AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0622250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0622250 MtrunA17_Chr7g0269591 98.880 625 7 0 1 625 1 625 0.0 1291
Msa0622250 MtrunA17_Chr8g0344131 38.810 353 189 8 146 497 221 547 3.74e-63 223
Msa0622250 MtrunA17_Chr4g0069291 30.395 329 199 7 175 492 120 429 3.23e-38 149
Msa0622250 MtrunA17_Chr5g0395711 37.054 224 129 5 126 339 108 329 4.49e-35 142
Msa0622250 MtrunA17_Chr5g0395711 36.364 121 71 2 377 497 451 565 6.66e-16 82.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0622250 AT4G02260.4 73.291 629 162 5 1 625 1 627 0.0 939
Msa0622250 AT4G02260.2 73.291 629 162 5 1 625 1 627 0.0 938
Msa0622250 AT4G02260.3 73.291 629 162 5 1 625 1 627 0.0 938
Msa0622250 AT4G02260.1 73.175 630 162 6 1 625 1 628 0.0 934
Msa0622250 AT1G54130.1 38.592 355 191 8 144 497 211 539 4.49e-64 225
Msa0622250 AT3G14050.1 39.045 356 184 9 146 497 209 535 7.40e-64 224
Msa0622250 AT3G17470.3 31.288 326 198 11 180 495 122 431 3.08e-37 145
Msa0622250 AT3G17470.1 30.532 357 213 13 180 526 122 453 6.09e-37 146
Msa0622250 AT3G17470.2 30.532 357 213 13 180 526 137 468 6.61e-37 146

Find 243 sgRNAs with CRISPR-Local

Find 591 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCAGGACTTCTTTATATTT+TGG 0.117821 4_2:+74599941 None:intergenic
TGAAGGAAATTTAGAAAATT+TGG 0.135903 4_2:-74599303 Msa0622250:intron
GGACCTTCGGCAAATGTTTC+TGG 0.140517 4_2:-74605237 Msa0622250:CDS
ACTGCCTGCTGCCGGCTTAT+TGG 0.169000 4_2:+74598916 None:intergenic
ACATTTATATGTCTAAATTT+TGG 0.179818 4_2:-74598975 Msa0622250:three_prime_UTR
GCAGATTTGCTATCATGTTC+TGG 0.190657 4_2:-74602562 Msa0622250:intron
CTGCCTGCTGCCGGCTTATT+GGG 0.208464 4_2:+74598917 None:intergenic
GTTTATTGAAATGCGGATTC+TGG 0.208918 4_2:-74598624 Msa0622250:three_prime_UTR
CAAAGCAAACCTGTGCAATT+TGG 0.221140 4_2:+74602835 None:intergenic
TCCTCTGTTTCTCTCAATTA+TGG 0.228332 4_2:-74607259 Msa0622250:exon
CACTGTTACAAGAGATCTTC+TGG 0.241677 4_2:-74601734 Msa0622250:CDS
GAGAGGATAGAGGAGGAATT+TGG 0.243763 4_2:-74605481 Msa0622250:CDS
TGGACTAACTCCAGTTCTTT+AGG 0.245830 4_2:+74605903 None:intergenic
AGATCAAATACCGGGTGTTT+TGG 0.268009 4_2:-74599157 Msa0622250:three_prime_UTR
CCAGTAGCTCCAAACATAAA+AGG 0.272058 4_2:-74600162 Msa0622250:three_prime_UTR
TATATGATACACACTGAAAT+TGG 0.278187 4_2:-74601498 Msa0622250:CDS
TTCACCTTTGCATAATCTTC+AGG 0.279113 4_2:+74603400 None:intergenic
GTTTGTTATCTGTCTTTCTT+TGG 0.279933 4_2:-74607451 Msa0622250:five_prime_UTR
GCTTGGGATGTATCAAATTA+AGG 0.281559 4_2:-74603659 Msa0622250:intron
CTCCTTTGGCAAAGTTGCTT+GGG 0.299059 4_2:-74603675 Msa0622250:CDS
CTGTGTGTAAAGAGCCTTAC+AGG 0.317355 4_2:-74603086 Msa0622250:intron
GTTGAGGTTGCACGGATTCT+TGG 0.319585 4_2:-74605686 Msa0622250:CDS
CTTTCTCATGTTCTTTGAAT+AGG 0.319692 4_2:+74603362 None:intergenic
CAGATTTGCTATCATGTTCT+GGG 0.322566 4_2:-74602561 Msa0622250:CDS
GAAGATGGTTATTGCGGTTA+TGG 0.323552 4_2:+74607357 None:intergenic
TACATACAGATCTAGGAATA+GGG 0.332916 4_2:+74602517 None:intergenic
CCTCCATAACCTATCATTCA+TGG 0.340153 4_2:-74607302 Msa0622250:five_prime_UTR
ATTACAGGTATTTGCTCCTT+TGG 0.341930 4_2:-74603689 Msa0622250:CDS
GCTCCTTTGGCAAAGTTGCT+TGG 0.345703 4_2:-74603676 Msa0622250:CDS
AGAAAAGAGTGATAGGATAA+AGG 0.346272 4_2:-74598846 Msa0622250:three_prime_UTR
TTGTGTGGACCGAGCGTAAC+AGG 0.346600 4_2:-74607499 Msa0622250:five_prime_UTR
ATACATACAGATCTAGGAAT+AGG 0.350804 4_2:+74602516 None:intergenic
GCCTCGTGGCACAATATAGA+AGG 0.351249 4_2:-74599887 Msa0622250:three_prime_UTR
AGTGGGAGAGAATTCGTTAC+TGG 0.356793 4_2:-74602070 Msa0622250:CDS
AGCTTACCGTAAAAGCATTA+TGG 0.356855 4_2:+74605883 None:intergenic
TTCTTGAATGCTAGATGATT+TGG 0.366759 4_2:-74599086 Msa0622250:three_prime_UTR
CATTTGTCCAGGAACTTGAT+TGG 0.368685 4_2:-74605564 Msa0622250:intron
CAAAGCCGTGCGTTGGGGTT+GGG 0.369858 4_2:-74602702 Msa0622250:CDS
ATTCCATGAATGATAGGTTA+TGG 0.371415 4_2:+74607299 None:intergenic
TATGTATATAAAAGAAGAAA+TGG 0.372548 4_2:+74598653 None:intergenic
TGTACCTCCCACAAACTTCC+AGG 0.375552 4_2:+74606075 None:intergenic
ATTGCAACCCCTAAACCTAA+TGG 0.376245 4_2:-74602368 Msa0622250:CDS
ATTGTTAACTTGAATCATAT+TGG 0.380037 4_2:+74599964 None:intergenic
CATTGCAATGGAGACATTAC+AGG 0.381847 4_2:-74603704 Msa0622250:CDS
GGCTTATTGGGTTAGTGAGT+TGG 0.383188 4_2:+74598929 None:intergenic
TTAAACCAAAGCCGTGCGTT+GGG 0.385297 4_2:-74602708 Msa0622250:CDS
CAATGATTACAGATCAGTTC+TGG 0.385820 4_2:-74599025 Msa0622250:three_prime_UTR
TGGGGTTGATCCATGGAATC+TGG 0.390644 4_2:-74602542 Msa0622250:CDS
GGTCTAAGAATTGATCATCT+TGG 0.398616 4_2:+74603136 None:intergenic
GATTGAATTCCATGAATGAT+AGG 0.398665 4_2:+74607293 None:intergenic
ACACTTCACGAGGGATTCTC+TGG 0.400032 4_2:-74606183 Msa0622250:CDS
TATGTTCAGGCTTGAAATAC+AGG 0.403830 4_2:-74602300 Msa0622250:intron
GTAGATTAGAACAGAAGAAA+TGG 0.405177 4_2:-74602128 Msa0622250:intron
CCAACCCCAACGCACGGCTT+TGG 0.406391 4_2:+74602703 None:intergenic
ATGGCAGTTGTCTTGTTCTT+CGG 0.412219 4_2:-74606130 Msa0622250:CDS
TTTATTGAAATGCGGATTCT+GGG 0.416403 4_2:-74598623 Msa0622250:three_prime_UTR
CATGAGCTCTAGGGAATTTG+TGG 0.417115 4_2:-74601758 Msa0622250:CDS
AAATCTCCTAGGGTTCTTAC+CGG 0.417218 4_2:-74606851 Msa0622250:CDS
ACATATGCCTCCACATAAAC+AGG 0.418695 4_2:-74605027 Msa0622250:intron
GTGTGAATGTATGCAATTCT+TGG 0.422183 4_2:-74606925 Msa0622250:CDS
CTCAATTGACTGCCTGCTGC+CGG 0.422716 4_2:+74598908 None:intergenic
ACCAGCTGTGGACTGCATAA+AGG 0.423090 4_2:+74602679 None:intergenic
AACGACCAGGCTGAGGTTGA+TGG 0.426492 4_2:-74599359 Msa0622250:intron
TGTATATAGAAAAGAGTGAT+AGG 0.427510 4_2:-74598853 Msa0622250:three_prime_UTR
GGACGAAACTGTAGTGAGTA+TGG 0.428483 4_2:+74599047 None:intergenic
GGCATTGCAGCTCACTATAG+TGG 0.428991 4_2:-74602088 Msa0622250:CDS
ATTTGTCCAGGAACTTGATT+GGG 0.429628 4_2:-74605563 Msa0622250:intron
TGTGACGCCAAGTGCTTTGT+CGG 0.430385 4_2:+74606203 None:intergenic
CAGAACTGATCTGTAATCAT+TGG 0.430971 4_2:+74599026 None:intergenic
CTAGATTTGCATCTAGAGAA+TGG 0.434783 4_2:-74606149 Msa0622250:CDS
CAGTAGCTCCAAACATAAAA+GGG 0.435513 4_2:-74600161 Msa0622250:three_prime_UTR
GTATCTTCCTCCTAAAGAAC+TGG 0.435659 4_2:-74605913 Msa0622250:CDS
AGAATCCGTGCAACCTCAAC+CGG 0.436241 4_2:+74605689 None:intergenic
TCCCAACTAGGTGTCAAAGC+TGG 0.436553 4_2:-74605312 Msa0622250:intron
AACAATTATTTCAGGCATGA+TGG 0.437402 4_2:-74599549 Msa0622250:intron
GATTGGGAGTCAATTGCTGC+TGG 0.437948 4_2:-74605547 Msa0622250:CDS
TTGCAACCCCTAAACCTAAT+GGG 0.442273 4_2:-74602367 Msa0622250:CDS
CAAGCACTTTATCACACGTT+TGG 0.445614 4_2:+74598747 None:intergenic
GCTTCTGCACCTTTCATGTC+AGG 0.448291 4_2:-74607237 Msa0622250:intron
TCCTGCCAGGTTTAGAAAGT+TGG 0.448380 4_2:-74599925 Msa0622250:three_prime_UTR
AACAAAATACATACAGATCT+AGG 0.449095 4_2:+74602510 None:intergenic
GCCTTTATGCAGTCCACAGC+TGG 0.449575 4_2:-74602680 Msa0622250:intron
CCAAAGCCGTGCGTTGGGGT+TGG 0.452445 4_2:-74602703 Msa0622250:CDS
GAGAGAATTCGTTACTGGCT+TGG 0.454991 4_2:-74602065 Msa0622250:CDS
CTTCATCATTCATCCGGTTG+AGG 0.455435 4_2:-74605702 Msa0622250:CDS
TGATAGGTTATGGAGGAGAA+GGG 0.455820 4_2:+74607309 None:intergenic
GTTATGTTATTTCAAGTTGA+AGG 0.457526 4_2:-74599320 Msa0622250:three_prime_UTR
GCTGAGGTTGATGGCGGAAG+GGG 0.457562 4_2:-74599350 Msa0622250:three_prime_UTR
ATGTAAATTTGAAGGGCAAA+GGG 0.462707 4_2:-74600015 Msa0622250:three_prime_UTR
ATGGAAATTACCTGTTTATG+TGG 0.465464 4_2:+74605017 None:intergenic
TCTTGGAGAGGGGATGGAAA+TGG 0.467748 4_2:-74606908 Msa0622250:CDS
CCCAACTAGGTGTCAAAGCT+GGG 0.468219 4_2:-74605311 Msa0622250:intron
ATGTGAAAGCAGAGGACCTT+CGG 0.473982 4_2:-74605250 Msa0622250:CDS
AGGCTGAGGTTGATGGCGGA+AGG 0.474494 4_2:-74599352 Msa0622250:three_prime_UTR
ATGATAGGTTATGGAGGAGA+AGG 0.478020 4_2:+74607308 None:intergenic
TCTAATTGCATCAGGACCTT+AGG 0.478487 4_2:-74605947 Msa0622250:intron
AGACCTTATGACAGTTAAAA+CGG 0.479370 4_2:-74603118 Msa0622250:CDS
CATGTGCGTCGAAATCTCCT+AGG 0.479666 4_2:-74606862 Msa0622250:CDS
ATCCACTGTTACCTCTCCAC+TGG 0.480367 4_2:+74601687 None:intergenic
ATTTACACAAGGAGCTTGCT+AGG 0.482615 4_2:-74598795 Msa0622250:three_prime_UTR
CGTGCATCATGTAAATTTGA+AGG 0.483447 4_2:-74600023 Msa0622250:three_prime_UTR
TTGTTGGCAACATGAGCTCT+AGG 0.486743 4_2:-74601768 Msa0622250:CDS
ACTGTCCTTCAGAGTAAGAA+TGG 0.489568 4_2:-74600088 Msa0622250:three_prime_UTR
GATCAGGAAGCTTACCTCTT+CGG 0.489957 4_2:+74599828 None:intergenic
CTCTAGAGTAGATCAAATAC+CGG 0.491186 4_2:-74599166 Msa0622250:three_prime_UTR
GAAGAAGAAGAGAGTGAGAG+TGG 0.495102 4_2:+74607389 None:intergenic
CAAAGGGGACATGATGCTGC+AGG 0.497067 4_2:-74599999 Msa0622250:three_prime_UTR
GCTTGGACACCCAAGGTCAA+TGG 0.497685 4_2:-74600061 Msa0622250:three_prime_UTR
GGCTGAGGTTGATGGCGGAA+GGG 0.499777 4_2:-74599351 Msa0622250:three_prime_UTR
GAATTCGTTACTGGCTTGGT+TGG 0.500544 4_2:-74602061 Msa0622250:CDS
GAAGGGGAAGAGAATTGAAT+CGG 0.501625 4_2:+74607326 None:intergenic
CATGTTCTGGGGTTGATCCA+TGG 0.504046 4_2:-74602549 Msa0622250:CDS
GTGCTTGGTATAATGAGGAT+AGG 0.504068 4_2:-74598731 Msa0622250:three_prime_UTR
CTTGAATCATATTGGCGACA+TGG 0.505746 4_2:+74599972 None:intergenic
