AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1358340


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1358340 MtrunA17_Chr7g0269591 98.528 883 13 0 1 883 1 883 0.0 1816
Msa1358340 MtrunA17_Chr8g0344131 38.810 353 189 8 146 497 221 547 1.81e-61 222
Msa1358340 MtrunA17_Chr4g0069291 30.395 329 199 7 175 492 120 429 1.31e-37 149
Msa1358340 MtrunA17_Chr5g0395711 37.054 224 129 5 126 339 108 329 1.86e-34 142
Msa1358340 MtrunA17_Chr5g0395711 36.364 121 71 2 377 497 451 565 1.47e-15 81.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1358340 AT4G02260.2 69.032 888 265 8 1 883 1 883 0.0 1245
Msa1358340 AT4G02260.1 68.954 889 265 9 1 883 1 884 0.0 1241
Msa1358340 AT4G02260.4 68.018 888 259 9 1 883 1 868 0.0 1215
Msa1358340 AT4G02260.3 69.485 816 231 9 1 807 1 807 0.0 1137
Msa1358340 AT1G54130.1 37.853 354 195 7 144 497 211 539 2.85e-62 224
Msa1358340 AT3G14050.1 39.045 356 184 9 146 497 209 535 4.01e-62 224
Msa1358340 AT3G17470.3 31.288 326 198 11 180 495 122 431 1.31e-36 144
Msa1358340 AT3G17470.2 29.504 383 234 14 180 551 137 494 1.67e-36 146
Msa1358340 AT3G17470.1 30.532 357 213 13 180 526 122 453 1.86e-36 146

Find 241 sgRNAs with CRISPR-Local

Find 577 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCAGGACTTCTTTATATTT+TGG 0.117821 tig0016225:+9228 None:intergenic
TGAAGGAAATTTAGAAAATT+TGG 0.135903 tig0016225:-8590 Msa1358340:intron
GGACCTTCGGCAAATGTTTC+TGG 0.140517 tig0016225:-14525 Msa1358340:CDS
ACTGCCTGCTGCCGGCTTAT+TGG 0.169000 tig0016225:+8203 None:intergenic
ACATTTATATGTCTAAATTT+TGG 0.179818 tig0016225:-8262 Msa1358340:three_prime_UTR
GCAGATTTGCTATCATGTTC+TGG 0.190657 tig0016225:-11849 Msa1358340:intron
CTGCCTGCTGCCGGCTTATT+GGG 0.208464 tig0016225:+8204 None:intergenic
GTTTATTGAAATGCGGATTC+TGG 0.208918 tig0016225:-7911 Msa1358340:three_prime_UTR
CAAAGCAAACCTGTGCAATT+TGG 0.221140 tig0016225:+12123 None:intergenic
TCCTCTGTTTCTCTCAATTA+TGG 0.228332 tig0016225:-16429 Msa1358340:exon
CACTGTTACAAGAGATCTTC+TGG 0.241677 tig0016225:-11021 Msa1358340:CDS
GAGAGGATAGAGGAGGAATT+TGG 0.243763 tig0016225:-14769 Msa1358340:CDS
TGGACTAACTCCAGTTCTTT+AGG 0.245830 tig0016225:+15191 None:intergenic
AGATCAAATACCGGGTGTTT+TGG 0.268009 tig0016225:-8444 Msa1358340:CDS
CCAGTAGCTCCAAACATAAA+AGG 0.272058 tig0016225:-9449 Msa1358340:CDS
TATATGATACACACTGAAAT+TGG 0.278187 tig0016225:-10785 Msa1358340:CDS
TTCACCTTTGCATAATCTTC+AGG 0.279113 tig0016225:+12688 None:intergenic
GTTTGTTATCTGTCTTTCTT+TGG 0.279933 tig0016225:-16618 Msa1358340:five_prime_UTR
GCTTGGGATGTATCAAATTA+AGG 0.281559 tig0016225:-12947 Msa1358340:intron
CTCCTTTGGCAAAGTTGCTT+GGG 0.299059 tig0016225:-12963 Msa1358340:CDS
CTGTGTGTAAAGAGCCTTAC+AGG 0.317355 tig0016225:-12374 Msa1358340:intron
GTTGAGGTTGCACGGATTCT+TGG 0.319585 tig0016225:-14974 Msa1358340:CDS
CTTTCTCATGTTCTTTGAAT+AGG 0.319692 tig0016225:+12650 None:intergenic
CAGATTTGCTATCATGTTCT+GGG 0.322566 tig0016225:-11848 Msa1358340:CDS
GAAGATGGTTATTGCGGTTA+TGG 0.323552 tig0016225:+16527 None:intergenic
TACATACAGATCTAGGAATA+GGG 0.332916 tig0016225:+11804 None:intergenic
CCTCCATAACCTATCATTCA+TGG 0.340153 tig0016225:-16472 Msa1358340:five_prime_UTR
ATTACAGGTATTTGCTCCTT+TGG 0.341930 tig0016225:-12977 Msa1358340:CDS
GCTCCTTTGGCAAAGTTGCT+TGG 0.345703 tig0016225:-12964 Msa1358340:CDS
AGAAAAGAGTGATAGGATAA+AGG 0.346272 tig0016225:-8133 Msa1358340:three_prime_UTR
TTGTGTGGACCGAGCGTAAC+AGG 0.346600 tig0016225:-16666 Msa1358340:five_prime_UTR
ATACATACAGATCTAGGAAT+AGG 0.350804 tig0016225:+11803 None:intergenic
GCCTCGTGGCACAATATAGA+AGG 0.351249 tig0016225:-9174 Msa1358340:CDS
AGTGGGAGAGAATTCGTTAC+TGG 0.356793 tig0016225:-11357 Msa1358340:CDS
AGCTTACCGTAAAAGCATTA+TGG 0.356855 tig0016225:+15171 None:intergenic
TTCTTGAATGCTAGATGATT+TGG 0.366759 tig0016225:-8373 Msa1358340:exon
CATTTGTCCAGGAACTTGAT+TGG 0.368685 tig0016225:-14852 Msa1358340:intron
CAAAGCCGTGCGTTGGGGTT+GGG 0.369858 tig0016225:-11989 Msa1358340:CDS
ATTCCATGAATGATAGGTTA+TGG 0.371415 tig0016225:+16469 None:intergenic
TATGTATATAAAAGAAGAAA+TGG 0.372548 tig0016225:+7940 None:intergenic
TGTACCTCCCACAAACTTCC+AGG 0.375552 tig0016225:+15363 None:intergenic
ATTGCAACCCCTAAACCTAA+TGG 0.376245 tig0016225:-11655 Msa1358340:CDS
ATTGTTAACTTGAATCATAT+TGG 0.380037 tig0016225:+9251 None:intergenic
CATTGCAATGGAGACATTAC+AGG 0.381847 tig0016225:-12992 Msa1358340:CDS
GGCTTATTGGGTTAGTGAGT+TGG 0.383188 tig0016225:+8216 None:intergenic
TTAAACCAAAGCCGTGCGTT+GGG 0.385297 tig0016225:-11995 Msa1358340:CDS
CAATGATTACAGATCAGTTC+TGG 0.385820 tig0016225:-8312 Msa1358340:three_prime_UTR
TGGGGTTGATCCATGGAATC+TGG 0.390644 tig0016225:-11829 Msa1358340:CDS
GGTCTAAGAATTGATCATCT+TGG 0.398616 tig0016225:+12424 None:intergenic
GATTGAATTCCATGAATGAT+AGG 0.398665 tig0016225:+16463 None:intergenic
ACACTTCACGAGGGATTCTC+TGG 0.400032 tig0016225:-15471 Msa1358340:CDS
TATGTTCAGGCTTGAAATAC+AGG 0.403830 tig0016225:-11587 Msa1358340:intron
GTAGATTAGAACAGAAGAAA+TGG 0.405177 tig0016225:-11415 Msa1358340:intron
CCAACCCCAACGCACGGCTT+TGG 0.406391 tig0016225:+11990 None:intergenic
ATGGCAGTTGTCTTGTTCTT+CGG 0.412219 tig0016225:-15418 Msa1358340:CDS
CGTGTGCGTCGAAAGCTCCT+AGG 0.413502 tig0016225:-16033 Msa1358340:CDS
TTTATTGAAATGCGGATTCT+GGG 0.416403 tig0016225:-7910 Msa1358340:three_prime_UTR
CATGAGCTCTAGGGAATTTG+TGG 0.417115 tig0016225:-11045 Msa1358340:CDS
ACATATGCCTCCACATAAAC+AGG 0.418695 tig0016225:-14315 Msa1358340:intron
GTGTGAATGTATGCAATTCT+TGG 0.422183 tig0016225:-16096 Msa1358340:CDS
CTCAATTGACTGCCTGCTGC+CGG 0.422716 tig0016225:+8195 None:intergenic
ACCAGCTGTGGACTGCATAA+AGG 0.423090 tig0016225:+11966 None:intergenic
AACGACCAGGCTGAGGTTGA+TGG 0.426492 tig0016225:-8646 Msa1358340:intron
AAAGCTCCTAGGGTTCTTAC+CGG 0.427384 tig0016225:-16022 Msa1358340:CDS
TGTATATAGAAAAGAGTGAT+AGG 0.427510 tig0016225:-8140 Msa1358340:three_prime_UTR
GGACGAAACTGTAGTGAGTA+TGG 0.428483 tig0016225:+8334 None:intergenic
GGCATTGCAGCTCACTATAG+TGG 0.428991 tig0016225:-11375 Msa1358340:CDS
ATTTGTCCAGGAACTTGATT+GGG 0.429628 tig0016225:-14851 Msa1358340:intron
TGTGACGCCAAGTGCTTTGT+CGG 0.430385 tig0016225:+15491 None:intergenic
CAGAACTGATCTGTAATCAT+TGG 0.430971 tig0016225:+8313 None:intergenic
CTAGATTTGCATCTAGAGAA+TGG 0.434783 tig0016225:-15437 Msa1358340:CDS
CAGTAGCTCCAAACATAAAA+GGG 0.435513 tig0016225:-9448 Msa1358340:CDS
GTATCTTCCTCCTAAAGAAC+TGG 0.435659 tig0016225:-15201 Msa1358340:CDS
AGAATCCGTGCAACCTCAAC+CGG 0.436241 tig0016225:+14977 None:intergenic
TCCCAACTAGGTGTCAAAGC+TGG 0.436553 tig0016225:-14600 Msa1358340:intron
AACAATTATTTCAGGCATGA+TGG 0.437402 tig0016225:-8836 Msa1358340:intron
GATTGGGAGTCAATTGCTGC+TGG 0.437948 tig0016225:-14835 Msa1358340:CDS
TTGCAACCCCTAAACCTAAT+GGG 0.442273 tig0016225:-11654 Msa1358340:CDS
CAAGCACTTTATCACACGTT+TGG 0.445614 tig0016225:+8034 None:intergenic
GCTTCTGCACCTTTCATGTC+AGG 0.448291 tig0016225:-16407 Msa1358340:intron
TCCTGCCAGGTTTAGAAAGT+TGG 0.448380 tig0016225:-9212 Msa1358340:CDS
AACAAAATACATACAGATCT+AGG 0.449095 tig0016225:+11797 None:intergenic
GCCTTTATGCAGTCCACAGC+TGG 0.449575 tig0016225:-11967 Msa1358340:intron
TCTTGGAGAGGGGATGGAAA+TGG 0.451251 tig0016225:-16079 Msa1358340:CDS
CCAAAGCCGTGCGTTGGGGT+TGG 0.452445 tig0016225:-11990 Msa1358340:CDS
GAGAGAATTCGTTACTGGCT+TGG 0.454991 tig0016225:-11352 Msa1358340:CDS
CTTCATCATTCATCCGGTTG+AGG 0.455435 tig0016225:-14990 Msa1358340:CDS
TGATAGGTTATGGAGGAGAA+GGG 0.455820 tig0016225:+16479 None:intergenic
GTTATGTTATTTCAAGTTGA+AGG 0.457526 tig0016225:-8607 Msa1358340:CDS
GCTGAGGTTGATGGCGGAAG+GGG 0.457562 tig0016225:-8637 Msa1358340:CDS
ATGTAAATTTGAAGGGCAAA+GGG 0.462707 tig0016225:-9302 Msa1358340:CDS
ATGGAAATTACCTGTTTATG+TGG 0.465464 tig0016225:+14305 None:intergenic
CCCAACTAGGTGTCAAAGCT+GGG 0.468219 tig0016225:-14599 Msa1358340:intron
