED=0.09;_eAED=0.09;_QI=199|1|1|1|1|1|14|671|676
chr1_1 exon 39038901 39039705 39038901 ID=Msa0021710-mRNA-1:exon:12012;Parent=Msa0021710-mRNA-1
chr1_1 exon 39040458 39040653 39040458 ID=Msa0021710-mRNA-1:exon:12011;Parent=Msa0021710-mRNA-1
chr1_1 exon 39040762 39040927 39040762 ID=Msa0021710-mRNA-1:exon:12010;Parent=Msa0021710-mRNA-1
chr1_1 exon 39041648 39041742 39041648 ID=Msa0021710-mRNA-1:exon:12009;Parent=Msa0021710-mRNA-1
chr1_1 exon 39042488 39042572 39042488 ID=Msa0021710-mRNA-1:exon:12008;Parent=Msa0021710-mRNA-1
chr1_1 exon 39042646 39042797 39042646 ID=Msa0021710-mRNA-1:exon:12007;Parent=Msa0021710-mRNA-1
chr1_1 exon 39042986 39043102 39042986 ID=Msa0021710-mRNA-1:exon:12006;Parent=Msa0021710-mRNA-1
chr1_1 exon 39043177 39043311 39043177 ID=Msa0021710-mRNA-1:exon:12005;Parent=Msa0021710-mRNA-1
chr1_1 exon 39043638 39043727 39043638 ID=Msa0021710-mRNA-1:exon:12004;Parent=Msa0021710-mRNA-1
chr1_1 exon 39044153 39044305 39044153 ID=Msa0021710-mRNA-1:exon:12003;Parent=Msa0021710-mRNA-1
chr1_1 exon 39044499 39044675 39044499 ID=Msa0021710-mRNA-1:exon:12002;Parent=Msa0021710-mRNA-1
chr1_1 exon 39044905 39045108 39044905 ID=Msa0021710-mRNA-1:exon:12001;Parent=Msa0021710-mRNA-1
chr1_1 exon 39045745 39045854 39045745 ID=Msa0021710-mRNA-1:exon:12000;Parent=Msa0021710-mRNA-1
chr1_1 exon 39045937 39046352 39045937 ID=Msa0021710-mRNA-1:exon:11999;Parent=Msa0021710-mRNA-1
chr1_1 five_prime_UTR 39046154 39046352 39046154 ID=Msa0021710-mRNA-1:five_prime_utr;Parent=Msa0021710-mRNA-1
chr1_1 CDS 39045937 39046153 39045937 ID=Msa0021710-mRNA-1:cds;Parent=Msa0021710-mRNA-1
chr1_1 CDS 39045745 39045854 39045745 ID=Msa0021710-mRNA-1:cds;Parent=Msa0021710-mRNA-1
chr1_1 CDS 39044905 39045108 39044905 ID=Msa0021710-mRNA-1:cds;Parent=Msa0021710-mRNA-1
chr1_1 CDS 39044499 39044675 39044499 ID=Msa0021710-mRNA-1:cds;Parent=Msa0021710-mRNA-1
chr1_1 CDS 39044153 39044305 39044153 ID=Msa0021710-mRNA-1:cds;Parent=Msa0021710-mRNA-1
chr1_1 CDS 39043638 39043727 39043638 ID=Msa0021710-mRNA-1:cds;Parent=Msa0021710-mRNA-1
chr1_1 CDS 39043177 39043311 39043177 ID=Msa0021710-mRNA-1:cds;Parent=Msa0021710-mRNA-1
chr1_1 CDS 39042986 39043102 39042986 ID=Msa0021710-mRNA-1:cds;Parent=Msa0021710-mRNA-1
chr1_1 CDS 39042646 39042797 39042646 ID=Msa0021710-mRNA-1:cds;Parent=Msa0021710-mRNA-1
chr1_1 CDS 39042488 39042572 39042488 ID=Msa0021710-mRNA-1:cds;Parent=Msa0021710-mRNA-1
chr1_1 CDS 39041648 39041742 39041648 ID=Msa0021710-mRNA-1:cds;Parent=Msa0021710-mRNA-1
chr1_1 CDS 39040762 39040927 39040762 ID=Msa0021710-mRNA-1:cds;Parent=Msa0021710-mRNA-1
chr1_1 CDS 39040458 39040653 39040458 ID=Msa0021710-mRNA-1:cds;Parent=Msa0021710-mRNA-1
chr1_1 CDS 39039572 39039705 39039572 ID=Msa0021710-mRNA-1:cds;Parent=Msa0021710-mRNA-1
chr1_1 three_prime_UTR 39038901 39039571 39038901 ID=Msa0021710-mRNA-1:three_prime_utr;Parent=Msa0021710-mRNA-1
Gene Sequence