ACTTTCTCAGTGATTCTGAC+GGG 0.507221 4_2:-74600216 Msa0622250:three_prime_UTR
AGAAGCGAGTGAGTTGAGAG+AGG 0.509407 4_2:+74607422 None:intergenic
CTCAACCGGATGAATGATGA+AGG 0.509670 4_2:+74605703 None:intergenic
CGAACCCTTCATCATTCATC+CGG 0.509821 4_2:-74605708 Msa0622250:CDS
GAGTGGCAAGAAGAGTTTGT+TGG 0.510210 4_2:-74601784 Msa0622250:CDS
AGAGTAAGAATGGAAGTGCT+TGG 0.510899 4_2:-74600078 Msa0622250:three_prime_UTR
GGTTGATGGCGGAAGGGGAA+TGG 0.511538 4_2:-74599345 Msa0622250:three_prime_UTR
TACCGGCTTTCTTGCGAGCA+CGG 0.511790 4_2:-74606834 Msa0622250:CDS
TTCATCCGGTTGAGGTTGCA+CGG 0.513436 4_2:-74605694 Msa0622250:CDS
GGCTGAGGTCGCTACAGCAT+TGG 0.515456 4_2:-74599528 Msa0622250:three_prime_UTR
TTATCGTCAAATTAGCAGAC+AGG 0.517261 4_2:-74605073 Msa0622250:CDS
ATTAAACCAAAGCCGTGCGT+TGG 0.519871 4_2:-74602709 Msa0622250:CDS
TGCAATTCTTGGAGAGGGGA+TGG 0.519916 4_2:-74606914 Msa0622250:CDS
TAACCCAATAAGCCGGCAGC+AGG 0.520630 4_2:-74598920 Msa0622250:three_prime_UTR
GATAGGTTATGGAGGAGAAG+GGG 0.522033 4_2:+74607310 None:intergenic
TGAGATTAACCAAATTGCAC+AGG 0.524101 4_2:-74602844 Msa0622250:intron
TCATATTCCGACAAAGCACT+TGG 0.525417 4_2:-74606210 Msa0622250:CDS
AAATATAAAGAAGTCCTGCC+AGG 0.526449 4_2:-74599938 Msa0622250:three_prime_UTR
GATTTGGTTGCAGTTGCACT+AGG 0.526451 4_2:-74599070 Msa0622250:three_prime_UTR
GATGGTCTACTGGCTGTAGT+TGG 0.526752 4_2:-74599134 Msa0622250:three_prime_UTR
CATTGTGGAAGGAGAGACTA+AGG 0.527478 4_2:-74605443 Msa0622250:intron
TGCTTGGTATAATGAGGATA+GGG 0.528040 4_2:-74598730 Msa0622250:three_prime_UTR
GCATTTGCAAGCACTCGTGC+AGG 0.528305 4_2:+74601323 None:intergenic
GAAGCGAGTGAGTTGAGAGA+GGG 0.528650 4_2:+74607423 None:intergenic
GAATCGGAAAATCGAGAAGA+TGG 0.528808 4_2:+74607342 None:intergenic
GAGTGAGTTGAGAGAGGGTG+AGG 0.528895 4_2:+74607428 None:intergenic
CTGTAGTTGGCCAAGCCTGA+TGG 0.529497 4_2:-74599121 Msa0622250:three_prime_UTR
CAACAAGATGGTAGCTGCAA+AGG 0.530841 4_2:-74601475 Msa0622250:intron
GTTTCGTGGATTAACCTGTA+AGG 0.534166 4_2:+74603072 None:intergenic
CATGTAAATTTGAAGGGCAA+AGG 0.535165 4_2:-74600016 Msa0622250:three_prime_UTR
CTCATGTTCTTTGAATAGGT+CGG 0.536108 4_2:+74603366 None:intergenic
GAATAGGGGTCCAGATTCCA+TGG 0.537999 4_2:+74602532 None:intergenic
TGCATACAACAGATAACCAT+TGG 0.538972 4_2:+74599855 None:intergenic
GCCAACTTTCTAAACCTGGC+AGG 0.545096 4_2:+74599924 None:intergenic
TGCAAGACACAAAATAATGA+AGG 0.547606 4_2:-74600415 Msa0622250:intron
GCTTGCCAACTTTCTAAACC+TGG 0.549616 4_2:+74599920 None:intergenic
AGCCGTGCTCGCAAGAAAGC+CGG 0.550935 4_2:+74606832 None:intergenic
TTTGTACCCATTAGGTTTAG+GGG 0.551930 4_2:+74602361 None:intergenic
TATTTCAGGCATGATGGCTG+AGG 0.552186 4_2:-74599543 Msa0622250:intron
AGAAAGCCGGTAAGAACCCT+AGG 0.552414 4_2:+74606845 None:intergenic
GATACGAGATCACGGGCCTA+AGG 0.552517 4_2:+74605931 None:intergenic
ACTGTTACAAGAGATCTTCT+GGG 0.552683 4_2:-74601733 Msa0622250:CDS
CACTTCCATTCTTACTCTGA+AGG 0.552893 4_2:+74600083 None:intergenic
CAAACGTGTGATAAAGTGCT+TGG 0.554082 4_2:-74598746 Msa0622250:three_prime_UTR
TACAACAGATAACCATTGGA+TGG 0.554913 4_2:+74599859 None:intergenic
AATAGAAAACATACTGGGTG+AGG 0.556986 4_2:+74601258 None:intergenic
GCGTACTCTGAGTGCAATGT+TGG 0.561487 4_2:+74601982 None:intergenic
CACTGAAATTGGCAACAAGA+TGG 0.562829 4_2:-74601487 Msa0622250:CDS
ACTTCCAGGGGAAAACTCGC+TGG 0.564635 4_2:+74606089 None:intergenic
AATGGATTTGATAGCTGAGA+GGG 0.567318 4_2:-74602110 Msa0622250:CDS
GGGTAAGTGGTTACCAGCTG+TGG 0.569013 4_2:+74602667 None:intergenic
GACTTTCTCAGTGATTCTGA+CGG 0.576627 4_2:-74600217 Msa0622250:three_prime_UTR
TTTCAGAAACTCAAAACTGA+AGG 0.578494 4_2:-74598879 Msa0622250:three_prime_UTR
TGCTGGATTACTTCATGACA+CGG 0.579642 4_2:-74605530 Msa0622250:CDS
GAAATTACCTGTTTATGTGG+AGG 0.581208 4_2:+74605020 None:intergenic
TAAACCAAAGCCGTGCGTTG+GGG 0.582851 4_2:-74602707 Msa0622250:CDS
ATGTATGCAATTCTTGGAGA+GGG 0.584331 4_2:-74606919 Msa0622250:CDS
ATGAGATATCCTGTTACGCT+CGG 0.584605 4_2:+74607490 None:intergenic
TGTTGGCAACATGAGCTCTA+GGG 0.586013 4_2:-74601767 Msa0622250:CDS
GTCTTTGTATTTACACCCAG+TGG 0.587156 4_2:-74601703 Msa0622250:CDS
ACTCACCACACAAGAACATA+CGG 0.588943 4_2:+74599490 None:intergenic
TTCCCCTGGAAGTTTGTGGG+AGG 0.589656 4_2:-74606079 Msa0622250:intron
GCCATAATTGAGAGAAACAG+AGG 0.590903 4_2:+74607258 None:intergenic
GCTTGCAAATGCAGAAGTTG+TGG 0.591891 4_2:-74601312 Msa0622250:CDS
AATCGAGAAGATGGTTATTG+CGG 0.592306 4_2:+74607351 None:intergenic
TGTACAGAATAGCATTGCAA+TGG 0.595760 4_2:-74603716 Msa0622250:intron
AACTCACTAACCCAATAAGC+CGG 0.596525 4_2:-74598927 Msa0622250:three_prime_UTR
GCATTGCAGCTCACTATAGT+GGG 0.596921 4_2:-74602087 Msa0622250:CDS
AAAGGCCCAACCCCAACGCA+CGG 0.597406 4_2:+74602697 None:intergenic
GTACCTCCCACAAACTTCCA+GGG 0.597986 4_2:+74606076 None:intergenic
TTAGGTTTAATGCAGGTCAA+CGG 0.603196 4_2:-74601359 Msa0622250:intron
ACATACAGATCTAGGAATAG+GGG 0.604280 4_2:+74602518 None:intergenic
GGAGGAAGATACGAGATCAC+GGG 0.606559 4_2:+74605924 None:intergenic
TAGAAGGGCATTCCATCCAA+TGG 0.607450 4_2:-74599871 Msa0622250:three_prime_UTR
AGGAGGAAGATACGAGATCA+CGG 0.607622 4_2:+74605923 None:intergenic
TATAAATGTCTGCGCTTCTG+CGG 0.609744 4_2:+74598989 None:intergenic
ATGTGCGTCGAAATCTCCTA+GGG 0.610172 4_2:-74606861 Msa0622250:CDS
GTGCATCATGTAAATTTGAA+GGG 0.610778 4_2:-74600022 Msa0622250:three_prime_UTR
TGGAAGTGCTTGGACACCCA+AGG 0.611288 4_2:-74600068 Msa0622250:three_prime_UTR
TAGATTAAGAATCTTCCTCA+AGG 0.612482 4_2:-74601543 Msa0622250:CDS
AATGTTTCTGGCTATGACAG+AGG 0.612713 4_2:-74605225 Msa0622250:CDS
TGTATTTACACCCAGTGGAG+AGG 0.615293 4_2:-74601698 Msa0622250:intron
ACTAACTCCAGTTCTTTAGG+AGG 0.618244 4_2:+74605906 None:intergenic
ATCCCAAGCAACTTTGCCAA+AGG 0.618298 4_2:+74603673 None:intergenic
CCTCGTGGCACAATATAGAA+GGG 0.619462 4_2:-74599886 Msa0622250:three_prime_UTR
AAAGGGGACATGATGCTGCA+GGG 0.620819 4_2:-74599998 Msa0622250:three_prime_UTR
AAACTCGCTGGCAACGTCCG+AGG 0.623661 4_2:+74606101 None:intergenic
GAAAATATTATTGAACGGTG+TGG 0.624304 4_2:-74600137 Msa0622250:three_prime_UTR
TCCACTGTTACCTCTCCACT+GGG 0.626056 4_2:+74601688 None:intergenic
GGCTCAATGCTATTAGAGAG+TGG 0.627954 4_2:-74601801 Msa0622250:CDS
AGATTTGCTATCATGTTCTG+GGG 0.632012 4_2:-74602560 Msa0622250:CDS
ACAGTGCGTCACATTGTGGA+AGG 0.639089 4_2:-74605454 Msa0622250:CDS
CCATGAATGATAGGTTATGG+AGG 0.640323 4_2:+74607302 None:intergenic
TTCTGTAGTGATATCAGCAG+CGG 0.640815 4_2:+74600249 None:intergenic
TGCTACAGTGCGTCACATTG+TGG 0.642347 4_2:-74605458 Msa0622250:CDS
CTTTCTCAGTGATTCTGACG+GGG 0.642676 4_2:-74600215 Msa0622250:three_prime_UTR
TGTAAATTTGAAGGGCAAAG+GGG 0.645718 4_2:-74600014 Msa0622250:three_prime_UTR
ACATACGGCTATGTCTGAAG+TGG 0.647289 4_2:+74599505 None:intergenic
AAATCCTGAAGATTATGCAA+AGG 0.647444 4_2:-74603404 Msa0622250:CDS
ATAAAGTGCTTGGTATAATG+AGG 0.648471 4_2:-74598736 Msa0622250:three_prime_UTR
AGTAGCTCCAAACATAAAAG+GGG 0.650201 4_2:-74600160 Msa0622250:three_prime_UTR
CCCTTCTATATTGTGCCACG+AGG 0.652703 4_2:+74599886 None:intergenic
TCTAGCATTCAAGAACGCCA+TGG 0.653651 4_2:+74599094 None:intergenic
TCAATCACAGTAGCACCTTG+AGG 0.657313 4_2:+74601528 None:intergenic
TCTAGAGTAGATCAAATACC+GGG 0.659498 4_2:-74599165 Msa0622250:three_prime_UTR
GTTGTATGCATAGACCGAAG+AGG 0.660812 4_2:-74599842 Msa0622250:intron
TAGCCAGAAACATTTGCCGA+AGG 0.661863 4_2:+74605234 None:intergenic
GACCAGGCTGAGGTTGATGG+CGG 0.663709 4_2:-74599356 Msa0622250:intron
ACTTGGCGTCACACTTCACG+AGG 0.666144 4_2:-74606193 Msa0622250:CDS
GTAGACCATCCCAAAACACC+CGG 0.672266 4_2:+74599147 None:intergenic
TGTTCAAGATGTGAAAGCAG+AGG 0.675037 4_2:-74605258 Msa0622250:CDS
TACCTCCCACAAACTTCCAG+GGG 0.676489 4_2:+74606077 None:intergenic
ACTTGTGCAGCATTTACACA+AGG 0.677794 4_2:-74598806 Msa0622250:three_prime_UTR
GTTTCTGGCTATGACAGAGG+AGG 0.682217 4_2:-74605222 Msa0622250:intron
CATAGCCGTATGTTCTTGTG+TGG 0.682854 4_2:-74599495 Msa0622250:intron
AAATGGATTTGATAGCTGAG+AGG 0.682911 4_2:-74602111 Msa0622250:CDS
GTTGGAAGTGCTGTGCCCAG+TGG 0.683907 4_2:-74602043 Msa0622250:CDS
CCAACTAGGTGTCAAAGCTG+GGG 0.684172 4_2:-74605310 Msa0622250:intron
CCAAGCCTGATGGAAAACCA+TGG 0.686242 4_2:-74599111 Msa0622250:three_prime_UTR
TCAACCGGATGAATGATGAA+GGG 0.689425 4_2:+74605704 None:intergenic
GTAGCTCCAAACATAAAAGG+GGG 0.697648 4_2:-74600159 Msa0622250:three_prime_UTR
GGTTGCAACATGCTAAAACA+CGG 0.702738 4_2:-74600440 Msa0622250:CDS
AATGTATGCAATTCTTGGAG+AGG 0.707152 4_2:-74606920 Msa0622250:CDS
TTGGCATTTAAAGCTCACGA+TGG 0.719107 4_2:-74605749 Msa0622250:CDS
CTTGGCGTCACACTTCACGA+GGG 0.722443 4_2:-74606192 Msa0622250:CDS
ATGGATTTGATAGCTGAGAG+GGG 0.725531 4_2:-74602109 Msa0622250:CDS
TGTATGCAATTCTTGGAGAG+GGG 0.729175 4_2:-74606918 Msa0622250:CDS
GATGGTCAGAAAAGACGCAG+CGG 0.742743 4_2:-74605731 Msa0622250:CDS
AAGCCCATAAAATTGCCTCG+TGG 0.756087 4_2:-74599901 Msa0622250:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TACAATATATTTTTTTGTAT+AGG - chr4_2:74599496-74599515 Msa0622250:three_prime_UTR 10.0%
!!! TACAATATATTTTTTTGTAT+AGG - chr4_2:74599496-74599515 Msa0622250:three_prime_UTR 10.0%