ATGTGAAAGCAGAGGACCTT+CGG 0.473982 tig0016225:-14538 Msa1358340:CDS
AGGCTGAGGTTGATGGCGGA+AGG 0.474494 tig0016225:-8639 Msa1358340:CDS
ATGATAGGTTATGGAGGAGA+AGG 0.478020 tig0016225:+16478 None:intergenic
TCTAATTGCATCAGGACCTT+AGG 0.478487 tig0016225:-15235 Msa1358340:intron
AGACCTTATGACAGTTAAAA+CGG 0.479370 tig0016225:-12406 Msa1358340:CDS
ATCCACTGTTACCTCTCCAC+TGG 0.480367 tig0016225:+10974 None:intergenic
ATTTACACAAGGAGCTTGCT+AGG 0.482615 tig0016225:-8082 Msa1358340:three_prime_UTR
CGTGCATCATGTAAATTTGA+AGG 0.483447 tig0016225:-9310 Msa1358340:CDS
TTGTTGGCAACATGAGCTCT+AGG 0.486743 tig0016225:-11055 Msa1358340:CDS
ACTGTCCTTCAGAGTAAGAA+TGG 0.489568 tig0016225:-9375 Msa1358340:CDS
GATCAGGAAGCTTACCTCTT+CGG 0.489957 tig0016225:+9115 None:intergenic
CTCTAGAGTAGATCAAATAC+CGG 0.491186 tig0016225:-8453 Msa1358340:CDS
GAAGAAGAAGAGAGTGAGAG+TGG 0.495102 tig0016225:+16556 None:intergenic
CAAAGGGGACATGATGCTGC+AGG 0.497067 tig0016225:-9286 Msa1358340:CDS
GCTTGGACACCCAAGGTCAA+TGG 0.497685 tig0016225:-9348 Msa1358340:CDS
GGCTGAGGTTGATGGCGGAA+GGG 0.499777 tig0016225:-8638 Msa1358340:CDS
GAATTCGTTACTGGCTTGGT+TGG 0.500544 tig0016225:-11348 Msa1358340:CDS
GAAGGGGAAGAGAATTGAAT+CGG 0.501625 tig0016225:+16496 None:intergenic
CATGTTCTGGGGTTGATCCA+TGG 0.504046 tig0016225:-11836 Msa1358340:CDS
GTGCTTGGTATAATGAGGAT+AGG 0.504068 tig0016225:-8018 Msa1358340:three_prime_UTR
CTTGAATCATATTGGCGACA+TGG 0.505746 tig0016225:+9259 None:intergenic
ACTTTCTCAGTGATTCTGAC+GGG 0.507221 tig0016225:-9503 Msa1358340:CDS
GTGTGCGTCGAAAGCTCCTA+GGG 0.507861 tig0016225:-16032 Msa1358340:CDS
AGAAGCGAGTGAGTTGAGAG+AGG 0.509407 tig0016225:+16589 None:intergenic
CTCAACCGGATGAATGATGA+AGG 0.509670 tig0016225:+14991 None:intergenic
CGAACCCTTCATCATTCATC+CGG 0.509821 tig0016225:-14996 Msa1358340:CDS
GAGTGGCAAGAAGAGTTTGT+TGG 0.510210 tig0016225:-11071 Msa1358340:CDS
AGAGTAAGAATGGAAGTGCT+TGG 0.510899 tig0016225:-9365 Msa1358340:CDS
GGTTGATGGCGGAAGGGGAA+TGG 0.511538 tig0016225:-8632 Msa1358340:CDS
TTCATCCGGTTGAGGTTGCA+CGG 0.513436 tig0016225:-14982 Msa1358340:CDS
GGCTGAGGTCGCTACAGCAT+TGG 0.515456 tig0016225:-8815 Msa1358340:CDS
TTATCGTCAAATTAGCAGAC+AGG 0.517261 tig0016225:-14361 Msa1358340:CDS
ATTAAACCAAAGCCGTGCGT+TGG 0.519871 tig0016225:-11996 Msa1358340:CDS
TGCAATTCTTGGAGAGGGGA+TGG 0.519916 tig0016225:-16085 Msa1358340:CDS
TAACCCAATAAGCCGGCAGC+AGG 0.520630 tig0016225:-8207 Msa1358340:three_prime_UTR
GATAGGTTATGGAGGAGAAG+GGG 0.522033 tig0016225:+16480 None:intergenic
TGAGATTAACCAAATTGCAC+AGG 0.524101 tig0016225:-12132 Msa1358340:intron
TCATATTCCGACAAAGCACT+TGG 0.525417 tig0016225:-15498 Msa1358340:CDS
AAATATAAAGAAGTCCTGCC+AGG 0.526449 tig0016225:-9225 Msa1358340:CDS
GATTTGGTTGCAGTTGCACT+AGG 0.526451 tig0016225:-8357 Msa1358340:three_prime_UTR
GATGGTCTACTGGCTGTAGT+TGG 0.526752 tig0016225:-8421 Msa1358340:CDS
CATTGTGGAAGGAGAGACTA+AGG 0.527478 tig0016225:-14731 Msa1358340:intron
TGCTTGGTATAATGAGGATA+GGG 0.528040 tig0016225:-8017 Msa1358340:three_prime_UTR
GCATTTGCAAGCACTCGTGC+AGG 0.528305 tig0016225:+10610 None:intergenic
GAAGCGAGTGAGTTGAGAGA+GGG 0.528650 tig0016225:+16590 None:intergenic
GAATCGGAAAATCGAGAAGA+TGG 0.528808 tig0016225:+16512 None:intergenic
GAGTGAGTTGAGAGAGGGTG+AGG 0.528895 tig0016225:+16595 None:intergenic
CTGTAGTTGGCCAAGCCTGA+TGG 0.529497 tig0016225:-8408 Msa1358340:CDS
CAACAAGATGGTAGCTGCAA+AGG 0.530841 tig0016225:-10762 Msa1358340:intron
GTTTCGTGGATTAACCTGTA+AGG 0.534166 tig0016225:+12360 None:intergenic
CATGTAAATTTGAAGGGCAA+AGG 0.535165 tig0016225:-9303 Msa1358340:CDS
CTCATGTTCTTTGAATAGGT+CGG 0.536108 tig0016225:+12654 None:intergenic
GAATAGGGGTCCAGATTCCA+TGG 0.537999 tig0016225:+11819 None:intergenic
TGCATACAACAGATAACCAT+TGG 0.538972 tig0016225:+9142 None:intergenic
GCCAACTTTCTAAACCTGGC+AGG 0.545096 tig0016225:+9211 None:intergenic
TGCAAGACACAAAATAATGA+AGG 0.547606 tig0016225:-9702 Msa1358340:intron
GCTTGCCAACTTTCTAAACC+TGG 0.549616 tig0016225:+9207 None:intergenic
TTTGTACCCATTAGGTTTAG+GGG 0.551930 tig0016225:+11648 None:intergenic
TATTTCAGGCATGATGGCTG+AGG 0.552186 tig0016225:-8830 Msa1358340:intron
AGAAAGCCGGTAAGAACCCT+AGG 0.552414 tig0016225:+16016 None:intergenic
GATACGAGATCACGGGCCTA+AGG 0.552517 tig0016225:+15219 None:intergenic
ACTGTTACAAGAGATCTTCT+GGG 0.552683 tig0016225:-11020 Msa1358340:CDS
CACTTCCATTCTTACTCTGA+AGG 0.552893 tig0016225:+9370 None:intergenic
CAAACGTGTGATAAAGTGCT+TGG 0.554082 tig0016225:-8033 Msa1358340:three_prime_UTR
TACAACAGATAACCATTGGA+TGG 0.554913 tig0016225:+9146 None:intergenic
GCGTACTCTGAGTGCAATGT+TGG 0.561487 tig0016225:+11269 None:intergenic
AGCTGTGCTTGCAAGAAAGC+CGG 0.562369 tig0016225:+16003 None:intergenic
CACTGAAATTGGCAACAAGA+TGG 0.562829 tig0016225:-10774 Msa1358340:CDS
ACTTCCAGGGGAAAACTCGC+TGG 0.564635 tig0016225:+15377 None:intergenic
AATGGATTTGATAGCTGAGA+GGG 0.567318 tig0016225:-11397 Msa1358340:CDS
GGGTAAGTGGTTACCAGCTG+TGG 0.569013 tig0016225:+11954 None:intergenic
GACTTTCTCAGTGATTCTGA+CGG 0.576627 tig0016225:-9504 Msa1358340:CDS
TTTCAGAAACTCAAAACTGA+AGG 0.578494 tig0016225:-8166 Msa1358340:three_prime_UTR
TGCTGGATTACTTCATGACA+CGG 0.579642 tig0016225:-14818 Msa1358340:CDS
GAAATTACCTGTTTATGTGG+AGG 0.581208 tig0016225:+14308 None:intergenic
TAAACCAAAGCCGTGCGTTG+GGG 0.582851 tig0016225:-11994 Msa1358340:CDS
ATGTATGCAATTCTTGGAGA+GGG 0.584331 tig0016225:-16090 Msa1358340:CDS
ATGAGATATCCTGTTACGCT+CGG 0.584605 tig0016225:+16657 None:intergenic
TGTTGGCAACATGAGCTCTA+GGG 0.586013 tig0016225:-11054 Msa1358340:CDS
GTCTTTGTATTTACACCCAG+TGG 0.587156 tig0016225:-10990 Msa1358340:CDS
ACTCACCACACAAGAACATA+CGG 0.588943 tig0016225:+8777 None:intergenic
TTCCCCTGGAAGTTTGTGGG+AGG 0.589656 tig0016225:-15367 Msa1358340:intron
GCCATAATTGAGAGAAACAG+AGG 0.590903 tig0016225:+16428 None:intergenic
GCTTGCAAATGCAGAAGTTG+TGG 0.591891 tig0016225:-10599 Msa1358340:CDS
AATCGAGAAGATGGTTATTG+CGG 0.592306 tig0016225:+16521 None:intergenic
TGTACAGAATAGCATTGCAA+TGG 0.595760 tig0016225:-13004 Msa1358340:intron
AACTCACTAACCCAATAAGC+CGG 0.596525 tig0016225:-8214 Msa1358340:three_prime_UTR
GCATTGCAGCTCACTATAGT+GGG 0.596921 tig0016225:-11374 Msa1358340:CDS
AAAGGCCCAACCCCAACGCA+CGG 0.597406 tig0016225:+11984 None:intergenic
GTACCTCCCACAAACTTCCA+GGG 0.597986 tig0016225:+15364 None:intergenic
TTAGGTTTAATGCAGGTCAA+CGG 0.603196 tig0016225:-10646 Msa1358340:intron
ACATACAGATCTAGGAATAG+GGG 0.604280 tig0016225:+11805 None:intergenic
GGAGGAAGATACGAGATCAC+GGG 0.606559 tig0016225:+15212 None:intergenic
TAGAAGGGCATTCCATCCAA+TGG 0.607450 tig0016225:-9158 Msa1358340:CDS
AGGAGGAAGATACGAGATCA+CGG 0.607622 tig0016225:+15211 None:intergenic
TATAAATGTCTGCGCTTCTG+CGG 0.609744 tig0016225:+8276 None:intergenic
GTGCATCATGTAAATTTGAA+GGG 0.610778 tig0016225:-9309 Msa1358340:CDS
TGGAAGTGCTTGGACACCCA+AGG 0.611288 tig0016225:-9355 Msa1358340:CDS
TAGATTAAGAATCTTCCTCA+AGG 0.612482 tig0016225:-10830 Msa1358340:CDS
AATGTTTCTGGCTATGACAG+AGG 0.612713 tig0016225:-14513 Msa1358340:CDS
TGTATTTACACCCAGTGGAG+AGG 0.615293 tig0016225:-10985 Msa1358340:intron
ACTAACTCCAGTTCTTTAGG+AGG 0.618244 tig0016225:+15194 None:intergenic
ATCCCAAGCAACTTTGCCAA+AGG 0.618298 tig0016225:+12961 None:intergenic
CCTCGTGGCACAATATAGAA+GGG 0.619462 tig0016225:-9173 Msa1358340:CDS
AAAGGGGACATGATGCTGCA+GGG 0.620819 tig0016225:-9285 Msa1358340:CDS
AAACTCGCTGGCAACGTCCG+AGG 0.623661 tig0016225:+15389 None:intergenic
GAAAATATTATTGAACGGTG+TGG 0.624304 tig0016225:-9424 Msa1358340:CDS
TCCACTGTTACCTCTCCACT+GGG 0.626056 tig0016225:+10975 None:intergenic
GGCTCAATGCTATTAGAGAG+TGG 0.627954 tig0016225:-11088 Msa1358340:CDS
AGATTTGCTATCATGTTCTG+GGG 0.632012 tig0016225:-11847 Msa1358340:CDS
ACAGTGCGTCACATTGTGGA+AGG 0.639089 tig0016225:-14742 Msa1358340:CDS
CCATGAATGATAGGTTATGG+AGG 0.640323 tig0016225:+16472 None:intergenic