>Msa0021710

ATGGAGAAAATGGCACTTACTGTTCAAAACTCTTCATTATTATTCTCATCCTTAACACTTCCAAAGAAAAACTCTTCTTCTCCACTTTTCTTCAATAAACGTAACAAGCTCTTTGGACTTCCCTTATCTTCTTCCAAACCAACTCTTCGAATTGCTTCAAGGAACAATAAAGCAATTAAATGTTCAATTTCAGAAGTCACAGAAGAGCCTAAAACTGAGGAGAAGAAGAAATTGATGAGAAGAGCAGATATTAGAAATATTGCGATTGTTGCTCATGTTGATCATGGTAAAACAACTCTCGTTGATGCTATGCTCAAACAAACTAAGGTGTTTCGTGATAATCAAACTGTACAAGAAAGGATAATGGACTCTAATGATTTGGAGCGTGAAAGAGGAATCACTATACTGAGTAAAAATACATCTGTGACTTATAAAGATGCCAAGATTAATATAATTGATACTCCAGGTCACTCTGATTTTGGGGGTGAAGTAGAGCGCATCTTGAATATGGTCGAAGGAATTCTTCTAGTGGTAGATTCTGTTGAAGGGCCAATGCCACAGACAAGATTTGTCTTGAAGAAGGCTTTAGAGTTTGGCCATGCGGTTGTTGTGGTTGTGAATAAAATAGACAGGTCTTCTGCTCGCCCTGATTTTGTCGTCAATTCTACTTTTGAACTCTTCATTGAACTAAATGCAACAGATGAACAGTGTGACTTTCAGGTAATATATGCAAGTGGTATAAAAGGGAAAGCAGGGTTGTCTCCTGAAGATCTGGCAGACGACCTTGGGCCATTATTTGAATCAATCATGAGATGTATCCCTGGACCGCGTATTGATAAAGATGGCTCACTCCAAATGCTTGTTACAAGTACCGAGTACGAGGGACATAAAGGACGTATAGCAATTGGGCGCTTGGAAGCTGGAGTTTTAGAAAAAGGCATGGAAGTCAAGGTTTGTACCTCAGAAGATTCATGTAGATATGCAAGAGTTAGTGAGCTTTACGTGTATGAAAAATTCTTTCGGGTTCCTGCTCAAAGGGTGGAGGCTGGGGATATATGTGCAGTATGTGGAATTTCTGATGTTCAGATTGGGGAGACAATTGCGGATAAATTGACTGGAAAGGCACTACCTTCCATCAAAGTGGAAGAACCAACAGTGAAAATGTCTTTCTCCATAAACACATCGCCTTTTGTTGGTCGTGAGGGAAAGTATGTTACCAGTAGGAATTTAAGGGACAGGCTTTATCGTGAACTTGAGCGAAATCTGGCTATGAAGGTTGAAGATGGTGAAACAGCCGATACATTCATTGTCAGTGGACGTGGAACACTGCATATCACTATACTCATTGAAAATATGCGAAGGGAAGGATACGAATTCATGGTTGGGCCTCCCAAAGTTATCAACAAGAAGGTTGATGACAAAGTGTTGGAGCCGTATGAGATTGCAACTGTGGAGGTACCGGAAGAGCATATGGGATCTGTTGTTGAACTTCTTGGCCAGAGACGAGGGCAAATGTTCGACATGCAAGGAGTTGGATCGGAGGGAACTAACCTACTCAAATATAAGATCCCAACCCGTGGCCTACTTGGATTGCGGAATGCAATTTTAACTGCTTCCCGAGGGACAGCTATCCTCAACACTATCTTCGATTCCTATGGGCCTTGGGCTGGTGACATGAGTACTCGGGATTTAGGCTCGCTGGTTGCTTTCGAAAATGGAACAGTTACTTCTTATGCAATCGCGAGTTCACAGGAGAGGGGGCAGATGTTTGTTGGTCCAGGAGCGGAAGTTTATAAAGGTCAAATTATTGGCATCCATCAACGCCCTGGGGACTTGTCCTTGAATGTTTGCAAGAAAAAAGCTGCAACGAACATACGTTCCAACAAGGAACAATCAGTGATTCTTGATACACCATTGGATTACAGTTTGGATGACTGCATTGAATACATCCAAGAAGATGAACTAGTAGAGGTCACCCCCCAAAGTATAAGAATGTTGAAGAATCCAAAATTTGCAAAGAAAGGAAGGTAA
Protein sequence

>Msa0021710

MEKMALTVQNSSLLFSSLTLPKKNSSSPLFFNKRNKLFGLPLSSSKPTLRIASRNNKAIKCSISEVTEEPKTEEKKKLMRRADIRNIAIVAHVDHGKTTLVDAMLKQTKVFRDNQTVQERIMDSNDLERERGITILSKNTSVTYKDAKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRSSARPDFVVNSTFELFIELNATDEQCDFQVIYASGIKGKAGLSPEDLADDLGPLFESIMRCIPGPRIDKDGSLQMLVTSTEYEGHKGRIAIGRLEAGVLEKGMEVKVCTSEDSCRYARVSELYVYEKFFRVPAQRVEAGDICAVCGISDVQIGETIADKLTGKALPSIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPKVINKKVDDKVLEPYEIATVEVPEEHMGSVVELLGQRRGQMFDMQGVGSEGTNLLKYKIPTRGLLGLRNAILTASRGTAILNTIFDSYGPWAGDMSTRDLGSLVAFENGTVTSYAIASSQERGQMFVGPGAEVYKGQIIGIHQRPGDLSLNVCKKKAATNIRSNKEQSVILDTPLDYSLDDCIEYIQEDELVEVTPQSIRMLKNPKFAKKGR*