!!! ATCCTATTATTATTAATTTT+AGG + chr4_2:74601518-74601537 None:intergenic 10.0%
!! TTTGATATATAATCAAAATA+TGG - chr4_2:74601948-74601967 Msa0622250:intron 10.0%
!! TCTAAATAATATAAAAATAG+AGG - chr4_2:74601988-74602007 Msa0622250:CDS 10.0%
!! TTTGAACAAAAAAAAAATAT+AGG + chr4_2:74602806-74602825 None:intergenic 10.0%
!! AAATAAATAATAAATAGAAG+AGG + chr4_2:74603967-74603986 None:intergenic 10.0%
!! AAAAATACTTTCATAATATT+CGG + chr4_2:74605296-74605315 None:intergenic 10.0%
!!! TTTACATAAATTTTCATAAA+TGG - chr4_2:74605540-74605559 Msa0622250:CDS 10.0%
!!! TATATATAACAAACTTTTTT+TGG + chr4_2:74605796-74605815 None:intergenic 10.0%
!! GAAAAAAATATTGAAACAAT+TGG + chr4_2:74598923-74598942 None:intergenic 15.0%
!! AAAAACTTACAAAATTAAAC+TGG + chr4_2:74599358-74599377 None:intergenic 15.0%
!!! TATATTTTTTTGTATAGGAT+AGG - chr4_2:74599501-74599520 Msa0622250:three_prime_UTR 15.0%
!!! TATTGTCATTGTTATTAATT+AGG - chr4_2:74599831-74599850 Msa0622250:intron 15.0%
!! TCATTAATAAATTACAATCA+AGG + chr4_2:74600711-74600730 None:intergenic 15.0%
!! AATTTCAAAATTTAATACAC+CGG + chr4_2:74600983-74601002 None:intergenic 15.0%
!! TGCCTAAAATTAATAATAAT+AGG - chr4_2:74601513-74601532 Msa0622250:CDS 15.0%
!! AATAGGATATTATTGTATAT+AGG - chr4_2:74601530-74601549 Msa0622250:CDS 15.0%
!!! ATATATGAATCATAGTTTTA+AGG + chr4_2:74602129-74602148 None:intergenic 15.0%
!!! CTATTTAGAATACATAATAT+TGG - chr4_2:74603637-74603656 Msa0622250:intron 15.0%
!! TTCTTAATCTACATAAAATA+CGG + chr4_2:74604565-74604584 None:intergenic 15.0%
!! TAATTAAAATGTGAAAAAGT+GGG + chr4_2:74604993-74605012 None:intergenic 15.0%
!!! TTGTGTTTATTTTCTTTATT+AGG - chr4_2:74605434-74605453 Msa0622250:intron 15.0%
!! ATTTATGTAAATAATAAAGC+TGG + chr4_2:74605531-74605550 None:intergenic 15.0%
!! ACTCTCATAATTATAATAAT+AGG - chr4_2:74606381-74606400 Msa0622250:intron 15.0%
!!! ACATTTATATGTCTAAATTT+TGG - chr4_2:74607142-74607161 Msa0622250:intron 15.0%
!! TATGTATATAAAAGAAGAAA+TGG + chr4_2:74607467-74607486 None:intergenic 15.0%
!!! AATTTTAGTTTATTGAAATG+CGG - chr4_2:74607486-74607505 Msa0622250:five_prime_UTR 15.0%
!!! TTTTTTTTTTGCAGTTTCTT+TGG - chr4_2:74599166-74599185 Msa0622250:three_prime_UTR 20.0%
!! TTCAACAAAAAATATTGATG+AGG + chr4_2:74599314-74599333 None:intergenic 20.0%
!!! CATCAATATTTTTTGTTGAA+TGG - chr4_2:74599314-74599333 Msa0622250:three_prime_UTR 20.0%
!! TCAATATCAATATTGCAAAT+TGG - chr4_2:74599854-74599873 Msa0622250:three_prime_UTR 20.0%
!! CAATCTTAATATACTTGTTT+CGG - chr4_2:74600273-74600292 Msa0622250:three_prime_UTR 20.0%
!! AAAACAGAAACAAAACAAAA+AGG + chr4_2:74600331-74600350 None:intergenic 20.0%
!! AATGTATAAGCAAATGAATA+TGG + chr4_2:74600764-74600783 None:intergenic 20.0%
!! ATTTCAAAATTTAATACACC+GGG + chr4_2:74600982-74601001 None:intergenic 20.0%
!!! GGTGTATTAAATTTTGAAAT+TGG - chr4_2:74600982-74601001 Msa0622250:intron 20.0%
!!! TATTAAATTTTGAAATTGGC+TGG - chr4_2:74600986-74601005 Msa0622250:intron 20.0%
!!! ATTAAATTTTGAAATTGGCT+GGG - chr4_2:74600987-74601006 Msa0622250:intron 20.0%
!!! ATTTTGCCTTAACTTTAATA+GGG + chr4_2:74601194-74601213 None:intergenic 20.0%
!!! AATTTTGCCTTAACTTTAAT+AGG + chr4_2:74601195-74601214 None:intergenic 20.0%
!!! ATTTTCAAGATTCAAATCTA+TGG - chr4_2:74601308-74601327 Msa0622250:CDS 20.0%
!!! GTTATCTGAAATTAAGTTAA+GGG - chr4_2:74601474-74601493 Msa0622250:intron 20.0%
!! CTTAAATTGCTATAATTAGT+TGG + chr4_2:74601680-74601699 None:intergenic 20.0%
!!! TAATTTTACAGTTTGAATCA+AGG - chr4_2:74601755-74601774 Msa0622250:CDS 20.0%
!! GATATATAATCAAAATATGG+AGG - chr4_2:74601951-74601970 Msa0622250:intron 20.0%
!! TATGATTCATATATCCATTT+AGG - chr4_2:74602135-74602154 Msa0622250:intron 20.0%
!!! ATTAAGTTGGAAAACAATTT+AGG + chr4_2:74602375-74602394 None:intergenic 20.0%
!!! AAAAAGTATAATAATGAAGC+AGG + chr4_2:74602650-74602669 None:intergenic 20.0%
!! AACAAAAAAAAAATATAGGC+CGG + chr4_2:74602802-74602821 None:intergenic 20.0%
!!! ATATTCGATTTACTTTTTGT+AGG - chr4_2:74603715-74603734 Msa0622250:intron 20.0%
!! CATCATTAAAATAGACTAAT+AGG + chr4_2:74604218-74604237 None:intergenic 20.0%
!! TGTAATATTATTGACACATT+AGG - chr4_2:74604740-74604759 Msa0622250:intron 20.0%
!! GTAATTAAAATGTGAAAAAG+TGG + chr4_2:74604994-74605013 None:intergenic 20.0%
!! GAGAGAGATATAAAATTAAT+AGG + chr4_2:74605024-74605043 None:intergenic 20.0%
!! AGGAAAATAGGTAATTAAAA+AGG - chr4_2:74605056-74605075 Msa0622250:CDS 20.0%
!! GGAAAATAGGTAATTAAAAA+GGG - chr4_2:74605057-74605076 Msa0622250:CDS 20.0%
!! GAAAATAGGTAATTAAAAAG+GGG - chr4_2:74605058-74605077 Msa0622250:CDS 20.0%
!! AAAATAGGTAATTAAAAAGG+GGG - chr4_2:74605059-74605078 Msa0622250:CDS 20.0%
!! ATCAGTTATTCATATCATTA+AGG - chr4_2:74605383-74605402 Msa0622250:intron 20.0%
!! AGTAAATATTATGCTAGTAT+AGG - chr4_2:74605496-74605515 Msa0622250:CDS 20.0%
!! GTAAATATTATGCTAGTATA+GGG - chr4_2:74605497-74605516 Msa0622250:CDS 20.0%
!!! ATATTTTTTGTAGTTTCTGA+AGG - chr4_2:74605830-74605849 Msa0622250:intron 20.0%
!!! ATTGTTAACTTGAATCATAT+TGG + chr4_2:74606156-74606175 None:intergenic 20.0%
!!! AAACATATATTTTACTAGCA+TGG + chr4_2:74606317-74606336 None:intergenic 20.0%
!! AACTTGTAAACAATTATTTC+AGG - chr4_2:74606560-74606579 Msa0622250:intron 20.0%
!!! ATTTTACTGTACTCAAATAT+AGG - chr4_2:74606671-74606690 Msa0622250:intron 20.0%
!! TGAAGGAAATTTAGAAAATT+TGG - chr4_2:74606814-74606833 Msa0622250:CDS 20.0%
!!! GAACTTTTTACAAGTAAAAA+AGG + chr4_2:74607445-74607464 None:intergenic 20.0%
! ATTTGATACGCAACATTAAT+CGG - chr4_2:74599013-74599032 Msa0622250:three_prime_UTR 25.0%
! TTCGTCTTAATACAAACATA+AGG + chr4_2:74599766-74599785 None:intergenic 25.0%
! GTATTAAGACGAATTTGATT+AGG - chr4_2:74599773-74599792 Msa0622250:intron 25.0%
!! TTGATTATAGTTCTGCAAAT+GGG - chr4_2:74600107-74600126 Msa0622250:three_prime_UTR 25.0%
! TTATATCATCTAATTGCATC+AGG - chr4_2:74600162-74600181 Msa0622250:three_prime_UTR 25.0%
! ATGAAACGTAATTTAATCGT+TGG - chr4_2:74600727-74600746 Msa0622250:intron 25.0%
!! AAGCAACTTTTACATAAAAG+AGG + chr4_2:74600924-74600943 None:intergenic 25.0%
! GTTACCTGAAATTAAGTTAA+GGG + chr4_2:74601228-74601247 None:intergenic 25.0%
! GTGACATGAAAAAAAGATAA+AGG + chr4_2:74601259-74601278 None:intergenic 25.0%
! CCATATGCAAATTGATAAAA+AGG + chr4_2:74601288-74601307 None:intergenic 25.0%
!! CCTTTTTATCAATTTGCATA+TGG - chr4_2:74601285-74601304 Msa0622250:CDS 25.0%
! ATGACGTGAAAAAAAGATAA+AGG - chr4_2:74601443-74601462 Msa0622250:intron 25.0%
!! CGTTATCTGAAATTAAGTTA+AGG - chr4_2:74601473-74601492 Msa0622250:intron 25.0%
! ACTTGATTAATAAAATGCAG+TGG - chr4_2:74601723-74601742 Msa0622250:CDS 25.0%
!!! AATAAAAGAGTATCTCTCAA+TGG + chr4_2:74601797-74601816 None:intergenic 25.0%
!!! TGAGAGATACTCTTTTATTT+AGG - chr4_2:74601798-74601817 Msa0622250:CDS 25.0%
! CATTGAAGATTAATAACAAG+TGG + chr4_2:74602161-74602180 None:intergenic 25.0%
!!! CACTTGTTATTAATCTTCAA+TGG - chr4_2:74602159-74602178 Msa0622250:intron 25.0%
! CTTCATGATATAAATACCAA+AGG + chr4_2:74602281-74602300 None:intergenic 25.0%
! CTGTACACAATATATTAAGT+TGG + chr4_2:74602388-74602407 None:intergenic 25.0%
! TAATAACTGAACATATAGAG+AGG + chr4_2:74602862-74602881 None:intergenic 25.0%
!!! CAGTTATTAAACCTTTTTTC+CGG - chr4_2:74602873-74602892 Msa0622250:CDS 25.0%
!!! AGTTATTAAACCTTTTTTCC+GGG - chr4_2:74602874-74602893 Msa0622250:CDS 25.0%
! AATAAACAAAATGGTTGCAT+TGG + chr4_2:74603077-74603096 None:intergenic 25.0%
! GAACATGTGAATAAACAAAA+TGG + chr4_2:74603086-74603105 None:intergenic 25.0%
!!! TACTTTATTTTGGACTTTTG+AGG - chr4_2:74603158-74603177 Msa0622250:CDS 25.0%
! GAAAAATCATATGTCACTAT+GGG + chr4_2:74603473-74603492 None:intergenic 25.0%
! AGAAAAATCATATGTCACTA+TGG + chr4_2:74603474-74603493 None:intergenic 25.0%
! AACAAAATACATACAGATCT+AGG + chr4_2:74603610-74603629 None:intergenic 25.0%
! AACATACTCTCATACAAAAA+TGG + chr4_2:74603803-74603822 None:intergenic 25.0%
! AAATACAGGTAGTCTTTATT+TGG - chr4_2:74603831-74603850 Msa0622250:intron 25.0%
!!! ATTTTGAGATGAACTTCATT+TGG + chr4_2:74603925-74603944 None:intergenic 25.0%
!! TTTTAATGATGTTACACTGT+TGG - chr4_2:74604227-74604246 Msa0622250:intron 25.0%
!! AGCATCAAGATCTTAATTTT+TGG + chr4_2:74604266-74604285 None:intergenic 25.0%
! CTTAATTATCTAACGCAATT+TGG + chr4_2:74604488-74604507 None:intergenic 25.0%
! TTAATCTACATAAAATACGG+TGG + chr4_2:74604562-74604581 None:intergenic 25.0%
! TATATGATACACACTGAAAT+TGG - chr4_2:74604619-74604638 Msa0622250:intron 25.0%
! TTGCTACTAAATAGGAAAAT+AGG - chr4_2:74605044-74605063 Msa0622250:CDS 25.0%
!! TTTATTTCTTATCATGTGCA+AGG - chr4_2:74605102-74605121 Msa0622250:intron 25.0%
!! AAACACAAATCTAATTTGCA+AGG - chr4_2:74605140-74605159 Msa0622250:intron 25.0%
!! ATCTGAAACTTAATAACAGT+AGG + chr4_2:74605197-74605216 None:intergenic 25.0%
!!! TAGAAGTCTTATTTTGTTAG+TGG - chr4_2:74605460-74605479 Msa0622250:CDS 25.0%
! TATCATGTTAGTATATCCAA+CGG - chr4_2:74606414-74606433 Msa0622250:intron 25.0%
! ATTCCATCTAGTAATTAAAC+TGG - chr4_2:74606504-74606523 Msa0622250:intron 25.0%
! TAACCAGTTTAATTACTAGA+TGG + chr4_2:74606510-74606529 None:intergenic 25.0%
! AGTAGATTATTTCACTATCT+TGG - chr4_2:74606532-74606551 Msa0622250:intron 25.0%