TTCTGTAGTGATATCAGCAG+CGG 0.640815 tig0016225:+9536 None:intergenic
TGCTACAGTGCGTCACATTG+TGG 0.642347 tig0016225:-14746 Msa1358340:CDS
CTTTCTCAGTGATTCTGACG+GGG 0.642676 tig0016225:-9502 Msa1358340:CDS
TGTAAATTTGAAGGGCAAAG+GGG 0.645718 tig0016225:-9301 Msa1358340:CDS
ACATACGGCTATGTCTGAAG+TGG 0.647289 tig0016225:+8792 None:intergenic
AAATCCTGAAGATTATGCAA+AGG 0.647444 tig0016225:-12692 Msa1358340:CDS
ATAAAGTGCTTGGTATAATG+AGG 0.648471 tig0016225:-8023 Msa1358340:three_prime_UTR
AGTAGCTCCAAACATAAAAG+GGG 0.650201 tig0016225:-9447 Msa1358340:CDS
CCCTTCTATATTGTGCCACG+AGG 0.652703 tig0016225:+9173 None:intergenic
TCTAGCATTCAAGAACGCCA+TGG 0.653651 tig0016225:+8381 None:intergenic
TCAATCACAGTAGCACCTTG+AGG 0.657313 tig0016225:+10815 None:intergenic
TCTAGAGTAGATCAAATACC+GGG 0.659498 tig0016225:-8452 Msa1358340:CDS
GTTGTATGCATAGACCGAAG+AGG 0.660812 tig0016225:-9129 Msa1358340:intron
TAGCCAGAAACATTTGCCGA+AGG 0.661863 tig0016225:+14522 None:intergenic
GACCAGGCTGAGGTTGATGG+CGG 0.663709 tig0016225:-8643 Msa1358340:intron
ACTTGGCGTCACACTTCACG+AGG 0.666144 tig0016225:-15481 Msa1358340:CDS
GTAGACCATCCCAAAACACC+CGG 0.672266 tig0016225:+8434 None:intergenic
TGTTCAAGATGTGAAAGCAG+AGG 0.675037 tig0016225:-14546 Msa1358340:CDS
TACCTCCCACAAACTTCCAG+GGG 0.676489 tig0016225:+15365 None:intergenic
ACTTGTGCAGCATTTACACA+AGG 0.677794 tig0016225:-8093 Msa1358340:three_prime_UTR
GTTTCTGGCTATGACAGAGG+AGG 0.682217 tig0016225:-14510 Msa1358340:intron
CATAGCCGTATGTTCTTGTG+TGG 0.682854 tig0016225:-8782 Msa1358340:intron
AAATGGATTTGATAGCTGAG+AGG 0.682911 tig0016225:-11398 Msa1358340:CDS
CCAACTAGGTGTCAAAGCTG+GGG 0.684172 tig0016225:-14598 Msa1358340:intron
CCAAGCCTGATGGAAAACCA+TGG 0.686242 tig0016225:-8398 Msa1358340:CDS
TCAACCGGATGAATGATGAA+GGG 0.689425 tig0016225:+14992 None:intergenic
GTAGCTCCAAACATAAAAGG+GGG 0.697648 tig0016225:-9446 Msa1358340:CDS
GTTGGAAGTGCAGTGCCCAG+TGG 0.700189 tig0016225:-11330 Msa1358340:CDS
GGTTGCAACATGCTAAAACA+CGG 0.702738 tig0016225:-9727 Msa1358340:CDS
AATGTATGCAATTCTTGGAG+AGG 0.707152 tig0016225:-16091 Msa1358340:CDS
TTGGCATTTAAAGCTCACGA+TGG 0.719107 tig0016225:-15037 Msa1358340:CDS
CTTGGCGTCACACTTCACGA+GGG 0.722443 tig0016225:-15480 Msa1358340:CDS
ATGGATTTGATAGCTGAGAG+GGG 0.725531 tig0016225:-11396 Msa1358340:CDS
TGTATGCAATTCTTGGAGAG+GGG 0.729175 tig0016225:-16089 Msa1358340:CDS
GATGGTCAGAAAAGACGCAG+CGG 0.742743 tig0016225:-15019 Msa1358340:CDS
AAGCCCATAAAATTGCCTCG+TGG 0.756087 tig0016225:-9188 Msa1358340:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TACAATATATTTTTTTGTAT+AGG - tig0016225:8779-8798 Msa1358340:intron 10.0%
!!! ATCCTATTATTATTAATTTT+AGG + tig0016225:10684-10703 None:intergenic 10.0%
!! TTTGATATATAATCAAAATA+TGG - tig0016225:11114-11133 Msa1358340:intron 10.0%
!! TCTAAATAATATAAAAATAG+AGG - tig0016225:11154-11173 Msa1358340:intron 10.0%
!! TTTGAACAAAAAAAAAATAT+AGG + tig0016225:11972-11991 None:intergenic 10.0%
!! AAATAAATAATAAATAGAAG+AGG + tig0016225:13134-13153 None:intergenic 10.0%
!! AAAAATACTTTCATAATATT+CGG + tig0016225:14463-14482 None:intergenic 10.0%
!!! TTTACATAAATTTTCATAAA+TGG - tig0016225:14707-14726 Msa1358340:intron 10.0%
!!! TATATATAACAAACTTTTTT+TGG + tig0016225:14963-14982 None:intergenic 10.0%
!! GAAAAAAATATTGAAACAAT+TGG + tig0016225:8207-8226 None:intergenic 15.0%
!! AAAAACTTACAAAATTAAAC+TGG + tig0016225:8641-8660 None:intergenic 15.0%
!!! TATTGTCATTGTTATTAATT+AGG - tig0016225:8997-9016 Msa1358340:intron 15.0%
!! TCATTAATAAATTACAATCA+AGG + tig0016225:9877-9896 None:intergenic 15.0%
!! AATTTCAAAATTTAATACAC+CGG + tig0016225:10149-10168 None:intergenic 15.0%
!! TGCCTAAAATTAATAATAAT+AGG - tig0016225:10679-10698 Msa1358340:intron 15.0%
!! AATAGGATATTATTGTATAT+AGG - tig0016225:10696-10715 Msa1358340:intron 15.0%
!!! ATATATGAATCATAGTTTTA+AGG + tig0016225:11295-11314 None:intergenic 15.0%
!! ATTAAGTTAGAAAACAATTT+AGG + tig0016225:11541-11560 None:intergenic 15.0%
!!! CTATTTAGAATACATAATAT+TGG - tig0016225:12804-12823 Msa1358340:intron 15.0%
!! TTCTTAATCTACATAAAATA+CGG + tig0016225:13732-13751 None:intergenic 15.0%
!! TAATTAAAATGTGAAAAAGT+GGG + tig0016225:14160-14179 None:intergenic 15.0%
!!! TTGTGTTTATTTTCTTTATT+TGG - tig0016225:14601-14620 Msa1358340:intron 15.0%
!! ATTTATGTAAATAATAAAGC+TGG + tig0016225:14698-14717 None:intergenic 15.0%
!! ACTCTCATAATTATAATAAT+AGG - tig0016225:15548-15567 Msa1358340:intron 15.0%
!!! ACATTTATATGTCTAAATTT+TGG - tig0016225:16309-16328 Msa1358340:intron 15.0%
!! TATGTATATAAAAGAAGAAA+TGG + tig0016225:16634-16653 None:intergenic 15.0%
!!! AATTTTAGTTTATTGAAATG+CGG - tig0016225:16653-16672 Msa1358340:five_prime_UTR 15.0%
!!! TTTTTTTTTTGCAGTTTCTT+TGG - tig0016225:8449-8468 Msa1358340:CDS 20.0%
!! TTCAACAAAAAATATTGATG+AGG + tig0016225:8597-8616 None:intergenic 20.0%
!!! CATCAATATTTTTTGTTGAA+TGG - tig0016225:8597-8616 Msa1358340:CDS 20.0%
!! TCAATATCAATATTGCAAAT+TGG - tig0016225:9020-9039 Msa1358340:intron 20.0%
!! CAATCTTAATATACTTGTTT+CGG - tig0016225:9439-9458 Msa1358340:CDS 20.0%
!! AAAACAGAAACAAAACAAAA+AGG + tig0016225:9497-9516 None:intergenic 20.0%
!! AATGTATAAGCAAATGAATA+TGG + tig0016225:9930-9949 None:intergenic 20.0%
!! ATTTCAAAATTTAATACACC+GGG + tig0016225:10148-10167 None:intergenic 20.0%
!!! GGTGTATTAAATTTTGAAAT+TGG - tig0016225:10148-10167 Msa1358340:intron 20.0%
!!! TATTAAATTTTGAAATTGGC+TGG - tig0016225:10152-10171 Msa1358340:intron 20.0%
!!! ATTAAATTTTGAAATTGGCT+GGG - tig0016225:10153-10172 Msa1358340:intron 20.0%
!!! ATTTTGCCTTAACTTTAATA+GGG + tig0016225:10360-10379 None:intergenic 20.0%
!!! AATTTTGCCTTAACTTTAAT+AGG + tig0016225:10361-10380 None:intergenic 20.0%
!!! ATTTTCAAGATTCAAATCTA+TGG - tig0016225:10474-10493 Msa1358340:intron 20.0%
!! CTTAAATTGCTATAATTAGT+TGG + tig0016225:10846-10865 None:intergenic 20.0%
!!! TAATTTTACAGTTTGAATCA+AGG - tig0016225:10921-10940 Msa1358340:intron 20.0%
!! GATATATAATCAAAATATGG+AGG - tig0016225:11117-11136 Msa1358340:intron 20.0%
!! TATGATTCATATATCCATTT+AGG - tig0016225:11301-11320 Msa1358340:CDS 20.0%
!!! AAAAAGTATAATAATGAAGC+AGG + tig0016225:11816-11835 None:intergenic 20.0%
!! AACAAAAAAAAAATATAGGC+CGG + tig0016225:11968-11987 None:intergenic 20.0%
!!! ATATTCGATTTACTTTTTGT+AGG - tig0016225:12882-12901 Msa1358340:intron 20.0%
!! CATCATTAAAATAGACTAAT+AGG + tig0016225:13385-13404 None:intergenic 20.0%
!! TGTAATATTATTGACACATT+AGG - tig0016225:13907-13926 Msa1358340:intron 20.0%
!! GTAATTAAAATGTGAAAAAG+TGG + tig0016225:14161-14180 None:intergenic 20.0%
!! GAGAGAGATATAAAATTAAT+AGG + tig0016225:14191-14210 None:intergenic 20.0%
!! AGGAAAATAGGTAATTAAAA+AGG - tig0016225:14223-14242 Msa1358340:intron 20.0%
!! GGAAAATAGGTAATTAAAAA+GGG - tig0016225:14224-14243 Msa1358340:intron 20.0%
!! GAAAATAGGTAATTAAAAAG+GGG - tig0016225:14225-14244 Msa1358340:intron 20.0%
!! AAAATAGGTAATTAAAAAGG+GGG - tig0016225:14226-14245 Msa1358340:intron 20.0%
!! ATCAGTTATTCATATCATTA+AGG - tig0016225:14550-14569 Msa1358340:CDS 20.0%
!! AGTAAATATTATGCTAGTAT+AGG - tig0016225:14663-14682 Msa1358340:intron 20.0%
!! GTAAATATTATGCTAGTATA+GGG - tig0016225:14664-14683 Msa1358340:intron 20.0%
!!! ATATTTTTTGTAGTTTCTGA+AGG - tig0016225:14997-15016 Msa1358340:CDS 20.0%
!!! ATTGTTAACTTGAATCATAT+TGG + tig0016225:15323-15342 None:intergenic 20.0%
!!! AAACATATATTTTACTAGCA+TGG + tig0016225:15484-15503 None:intergenic 20.0%
!! AACTTGTAAACAATTATTTC+AGG - tig0016225:15727-15746 Msa1358340:intron 20.0%
!!! ATTTTACTGTACTCAAATAT+AGG - tig0016225:15838-15857 Msa1358340:intron 20.0%
!! TGAAGGAAATTTAGAAAATT+TGG - tig0016225:15981-16000 Msa1358340:CDS 20.0%
!!! ACAAAAATTATTTGTTTCTC+AGG - tig0016225:16085-16104 Msa1358340:CDS 20.0%
!!! GAACTTTTTACAAGTAAAAA+AGG + tig0016225:16612-16631 None:intergenic 20.0%
! AAATATTGAAACAATTGGAG+AGG + tig0016225:8202-8221 None:intergenic 25.0%
! ATTTGATACGCAACATTAAT+CGG - tig0016225:8297-8316 Msa1358340:three_prime_UTR 25.0%
! TTCGTCTTAATACAAACATA+AGG + tig0016225:8932-8951 None:intergenic 25.0%
! GTATTAAGACGAATTTGATT+AGG - tig0016225:8939-8958 Msa1358340:intron 25.0%
!! TTGATTATAGTTCTGCAAAT+GGG - tig0016225:9273-9292 Msa1358340:CDS 25.0%
! TTATATCATCTAATTGCATC+AGG - tig0016225:9328-9347 Msa1358340:CDS 25.0%
! ATGAAACGTAATTTAATCGT+TGG - tig0016225:9893-9912 Msa1358340:intron 25.0%
!! AAGCAACTTTTACATAAAAG+AGG + tig0016225:10090-10109 None:intergenic 25.0%
! GTTACCTGAAATTAAGTTAA+GGG + tig0016225:10394-10413 None:intergenic 25.0%
! GTGACATGAAAAAAAGATAA+AGG + tig0016225:10425-10444 None:intergenic 25.0%
! CCATATGCAAATTGATAAAA+AGG + tig0016225:10454-10473 None:intergenic 25.0%
!! CCTTTTTATCAATTTGCATA+TGG - tig0016225:10451-10470 Msa1358340:intron 25.0%
! ATGACGTGAAAAAAAGATAA+AGG - tig0016225:10609-10628 Msa1358340:CDS 25.0%
!! GTTATCTGAAATTAAGTCAA+GGG - tig0016225:10640-10659 Msa1358340:intron 25.0%
! ACTTGATTAATAAAATGCAG+TGG - tig0016225:10889-10908 Msa1358340:intron 25.0%
!!! AATAAAAGAGTATCTCTCAA+TGG + tig0016225:10963-10982 None:intergenic 25.0%
!!! TGAGAGATACTCTTTTATTT+AGG - tig0016225:10964-10983 Msa1358340:intron 25.0%
! CATTGAAGATTAATAACAAG+TGG + tig0016225:11327-11346 None:intergenic 25.0%
!!! CACTTGTTATTAATCTTCAA+TGG - tig0016225:11325-11344 Msa1358340:CDS 25.0%
! CTTCATGATATAAATACCAA+AGG + tig0016225:11447-11466 None:intergenic 25.0%
! TAATAACTGAACATATAGAG+AGG + tig0016225:12028-12047 None:intergenic 25.0%
!!! CAGTTATTAAACCTTTTTTC+CGG - tig0016225:12039-12058 Msa1358340:intron 25.0%
!!! AGTTATTAAACCTTTTTTCC+GGG - tig0016225:12040-12059 Msa1358340:intron 25.0%
! AATAAACAAAATGGTTGCAT+TGG + tig0016225:12243-12262 None:intergenic 25.0%
! GAACATGTGAATAAACAAAA+TGG + tig0016225:12252-12271 None:intergenic 25.0%
!!! TACTTTATTTTGGACTTTTG+AGG - tig0016225:12324-12343 Msa1358340:intron 25.0%
! GAAAAATCATATGTCACTAT+GGG + tig0016225:12640-12659 None:intergenic 25.0%
! AGAAAAATCATATGTCACTA+TGG + tig0016225:12641-12660 None:intergenic 25.0%
! AACAAAATACATACAGATCT+AGG + tig0016225:12777-12796 None:intergenic 25.0%
! AACATACTCTCATACAAAAA+TGG + tig0016225:12970-12989 None:intergenic 25.0%
! AAATACAGGTAGTCTTTATT+TGG - tig0016225:12998-13017 Msa1358340:CDS 25.0%
!!! ATTTTGAGATGAACTTCATT+TGG + tig0016225:13092-13111 None:intergenic 25.0%
!! AGCATCAAGATCTTAATTTT+TGG + tig0016225:13433-13452 None:intergenic 25.0%
! CTTAATTATCTAACGCAATT+TGG + tig0016225:13655-13674 None:intergenic 25.0%
! TATATGATACACACTGAAAT+TGG - tig0016225:13786-13805 Msa1358340:intron 25.0%
! TTGCTACTAAATAGGAAAAT+AGG - tig0016225:14211-14230 Msa1358340:intron 25.0%
!! TTTATTTCTTATCATGTGCA+AGG - tig0016225:14269-14288 Msa1358340:intron 25.0%
!! AAACACAAATCTAATTTGCA+AGG - tig0016225:14307-14326 Msa1358340:intron 25.0%
!! ATCTGAAACTTAATAACAGT+AGG + tig0016225:14364-14383 None:intergenic 25.0%
!!! TAGAAGTCTTATTTTGTTAG+TGG - tig0016225:14627-14646 Msa1358340:intron 25.0%
! TATCATGTTAGTATATCCAA+CGG - tig0016225:15581-15600 Msa1358340:intron 25.0%
! ATTCCATCTAGTAATTAAAC+TGG - tig0016225:15671-15690 Msa1358340:intron 25.0%
! TAACCAGTTTAATTACTAGA+TGG + tig0016225:15677-15696 None:intergenic 25.0%
! AGTAGATTATTTCACTATCT+TGG - tig0016225:15699-15718 Msa1358340:intron 25.0%
! TTGAGTACAGTAAAATTTCT+GGG + tig0016225:15834-15853 None:intergenic 25.0%
! TTTGAGTACAGTAAAATTTC+TGG + tig0016225:15835-15854 None:intergenic 25.0%
!! ATCCACGTACTAATTTATTT+TGG - tig0016225:15878-15897 Msa1358340:intron 25.0%
!!! GTTATGTTATTTCAAGTTGA+AGG - tig0016225:15964-15983 Msa1358340:CDS 25.0%
! TGTATATAGAAAAGAGTGAT+AGG - tig0016225:16431-16450 Msa1358340:exon 25.0%
!! GTTTGTTATCTGTCTTTCTT+TGG - tig0016225:7953-7972 Msa1358340:three_prime_UTR 30.0%
ATTCCATGAATGATAGGTTA+TGG + tig0016225:8105-8124 None:intergenic 30.0%
GATTGAATTCCATGAATGAT+AGG + tig0016225:8111-8130 None:intergenic 30.0%
! TTTTTGTTGAATGGTCGAAA+TGG - tig0016225:8606-8625 Msa1358340:CDS 30.0%
ACTAACTAACATCGTGAAAT+AGG + tig0016225:8691-8710 None:intergenic 30.0%
TATTAGAGAAGCTGAAAAGT+TGG - tig0016225:8743-8762 Msa1358340:intron 30.0%
ATTAGAGAAGCTGAAAAGTT+GGG - tig0016225:8744-8763 Msa1358340:intron 30.0%
!!! TAGTGTTTAGACTAGTTTTC+AGG - tig0016225:8813-8832 Msa1358340:CDS 30.0%
!!! AGTGTTTAGACTAGTTTTCA+GGG - tig0016225:8814-8833 Msa1358340:CDS 30.0%
TATCAATATTGCAAATTGGC+AGG - tig0016225:9024-9043 Msa1358340:intron 30.0%
! TGTGAAGCTTTTAGTATAGT+AGG - tig0016225:9049-9068 Msa1358340:intron 30.0%
! GTTGATTATAGTTCTGCAAA+TGG - tig0016225:9272-9291 Msa1358340:CDS 30.0%
! TGATTATAGTTCTGCAAATG+GGG - tig0016225:9274-9293 Msa1358340:CDS 30.0%
! GTTAGTCCATAATGCTTTTA+CGG - tig0016225:9394-9413 Msa1358340:CDS 30.0%
ATATTAAGATTGCTTTCACG+AGG + tig0016225:9431-9450 None:intergenic 30.0%
!!! TTTTGTTTCTGTTTTGTTCC+TGG - tig0016225:9502-9521 Msa1358340:CDS 30.0%
!! TATCGACAATTTTTCAGAAG+AGG + tig0016225:9651-9670 None:intergenic 30.0%
!! AATTTAATCGTTGGTAGCTT+TGG - tig0016225:9902-9921 Msa1358340:intron 30.0%
AAAAATTACTTGTCTCTTCC+CGG - tig0016225:10127-10146 Msa1358340:intron 30.0%
ATGGAAATTACCTGTTTATG+TGG + tig0016225:10269-10288 None:intergenic 30.0%
CAGTAGGTTATTCAAATCAA+TGG + tig0016225:10288-10307 None:intergenic 30.0%
!! CATTGATTTGAATAACCTAC+TGG - tig0016225:10286-10305 Msa1358340:intron 30.0%
! ACTCTTCATCATTCTTTTTG+AGG - tig0016225:10311-10330 Msa1358340:intron 30.0%
! CCTCATCTAAATTTTCACTT+AGG + tig0016225:10337-10356 None:intergenic 30.0%
CCTAAGTGAAAATTTAGATG+AGG - tig0016225:10334-10353 Msa1358340:intron 30.0%
TCATCCCTTAACTTAATTTC+AGG - tig0016225:10387-10406 Msa1358340:intron 30.0%
CGTTACCTGAAATTAAGTTA+AGG + tig0016225:10395-10414 None:intergenic 30.0%
TCATATGAAAACATGAGTGA+AGG + tig0016225:10536-10555 None:intergenic 30.0%
CTTGAAAATCCATATGCAAA+CGG - tig0016225:10571-10590 Msa1358340:intron 30.0%
! CGTTATCTGAAATTAAGTCA+AGG - tig0016225:10639-10658 Msa1358340:intron 30.0%
CAAATAAGTGATTAGTGTGT+GGG - tig0016225:11088-11107 Msa1358340:CDS 30.0%
ATATGGAGGACTAAATTTAG+AGG - tig0016225:11131-11150 Msa1358340:intron 30.0%
TTAATAACAAGTGGCCTAAA+TGG + tig0016225:11318-11337 None:intergenic 30.0%
ATTGCGTTCTGTTATTATCA+CGG - tig0016225:11378-11397 Msa1358340:CDS 30.0%
TAGAAAACAATTTAGGAGCT+AGG + tig0016225:11534-11553 None:intergenic 30.0%
GGATGTATCAAATTAAGGTA+TGG - tig0016225:11629-11648 Msa1358340:CDS 30.0%
GTATATTTACATAGTTGCCA+AGG - tig0016225:11651-11670 Msa1358340:CDS 30.0%
! TGAGTTCTAGTCTATTTATG+TGG + tig0016225:11720-11739 None:intergenic 30.0%
AAATCCTGAAGATTATGCAA+AGG - tig0016225:11879-11898 Msa1358340:intron 30.0%
CTTTCTCATGTTCTTTGAAT+AGG + tig0016225:11924-11943 None:intergenic 30.0%
! ACATGAGAAAGATCTTTTAG+AGG - tig0016225:11933-11952 Msa1358340:intron 30.0%
GAAGATATAAGTTTAGTCAC+TGG + tig0016225:12086-12105 None:intergenic 30.0%
TATCTTCTCCATTTCTTGAT+AGG - tig0016225:12099-12118 Msa1358340:intron 30.0%
AGACCTTATGACAGTTAAAA+CGG - tig0016225:12165-12184 Msa1358340:CDS 30.0%
GTTTATTCACATGTTCATGT+TGG - tig0016225:12256-12275 Msa1358340:intron 30.0%
!! TACTCGTGCATACTTTATTT+TGG - tig0016225:12314-12333 Msa1358340:intron 30.0%
TTGATATACCAAGTAAAAGG+TGG + tig0016225:12673-12692 None:intergenic 30.0%
CCTTTGATATACCAAGTAAA+AGG + tig0016225:12676-12695 None:intergenic 30.0%
! CCTTTTACTTGGTATATCAA+AGG - tig0016225:12673-12692 Msa1358340:CDS 30.0%
AAACATGAAAAATGAGAGCA+AGG + tig0016225:12699-12718 None:intergenic 30.0%
TACATACAGATCTAGGAATA+GGG + tig0016225:12770-12789 None:intergenic 30.0%
ATACATACAGATCTAGGAAT+AGG + tig0016225:12771-12790 None:intergenic 30.0%
! CGAAACATATTTTCTTTGAC+TGG - tig0016225:12834-12853 Msa1358340:intron 30.0%
!!! GATTTACTTTTTGTAGGTGA+AGG - tig0016225:12888-12907 Msa1358340:intron 30.0%
! TTTTGTACCCATTAGGTTTA+GGG + tig0016225:12927-12946 None:intergenic 30.0%