! TTGAGTACAGTAAAATTTCT+GGG + chr4_2:74606667-74606686 None:intergenic 25.0%
! TTTGAGTACAGTAAAATTTC+TGG + chr4_2:74606668-74606687 None:intergenic 25.0%
!! ATCCACGTACTAATTTATTT+TGG - chr4_2:74606711-74606730 Msa0622250:intron 25.0%
!!! GTTATGTTATTTCAAGTTGA+AGG - chr4_2:74606797-74606816 Msa0622250:CDS 25.0%
!! ACACAAATTATTTGTTTCTC+AGG - chr4_2:74606918-74606937 Msa0622250:CDS 25.0%
! TGTATATAGAAAAGAGTGAT+AGG - chr4_2:74607264-74607283 Msa0622250:five_prime_UTR 25.0%
!! GTTTGTTATCTGTCTTTCTT+TGG - chr4_2:74598666-74598685 Msa0622250:three_prime_UTR 30.0%
ATTCCATGAATGATAGGTTA+TGG + chr4_2:74598821-74598840 None:intergenic 30.0%
GATTGAATTCCATGAATGAT+AGG + chr4_2:74598827-74598846 None:intergenic 30.0%
! TTTTTGTTGAATGGTCGAAA+TGG - chr4_2:74599323-74599342 Msa0622250:three_prime_UTR 30.0%
ACTAACTAACATCGTGAAAT+AGG + chr4_2:74599408-74599427 None:intergenic 30.0%
TATTAGAGAAGCTGAAAAGT+TGG - chr4_2:74599460-74599479 Msa0622250:intron 30.0%
ATTAGAGAAGCTGAAAAGTT+GGG - chr4_2:74599461-74599480 Msa0622250:intron 30.0%
!!! TAGTGTTTAGACTAGTTTTC+AGG - chr4_2:74599535-74599554 Msa0622250:three_prime_UTR 30.0%
!!! AGTGTTTAGACTAGTTTTCA+GGG - chr4_2:74599536-74599555 Msa0622250:three_prime_UTR 30.0%
! TTTTCAGCTTCTCTAATAGT+AGG + chr4_2:74599458-74599477 None:intergenic 30.0%
TATTAGAGAAGCTGAAAAGT+TGG - chr4_2:74599460-74599479 Msa0622250:intron 30.0%
ATTAGAGAAGCTGAAAAGTT+GGG - chr4_2:74599461-74599480 Msa0622250:intron 30.0%
!!! TAGTGTTTAGACTAGTTTTC+AGG - chr4_2:74599535-74599554 Msa0622250:three_prime_UTR 30.0%
!!! AGTGTTTAGACTAGTTTTCA+GGG - chr4_2:74599536-74599555 Msa0622250:three_prime_UTR 30.0%
TATCAATATTGCAAATTGGC+AGG - chr4_2:74599858-74599877 Msa0622250:three_prime_UTR 30.0%
! TGTGAAGCTTTTAGTATAGT+AGG - chr4_2:74599883-74599902 Msa0622250:three_prime_UTR 30.0%
! GTTGATTATAGTTCTGCAAA+TGG - chr4_2:74600106-74600125 Msa0622250:three_prime_UTR 30.0%
! TGATTATAGTTCTGCAAATG+GGG - chr4_2:74600108-74600127 Msa0622250:three_prime_UTR 30.0%
! GTTAGTCCATAATGCTTTTA+CGG - chr4_2:74600228-74600247 Msa0622250:three_prime_UTR 30.0%
ATATTAAGATTGCTTTCACG+AGG + chr4_2:74600265-74600284 None:intergenic 30.0%
!!! TTTTGTTTCTGTTTTGTTCC+TGG - chr4_2:74600336-74600355 Msa0622250:intron 30.0%
!! TATCGACAATTTTTCAGAAG+AGG + chr4_2:74600485-74600504 None:intergenic 30.0%
!! AATTTAATCGTTGGTAGCTT+TGG - chr4_2:74600736-74600755 Msa0622250:intron 30.0%
AAAAATTACTTGTCTCTTCC+CGG - chr4_2:74600961-74600980 Msa0622250:intron 30.0%
ATGGAAATTACCTGTTTATG+TGG + chr4_2:74601103-74601122 None:intergenic 30.0%
CAGTAGGTTATTCAAATCAA+TGG + chr4_2:74601122-74601141 None:intergenic 30.0%
!! CATTGATTTGAATAACCTAC+TGG - chr4_2:74601120-74601139 Msa0622250:intron 30.0%
! ACTCTTCATCATTCTTTTTG+AGG - chr4_2:74601145-74601164 Msa0622250:intron 30.0%
! CCTCATCTAAATTTTCACTT+AGG + chr4_2:74601171-74601190 None:intergenic 30.0%
CCTAAGTGAAAATTTAGATG+AGG - chr4_2:74601168-74601187 Msa0622250:intron 30.0%
TCATCCCTTAACTTAATTTC+AGG - chr4_2:74601221-74601240 Msa0622250:intron 30.0%
CGTTACCTGAAATTAAGTTA+AGG + chr4_2:74601229-74601248 None:intergenic 30.0%
TCATATGAAAACATGAGTGA+AGG + chr4_2:74601370-74601389 None:intergenic 30.0%
CTTGAAAATCCATATGCAAA+CGG - chr4_2:74601405-74601424 Msa0622250:intron 30.0%
CAAATAAGTGATTAGTGTGT+GGG - chr4_2:74601922-74601941 Msa0622250:intron 30.0%
ATATGGAGGACTAAATTTAG+AGG - chr4_2:74601965-74601984 Msa0622250:intron 30.0%
TTAATAACAAGTGGCCTAAA+TGG + chr4_2:74602152-74602171 None:intergenic 30.0%
ATTGCGTTCTGTTATTATCA+CGG - chr4_2:74602212-74602231 Msa0622250:intron 30.0%
GGATGTATCAAATTAAGGTA+TGG - chr4_2:74602463-74602482 Msa0622250:intron 30.0%
GTATATTTACATAGTTGCCA+AGG - chr4_2:74602485-74602504 Msa0622250:intron 30.0%
! TGAGTTCTAGTCTATTTATG+TGG + chr4_2:74602554-74602573 None:intergenic 30.0%
AAATCCTGAAGATTATGCAA+AGG - chr4_2:74602713-74602732 Msa0622250:CDS 30.0%
CTTTCTCATGTTCTTTGAAT+AGG + chr4_2:74602758-74602777 None:intergenic 30.0%
! ACATGAGAAAGATCTTTTAG+AGG - chr4_2:74602767-74602786 Msa0622250:intron 30.0%
GAAGATATAAGTTTAGTCAC+TGG + chr4_2:74602920-74602939 None:intergenic 30.0%
TATCTTCTCCATTTCTTGAT+AGG - chr4_2:74602933-74602952 Msa0622250:intron 30.0%
AGACCTTATGACAGTTAAAA+CGG - chr4_2:74602999-74603018 Msa0622250:intron 30.0%
GTTTATTCACATGTTCATGT+TGG - chr4_2:74603090-74603109 Msa0622250:CDS 30.0%
!! TACTCGTGCATACTTTATTT+TGG - chr4_2:74603148-74603167 Msa0622250:CDS 30.0%
TTGATATACCAAGTAAAAGG+TGG + chr4_2:74603506-74603525 None:intergenic 30.0%
CCTTTGATATACCAAGTAAA+AGG + chr4_2:74603509-74603528 None:intergenic 30.0%
! CCTTTTACTTGGTATATCAA+AGG - chr4_2:74603506-74603525 Msa0622250:intron 30.0%
AAACATGAAAAATGAGAGCA+AGG + chr4_2:74603532-74603551 None:intergenic 30.0%
TACATACAGATCTAGGAATA+GGG + chr4_2:74603603-74603622 None:intergenic 30.0%
ATACATACAGATCTAGGAAT+AGG + chr4_2:74603604-74603623 None:intergenic 30.0%
! CGAAACATATTTTCTTTGAC+TGG - chr4_2:74603667-74603686 Msa0622250:CDS 30.0%
!!! GATTTACTTTTTGTAGGTGA+AGG - chr4_2:74603721-74603740 Msa0622250:intron 30.0%
! TTTTGTACCCATTAGGTTTA+GGG + chr4_2:74603760-74603779 None:intergenic 30.0%
!! TTTTGTATGAGAGTATGTTC+AGG - chr4_2:74603804-74603823 Msa0622250:intron 30.0%
!! AACTTCATTTGGATTAGCTA+GGG + chr4_2:74603914-74603933 None:intergenic 30.0%
AAGAGGATGATAAACTCATT+AGG + chr4_2:74603950-74603969 None:intergenic 30.0%
GTAGATTAGAACAGAAGAAA+TGG - chr4_2:74603989-74604008 Msa0622250:intron 30.0%
!! AGACGGTATTATTTCTGATA+CGG + chr4_2:74604515-74604534 None:intergenic 30.0%
TAGATTAAGAATCTTCCTCA+AGG - chr4_2:74604574-74604593 Msa0622250:intron 30.0%
ATTCCATCAGTACAAAAATG+GGG + chr4_2:74604671-74604690 None:intergenic 30.0%
GATTCCATCAGTACAAAAAT+GGG + chr4_2:74604672-74604691 None:intergenic 30.0%
TGATTCCATCAGTACAAAAA+TGG + chr4_2:74604673-74604692 None:intergenic 30.0%
CTCCAAATAGAAAACATACT+GGG + chr4_2:74604867-74604886 None:intergenic 30.0%
ACTCCAAATAGAAAACATAC+TGG + chr4_2:74604868-74604887 None:intergenic 30.0%
!! ATGTTTTCTATTTGGAGTGA+TGG - chr4_2:74604870-74604889 Msa0622250:intron 30.0%
TAATAATCCATATGTGTGCA+AGG + chr4_2:74604966-74604985 None:intergenic 30.0%
TAATTAAAAAGGGGGAAAAG+TGG - chr4_2:74605067-74605086 Msa0622250:CDS 30.0%
AATTAAAAAGGGGGAAAAGT+GGG - chr4_2:74605068-74605087 Msa0622250:CDS 30.0%
! TAAGCGCACATCAAATATTT+TGG - chr4_2:74605225-74605244 Msa0622250:CDS 30.0%
! AAGCGCACATCAAATATTTT+GGG - chr4_2:74605226-74605245 Msa0622250:CDS 30.0%
!! AGCATCTTTAGAATGTATTG+TGG - chr4_2:74605359-74605378 Msa0622250:intron 30.0%
!!! TCTTATTTTGTTAGTGGCTT+AGG - chr4_2:74605466-74605485 Msa0622250:CDS 30.0%
ATATTCACCTTTCACTTCAT+TGG - chr4_2:74605589-74605608 Msa0622250:intron 30.0%
TCATAATTAACTTCGTTACC+AGG - chr4_2:74605615-74605634 Msa0622250:intron 30.0%
TGCAAGACACAAAATAATGA+AGG - chr4_2:74605702-74605721 Msa0622250:CDS 30.0%
AGACACAAAATAATGAAGGT+AGG - chr4_2:74605706-74605725 Msa0622250:CDS 30.0%
GAATCTGAAAAACTGTCAAA+TGG - chr4_2:74605930-74605949 Msa0622250:CDS 30.0%
! TATTTTCCCCCTTTTATGTT+TGG + chr4_2:74605967-74605986 None:intergenic 30.0%
AGGGGGAAAATATTATTGAA+CGG - chr4_2:74605975-74605994 Msa0622250:intron 30.0%
GAAAATATTATTGAACGGTG+TGG - chr4_2:74605980-74605999 Msa0622250:intron 30.0%
GTGCATCATGTAAATTTGAA+GGG - chr4_2:74606095-74606114 Msa0622250:CDS 30.0%
ATGTAAATTTGAAGGGCAAA+GGG - chr4_2:74606102-74606121 Msa0622250:CDS 30.0%
! AATATATGTTTTGCACCATG+TGG - chr4_2:74606326-74606345 Msa0622250:intron 30.0%
ATCATGTTAGTATATCCAAC+GGG - chr4_2:74606415-74606434 Msa0622250:intron 30.0%
AACAATTATTTCAGGCATGA+TGG - chr4_2:74606568-74606587 Msa0622250:intron 30.0%
TGAGTACAGTAAAATTTCTG+GGG + chr4_2:74606666-74606685 None:intergenic 30.0%
CAAATATAGGATGATGTCTT+TGG - chr4_2:74606684-74606703 Msa0622250:intron 30.0%
TGCCAAAATAAATTAGTACG+TGG + chr4_2:74606716-74606735 None:intergenic 30.0%
ATTAAGAATCAAGCATAACC+AGG + chr4_2:74606858-74606877 None:intergenic 30.0%
TGTTTCATTGAATGTGTTCA+TGG - chr4_2:74606888-74606907 Msa0622250:CDS 30.0%
TTCTTGAATGCTAGATGATT+TGG - chr4_2:74607031-74607050 Msa0622250:intron 30.0%
!!! GTTTTGAGTTTCTGAAACTT+TGG + chr4_2:74607235-74607254 None:intergenic 30.0%
TTTCAGAAACTCAAAACTGA+AGG - chr4_2:74607238-74607257 Msa0622250:CDS 30.0%
AGAAAAGAGTGATAGGATAA+AGG - chr4_2:74607271-74607290 Msa0622250:five_prime_UTR 30.0%
! ATAAAGTGCTTGGTATAATG+AGG - chr4_2:74607381-74607400 Msa0622250:five_prime_UTR 30.0%
TTTATTGAAATGCGGATTCT+GGG - chr4_2:74607494-74607513 Msa0622250:five_prime_UTR 30.0%
AATCGAGAAGATGGTTATTG+CGG + chr4_2:74598769-74598788 None:intergenic 35.0%
! TCCTCTGTTTCTCTCAATTA+TGG - chr4_2:74598858-74598877 Msa0622250:three_prime_UTR 35.0%
!! GTTTTAGTACCTGACATGAA+AGG + chr4_2:74598892-74598911 None:intergenic 35.0%
GCGAAAATGTTACTAGTGTT+TGG - chr4_2:74599115-74599134 Msa0622250:three_prime_UTR 35.0%
GTGTGAATGTATGCAATTCT+TGG - chr4_2:74599192-74599211 Msa0622250:intron 35.0%
AATGTATGCAATTCTTGGAG+AGG - chr4_2:74599197-74599216 Msa0622250:intron 35.0%
ATGTATGCAATTCTTGGAGA+GGG - chr4_2:74599198-74599217 Msa0622250:intron 35.0%