!! TTTTGTATGAGAGTATGTTC+AGG - tig0016225:12971-12990 Msa1358340:CDS 30.0%
!! AACTTCATTTGGATTAGCTA+GGG + tig0016225:13081-13100 None:intergenic 30.0%
AAGAGGATGATAAACTCATT+AGG + tig0016225:13117-13136 None:intergenic 30.0%
GTAGATTAGAACAGAAGAAA+TGG - tig0016225:13156-13175 Msa1358340:intron 30.0%
!! AGACGGTATTATTTCTGATA+CGG + tig0016225:13682-13701 None:intergenic 30.0%
TAGATTAAGAATCTTCCTCA+AGG - tig0016225:13741-13760 Msa1358340:intron 30.0%
ATTCCATCAGTACAAAAATG+GGG + tig0016225:13838-13857 None:intergenic 30.0%
GATTCCATCAGTACAAAAAT+GGG + tig0016225:13839-13858 None:intergenic 30.0%
TGATTCCATCAGTACAAAAA+TGG + tig0016225:13840-13859 None:intergenic 30.0%
CTCCAAATAGAAAACATACT+GGG + tig0016225:14034-14053 None:intergenic 30.0%
ACTCCAAATAGAAAACATAC+TGG + tig0016225:14035-14054 None:intergenic 30.0%
!! ATGTTTTCTATTTGGAGTGA+TGG - tig0016225:14037-14056 Msa1358340:intron 30.0%
TAATAATCCATATGTGTGCA+AGG + tig0016225:14133-14152 None:intergenic 30.0%
TAATTAAAAAGGGGGAAAAG+TGG - tig0016225:14234-14253 Msa1358340:intron 30.0%
AATTAAAAAGGGGGAAAAGT+GGG - tig0016225:14235-14254 Msa1358340:intron 30.0%
! TAAGCGCACATCAAATATTT+TGG - tig0016225:14392-14411 Msa1358340:intron 30.0%
! AAGCGCACATCAAATATTTT+GGG - tig0016225:14393-14412 Msa1358340:intron 30.0%
!! AGCATCTTTAGAATGTATTG+TGG - tig0016225:14526-14545 Msa1358340:CDS 30.0%
!!! TCTTATTTTGTTAGTGGCTT+AGG - tig0016225:14633-14652 Msa1358340:intron 30.0%
ATATTCACCTTTCACTTCAT+TGG - tig0016225:14756-14775 Msa1358340:CDS 30.0%
TCATAATTAACTTCGTTACC+AGG - tig0016225:14782-14801 Msa1358340:CDS 30.0%
TGCAAGACACAAAATAATGA+AGG - tig0016225:14869-14888 Msa1358340:intron 30.0%
AGACACAAAATAATGAAGGT+AGG - tig0016225:14873-14892 Msa1358340:intron 30.0%
GAATCTGAAAAACTGTCAAA+TGG - tig0016225:15097-15116 Msa1358340:intron 30.0%
! TATTTTCCCCCTTTTATGTT+TGG + tig0016225:15134-15153 None:intergenic 30.0%
AGGGGGAAAATATTATTGAA+CGG - tig0016225:15142-15161 Msa1358340:intron 30.0%
GAAAATATTATTGAACGGTG+TGG - tig0016225:15147-15166 Msa1358340:intron 30.0%
GTGCATCATGTAAATTTGAA+GGG - tig0016225:15262-15281 Msa1358340:intron 30.0%
ATGTAAATTTGAAGGGCAAA+GGG - tig0016225:15269-15288 Msa1358340:intron 30.0%
! AATATATGTTTTGCACCATG+TGG - tig0016225:15493-15512 Msa1358340:CDS 30.0%
ATCATGTTAGTATATCCAAC+GGG - tig0016225:15582-15601 Msa1358340:intron 30.0%
AACAATTATTTCAGGCATGA+TGG - tig0016225:15735-15754 Msa1358340:intron 30.0%
TGAGTACAGTAAAATTTCTG+GGG + tig0016225:15833-15852 None:intergenic 30.0%
CAAATATAGGATGATGTCTT+TGG - tig0016225:15851-15870 Msa1358340:intron 30.0%
TGCCAAAATAAATTAGTACG+TGG + tig0016225:15883-15902 None:intergenic 30.0%
ATTAAGAATCAAGCATAACC+AGG + tig0016225:16025-16044 None:intergenic 30.0%
TGTTTCATTGAATGTGTTCA+TGG - tig0016225:16055-16074 Msa1358340:CDS 30.0%
TTCTTGAATGCTAGATGATT+TGG - tig0016225:16198-16217 Msa1358340:intron 30.0%
!!! GTTTTGAGTTTCTGAAACTT+TGG + tig0016225:16402-16421 None:intergenic 30.0%
TTTCAGAAACTCAAAACTGA+AGG - tig0016225:16405-16424 Msa1358340:intron 30.0%
AGAAAAGAGTGATAGGATAA+AGG - tig0016225:16438-16457 Msa1358340:five_prime_UTR 30.0%
! ATAAAGTGCTTGGTATAATG+AGG - tig0016225:16548-16567 Msa1358340:five_prime_UTR 30.0%
TTTATTGAAATGCGGATTCT+GGG - tig0016225:16661-16680 Msa1358340:five_prime_UTR 30.0%
AATCGAGAAGATGGTTATTG+CGG + tig0016225:8053-8072 None:intergenic 35.0%
! TCCTCTGTTTCTCTCAATTA+TGG - tig0016225:8142-8161 Msa1358340:three_prime_UTR 35.0%
!! GTTTTAGTACCTGACATGAA+AGG + tig0016225:8176-8195 None:intergenic 35.0%
GCGAAAATGTTACTAGTGTT+TGG - tig0016225:8399-8418 Msa1358340:CDS 35.0%
GTGTGAATGTATGCAATTCT+TGG - tig0016225:8475-8494 Msa1358340:intron 35.0%
AATGTATGCAATTCTTGGAG+AGG - tig0016225:8480-8499 Msa1358340:intron 35.0%
ATGTATGCAATTCTTGGAGA+GGG - tig0016225:8481-8500 Msa1358340:intron 35.0%
! GTAAGTTTTTGTAGTTCCCT+TGG - tig0016225:8651-8670 Msa1358340:intron 35.0%
! AGTTCTAACCAATAGGTCAA+GGG + tig0016225:8846-8865 None:intergenic 35.0%
! AAGTTCTAACCAATAGGTCA+AGG + tig0016225:8847-8866 None:intergenic 35.0%
CTAGATTTGCATCTAGAGAA+TGG - tig0016225:9134-9153 Msa1358340:CDS 35.0%
!!! TTGTTCTTCGGTTTTTTCCT+CGG - tig0016225:9165-9184 Msa1358340:CDS 35.0%
!! AGCTTACCGTAAAAGCATTA+TGG + tig0016225:9403-9422 None:intergenic 35.0%
! ATAATGCTTTTACGGTAAGC+TGG - tig0016225:9402-9421 Msa1358340:CDS 35.0%
ATTTGTCCAGGAACTTGATT+GGG - tig0016225:9720-9739 Msa1358340:CDS 35.0%
TTACATTATCGATCCCAACT+AGG - tig0016225:9959-9978 Msa1358340:intron 35.0%
ACTAAAGAATTTGTCACTGC+AGG - tig0016225:10178-10197 Msa1358340:intron 35.0%
TTATCGTCAAATTAGCAGAC+AGG - tig0016225:10210-10229 Msa1358340:intron 35.0%
GAAATTACCTGTTTATGTGG+AGG + tig0016225:10266-10285 None:intergenic 35.0%
ATGAGGCCCTATTAAAGTTA+AGG - tig0016225:10351-10370 Msa1358340:intron 35.0%
!!! TCACGTCATTTTTGTCCTTT+TGG + tig0016225:10598-10617 None:intergenic 35.0%
! CTCACTTTGCTCTTTTTGTA+AGG + tig0016225:11001-11020 None:intergenic 35.0%
AAGAGCAAAGTGAGATATGT+TGG - tig0016225:11007-11026 Msa1358340:CDS 35.0%
TGTTACTAAGTTCTTCGTCA+CGG + tig0016225:11041-11060 None:intergenic 35.0%
CCACACACTAATCACTTATT+TGG + tig0016225:11090-11109 None:intergenic 35.0%
CCAAATAAGTGATTAGTGTG+TGG - tig0016225:11087-11106 Msa1358340:CDS 35.0%
TTGCGTTCTGTTATTATCAC+GGG - tig0016225:11379-11398 Msa1358340:CDS 35.0%
AAAGGCTCATTCAGTACTTT+CGG + tig0016225:11429-11448 None:intergenic 35.0%
TGTACAGAATAGCATTGCAA+TGG - tig0016225:11567-11586 Msa1358340:intron 35.0%
ATTACAGGTATTTGCTCCTT+TGG - tig0016225:11594-11613 Msa1358340:CDS 35.0%
GCTTGGGATGTATCAAATTA+AGG - tig0016225:11624-11643 Msa1358340:CDS 35.0%
!! AGTCTATTTATGTGGACTAG+TGG + tig0016225:11712-11731 None:intergenic 35.0%
ACTTGTATTTCATGACACGA+AGG - tig0016225:11776-11795 Msa1358340:intron 35.0%
TTCACCTTTGCATAATCTTC+AGG + tig0016225:11886-11905 None:intergenic 35.0%
CTCATGTTCTTTGAATAGGT+CGG + tig0016225:11920-11939 None:intergenic 35.0%
!! AGATCTTTTAGAGGTAGTAC+TGG - tig0016225:11942-11961 Msa1358340:intron 35.0%
TTTGTTCGCCTATCAAGAAA+TGG + tig0016225:12110-12129 None:intergenic 35.0%
GGTCTAAGAATTGATCATCT+TGG + tig0016225:12150-12169 None:intergenic 35.0%
!!! CTTCCGTTTTAACTGTCATA+AGG + tig0016225:12171-12190 None:intergenic 35.0%
TGAGATTAACCAAATTGCAC+AGG - tig0016225:12439-12458 Msa1358340:CDS 35.0%
! GCTTTGATTTCTACGTTGAA+AGG - tig0016225:12465-12484 Msa1358340:intron 35.0%
!! CAGATTTGCTATCATGTTCT+GGG - tig0016225:12723-12742 Msa1358340:CDS 35.0%
!! AGATTTGCTATCATGTTCTG+GGG - tig0016225:12724-12743 Msa1358340:CDS 35.0%
ACATACAGATCTAGGAATAG+GGG + tig0016225:12769-12788 None:intergenic 35.0%
TTTGTACCCATTAGGTTTAG+GGG + tig0016225:12926-12945 None:intergenic 35.0%
! CTTTTGTACCCATTAGGTTT+AGG + tig0016225:12928-12947 None:intergenic 35.0%
! TGAAGACTTTTGTACCCATT+AGG + tig0016225:12934-12953 None:intergenic 35.0%
TATGTTCAGGCTTGAAATAC+AGG - tig0016225:12984-13003 Msa1358340:CDS 35.0%
! TCCACATTCCATTTTCTTCA+AGG - tig0016225:13041-13060 Msa1358340:intron 35.0%
! CCACATTCCATTTTCTTCAA+GGG - tig0016225:13042-13061 Msa1358340:intron 35.0%
! CACATTCCATTTTCTTCAAG+GGG - tig0016225:13043-13062 Msa1358340:intron 35.0%
!! GAACTTCATTTGGATTAGCT+AGG + tig0016225:13082-13101 None:intergenic 35.0%
! AAATGGATTTGATAGCTGAG+AGG - tig0016225:13173-13192 Msa1358340:intron 35.0%
! AATGGATTTGATAGCTGAGA+GGG - tig0016225:13174-13193 Msa1358340:intron 35.0%
ACTGTTACAAGAGATCTTCT+GGG - tig0016225:13551-13570 Msa1358340:intron 35.0%
GGATTATGTCATATACTACG+TGG - tig0016225:13616-13635 Msa1358340:intron 35.0%
TATCTAACGCAATTTGGATG+AGG + tig0016225:13649-13668 None:intergenic 35.0%
!! GACGGTATTATTTCTGATAC+GGG + tig0016225:13681-13700 None:intergenic 35.0%
!! TATCCCCATTTTTGTACTGA+TGG - tig0016225:13832-13851 Msa1358340:intron 35.0%
TGACACATTAGGTTTAATGC+AGG - tig0016225:13918-13937 Msa1358340:intron 35.0%
TTAGGTTTAATGCAGGTCAA+CGG - tig0016225:13925-13944 Msa1358340:intron 35.0%
AATAGAAAACATACTGGGTG+AGG + tig0016225:14029-14048 None:intergenic 35.0%
! CACCCAGTATGTTTTCTATT+TGG - tig0016225:14029-14048 Msa1358340:intron 35.0%
TCTCTCTCTTGCTACTAAAT+AGG - tig0016225:14203-14222 Msa1358340:intron 35.0%
ATCATTAAGGAAGCAATCGT+AGG - tig0016225:14563-14582 Msa1358340:CDS 35.0%
! CTAGCAAATCAGCTTTTCAA+AGG - tig0016225:14811-14830 Msa1358340:CDS 35.0%
AACATAAACTTCGTCTGAGT+TGG + tig0016225:14927-14946 None:intergenic 35.0%
CAGTAGCTCCAAACATAAAA+GGG - tig0016225:15123-15142 Msa1358340:intron 35.0%
AGTAGCTCCAAACATAAAAG+GGG - tig0016225:15124-15143 Msa1358340:intron 35.0%
! TTGTGTTTTCCATTGACCTT+GGG + tig0016225:15235-15254 None:intergenic 35.0%
! ATTGTGTTTTCCATTGACCT+TGG + tig0016225:15236-15255 None:intergenic 35.0%
CGTGCATCATGTAAATTTGA+AGG - tig0016225:15261-15280 Msa1358340:intron 35.0%
CATGTAAATTTGAAGGGCAA+AGG - tig0016225:15268-15287 Msa1358340:intron 35.0%
TGTAAATTTGAAGGGCAAAG+GGG - tig0016225:15270-15289 Msa1358340:intron 35.0%
! GGCAGGACTTCTTTATATTT+TGG + tig0016225:15346-15365 None:intergenic 35.0%
AAATATAAAGAAGTCCTGCC+AGG - tig0016225:15346-15365 Msa1358340:intron 35.0%
TACAACAGATAACCATTGGA+TGG + tig0016225:15428-15447 None:intergenic 35.0%
TGCATACAACAGATAACCAT+TGG + tig0016225:15432-15451 None:intergenic 35.0%
! TTTTACTAGCATGGATGATC+AGG + tig0016225:15475-15494 None:intergenic 35.0%
GAAGCCATCAAAAAGTTCAT+TGG + tig0016225:15519-15538 None:intergenic 35.0%
TAAGAGAGTGATTGAAGGAT+AGG - tig0016225:15605-15624 Msa1358340:intron 35.0%
! ATTTGACTTATCAAACGACC+AGG - tig0016225:15912-15931 Msa1358340:intron 35.0%
TACTGTATCATGTCTAATCC+TGG - tig0016225:16004-16023 Msa1358340:CDS 35.0%
!! CTCTAGAGTAGATCAAATAC+CGG - tig0016225:16118-16137 Msa1358340:intron 35.0%
! TCTAGAGTAGATCAAATACC+GGG - tig0016225:16119-16138 Msa1358340:intron 35.0%
CAGAACTGATCTGTAATCAT+TGG + tig0016225:16261-16280 None:intergenic 35.0%
CAATGATTACAGATCAGTTC+TGG - tig0016225:16259-16278 Msa1358340:intron 35.0%
TGCTTGGTATAATGAGGATA+GGG - tig0016225:16554-16573 Msa1358340:five_prime_UTR 35.0%
GTTTATTGAAATGCGGATTC+TGG - tig0016225:16660-16679 Msa1358340:five_prime_UTR 35.0%
ATGAGATATCCTGTTACGCT+CGG + tig0016225:7917-7936 None:intergenic 40.0%
GAAGATGGTTATTGCGGTTA+TGG + tig0016225:8047-8066 None:intergenic 40.0%
GAATCGGAAAATCGAGAAGA+TGG + tig0016225:8062-8081 None:intergenic 40.0%
GAAGGGGAAGAGAATTGAAT+CGG + tig0016225:8078-8097 None:intergenic 40.0%
TGATAGGTTATGGAGGAGAA+GGG + tig0016225:8095-8114 None:intergenic 40.0%
ATGATAGGTTATGGAGGAGA+AGG + tig0016225:8096-8115 None:intergenic 40.0%
CCATGAATGATAGGTTATGG+AGG + tig0016225:8102-8121 None:intergenic 40.0%
CCTCCATAACCTATCATTCA+TGG - tig0016225:8099-8118 Msa1358340:three_prime_UTR 40.0%
GCCATAATTGAGAGAAACAG+AGG + tig0016225:8146-8165 None:intergenic 40.0%
TGTATGCAATTCTTGGAGAG+GGG - tig0016225:8482-8501 Msa1358340:intron 40.0%
! GGGTCTAAGTTCTAACCAAT+AGG + tig0016225:8853-8872 None:intergenic 40.0%
! AGACCCCCTTTAGATTTGTT+CGG - tig0016225:8867-8886 Msa1358340:intron 40.0%
TGTGCCGAACAAATCTAAAG+GGG + tig0016225:8874-8893 None:intergenic 40.0%
GTGTGCCGAACAAATCTAAA+GGG + tig0016225:8875-8894 None:intergenic 40.0%
! TCATATTCCGACAAAGCACT+TGG - tig0016225:9073-9092 Msa1358340:intron 40.0%
! ATGGCAGTTGTCTTGTTCTT+CGG - tig0016225:9153-9172 Msa1358340:CDS 40.0%
TCTTGACCTTTACTGAACCT+TGG - tig0016225:9232-9251 Msa1358340:CDS 40.0%
TCTAATTGCATCAGGACCTT+AGG - tig0016225:9336-9355 Msa1358340:CDS 40.0%
GTATCTTCCTCCTAAAGAAC+TGG - tig0016225:9370-9389 Msa1358340:CDS 40.0%
ACTAACTCCAGTTCTTTAGG+AGG + tig0016225:9380-9399 None:intergenic 40.0%
TGGACTAACTCCAGTTCTTT+AGG + tig0016225:9383-9402 None:intergenic 40.0%
TTGTTCCTGGTTGTTACAGT+TGG - tig0016225:9515-9534 Msa1358340:CDS 40.0%
AAATGCCAACTGTAACAACC+AGG + tig0016225:9523-9542 None:intergenic 40.0%
! TTGGCATTTAAAGCTCACGA+TGG - tig0016225:9534-9553 Msa1358340:CDS 40.0%
TCAACCGGATGAATGATGAA+GGG + tig0016225:9582-9601 None:intergenic 40.0%
CAATCAAGTTCCTGGACAAA+TGG + tig0016225:9721-9740 None:intergenic 40.0%
CATTTGTCCAGGAACTTGAT+TGG - tig0016225:9719-9738 Msa1358340:CDS 40.0%
TGCTGGATTACTTCATGACA+CGG - tig0016225:9753-9772 Msa1358340:CDS 40.0%
! CAGATGTTGTGACTTTTGAG+AGG - tig0016225:9785-9804 Msa1358340:intron 40.0%
!! TGTGACTTTTGAGAGGATAG+AGG - tig0016225:9792-9811 Msa1358340:intron 40.0%
TGTTCAAGATGTGAAAGCAG+AGG - tig0016225:10025-10044 Msa1358340:intron 40.0%
!! AATGTTTCTGGCTATGACAG+AGG - tig0016225:10058-10077 Msa1358340:intron 40.0%
ACATATGCCTCCACATAAAC+AGG - tig0016225:10256-10275 Msa1358340:intron 40.0%
AATGATGAAGAGTCACCAGT+AGG + tig0016225:10304-10323 None:intergenic 40.0%
AATAAAATGCAGTGGTGCGA+AGG - tig0016225:10897-10916 Msa1358340:intron 40.0%
GTTACTAAGTTCTTCGTCAC+GGG + tig0016225:11040-11059 None:intergenic 40.0%
! CCAAGTGAAGCAAGAGTTTT+AGG + tig0016225:11180-11199 None:intergenic 40.0%
CCTAAAACTCTTGCTTCACT+TGG - tig0016225:11177-11196 Msa1358340:intron 40.0%
!! GAAAGTACTGAATGAGCCTT+TGG - tig0016225:11428-11447 Msa1358340:intron 40.0%
!! CAATTGAGTTGAGTGTGTGA+CGG - tig0016225:11507-11526 Msa1358340:intron 40.0%
!! AATTGAGTTGAGTGTGTGAC+GGG - tig0016225:11508-11527 Msa1358340:intron 40.0%
CATTGCAATGGAGACATTAC+AGG - tig0016225:11579-11598 Msa1358340:intron 40.0%
TTACATAGTTGCCAAGGCTA+AGG - tig0016225:11657-11676 Msa1358340:CDS 40.0%
TGACACGAAGGAAATTCTCT+TGG - tig0016225:11788-11807 Msa1358340:intron 40.0%
TACACAATCACCCGGAAAAA+AGG + tig0016225:12053-12072 None:intergenic 40.0%
TGCAATGATACACAATCACC+CGG + tig0016225:12061-12080 None:intergenic 40.0%
! GTTTCGTGGATTAACCTGTA+AGG + tig0016225:12214-12233 None:intergenic 40.0%
CAAAGCAAACCTGTGCAATT+TGG + tig0016225:12451-12470 None:intergenic 40.0%
CTACGTTGAAAGGCTTAATG+TGG - tig0016225:12475-12494 Msa1358340:intron 40.0%
CATATGTCACTATGGGTAAG+TGG + tig0016225:12633-12652 None:intergenic 40.0%
!! GCAGATTTGCTATCATGTTC+TGG - tig0016225:12722-12741 Msa1358340:CDS 40.0%
ATTGCAACCCCTAAACCTAA+TGG - tig0016225:12916-12935 Msa1358340:intron 40.0%
TTGCAACCCCTAAACCTAAT+GGG - tig0016225:12917-12936 Msa1358340:intron 40.0%
CCCTTGAAGAAAATGGAATG+TGG + tig0016225:13045-13064 None:intergenic 40.0%
GTACAACCCCTTGAAGAAAA+TGG + tig0016225:13052-13071 None:intergenic 40.0%
! ATGGATTTGATAGCTGAGAG+GGG - tig0016225:13175-13194 Msa1358340:intron 40.0%
! CATGAGCCTTTTCTACAGAT+TGG - tig0016225:13458-13477 Msa1358340:intron 40.0%
CACTGTTACAAGAGATCTTC+TGG - tig0016225:13550-13569 Msa1358340:intron 40.0%
GTCTTTGTATTTACACCCAG+TGG - tig0016225:13581-13600 Msa1358340:intron 40.0%
TCAGAAATAATACCGTCTGC+AGG - tig0016225:13684-13703 Msa1358340:intron 40.0%
CACTGAAATTGGCAACAAGA+TGG - tig0016225:13797-13816 Msa1358340:intron 40.0%
! GTACTGATGGAATCAAGTGT+CGG - tig0016225:13845-13864 Msa1358340:intron 40.0%
ATGAGCTCCAATGAAGTGAA+AGG + tig0016225:14766-14785 None:intergenic 40.0%
!! CTTTTCAAAGGCATAAGCAG+TGG - tig0016225:14823-14842 Msa1358340:CDS 40.0%
GGTTGCAACATGCTAAAACA+CGG - tig0016225:14844-14863 Msa1358340:CDS 40.0%
TAATGAAGGTAGGTCATCTG+AGG - tig0016225:14883-14902 Msa1358340:intron 40.0%
TTCTGTAGTGATATCAGCAG+CGG + tig0016225:15038-15057 None:intergenic 40.0%
GACTTTCTCAGTGATTCTGA+CGG - tig0016225:15067-15086 Msa1358340:intron 40.0%
ACTTTCTCAGTGATTCTGAC+GGG - tig0016225:15068-15087 Msa1358340:intron 40.0%
!! CCTTTTATGTTTGGAGCTAC+TGG + tig0016225:15125-15144 None:intergenic 40.0%
CCAGTAGCTCCAAACATAAA+AGG - tig0016225:15122-15141 Msa1358340:intron 40.0%
GTAGCTCCAAACATAAAAGG+GGG - tig0016225:15125-15144 Msa1358340:intron 40.0%
ACTGTCCTTCAGAGTAAGAA+TGG - tig0016225:15196-15215 Msa1358340:CDS 40.0%
CACTTCCATTCTTACTCTGA+AGG + tig0016225:15204-15223 None:intergenic 40.0%
!! AGAGTAAGAATGGAAGTGCT+TGG - tig0016225:15206-15225 Msa1358340:CDS 40.0%