! GTAAGTTTTTGTAGTTCCCT+TGG - chr4_2:74599368-74599387 Msa0622250:intron 35.0%
CTTCTCTAATAGTAGGTCAA+GGG + chr4_2:74599568-74599587 None:intergenic 35.0%
! AGTTCTAACCAATAGGTCAA+GGG + chr4_2:74599680-74599699 None:intergenic 35.0%
! AAGTTCTAACCAATAGGTCA+AGG + chr4_2:74599681-74599700 None:intergenic 35.0%
CTAGATTTGCATCTAGAGAA+TGG - chr4_2:74599968-74599987 Msa0622250:three_prime_UTR 35.0%
!!! TTGTTCTTCGGTTTTTTCCT+CGG - chr4_2:74599999-74600018 Msa0622250:three_prime_UTR 35.0%
!! AGCTTACCGTAAAAGCATTA+TGG + chr4_2:74600237-74600256 None:intergenic 35.0%
! ATAATGCTTTTACGGTAAGC+TGG - chr4_2:74600236-74600255 Msa0622250:three_prime_UTR 35.0%
ATTTGTCCAGGAACTTGATT+GGG - chr4_2:74600554-74600573 Msa0622250:intron 35.0%
TTACATTATCGATCCCAACT+AGG - chr4_2:74600793-74600812 Msa0622250:intron 35.0%
ACTAAAGAATTTGTCACTGC+AGG - chr4_2:74601012-74601031 Msa0622250:intron 35.0%
TTATCGTCAAATTAGCAGAC+AGG - chr4_2:74601044-74601063 Msa0622250:intron 35.0%
GAAATTACCTGTTTATGTGG+AGG + chr4_2:74601100-74601119 None:intergenic 35.0%
ATGAGGCCCTATTAAAGTTA+AGG - chr4_2:74601185-74601204 Msa0622250:intron 35.0%
!!! TCACGTCATTTTTGTCCTTT+TGG + chr4_2:74601432-74601451 None:intergenic 35.0%
! CTCACTTTGCTCTTTTTGTA+AGG + chr4_2:74601835-74601854 None:intergenic 35.0%
AAGAGCAAAGTGAGATATGT+TGG - chr4_2:74601841-74601860 Msa0622250:intron 35.0%
TGTTACTAAGTTCTTCGTCA+CGG + chr4_2:74601875-74601894 None:intergenic 35.0%
CCACACACTAATCACTTATT+TGG + chr4_2:74601924-74601943 None:intergenic 35.0%
CCAAATAAGTGATTAGTGTG+TGG - chr4_2:74601921-74601940 Msa0622250:intron 35.0%
TTGCGTTCTGTTATTATCAC+GGG - chr4_2:74602213-74602232 Msa0622250:intron 35.0%
AAAGGCTCATTCAGTACTTT+CGG + chr4_2:74602263-74602282 None:intergenic 35.0%
TGGAAAACAATTTAGGAGCT+AGG + chr4_2:74602368-74602387 None:intergenic 35.0%
TGTACAGAATAGCATTGCAA+TGG - chr4_2:74602401-74602420 Msa0622250:intron 35.0%
ATTACAGGTATTTGCTCCTT+TGG - chr4_2:74602428-74602447 Msa0622250:intron 35.0%
GCTTGGGATGTATCAAATTA+AGG - chr4_2:74602458-74602477 Msa0622250:intron 35.0%
!! AGTCTATTTATGTGGACTAG+TGG + chr4_2:74602546-74602565 None:intergenic 35.0%
ACTTGTATTTCATGACACGA+AGG - chr4_2:74602610-74602629 Msa0622250:intron 35.0%
TTCACCTTTGCATAATCTTC+AGG + chr4_2:74602720-74602739 None:intergenic 35.0%
CTCATGTTCTTTGAATAGGT+CGG + chr4_2:74602754-74602773 None:intergenic 35.0%
!! AGATCTTTTAGAGGTAGTAC+TGG - chr4_2:74602776-74602795 Msa0622250:intron 35.0%
TTTGTTCGCCTATCAAGAAA+TGG + chr4_2:74602944-74602963 None:intergenic 35.0%
GGTCTAAGAATTGATCATCT+TGG + chr4_2:74602984-74603003 None:intergenic 35.0%
!!! CTTCCGTTTTAACTGTCATA+AGG + chr4_2:74603005-74603024 None:intergenic 35.0%
TGAGATTAACCAAATTGCAC+AGG - chr4_2:74603273-74603292 Msa0622250:intron 35.0%
! GCTTTGATTTCTACGTTGAA+AGG - chr4_2:74603299-74603318 Msa0622250:intron 35.0%
!! CAGATTTGCTATCATGTTCT+GGG - chr4_2:74603556-74603575 Msa0622250:intron 35.0%
!! AGATTTGCTATCATGTTCTG+GGG - chr4_2:74603557-74603576 Msa0622250:intron 35.0%
ACATACAGATCTAGGAATAG+GGG + chr4_2:74603602-74603621 None:intergenic 35.0%
TTTGTACCCATTAGGTTTAG+GGG + chr4_2:74603759-74603778 None:intergenic 35.0%
! CTTTTGTACCCATTAGGTTT+AGG + chr4_2:74603761-74603780 None:intergenic 35.0%
! TGAAGACTTTTGTACCCATT+AGG + chr4_2:74603767-74603786 None:intergenic 35.0%
TATGTTCAGGCTTGAAATAC+AGG - chr4_2:74603817-74603836 Msa0622250:intron 35.0%
! TCCACATTCCATTTTCTTCA+AGG - chr4_2:74603874-74603893 Msa0622250:intron 35.0%
! CCACATTCCATTTTCTTCAA+GGG - chr4_2:74603875-74603894 Msa0622250:intron 35.0%
! CACATTCCATTTTCTTCAAG+GGG - chr4_2:74603876-74603895 Msa0622250:intron 35.0%
!! GAACTTCATTTGGATTAGCT+AGG + chr4_2:74603915-74603934 None:intergenic 35.0%
! AAATGGATTTGATAGCTGAG+AGG - chr4_2:74604006-74604025 Msa0622250:intron 35.0%
! AATGGATTTGATAGCTGAGA+GGG - chr4_2:74604007-74604026 Msa0622250:intron 35.0%
ACTGTTACAAGAGATCTTCT+GGG - chr4_2:74604384-74604403 Msa0622250:intron 35.0%
GGATTATGTCATATACTACG+TGG - chr4_2:74604449-74604468 Msa0622250:intron 35.0%
TATCTAACGCAATTTGGATG+AGG + chr4_2:74604482-74604501 None:intergenic 35.0%
!! GACGGTATTATTTCTGATAC+GGG + chr4_2:74604514-74604533 None:intergenic 35.0%
!! TATCCCCATTTTTGTACTGA+TGG - chr4_2:74604665-74604684 Msa0622250:intron 35.0%
TGACACATTAGGTTTAATGC+AGG - chr4_2:74604751-74604770 Msa0622250:intron 35.0%
TTAGGTTTAATGCAGGTCAA+CGG - chr4_2:74604758-74604777 Msa0622250:intron 35.0%
AATAGAAAACATACTGGGTG+AGG + chr4_2:74604862-74604881 None:intergenic 35.0%
! CACCCAGTATGTTTTCTATT+TGG - chr4_2:74604862-74604881 Msa0622250:intron 35.0%
TCTCTCTCTTGCTACTAAAT+AGG - chr4_2:74605036-74605055 Msa0622250:CDS 35.0%
ATCATTAAGGAAGCAATCGT+AGG - chr4_2:74605396-74605415 Msa0622250:intron 35.0%
! CTAGCAAATCAGCTTTTCAA+AGG - chr4_2:74605644-74605663 Msa0622250:intron 35.0%
AACATAAACTTCGTCTGAGT+TGG + chr4_2:74605760-74605779 None:intergenic 35.0%
CAGTAGCTCCAAACATAAAA+GGG - chr4_2:74605956-74605975 Msa0622250:intron 35.0%
AGTAGCTCCAAACATAAAAG+GGG - chr4_2:74605957-74605976 Msa0622250:intron 35.0%
! TTGTGTTTTCCATTGACCTT+GGG + chr4_2:74606068-74606087 None:intergenic 35.0%
! ATTGTGTTTTCCATTGACCT+TGG + chr4_2:74606069-74606088 None:intergenic 35.0%
CGTGCATCATGTAAATTTGA+AGG - chr4_2:74606094-74606113 Msa0622250:CDS 35.0%
CATGTAAATTTGAAGGGCAA+AGG - chr4_2:74606101-74606120 Msa0622250:CDS 35.0%
TGTAAATTTGAAGGGCAAAG+GGG - chr4_2:74606103-74606122 Msa0622250:CDS 35.0%
! GGCAGGACTTCTTTATATTT+TGG + chr4_2:74606179-74606198 None:intergenic 35.0%
AAATATAAAGAAGTCCTGCC+AGG - chr4_2:74606179-74606198 Msa0622250:CDS 35.0%
TACAACAGATAACCATTGGA+TGG + chr4_2:74606261-74606280 None:intergenic 35.0%
TGCATACAACAGATAACCAT+TGG + chr4_2:74606265-74606284 None:intergenic 35.0%
! TTTTACTAGCATGGATGATC+AGG + chr4_2:74606308-74606327 None:intergenic 35.0%
GAAGCCATCAAAAAGTTCAT+TGG + chr4_2:74606352-74606371 None:intergenic 35.0%
TAAGAGAGTGATTGAAGGAT+AGG - chr4_2:74606438-74606457 Msa0622250:intron 35.0%
! ATTTGACTTATCAAACGACC+AGG - chr4_2:74606745-74606764 Msa0622250:intron 35.0%
TACTGTATCATGTCTAATCC+TGG - chr4_2:74606837-74606856 Msa0622250:CDS 35.0%
!! CTCTAGAGTAGATCAAATAC+CGG - chr4_2:74606951-74606970 Msa0622250:intron 35.0%
! TCTAGAGTAGATCAAATACC+GGG - chr4_2:74606952-74606971 Msa0622250:intron 35.0%
CAGAACTGATCTGTAATCAT+TGG + chr4_2:74607094-74607113 None:intergenic 35.0%
CAATGATTACAGATCAGTTC+TGG - chr4_2:74607092-74607111 Msa0622250:intron 35.0%
TGCTTGGTATAATGAGGATA+GGG - chr4_2:74607387-74607406 Msa0622250:five_prime_UTR 35.0%
GTTTATTGAAATGCGGATTC+TGG - chr4_2:74607493-74607512 Msa0622250:five_prime_UTR 35.0%
ATGAGATATCCTGTTACGCT+CGG + chr4_2:74598630-74598649 None:intergenic 40.0%
GAAGATGGTTATTGCGGTTA+TGG + chr4_2:74598763-74598782 None:intergenic 40.0%
GAATCGGAAAATCGAGAAGA+TGG + chr4_2:74598778-74598797 None:intergenic 40.0%
GAAGGGGAAGAGAATTGAAT+CGG + chr4_2:74598794-74598813 None:intergenic 40.0%
TGATAGGTTATGGAGGAGAA+GGG + chr4_2:74598811-74598830 None:intergenic 40.0%
ATGATAGGTTATGGAGGAGA+AGG + chr4_2:74598812-74598831 None:intergenic 40.0%
CCATGAATGATAGGTTATGG+AGG + chr4_2:74598818-74598837 None:intergenic 40.0%
CCTCCATAACCTATCATTCA+TGG - chr4_2:74598815-74598834 Msa0622250:three_prime_UTR 40.0%
GCCATAATTGAGAGAAACAG+AGG + chr4_2:74598862-74598881 None:intergenic 40.0%
TGTATGCAATTCTTGGAGAG+GGG - chr4_2:74599199-74599218 Msa0622250:intron 40.0%
AAATCTCCTAGGGTTCTTAC+CGG - chr4_2:74599266-74599285 Msa0622250:intron 40.0%
GCTTCTCTAATAGTAGGTCA+AGG + chr4_2:74599569-74599588 None:intergenic 40.0%
! GGGTCTAAGTTCTAACCAAT+AGG + chr4_2:74599687-74599706 None:intergenic 40.0%
! AGACCCCCTTTAGATTTGTT+CGG - chr4_2:74599701-74599720 Msa0622250:intron 40.0%
TGTGCCGAACAAATCTAAAG+GGG + chr4_2:74599708-74599727 None:intergenic 40.0%
GTGTGCCGAACAAATCTAAA+GGG + chr4_2:74599709-74599728 None:intergenic 40.0%
! TCATATTCCGACAAAGCACT+TGG - chr4_2:74599907-74599926 Msa0622250:three_prime_UTR 40.0%
! ATGGCAGTTGTCTTGTTCTT+CGG - chr4_2:74599987-74600006 Msa0622250:three_prime_UTR 40.0%
TCTTGACCTTTACTGAACCT+TGG - chr4_2:74600066-74600085 Msa0622250:three_prime_UTR 40.0%
TCTAATTGCATCAGGACCTT+AGG - chr4_2:74600170-74600189 Msa0622250:three_prime_UTR 40.0%
GTATCTTCCTCCTAAAGAAC+TGG - chr4_2:74600204-74600223 Msa0622250:three_prime_UTR 40.0%
ACTAACTCCAGTTCTTTAGG+AGG + chr4_2:74600214-74600233 None:intergenic 40.0%
TGGACTAACTCCAGTTCTTT+AGG + chr4_2:74600217-74600236 None:intergenic 40.0%
TTGTTCCTGGTTGTTACAGT+TGG - chr4_2:74600349-74600368 Msa0622250:intron 40.0%
AAATGCCAACTGTAACAACC+AGG + chr4_2:74600357-74600376 None:intergenic 40.0%
! TTGGCATTTAAAGCTCACGA+TGG - chr4_2:74600368-74600387 Msa0622250:intron 40.0%
TCAACCGGATGAATGATGAA+GGG + chr4_2:74600416-74600435 None:intergenic 40.0%
CAATCAAGTTCCTGGACAAA+TGG + chr4_2:74600555-74600574 None:intergenic 40.0%
CATTTGTCCAGGAACTTGAT+TGG - chr4_2:74600553-74600572 Msa0622250:intron 40.0%
TGCTGGATTACTTCATGACA+CGG - chr4_2:74600587-74600606 Msa0622250:intron 40.0%
! CAGATGTTGTGACTTTTGAG+AGG - chr4_2:74600619-74600638 Msa0622250:intron 40.0%
!! TGTGACTTTTGAGAGGATAG+AGG - chr4_2:74600626-74600645 Msa0622250:intron 40.0%
TGTTCAAGATGTGAAAGCAG+AGG - chr4_2:74600859-74600878 Msa0622250:intron 40.0%
!! AATGTTTCTGGCTATGACAG+AGG - chr4_2:74600892-74600911 Msa0622250:intron 40.0%
ACATATGCCTCCACATAAAC+AGG - chr4_2:74601090-74601109 Msa0622250:intron 40.0%
AATGATGAAGAGTCACCAGT+AGG + chr4_2:74601138-74601157 None:intergenic 40.0%
AATAAAATGCAGTGGTGCGA+AGG - chr4_2:74601731-74601750 Msa0622250:CDS 40.0%
GTTACTAAGTTCTTCGTCAC+GGG + chr4_2:74601874-74601893 None:intergenic 40.0%
! CCAAGTGAAGCAAGAGTTTT+AGG + chr4_2:74602014-74602033 None:intergenic 40.0%
CCTAAAACTCTTGCTTCACT+TGG - chr4_2:74602011-74602030 Msa0622250:CDS 40.0%
!! GAAAGTACTGAATGAGCCTT+TGG - chr4_2:74602262-74602281 Msa0622250:intron 40.0%
!! CAATTGAGTTGAGTGTGTGA+CGG - chr4_2:74602341-74602360 Msa0622250:CDS 40.0%
!! AATTGAGTTGAGTGTGTGAC+GGG - chr4_2:74602342-74602361 Msa0622250:CDS 40.0%
CATTGCAATGGAGACATTAC+AGG - chr4_2:74602413-74602432 Msa0622250:intron 40.0%
TTACATAGTTGCCAAGGCTA+AGG - chr4_2:74602491-74602510 Msa0622250:intron 40.0%
TGACACGAAGGAAATTCTCT+TGG - chr4_2:74602622-74602641 Msa0622250:intron 40.0%
TACACAATCACCCGGAAAAA+AGG + chr4_2:74602887-74602906 None:intergenic 40.0%
TGCAATGATACACAATCACC+CGG + chr4_2:74602895-74602914 None:intergenic 40.0%
! GTTTCGTGGATTAACCTGTA+AGG + chr4_2:74603048-74603067 None:intergenic 40.0%
CAAAGCAAACCTGTGCAATT+TGG + chr4_2:74603285-74603304 None:intergenic 40.0%
CTACGTTGAAAGGCTTAATG+TGG - chr4_2:74603309-74603328 Msa0622250:intron 40.0%
CATATGTCACTATGGGTAAG+TGG + chr4_2:74603466-74603485 None:intergenic 40.0%
!! GCAGATTTGCTATCATGTTC+TGG - chr4_2:74603555-74603574 Msa0622250:intron 40.0%
ATTGCAACCCCTAAACCTAA+TGG - chr4_2:74603749-74603768 Msa0622250:intron 40.0%
TTGCAACCCCTAAACCTAAT+GGG - chr4_2:74603750-74603769 Msa0622250:intron 40.0%
CCCTTGAAGAAAATGGAATG+TGG + chr4_2:74603878-74603897 None:intergenic 40.0%
GTACAACCCCTTGAAGAAAA+TGG + chr4_2:74603885-74603904 None:intergenic 40.0%
! ATGGATTTGATAGCTGAGAG+GGG - chr4_2:74604008-74604027 Msa0622250:intron 40.0%
! TGATGTTACACTGTTGGTCT+TGG - chr4_2:74604233-74604252 Msa0622250:intron 40.0%
! CATGAGCCTTTTCTACAGAT+TGG - chr4_2:74604291-74604310 Msa0622250:intron 40.0%
CACTGTTACAAGAGATCTTC+TGG - chr4_2:74604383-74604402 Msa0622250:intron 40.0%
GTCTTTGTATTTACACCCAG+TGG - chr4_2:74604414-74604433 Msa0622250:intron 40.0%
TCAGAAATAATACCGTCTGC+AGG - chr4_2:74604517-74604536 Msa0622250:intron 40.0%
CACTGAAATTGGCAACAAGA+TGG - chr4_2:74604630-74604649 Msa0622250:intron 40.0%
! GTACTGATGGAATCAAGTGT+CGG - chr4_2:74604678-74604697 Msa0622250:intron 40.0%
ATGAGCTCCAATGAAGTGAA+AGG + chr4_2:74605599-74605618 None:intergenic 40.0%
!! CTTTTCAAAGGCATAAGCAG+TGG - chr4_2:74605656-74605675 Msa0622250:intron 40.0%
GGTTGCAACATGCTAAAACA+CGG - chr4_2:74605677-74605696 Msa0622250:intron 40.0%
TAATGAAGGTAGGTCATCTG+AGG - chr4_2:74605716-74605735 Msa0622250:CDS 40.0%
TTCTGTAGTGATATCAGCAG+CGG + chr4_2:74605871-74605890 None:intergenic 40.0%
GACTTTCTCAGTGATTCTGA+CGG - chr4_2:74605900-74605919 Msa0622250:CDS 40.0%
ACTTTCTCAGTGATTCTGAC+GGG - chr4_2:74605901-74605920 Msa0622250:CDS 40.0%
!! CCTTTTATGTTTGGAGCTAC+TGG + chr4_2:74605958-74605977 None:intergenic 40.0%
CCAGTAGCTCCAAACATAAA+AGG - chr4_2:74605955-74605974 Msa0622250:intron 40.0%
GTAGCTCCAAACATAAAAGG+GGG - chr4_2:74605958-74605977 Msa0622250:intron 40.0%
ACTGTCCTTCAGAGTAAGAA+TGG - chr4_2:74606029-74606048 Msa0622250:intron 40.0%
CACTTCCATTCTTACTCTGA+AGG + chr4_2:74606037-74606056 None:intergenic 40.0%
!! AGAGTAAGAATGGAAGTGCT+TGG - chr4_2:74606039-74606058 Msa0622250:intron 40.0%
CTTGAATCATATTGGCGACA+TGG + chr4_2:74606148-74606167 None:intergenic 40.0%
CAAAAAGTTCATTGGCCACA+TGG + chr4_2:74606344-74606363 None:intergenic 40.0%
! GTGGCCAATGAACTTTTTGA+TGG - chr4_2:74606345-74606364 Msa0622250:intron 40.0%
AGAGTGATTGAAGGATAGGA+TGG - chr4_2:74606442-74606461 Msa0622250:intron 40.0%
ACTCACCACACAAGAACATA+CGG + chr4_2:74606630-74606649 None:intergenic 40.0%
! CAGTAAAATTTCTGGGGACT+TGG + chr4_2:74606660-74606679 None:intergenic 40.0%
! AGATCAAATACCGGGTGTTT+TGG - chr4_2:74606960-74606979 Msa0622250:intron 40.0%
! GATCAAATACCGGGTGTTTT+GGG - chr4_2:74606961-74606980 Msa0622250:intron 40.0%
TATAAATGTCTGCGCTTCTG+CGG + chr4_2:74607131-74607150 None:intergenic 40.0%
AACTCACTAACCCAATAAGC+CGG - chr4_2:74607190-74607209 Msa0622250:intron 40.0%
ACTTGTGCAGCATTTACACA+AGG - chr4_2:74607311-74607330 Msa0622250:five_prime_UTR 40.0%
! ATTTACACAAGGAGCTTGCT+AGG - chr4_2:74607322-74607341 Msa0622250:five_prime_UTR 40.0%
CAAGCACTTTATCACACGTT+TGG + chr4_2:74607373-74607392 None:intergenic 40.0%
! CAAACGTGTGATAAAGTGCT+TGG - chr4_2:74607371-74607390 Msa0622250:five_prime_UTR 40.0%
GTGCTTGGTATAATGAGGAT+AGG - chr4_2:74607386-74607405 Msa0622250:five_prime_UTR 40.0%
GAAGAAGAAGAGAGTGAGAG+TGG + chr4_2:74598731-74598750 None:intergenic 45.0%
GATAGGTTATGGAGGAGAAG+GGG + chr4_2:74598810-74598829 None:intergenic 45.0%
ATGTGCGTCGAAATCTCCTA+GGG - chr4_2:74599256-74599275 Msa0622250:intron 45.0%
! TGTAGTTCCCTTGGCGTTTT+CGG - chr4_2:74599377-74599396 Msa0622250:intron 45.0%
GAGAAGCTGAAAAGTTGGGT+CGG - chr4_2:74599465-74599484 Msa0622250:intron 45.0%
GAGAAGCTGAAAAGTTGGGT+CGG - chr4_2:74599465-74599484 Msa0622250:intron 45.0%
GTGCCGAACAAATCTAAAGG+GGG + chr4_2:74599707-74599726 None:intergenic 45.0%
GGTGTGCCGAACAAATCTAA+AGG + chr4_2:74599710-74599729 None:intergenic 45.0%
! AGTTTTCCCCTGGAAGTTTG+TGG - chr4_2:74600034-74600053 Msa0622250:three_prime_UTR 45.0%
! GTTTTCCCCTGGAAGTTTGT+GGG - chr4_2:74600035-74600054 Msa0622250:three_prime_UTR 45.0%
CAACTGCCAAGGTTCAGTAA+AGG + chr4_2:74600075-74600094 None:intergenic 45.0%
CTTTACTGAACCTTGGCAGT+TGG - chr4_2:74600073-74600092 Msa0622250:three_prime_UTR 45.0%
AATACATGTGCCAACTGCCA+AGG + chr4_2:74600086-74600105 None:intergenic 45.0%
AGGAGGAAGATACGAGATCA+CGG + chr4_2:74600197-74600216 None:intergenic 45.0%
CGAACCCTTCATCATTCATC+CGG - chr4_2:74600409-74600428 Msa0622250:intron 45.0%
CTCAACCGGATGAATGATGA+AGG + chr4_2:74600417-74600436 None:intergenic 45.0%
CTTCATCATTCATCCGGTTG+AGG - chr4_2:74600415-74600434 Msa0622250:intron 45.0%
GAATGTCCAACCATTTGTCC+AGG - chr4_2:74600542-74600561 Msa0622250:intron 45.0%
CAAGTTCCTGGACAAATGGT+TGG + chr4_2:74600551-74600570 None:intergenic 45.0%
TTGACTCCCAATCAAGTTCC+TGG + chr4_2:74600563-74600582 None:intergenic 45.0%
!! GACTTTTGAGAGGATAGAGG+AGG - chr4_2:74600629-74600648 Msa0622250:intron 45.0%
GAGAGGATAGAGGAGGAATT+TGG - chr4_2:74600636-74600655 Msa0622250:intron 45.0%
CATTGTGGAAGGAGAGACTA+AGG - chr4_2:74600674-74600693 Msa0622250:intron 45.0%
ATGTGAAAGCAGAGGACCTT+CGG - chr4_2:74600867-74600886 Msa0622250:intron 45.0%
TAGCCAGAAACATTTGCCGA+AGG + chr4_2:74600886-74600905 None:intergenic 45.0%
! CCTTTTGGTCCGTTTGCATA+TGG + chr4_2:74601417-74601436 None:intergenic 45.0%
CCATATGCAAACGGACCAAA+AGG - chr4_2:74601414-74601433 Msa0622250:intron 45.0%
AACTCTTGCTTCACTTGGCT+TGG - chr4_2:74602016-74602035 Msa0622250:CDS 45.0%
ACTCTTGCTTCACTTGGCTT+GGG - chr4_2:74602017-74602036 Msa0622250:CDS 45.0%
CGTCACACACTCAACTCAAT+TGG + chr4_2:74602343-74602362 None:intergenic 45.0%
CTCCTTTGGCAAAGTTGCTT+GGG - chr4_2:74602442-74602461 Msa0622250:intron 45.0%
ATCCCAAGCAACTTTGCCAA+AGG + chr4_2:74602447-74602466 None:intergenic 45.0%
!! ATGTGGACTAGTGGCATTGT+AGG + chr4_2:74602537-74602556 None:intergenic 45.0%
!!! CTTTTAGAGGTAGTACTGGC+CGG - chr4_2:74602780-74602799 Msa0622250:intron 45.0%
CTGTGTGTAAAGAGCCTTAC+AGG - chr4_2:74603031-74603050 Msa0622250:intron 45.0%
ATTAAACCAAAGCCGTGCGT+TGG - chr4_2:74603408-74603427 Msa0622250:CDS 45.0%
TTAAACCAAAGCCGTGCGTT+GGG - chr4_2:74603409-74603428 Msa0622250:CDS 45.0%
! CACTTGCTCCACCTTTTACT+TGG - chr4_2:74603495-74603514 Msa0622250:intron 45.0%
!! TTTGGATTAGCTAGGGCAGT+AGG + chr4_2:74603907-74603926 None:intergenic 45.0%
GCATTGCAGCTCACTATAGT+GGG - chr4_2:74604030-74604049 Msa0622250:intron 45.0%
AGTGGGAGAGAATTCGTTAC+TGG - chr4_2:74604047-74604066 Msa0622250:intron 45.0%
! GAGAGAATTCGTTACTGGCT+TGG - chr4_2:74604052-74604071 Msa0622250:intron 45.0%
!! GAATTCGTTACTGGCTTGGT+TGG - chr4_2:74604056-74604075 Msa0622250:intron 45.0%
! AGCCTTTTCTACAGATTGGC+TGG - chr4_2:74604295-74604314 Msa0622250:intron 45.0%
AGCCAGCCAATCTGTAGAAA+AGG + chr4_2:74604300-74604319 None:intergenic 45.0%
GGCTCAATGCTATTAGAGAG+TGG - chr4_2:74604316-74604335 Msa0622250:intron 45.0%
GAGTGGCAAGAAGAGTTTGT+TGG - chr4_2:74604333-74604352 Msa0622250:intron 45.0%
TTGTTGGCAACATGAGCTCT+AGG - chr4_2:74604349-74604368 Msa0622250:intron 45.0%
TGTTGGCAACATGAGCTCTA+GGG - chr4_2:74604350-74604369 Msa0622250:intron 45.0%
!! CATGAGCTCTAGGGAATTTG+TGG - chr4_2:74604359-74604378 Msa0622250:intron 45.0%
TGTATTTACACCCAGTGGAG+AGG - chr4_2:74604419-74604438 Msa0622250:intron 45.0%
TCAATCACAGTAGCACCTTG+AGG + chr4_2:74604592-74604611 None:intergenic 45.0%
CAACAAGATGGTAGCTGCAA+AGG - chr4_2:74604642-74604661 Msa0622250:intron 45.0%
GCTTGCAAATGCAGAAGTTG+TGG - chr4_2:74604805-74604824 Msa0622250:intron 45.0%