CTTGAATCATATTGGCGACA+TGG + tig0016225:15315-15334 None:intergenic 40.0%
CAAAAAGTTCATTGGCCACA+TGG + tig0016225:15511-15530 None:intergenic 40.0%
! GTGGCCAATGAACTTTTTGA+TGG - tig0016225:15512-15531 Msa1358340:CDS 40.0%
AGAGTGATTGAAGGATAGGA+TGG - tig0016225:15609-15628 Msa1358340:intron 40.0%
ACTCACCACACAAGAACATA+CGG + tig0016225:15797-15816 None:intergenic 40.0%
! CAGTAAAATTTCTGGGGACT+TGG + tig0016225:15827-15846 None:intergenic 40.0%
! AGATCAAATACCGGGTGTTT+TGG - tig0016225:16127-16146 Msa1358340:intron 40.0%
! GATCAAATACCGGGTGTTTT+GGG - tig0016225:16128-16147 Msa1358340:intron 40.0%
TATAAATGTCTGCGCTTCTG+CGG + tig0016225:16298-16317 None:intergenic 40.0%
AACTCACTAACCCAATAAGC+CGG - tig0016225:16357-16376 Msa1358340:intron 40.0%
ACTTGTGCAGCATTTACACA+AGG - tig0016225:16478-16497 Msa1358340:five_prime_UTR 40.0%
! ATTTACACAAGGAGCTTGCT+AGG - tig0016225:16489-16508 Msa1358340:five_prime_UTR 40.0%
CAAGCACTTTATCACACGTT+TGG + tig0016225:16540-16559 None:intergenic 40.0%
! CAAACGTGTGATAAAGTGCT+TGG - tig0016225:16538-16557 Msa1358340:five_prime_UTR 40.0%
GTGCTTGGTATAATGAGGAT+AGG - tig0016225:16553-16572 Msa1358340:five_prime_UTR 40.0%
GAAGAAGAAGAGAGTGAGAG+TGG + tig0016225:8018-8037 None:intergenic 45.0%
GATAGGTTATGGAGGAGAAG+GGG + tig0016225:8094-8113 None:intergenic 45.0%
AAAGCTCCTAGGGTTCTTAC+CGG - tig0016225:8549-8568 Msa1358340:intron 45.0%
! TGTAGTTCCCTTGGCGTTTT+CGG - tig0016225:8660-8679 Msa1358340:intron 45.0%
GAGAAGCTGAAAAGTTGGGT+CGG - tig0016225:8748-8767 Msa1358340:intron 45.0%
GTGCCGAACAAATCTAAAGG+GGG + tig0016225:8873-8892 None:intergenic 45.0%
GGTGTGCCGAACAAATCTAA+AGG + tig0016225:8876-8895 None:intergenic 45.0%
! AGTTTTCCCCTGGAAGTTTG+TGG - tig0016225:9200-9219 Msa1358340:CDS 45.0%
! GTTTTCCCCTGGAAGTTTGT+GGG - tig0016225:9201-9220 Msa1358340:CDS 45.0%
CAACTGCCAAGGTTCAGTAA+AGG + tig0016225:9241-9260 None:intergenic 45.0%
CTTTACTGAACCTTGGCAGT+TGG - tig0016225:9239-9258 Msa1358340:CDS 45.0%
AATACATGTGCCAACTGCCA+AGG + tig0016225:9252-9271 None:intergenic 45.0%
AGGAGGAAGATACGAGATCA+CGG + tig0016225:9363-9382 None:intergenic 45.0%
CGAACCCTTCATCATTCATC+CGG - tig0016225:9575-9594 Msa1358340:intron 45.0%
CTCAACCGGATGAATGATGA+AGG + tig0016225:9583-9602 None:intergenic 45.0%
CTTCATCATTCATCCGGTTG+AGG - tig0016225:9581-9600 Msa1358340:intron 45.0%
GAATGTCCAACCATTTGTCC+AGG - tig0016225:9708-9727 Msa1358340:CDS 45.0%
CAAGTTCCTGGACAAATGGT+TGG + tig0016225:9717-9736 None:intergenic 45.0%
TTGACTCCCAATCAAGTTCC+TGG + tig0016225:9729-9748 None:intergenic 45.0%
!! GACTTTTGAGAGGATAGAGG+AGG - tig0016225:9795-9814 Msa1358340:intron 45.0%
GAGAGGATAGAGGAGGAATT+TGG - tig0016225:9802-9821 Msa1358340:intron 45.0%
CATTGTGGAAGGAGAGACTA+AGG - tig0016225:9840-9859 Msa1358340:intron 45.0%
ATGTGAAAGCAGAGGACCTT+CGG - tig0016225:10033-10052 Msa1358340:intron 45.0%
TAGCCAGAAACATTTGCCGA+AGG + tig0016225:10052-10071 None:intergenic 45.0%
! CCTTTTGGTCCGTTTGCATA+TGG + tig0016225:10583-10602 None:intergenic 45.0%
CCATATGCAAACGGACCAAA+AGG - tig0016225:10580-10599 Msa1358340:intron 45.0%
AACTCTTGCTTCACTTGGCT+TGG - tig0016225:11182-11201 Msa1358340:intron 45.0%
ACTCTTGCTTCACTTGGCTT+GGG - tig0016225:11183-11202 Msa1358340:intron 45.0%
CGTCACACACTCAACTCAAT+TGG + tig0016225:11509-11528 None:intergenic 45.0%
CTCCTTTGGCAAAGTTGCTT+GGG - tig0016225:11608-11627 Msa1358340:CDS 45.0%
ATCCCAAGCAACTTTGCCAA+AGG + tig0016225:11613-11632 None:intergenic 45.0%
!! ATGTGGACTAGTGGCATTGT+AGG + tig0016225:11703-11722 None:intergenic 45.0%
!!! CTTTTAGAGGTAGTACTGGC+CGG - tig0016225:11946-11965 Msa1358340:intron 45.0%
CTGTGTGTAAAGAGCCTTAC+AGG - tig0016225:12197-12216 Msa1358340:intron 45.0%
ATTAAACCAAAGCCGTGCGT+TGG - tig0016225:12575-12594 Msa1358340:intron 45.0%
TTAAACCAAAGCCGTGCGTT+GGG - tig0016225:12576-12595 Msa1358340:intron 45.0%
! CACTTGCTCCACCTTTTACT+TGG - tig0016225:12662-12681 Msa1358340:CDS 45.0%
!! TTTGGATTAGCTAGGGCAGT+AGG + tig0016225:13074-13093 None:intergenic 45.0%
GCATTGCAGCTCACTATAGT+GGG - tig0016225:13197-13216 Msa1358340:intron 45.0%
AGTGGGAGAGAATTCGTTAC+TGG - tig0016225:13214-13233 Msa1358340:intron 45.0%
! GAGAGAATTCGTTACTGGCT+TGG - tig0016225:13219-13238 Msa1358340:intron 45.0%
!! GAATTCGTTACTGGCTTGGT+TGG - tig0016225:13223-13242 Msa1358340:intron 45.0%
! AGCCTTTTCTACAGATTGGC+TGG - tig0016225:13462-13481 Msa1358340:intron 45.0%
AGCCAGCCAATCTGTAGAAA+AGG + tig0016225:13467-13486 None:intergenic 45.0%
GGCTCAATGCTATTAGAGAG+TGG - tig0016225:13483-13502 Msa1358340:intron 45.0%
GAGTGGCAAGAAGAGTTTGT+TGG - tig0016225:13500-13519 Msa1358340:intron 45.0%
TTGTTGGCAACATGAGCTCT+AGG - tig0016225:13516-13535 Msa1358340:intron 45.0%
TGTTGGCAACATGAGCTCTA+GGG - tig0016225:13517-13536 Msa1358340:intron 45.0%
!! CATGAGCTCTAGGGAATTTG+TGG - tig0016225:13526-13545 Msa1358340:intron 45.0%
TGTATTTACACCCAGTGGAG+AGG - tig0016225:13586-13605 Msa1358340:intron 45.0%
TCAATCACAGTAGCACCTTG+AGG + tig0016225:13759-13778 None:intergenic 45.0%
CAACAAGATGGTAGCTGCAA+AGG - tig0016225:13809-13828 Msa1358340:intron 45.0%
GCTTGCAAATGCAGAAGTTG+TGG - tig0016225:13972-13991 Msa1358340:intron 45.0%
!! AGTGATGGATCTGATGCAAC+TGG - tig0016225:14052-14071 Msa1358340:intron 45.0%
TGTGCAACCTTGCACACATA+TGG - tig0016225:14123-14142 Msa1358340:intron 45.0%
!! CTGATTTGCTAGAAAGTGCC+TGG + tig0016225:14803-14822 None:intergenic 45.0%
CTTTCTCAGTGATTCTGACG+GGG - tig0016225:15069-15088 Msa1358340:intron 45.0%
TCCTGCCAGGTTTAGAAAGT+TGG - tig0016225:15359-15378 Msa1358340:intron 45.0%
GCTTGCCAACTTTCTAAACC+TGG + tig0016225:15367-15386 None:intergenic 45.0%
AAGCCCATAAAATTGCCTCG+TGG - tig0016225:15383-15402 Msa1358340:CDS 45.0%
! GTGCCACGAGGCAATTTTAT+GGG + tig0016225:15389-15408 None:intergenic 45.0%
! TGTGCCACGAGGCAATTTTA+TGG + tig0016225:15390-15409 None:intergenic 45.0%
CCTCGTGGCACAATATAGAA+GGG - tig0016225:15398-15417 Msa1358340:CDS 45.0%
!! TAGAAGGGCATTCCATCCAA+TGG - tig0016225:15413-15432 Msa1358340:CDS 45.0%
GTTGTATGCATAGACCGAAG+AGG - tig0016225:15442-15461 Msa1358340:CDS 45.0%
GATCAGGAAGCTTACCTCTT+CGG + tig0016225:15459-15478 None:intergenic 45.0%
TCAATCACTCTCTTACCCGT+TGG + tig0016225:15600-15619 None:intergenic 45.0%
ACGGGTAAGAGAGTGATTGA+AGG - tig0016225:15600-15619 Msa1358340:intron 45.0%
TATTTCAGGCATGATGGCTG+AGG - tig0016225:15741-15760 Msa1358340:intron 45.0%
ACATACGGCTATGTCTGAAG+TGG + tig0016225:15782-15801 None:intergenic 45.0%
CATAGCCGTATGTTCTTGTG+TGG - tig0016225:15789-15808 Msa1358340:intron 45.0%
!!! AAATACCGGGTGTTTTGGGA+TGG - tig0016225:16132-16151 Msa1358340:intron 45.0%
TCTAGCATTCAAGAACGCCA+TGG + tig0016225:16193-16212 None:intergenic 45.0%
! GATTTGGTTGCAGTTGCACT+AGG - tig0016225:16214-16233 Msa1358340:intron 45.0%
GGACGAAACTGTAGTGAGTA+TGG + tig0016225:16240-16259 None:intergenic 45.0%
!! GGCTTATTGGGTTAGTGAGT+TGG + tig0016225:16358-16377 None:intergenic 45.0%
! GAAGCGAGTGAGTTGAGAGA+GGG + tig0016225:7984-8003 None:intergenic 50.0%
! AGAAGCGAGTGAGTTGAGAG+AGG + tig0016225:7985-8004 None:intergenic 50.0%
GCTTCTGCACCTTTCATGTC+AGG - tig0016225:8164-8183 Msa1358340:three_prime_UTR 50.0%
TGCAATTCTTGGAGAGGGGA+TGG - tig0016225:8486-8505 Msa1358340:intron 50.0%
TCTTGGAGAGGGGATGGAAA+TGG - tig0016225:8492-8511 Msa1358340:intron 50.0%
AGAAAGCCGGTAAGAACCCT+AGG + tig0016225:8558-8577 None:intergenic 50.0%
AGCTGTGCTTGCAAGAAAGC+CGG + tig0016225:8571-8590 None:intergenic 50.0%
GGAAATGCCGAAAACGCCAA+GGG + tig0016225:8670-8689 None:intergenic 50.0%
AGGAAATGCCGAAAACGCCA+AGG + tig0016225:8671-8690 None:intergenic 50.0%
GGTTCGAACCCTTGACCTAT+TGG - tig0016225:8835-8854 Msa1358340:intron 50.0%
ACAGTCACAAGCAGACAGCT+CGG + tig0016225:8901-8920 None:intergenic 50.0%
TGTGACGCCAAGTGCTTTGT+CGG + tig0016225:9083-9102 None:intergenic 50.0%
ACACTTCACGAGGGATTCTC+TGG - tig0016225:9100-9119 Msa1358340:intron 50.0%