!! AGTGATGGATCTGATGCAAC+TGG - chr4_2:74604885-74604904 Msa0622250:intron 45.0%
TGTGCAACCTTGCACACATA+TGG - chr4_2:74604956-74604975 Msa0622250:intron 45.0%
!! CTGATTTGCTAGAAAGTGCC+TGG + chr4_2:74605636-74605655 None:intergenic 45.0%
CTTTCTCAGTGATTCTGACG+GGG - chr4_2:74605902-74605921 Msa0622250:CDS 45.0%
TCCTGCCAGGTTTAGAAAGT+TGG - chr4_2:74606192-74606211 Msa0622250:CDS 45.0%
GCTTGCCAACTTTCTAAACC+TGG + chr4_2:74606200-74606219 None:intergenic 45.0%
AAGCCCATAAAATTGCCTCG+TGG - chr4_2:74606216-74606235 Msa0622250:CDS 45.0%
! GTGCCACGAGGCAATTTTAT+GGG + chr4_2:74606222-74606241 None:intergenic 45.0%
! TGTGCCACGAGGCAATTTTA+TGG + chr4_2:74606223-74606242 None:intergenic 45.0%
CCTCGTGGCACAATATAGAA+GGG - chr4_2:74606231-74606250 Msa0622250:CDS 45.0%
!! TAGAAGGGCATTCCATCCAA+TGG - chr4_2:74606246-74606265 Msa0622250:intron 45.0%
GTTGTATGCATAGACCGAAG+AGG - chr4_2:74606275-74606294 Msa0622250:intron 45.0%
GATCAGGAAGCTTACCTCTT+CGG + chr4_2:74606292-74606311 None:intergenic 45.0%
TCAATCACTCTCTTACCCGT+TGG + chr4_2:74606433-74606452 None:intergenic 45.0%
ACGGGTAAGAGAGTGATTGA+AGG - chr4_2:74606433-74606452 Msa0622250:intron 45.0%
TATTTCAGGCATGATGGCTG+AGG - chr4_2:74606574-74606593 Msa0622250:intron 45.0%
ACATACGGCTATGTCTGAAG+TGG + chr4_2:74606615-74606634 None:intergenic 45.0%
CATAGCCGTATGTTCTTGTG+TGG - chr4_2:74606622-74606641 Msa0622250:intron 45.0%
!!! AAATACCGGGTGTTTTGGGA+TGG - chr4_2:74606965-74606984 Msa0622250:intron 45.0%
TCTAGCATTCAAGAACGCCA+TGG + chr4_2:74607026-74607045 None:intergenic 45.0%
! GATTTGGTTGCAGTTGCACT+AGG - chr4_2:74607047-74607066 Msa0622250:intron 45.0%
GGACGAAACTGTAGTGAGTA+TGG + chr4_2:74607073-74607092 None:intergenic 45.0%
!! GGCTTATTGGGTTAGTGAGT+TGG + chr4_2:74607191-74607210 None:intergenic 45.0%
! GAAGCGAGTGAGTTGAGAGA+GGG + chr4_2:74598697-74598716 None:intergenic 50.0%
! AGAAGCGAGTGAGTTGAGAG+AGG + chr4_2:74598698-74598717 None:intergenic 50.0%
GCTTCTGCACCTTTCATGTC+AGG - chr4_2:74598880-74598899 Msa0622250:three_prime_UTR 50.0%
TGCAATTCTTGGAGAGGGGA+TGG - chr4_2:74599203-74599222 Msa0622250:intron 50.0%
TCTTGGAGAGGGGATGGAAA+TGG - chr4_2:74599209-74599228 Msa0622250:intron 50.0%
CATGTGCGTCGAAATCTCCT+AGG - chr4_2:74599255-74599274 Msa0622250:intron 50.0%
AGAAAGCCGGTAAGAACCCT+AGG + chr4_2:74599275-74599294 None:intergenic 50.0%
GGAAATGCCGAAAACGCCAA+GGG + chr4_2:74599387-74599406 None:intergenic 50.0%
AGGAAATGCCGAAAACGCCA+AGG + chr4_2:74599388-74599407 None:intergenic 50.0%
GGTTCGAACCCTTGACCTAT+TGG - chr4_2:74599669-74599688 Msa0622250:intron 50.0%
ACAGTCACAAGCAGACAGCT+CGG + chr4_2:74599735-74599754 None:intergenic 50.0%
TGTGACGCCAAGTGCTTTGT+CGG + chr4_2:74599917-74599936 None:intergenic 50.0%
ACACTTCACGAGGGATTCTC+TGG - chr4_2:74599934-74599953 Msa0622250:three_prime_UTR 50.0%
TACCTCCCACAAACTTCCAG+GGG + chr4_2:74600043-74600062 None:intergenic 50.0%
GTACCTCCCACAAACTTCCA+GGG + chr4_2:74600044-74600063 None:intergenic 50.0%
TGTACCTCCCACAAACTTCC+AGG + chr4_2:74600045-74600064 None:intergenic 50.0%
GGAGGAAGATACGAGATCAC+GGG + chr4_2:74600196-74600215 None:intergenic 50.0%
GATGGTCAGAAAAGACGCAG+CGG - chr4_2:74600386-74600405 Msa0622250:intron 50.0%
TTCATCCGGTTGAGGTTGCA+CGG - chr4_2:74600423-74600442 Msa0622250:CDS 50.0%
AGAATCCGTGCAACCTCAAC+CGG + chr4_2:74600431-74600450 None:intergenic 50.0%
GTTGAGGTTGCACGGATTCT+TGG - chr4_2:74600431-74600450 Msa0622250:CDS 50.0%
GATTGGGAGTCAATTGCTGC+TGG - chr4_2:74600570-74600589 Msa0622250:intron 50.0%
TGCTACAGTGCGTCACATTG+TGG - chr4_2:74600659-74600678 Msa0622250:intron 50.0%
ACAGTGCGTCACATTGTGGA+AGG - chr4_2:74600663-74600682 Msa0622250:intron 50.0%
TCCCAACTAGGTGTCAAAGC+TGG - chr4_2:74600805-74600824 Msa0622250:intron 50.0%
! CCCAGCTTTGACACCTAGTT+GGG + chr4_2:74600809-74600828 None:intergenic 50.0%
CCCAACTAGGTGTCAAAGCT+GGG - chr4_2:74600806-74600825 Msa0622250:intron 50.0%
CCAACTAGGTGTCAAAGCTG+GGG - chr4_2:74600807-74600826 Msa0622250:intron 50.0%
GGACCTTCGGCAAATGTTTC+TGG - chr4_2:74600880-74600899 Msa0622250:intron 50.0%
!! GTTTCTGGCTATGACAGAGG+AGG - chr4_2:74600895-74600914 Msa0622250:intron 50.0%
CTTATTTGGCAACAGCGCAG+CGG + chr4_2:74601910-74601929 None:intergenic 50.0%
CTTTAACCCATGTGACTGCG+AGG + chr4_2:74602060-74602079 None:intergenic 50.0%
! CTCGCAGTCACATGGGTTAA+AGG - chr4_2:74602058-74602077 Msa0622250:CDS 50.0%
GCTCCTTTGGCAAAGTTGCT+TGG - chr4_2:74602441-74602460 Msa0622250:intron 50.0%
TGCATGCTAGTCCTTAGCCT+TGG + chr4_2:74602505-74602524 None:intergenic 50.0%
! TGCATTGGCACTGAGTTTCG+TGG + chr4_2:74603062-74603081 None:intergenic 50.0%
TAAACCAAAGCCGTGCGTTG+GGG - chr4_2:74603410-74603429 Msa0622250:CDS 50.0%
! ACCAGCTGTGGACTGCATAA+AGG + chr4_2:74603441-74603460 None:intergenic 50.0%
!! CATGTTCTGGGGTTGATCCA+TGG - chr4_2:74603568-74603587 Msa0622250:intron 50.0%
! TGGGGTTGATCCATGGAATC+TGG - chr4_2:74603575-74603594 Msa0622250:intron 50.0%
GAATAGGGGTCCAGATTCCA+TGG + chr4_2:74603588-74603607 None:intergenic 50.0%
GGCATTGCAGCTCACTATAG+TGG - chr4_2:74604029-74604048 Msa0622250:intron 50.0%
TGCCCAGTGGAAAAAGCTCA+AGG - chr4_2:74604087-74604106 Msa0622250:intron 50.0%
GCCCAGTGGAAAAAGCTCAA+GGG - chr4_2:74604088-74604107 Msa0622250:intron 50.0%
!! CCCCTTGAGCTTTTTCCACT+GGG + chr4_2:74604092-74604111 None:intergenic 50.0%
CCCAGTGGAAAAAGCTCAAG+GGG - chr4_2:74604089-74604108 Msa0622250:intron 50.0%
CCAGTGGAAAAAGCTCAAGG+GGG - chr4_2:74604090-74604109 Msa0622250:intron 50.0%
GCGTACTCTGAGTGCAATGT+TGG + chr4_2:74604138-74604157 None:intergenic 50.0%
TCCACTGTTACCTCTCCACT+GGG + chr4_2:74604432-74604451 None:intergenic 50.0%
ATCCACTGTTACCTCTCCAC+TGG + chr4_2:74604433-74604452 None:intergenic 50.0%
AAGCATCACGAACCTGCAGA+CGG + chr4_2:74604532-74604551 None:intergenic 50.0%
AAAGGGGACATGATGCTGCA+GGG - chr4_2:74606119-74606138 Msa0622250:CDS 50.0%
GCCAACTTTCTAAACCTGGC+AGG + chr4_2:74606196-74606215 None:intergenic 50.0%
GCCTCGTGGCACAATATAGA+AGG - chr4_2:74606230-74606249 Msa0622250:CDS 50.0%
CCCTTCTATATTGTGCCACG+AGG + chr4_2:74606234-74606253 None:intergenic 50.0%
CTTATCAAACGACCAGGCTG+AGG - chr4_2:74606751-74606770 Msa0622250:intron 50.0%
GTAGACCATCCCAAAACACC+CGG + chr4_2:74606973-74606992 None:intergenic 50.0%
!!! GGTGTTTTGGGATGGTCTAC+TGG - chr4_2:74606973-74606992 Msa0622250:intron 50.0%
! GATGGTCTACTGGCTGTAGT+TGG - chr4_2:74606983-74607002 Msa0622250:intron 50.0%
! CCATGGTTTTCCATCAGGCT+TGG + chr4_2:74607009-74607028 None:intergenic 50.0%
CCAAGCCTGATGGAAAACCA+TGG - chr4_2:74607006-74607025 Msa0622250:intron 50.0%
! GAACGCCATGGTTTTCCATC+AGG + chr4_2:74607014-74607033 None:intergenic 50.0%
! GAGTGAGTTGAGAGAGGGTG+AGG + chr4_2:74598692-74598711 None:intergenic 55.0%
!! TACCGGCTTTCTTGCGAGCA+CGG - chr4_2:74599283-74599302 Msa0622250:intron 55.0%
TCACAAGCAGACAGCTCGGT+TGG + chr4_2:74599731-74599750 None:intergenic 55.0%
ACTTGGCGTCACACTTCACG+AGG - chr4_2:74599924-74599943 Msa0622250:three_prime_UTR 55.0%
CTTGGCGTCACACTTCACGA+GGG - chr4_2:74599925-74599944 Msa0622250:three_prime_UTR 55.0%
ACTTCCAGGGGAAAACTCGC+TGG + chr4_2:74600031-74600050 None:intergenic 55.0%
TTCCCCTGGAAGTTTGTGGG+AGG - chr4_2:74600038-74600057 Msa0622250:three_prime_UTR 55.0%
GATACGAGATCACGGGCCTA+AGG + chr4_2:74600189-74600208 None:intergenic 55.0%
! CCCCAGCTTTGACACCTAGT+TGG + chr4_2:74600810-74600829 None:intergenic 55.0%
!! TGCTTCACTTGGCTTGGGCT+AGG - chr4_2:74602022-74602041 Msa0622250:CDS 55.0%
!! GCTTCACTTGGCTTGGGCTA+GGG - chr4_2:74602023-74602042 Msa0622250:CDS 55.0%
GCCTTTATGCAGTCCACAGC+TGG - chr4_2:74603437-74603456 Msa0622250:CDS 55.0%
GGGTAAGTGGTTACCAGCTG+TGG + chr4_2:74603453-74603472 None:intergenic 55.0%
!! CCCCCTTGAGCTTTTTCCAC+TGG + chr4_2:74604093-74604112 None:intergenic 55.0%
ACCCAGTGGAGAGGTAACAG+TGG - chr4_2:74604428-74604447 Msa0622250:intron 55.0%
GCATTTGCAAGCACTCGTGC+AGG + chr4_2:74604797-74604816 None:intergenic 55.0%
!! TGGAAGTGCTTGGACACCCA+AGG - chr4_2:74606049-74606068 Msa0622250:intron 55.0%
GCTTGGACACCCAAGGTCAA+TGG - chr4_2:74606056-74606075 Msa0622250:intron 55.0%
CAAAGGGGACATGATGCTGC+AGG - chr4_2:74606118-74606137 Msa0622250:CDS 55.0%
AACGACCAGGCTGAGGTTGA+TGG - chr4_2:74606758-74606777 Msa0622250:intron 55.0%
CTGTAGTTGGCCAAGCCTGA+TGG - chr4_2:74606996-74607015 Msa0622250:intron 55.0%
TAACCCAATAAGCCGGCAGC+AGG - chr4_2:74607197-74607216 Msa0622250:intron 55.0%
CTCAATTGACTGCCTGCTGC+CGG + chr4_2:74607212-74607231 None:intergenic 55.0%
AGCCGTGCTCGCAAGAAAGC+CGG + chr4_2:74599288-74599307 None:intergenic 60.0%
AAACTCGCTGGCAACGTCCG+AGG + chr4_2:74600019-74600038 None:intergenic 60.0%
! GTTGCCAGCGAGTTTTCCCC+TGG - chr4_2:74600024-74600043 Msa0622250:three_prime_UTR 60.0%
ACCTAGGCCTCGCAGTCACA+TGG - chr4_2:74602050-74602069 Msa0622250:CDS 60.0%
CCTAGGCCTCGCAGTCACAT+GGG - chr4_2:74602051-74602070 Msa0622250:CDS 60.0%
CAAAGCCGTGCGTTGGGGTT+GGG - chr4_2:74603415-74603434 Msa0622250:CDS 60.0%
AAAGGCCCAACCCCAACGCA+CGG + chr4_2:74603423-74603442 None:intergenic 60.0%
!! GTTGGAAGTGCTGTGCCCAG+TGG - chr4_2:74604074-74604093 Msa0622250:intron 60.0%
GGCTGAGGTCGCTACAGCAT+TGG - chr4_2:74606589-74606608 Msa0622250:intron 60.0%
!! GACCAGGCTGAGGTTGATGG+CGG - chr4_2:74606761-74606780 Msa0622250:intron 60.0%
TTCCGCCATCAACCTCAGCC+TGG + chr4_2:74606766-74606785 None:intergenic 60.0%
!! AGGCTGAGGTTGATGGCGGA+AGG - chr4_2:74606765-74606784 Msa0622250:intron 60.0%
!! GGCTGAGGTTGATGGCGGAA+GGG - chr4_2:74606766-74606785 Msa0622250:intron 60.0%
!! GCTGAGGTTGATGGCGGAAG+GGG - chr4_2:74606767-74606786 Msa0622250:intron 60.0%
!! GGTTGATGGCGGAAGGGGAA+TGG - chr4_2:74606772-74606791 Msa0622250:CDS 60.0%
!! CTGCCTGCTGCCGGCTTATT+GGG + chr4_2:74607203-74607222 None:intergenic 60.0%
!! ACTGCCTGCTGCCGGCTTAT+TGG + chr4_2:74607204-74607223 None:intergenic 60.0%
!! CACTTGGCTTGGGCTAGGGC+CGG - chr4_2:74602027-74602046 Msa0622250:CDS 65.0%
GTGACTGCGAGGCCTAGGTC+CGG + chr4_2:74602049-74602068 None:intergenic 65.0%
CCCATGTGACTGCGAGGCCT+AGG + chr4_2:74602054-74602073 None:intergenic 65.0%
CCAACCCCAACGCACGGCTT+TGG + chr4_2:74603417-74603436 None:intergenic 65.0%
CCAAAGCCGTGCGTTGGGGT+TGG - chr4_2:74603414-74603433 Msa0622250:CDS 65.0%
! CTTGGGCTAGGGCCGGACCT+AGG - chr4_2:74602034-74602053 Msa0622250:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 74598620 74607519 74598620 ID=Msa0622250;Name=Msa0622250
chr4_2 mRNA 74598620 74607519 74598620 ID=Msa0622250-mRNA-1;Parent=Msa0622250;Name=Msa0622250-mRNA-1;_AED=0.10;_eAED=0.10;_QI=257|1|1|1|0.91|0.95|24|1170|659
chr4_2 exon 74598620 74599199 74598620 ID=Msa0622250-mRNA-1:exon:22596;Parent=Msa0622250-mRNA-1
chr4_2 exon 74599304 74599372 74599304 ID=Msa0622250-mRNA-1:exon:22595;Parent=Msa0622250-mRNA-1
chr4_2 exon 74599496 74599557 74599496 ID=Msa0622250-mRNA-1:exon:22594;Parent=Msa0622250-mRNA-1
chr4_2 exon 74599843 74600296 74599843 ID=Msa0622250-mRNA-1:exon:22593;Parent=Msa0622250-mRNA-1
chr4_2 exon 74600416 74600502 74600416 ID=Msa0622250-mRNA-1:exon:22592;Parent=Msa0622250-mRNA-1
chr4_2 exon 74601272 74601366 74601272 ID=Msa0622250-mRNA-1:exon:22591;Parent=Msa0622250-mRNA-1
chr4_2 exon 74601476 74601562 74601476 ID=Msa0622250-mRNA-1:exon:22590;Parent=Msa0622250-mRNA-1
chr4_2 exon 74601699 74601830 74601699 ID=Msa0622250-mRNA-1:exon:22589;Parent=Msa0622250-mRNA-1
chr4_2 exon 74601988 74602146 74601988 ID=Msa0622250-mRNA-1:exon:22588;Parent=Msa0622250-mRNA-1
chr4_2 exon 74602301 74602402 74602301 ID=Msa0622250-mRNA-1:exon:22587;Parent=Msa0622250-mRNA-1
chr4_2 exon 74602524 74602580 74602524 ID=Msa0622250-mRNA-1:exon:22586;Parent=Msa0622250-mRNA-1
chr4_2 exon 74602681 74602743 74602681 ID=Msa0622250-mRNA-1:exon:22585;Parent=Msa0622250-mRNA-1
chr4_2 exon 74602845 74602905 74602845 ID=Msa0622250-mRNA-1:exon:22584;Parent=Msa0622250-mRNA-1
chr4_2 exon 74603087 74603184 74603087 ID=Msa0622250-mRNA-1:exon:22583;Parent=Msa0622250-mRNA-1
chr4_2 exon 74603351 74603458 74603351 ID=Msa0622250-mRNA-1:exon:22582;Parent=Msa0622250-mRNA-1
chr4_2 exon 74603660 74603731 74603660 ID=Msa0622250-mRNA-1:exon:22581;Parent=Msa0622250-mRNA-1
chr4_2 exon 74605028 74605105 74605028 ID=Msa0622250-mRNA-1:exon:22580;Parent=Msa0622250-mRNA-1
chr4_2 exon 74605223 74605324 74605223 ID=Msa0622250-mRNA-1:exon:22579;Parent=Msa0622250-mRNA-1
chr4_2 exon 74605444 74605575 74605444 ID=Msa0622250-mRNA-1:exon:22578;Parent=Msa0622250-mRNA-1
chr4_2 exon 74605679 74605771 74605679 ID=Msa0622250-mRNA-1:exon:22577;Parent=Msa0622250-mRNA-1
chr4_2 exon 74605890 74605955 74605890 ID=Msa0622250-mRNA-1:exon:22576;Parent=Msa0622250-mRNA-1
chr4_2 exon 74606080 74606259 74606080 ID=Msa0622250-mRNA-1:exon:22575;Parent=Msa0622250-mRNA-1
chr4_2 exon 74606772 74606959 74606772 ID=Msa0622250-mRNA-1:exon:22574;Parent=Msa0622250-mRNA-1
chr4_2 exon 74607238 74607519 74607238 ID=Msa0622250-mRNA-1:exon:22573;Parent=Msa0622250-mRNA-1
chr4_2 five_prime_UTR 74607263 74607519 74607263 ID=Msa0622250-mRNA-1:five_prime_utr;Parent=Msa0622250-mRNA-1
chr4_2 CDS 74607238 74607262 74607238 ID=Msa0622250-mRNA-1:cds;Parent=Msa0622250-mRNA-1
chr4_2 CDS 74606772 74606959 74606772 ID=Msa0622250-mRNA-1:cds;Parent=Msa0622250-mRNA-1
chr4_2 CDS 74606080 74606259 74606080 ID=Msa0622250-mRNA-1:cds;Parent=Msa0622250-mRNA-1
chr4_2 CDS 74605890 74605955 74605890 ID=Msa0622250-mRNA-1:cds;Parent=Msa0622250-mRNA-1
chr4_2 CDS 74605679 74605771 74605679 ID=Msa0622250-mRNA-1:cds;Parent=Msa0622250-mRNA-1
chr4_2 CDS 74605444 74605575 74605444 ID=Msa0622250-mRNA-1:cds;Parent=Msa0622250-mRNA-1
chr4_2 CDS 74605223 74605324 74605223 ID=Msa0622250-mRNA-1:cds;Parent=Msa0622250-mRNA-1
chr4_2 CDS 74605028 74605105 74605028 ID=Msa0622250-mRNA-1:cds;Parent=Msa0622250-mRNA-1
chr4_2 CDS 74603660 74603731 74603660 ID=Msa0622250-mRNA-1:cds;Parent=Msa0622250-mRNA-1
chr4_2 CDS 74603351 74603458 74603351 ID=Msa0622250-mRNA-1:cds;Parent=Msa0622250-mRNA-1
chr4_2 CDS 74603087 74603184 74603087 ID=Msa0622250-mRNA-1:cds;Parent=Msa0622250-mRNA-1
chr4_2 CDS 74602845 74602905 74602845 ID=Msa0622250-mRNA-1:cds;Parent=Msa0622250-mRNA-1
chr4_2 CDS 74602681 74602743 74602681 ID=Msa0622250-mRNA-1:cds;Parent=Msa0622250-mRNA-1
chr4_2 CDS 74602524 74602580 74602524 ID=Msa0622250-mRNA-1:cds;Parent=Msa0622250-mRNA-1
chr4_2 CDS 74602301 74602402 74602301 ID=Msa0622250-mRNA-1:cds;Parent=Msa0622250-mRNA-1
chr4_2 CDS 74601988 74602146 74601988 ID=Msa0622250-mRNA-1:cds;Parent=Msa0622250-mRNA-1
chr4_2 CDS 74601699 74601830 74601699 ID=Msa0622250-mRNA-1:cds;Parent=Msa0622250-mRNA-1
chr4_2 CDS 74601476 74601562 74601476 ID=Msa0622250-mRNA-1:cds;Parent=Msa0622250-mRNA-1
chr4_2 CDS 74601272 74601366 74601272 ID=Msa0622250-mRNA-1:cds;Parent=Msa0622250-mRNA-1
chr4_2 CDS 74600421 74600502 74600421 ID=Msa0622250-mRNA-1:cds;Parent=Msa0622250-mRNA-1
chr4_2 three_prime_UTR 74600416 74600420 74600416 ID=Msa0622250-mRNA-1:three_prime_utr;Parent=Msa0622250-mRNA-1
chr4_2 three_prime_UTR 74599843 74600296 74599843 ID=Msa0622250-mRNA-1:three_prime_utr;Parent=Msa0622250-mRNA-1
chr4_2 three_prime_UTR 74599496 74599557 74599496 ID=Msa0622250-mRNA-1:three_prime_utr;Parent=Msa0622250-mRNA-1
chr4_2 three_prime_UTR 74599304 74599372 74599304 ID=Msa0622250-mRNA-1:three_prime_utr;Parent=Msa0622250-mRNA-1
chr4_2 three_prime_UTR 74598620 74599199 74598620 ID=Msa0622250-mRNA-1:three_prime_utr;Parent=Msa0622250-mRNA-1
Gene Sequence

>Msa0622250

ATGGCTTCTGCACCTTTCATGTCAGTTTCTTTGGAGTGTGTGAATGTATGCAATTCTTGGAGAGGGGATGGAAATGGAAAATATGATTGTAATCATCTATCATGTGCGTCGAAATCTCCTAGGGTTCTTACCGGCTTTCTTGCGAGCACGGCTCATCCTCATCAATATTTTTTGTTGAATGGTCGAAATGGAAGAAGTAACCAGTTTAATTTTGCATGTGAAGCTTTTAGTATAGTAGGTTCATATTCCGACAAAGCACTTGGCGTCACACTTCACGAGGGATTCTCTGGATCTATCTTTTCTAGATTTGCATCTAGAGAATGGCAGTTGTCTTGTTCTTCGGTTTTTTCCTCGGACGTTGCCAGCGAGTTTTCCCCTGGAAGTTTGTGGGAGGACCTTAGGCCCGTGATCTCGTATCTTCCTCCTAAAGAACTGGAGTTAGTCCATAATGCTTTTACGTTGGCATTTAAAGCTCACGATGGTCAGAAAAGACGCAGCGGCGAACCCTTCATCATTCATCCGGTTGAGGTTGCACGGATTCTTGGAGAACTCGAACTTGATTGGGAGTCAATTGCTGCTGGATTACTTCATGACACGGTTGAAGATACAGATGTTGTGACTTTTGAGAGGATAGAGGAGGAATTTGGTGCTACAGTGCGTCACATTGTGGAAGGAGAGACTAAGGTGTCAAAGCTGGGGAAGTTGAAGTACAAGAATGAAAATGATTCTGTTCAAGATGTGAAAGCAGAGGACCTTCGGCAAATGTTTCTGGCTATGACAGAGGAGGTTCGTGTTATTATCGTCAAATTAGCAGACAGGTTACATAACATGCGCACTCTTTCACATATGCCTCCACATAAACAGAATAGCATTGCAATGGAGACATTACAGGTATTTGCTCCTTTGGCAAAGTTGCTTGGGATGTATCAAATTAAGTCAGAACTAGAAAATCTATCATTTATGTACACAAATCCTGAAGATTATGCAAAGGTGAAGAGAAGAGTTGCCGACCTATTCAAAGAACATGAGAAAGATCTTTTAGAGGCGAACAAAATATTGTTAAAGAAAATCCAAGATGATCAATTCTTAGACCTTATGACAGTTAAAACGGAAGTTCGTGCTGTGTGTAAAGAGCCTTACAGTGTCTATAAAGCTGTGCTCAAATCTAAAAGCTTGATCAATGAGATTAACCAAATTGCACAGCTTCGTATCATTATTAAACCAAAGCCGTGCGTTGGGGTTGGGCCTTTATGCAGTCCACAGCTGATTTGCTATCATGTTCTGGGGTTGATCCATGGAATCTGGACCCCTATTCCTAGATCTGTGAAGGATTATATTGCAACCCCTAAACCTAATGGGTACAAAAGTCTTCATAGCACTGTGATTCCATTTTTGTATGAGAGTATGTTCAGGCTTGAAATACAGATTAGAACAGAAGAAATGGATTTGATAGCTGAGAGGGGCATTGCAGCTCACTATAGTGGGAGAGAATTCGTTACTGGCTTGGTTGGAAGTGCTGTGCCCAGTGGAAAAAGCTCAAGGGGGAAGACAGTGTGTCTTAGCAATGCCAACATTGCACTCAGAATTGGCTGGCTCAATGCTATTAGAGAGTGGCAAGAAGAGTTTGTTGGCAACATGAGCTCTAGGGAATTTGTGGACACTGTTACAAGAGATCTTCTGGGCAGTCGTGTCTTTGTATTTACACCCAGTGGAGAGATTAAGAATCTTCCTCAAGGTGCTACTGTGATTGACTATGCTTATATGATACACACTGAAATTGGCAACAAGATGGTAGCTGCAAAGGTCAACGGAAATCTTGTTTCTCCTGCACGAGTGCTTGCAAATGCAGAAGTTGTGGAGATAATCACATATAATGTCAGTATTGTTAACCTCACCCAGCACTTTCTAGCAAATCAGCTTTTCAAAGGCATAAGCAGTGGTTGCAACATGCTAAAACACGGAGTGCAAGACACAAAATAA
Protein sequence

>Msa0622250

MASAPFMSVSLECVNVCNSWRGDGNGKYDCNHLSCASKSPRVLTGFLASTAHPHQYFLLNGRNGRSNQFNFACEAFSIVGSYSDKALGVTLHEGFSGSIFSRFASREWQLSCSSVFSSDVASEFSPGSLWEDLRPVISYLPPKELELVHNAFTLAFKAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTDVVTFERIEEEFGATVRHIVEGETKVSKLGKLKYKNENDSVQDVKAEDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQNSIAMETLQVFAPLAKLLGMYQIKSELENLSFMYTNPEDYAKVKRRVADLFKEHEKDLLEANKILLKKIQDDQFLDLMTVKTEVRAVCKEPYSVYKAVLKSKSLINEINQIAQLRIIIKPKPCVGVGPLCSPQLICYHVLGLIHGIWTPIPRSVKDYIATPKPNGYKSLHSTVIPFLYESMFRLEIQIRTEEMDLIAERGIAAHYSGREFVTGLVGSAVPSGKSSRGKTVCLSNANIALRIGWLNAIREWQEEFVGNMSSREFVDTVTRDLLGSRVFVFTPSGEIKNLPQGATVIDYAYMIHTEIGNKMVAAKVNGNLVSPARVLANAEVVEIITYNVSIVNLTQHFLANQLFKGISSGCNMLKHGVQDTK*