TACCTCCCACAAACTTCCAG+GGG + tig0016225:9209-9228 None:intergenic 50.0%
GTACCTCCCACAAACTTCCA+GGG + tig0016225:9210-9229 None:intergenic 50.0%
TGTACCTCCCACAAACTTCC+AGG + tig0016225:9211-9230 None:intergenic 50.0%
GGAGGAAGATACGAGATCAC+GGG + tig0016225:9362-9381 None:intergenic 50.0%
GATGGTCAGAAAAGACGCAG+CGG - tig0016225:9552-9571 Msa1358340:CDS 50.0%
TTCATCCGGTTGAGGTTGCA+CGG - tig0016225:9589-9608 Msa1358340:intron 50.0%
AGAATCCGTGCAACCTCAAC+CGG + tig0016225:9597-9616 None:intergenic 50.0%
GTTGAGGTTGCACGGATTCT+TGG - tig0016225:9597-9616 Msa1358340:intron 50.0%
GATTGGGAGTCAATTGCTGC+TGG - tig0016225:9736-9755 Msa1358340:CDS 50.0%
TGCTACAGTGCGTCACATTG+TGG - tig0016225:9825-9844 Msa1358340:intron 50.0%
ACAGTGCGTCACATTGTGGA+AGG - tig0016225:9829-9848 Msa1358340:intron 50.0%
TCCCAACTAGGTGTCAAAGC+TGG - tig0016225:9971-9990 Msa1358340:intron 50.0%
! CCCAGCTTTGACACCTAGTT+GGG + tig0016225:9975-9994 None:intergenic 50.0%
CCCAACTAGGTGTCAAAGCT+GGG - tig0016225:9972-9991 Msa1358340:intron 50.0%
CCAACTAGGTGTCAAAGCTG+GGG - tig0016225:9973-9992 Msa1358340:intron 50.0%
GGACCTTCGGCAAATGTTTC+TGG - tig0016225:10046-10065 Msa1358340:intron 50.0%
!! GTTTCTGGCTATGACAGAGG+AGG - tig0016225:10061-10080 Msa1358340:intron 50.0%
CTTATTTGGCAACAGCGCAG+CGG + tig0016225:11076-11095 None:intergenic 50.0%
CTTTAACCCATGTGACTGCG+AGG + tig0016225:11226-11245 None:intergenic 50.0%
! CTCGCAGTCACATGGGTTAA+AGG - tig0016225:11224-11243 Msa1358340:intron 50.0%
GCTCCTTTGGCAAAGTTGCT+TGG - tig0016225:11607-11626 Msa1358340:CDS 50.0%
TGCATGCTAGTCCTTAGCCT+TGG + tig0016225:11671-11690 None:intergenic 50.0%
! TGCATTGGCACTGAGTTTCG+TGG + tig0016225:12228-12247 None:intergenic 50.0%
TAAACCAAAGCCGTGCGTTG+GGG - tig0016225:12577-12596 Msa1358340:intron 50.0%
! ACCAGCTGTGGACTGCATAA+AGG + tig0016225:12608-12627 None:intergenic 50.0%
!! CATGTTCTGGGGTTGATCCA+TGG - tig0016225:12735-12754 Msa1358340:intron 50.0%
! TGGGGTTGATCCATGGAATC+TGG - tig0016225:12742-12761 Msa1358340:intron 50.0%
GAATAGGGGTCCAGATTCCA+TGG + tig0016225:12755-12774 None:intergenic 50.0%
GGCATTGCAGCTCACTATAG+TGG - tig0016225:13196-13215 Msa1358340:intron 50.0%
TGCCCAGTGGAAAAAGCTCA+AGG - tig0016225:13254-13273 Msa1358340:intron 50.0%
GCCCAGTGGAAAAAGCTCAA+GGG - tig0016225:13255-13274 Msa1358340:intron 50.0%
!! CCCCTTGAGCTTTTTCCACT+GGG + tig0016225:13259-13278 None:intergenic 50.0%
CCCAGTGGAAAAAGCTCAAG+GGG - tig0016225:13256-13275 Msa1358340:intron 50.0%
CCAGTGGAAAAAGCTCAAGG+GGG - tig0016225:13257-13276 Msa1358340:intron 50.0%
GCGTACTCTGAGTGCAATGT+TGG + tig0016225:13305-13324 None:intergenic 50.0%
TCCACTGTTACCTCTCCACT+GGG + tig0016225:13599-13618 None:intergenic 50.0%
ATCCACTGTTACCTCTCCAC+TGG + tig0016225:13600-13619 None:intergenic 50.0%
AAGCATCACGAACCTGCAGA+CGG + tig0016225:13699-13718 None:intergenic 50.0%
AAAGGGGACATGATGCTGCA+GGG - tig0016225:15286-15305 Msa1358340:intron 50.0%
GCCAACTTTCTAAACCTGGC+AGG + tig0016225:15363-15382 None:intergenic 50.0%
GCCTCGTGGCACAATATAGA+AGG - tig0016225:15397-15416 Msa1358340:CDS 50.0%
CCCTTCTATATTGTGCCACG+AGG + tig0016225:15401-15420 None:intergenic 50.0%
CTTATCAAACGACCAGGCTG+AGG - tig0016225:15918-15937 Msa1358340:intron 50.0%
GTAGACCATCCCAAAACACC+CGG + tig0016225:16140-16159 None:intergenic 50.0%
!!! GGTGTTTTGGGATGGTCTAC+TGG - tig0016225:16140-16159 Msa1358340:intron 50.0%
! GATGGTCTACTGGCTGTAGT+TGG - tig0016225:16150-16169 Msa1358340:intron 50.0%
! CCATGGTTTTCCATCAGGCT+TGG + tig0016225:16176-16195 None:intergenic 50.0%
CCAAGCCTGATGGAAAACCA+TGG - tig0016225:16173-16192 Msa1358340:intron 50.0%
! GAACGCCATGGTTTTCCATC+AGG + tig0016225:16181-16200 None:intergenic 50.0%
! GAGTGAGTTGAGAGAGGGTG+AGG + tig0016225:7979-7998 None:intergenic 55.0%
GTGTGCGTCGAAAGCTCCTA+GGG - tig0016225:8539-8558 Msa1358340:intron 55.0%
TCACAAGCAGACAGCTCGGT+TGG + tig0016225:8897-8916 None:intergenic 55.0%
ACTTGGCGTCACACTTCACG+AGG - tig0016225:9090-9109 Msa1358340:intron 55.0%
CTTGGCGTCACACTTCACGA+GGG - tig0016225:9091-9110 Msa1358340:intron 55.0%
ACTTCCAGGGGAAAACTCGC+TGG + tig0016225:9197-9216 None:intergenic 55.0%
TTCCCCTGGAAGTTTGTGGG+AGG - tig0016225:9204-9223 Msa1358340:CDS 55.0%
GATACGAGATCACGGGCCTA+AGG + tig0016225:9355-9374 None:intergenic 55.0%
! CCCCAGCTTTGACACCTAGT+TGG + tig0016225:9976-9995 None:intergenic 55.0%
!! TGCTTCACTTGGCTTGGGCT+AGG - tig0016225:11188-11207 Msa1358340:intron 55.0%
!! GCTTCACTTGGCTTGGGCTA+GGG - tig0016225:11189-11208 Msa1358340:intron 55.0%
GCCTTTATGCAGTCCACAGC+TGG - tig0016225:12604-12623 Msa1358340:intron 55.0%
GGGTAAGTGGTTACCAGCTG+TGG + tig0016225:12620-12639 None:intergenic 55.0%
!! CCCCCTTGAGCTTTTTCCAC+TGG + tig0016225:13260-13279 None:intergenic 55.0%
ACCCAGTGGAGAGGTAACAG+TGG - tig0016225:13595-13614 Msa1358340:intron 55.0%
GCATTTGCAAGCACTCGTGC+AGG + tig0016225:13964-13983 None:intergenic 55.0%
!! TGGAAGTGCTTGGACACCCA+AGG - tig0016225:15216-15235 Msa1358340:CDS 55.0%
GCTTGGACACCCAAGGTCAA+TGG - tig0016225:15223-15242 Msa1358340:CDS 55.0%
CAAAGGGGACATGATGCTGC+AGG - tig0016225:15285-15304 Msa1358340:intron 55.0%
AACGACCAGGCTGAGGTTGA+TGG - tig0016225:15925-15944 Msa1358340:intron 55.0%
CTGTAGTTGGCCAAGCCTGA+TGG - tig0016225:16163-16182 Msa1358340:intron 55.0%
TAACCCAATAAGCCGGCAGC+AGG - tig0016225:16364-16383 Msa1358340:intron 55.0%
CTCAATTGACTGCCTGCTGC+CGG + tig0016225:16379-16398 None:intergenic 55.0%
CGTGTGCGTCGAAAGCTCCT+AGG - tig0016225:8538-8557 Msa1358340:intron 60.0%
AAACTCGCTGGCAACGTCCG+AGG + tig0016225:9185-9204 None:intergenic 60.0%
! GTTGCCAGCGAGTTTTCCCC+TGG - tig0016225:9190-9209 Msa1358340:CDS 60.0%
ACCTAGGCCTCGCAGTCACA+TGG - tig0016225:11216-11235 Msa1358340:intron 60.0%
CCTAGGCCTCGCAGTCACAT+GGG - tig0016225:11217-11236 Msa1358340:intron 60.0%
CAAAGCCGTGCGTTGGGGTT+GGG - tig0016225:12582-12601 Msa1358340:intron 60.0%
AAAGGCCCAACCCCAACGCA+CGG + tig0016225:12590-12609 None:intergenic 60.0%
! GTTGGAAGTGCAGTGCCCAG+TGG - tig0016225:13241-13260 Msa1358340:intron 60.0%
GGCTGAGGTCGCTACAGCAT+TGG - tig0016225:15756-15775 Msa1358340:intron 60.0%
!! GACCAGGCTGAGGTTGATGG+CGG - tig0016225:15928-15947 Msa1358340:intron 60.0%
TTCCGCCATCAACCTCAGCC+TGG + tig0016225:15933-15952 None:intergenic 60.0%
!! AGGCTGAGGTTGATGGCGGA+AGG - tig0016225:15932-15951 Msa1358340:intron 60.0%
!! GGCTGAGGTTGATGGCGGAA+GGG - tig0016225:15933-15952 Msa1358340:intron 60.0%
!! GCTGAGGTTGATGGCGGAAG+GGG - tig0016225:15934-15953 Msa1358340:intron 60.0%
!! GGTTGATGGCGGAAGGGGAA+TGG - tig0016225:15939-15958 Msa1358340:intron 60.0%
!! CTGCCTGCTGCCGGCTTATT+GGG + tig0016225:16370-16389 None:intergenic 60.0%
!! ACTGCCTGCTGCCGGCTTAT+TGG + tig0016225:16371-16390 None:intergenic 60.0%
!! CACTTGGCTTGGGCTAGGGC+CGG - tig0016225:11193-11212 Msa1358340:intron 65.0%
GTGACTGCGAGGCCTAGGTC+CGG + tig0016225:11215-11234 None:intergenic 65.0%
CCCATGTGACTGCGAGGCCT+AGG + tig0016225:11220-11239 None:intergenic 65.0%
CCAACCCCAACGCACGGCTT+TGG + tig0016225:12584-12603 None:intergenic 65.0%
CCAAAGCCGTGCGTTGGGGT+TGG - tig0016225:12581-12600 Msa1358340:intron 65.0%
! CTTGGGCTAGGGCCGGACCT+AGG - tig0016225:11200-11219 Msa1358340:intron 70.0%
Chromosome Type Strat End Strand Name
tig0016225 gene 7907 16686 7907 ID=Msa1358340;Name=Msa1358340
tig0016225 mRNA 7907 16686 7907 ID=Msa1358340-mRNA-1;Parent=Msa1358340;Name=Msa1358340-mRNA-1;_AED=0.11;_eAED=0.11;_QI=254|1|1|1|1|1|24|475|883
tig0016225 exon 7907 8486 7907 ID=Msa1358340-mRNA-1:exon:10839;Parent=Msa1358340-mRNA-1
tig0016225 exon 8591 8659 8591 ID=Msa1358340-mRNA-1:exon:10838;Parent=Msa1358340-mRNA-1
tig0016225 exon 8783 8844 8783 ID=Msa1358340-mRNA-1:exon:10837;Parent=Msa1358340-mRNA-1
tig0016225 exon 9130 9583 9130 ID=Msa1358340-mRNA-1:exon:10836;Parent=Msa1358340-mRNA-1
tig0016225 exon 9703 9789 9703 ID=Msa1358340-mRNA-1:exon:10835;Parent=Msa1358340-mRNA-1
tig0016225 exon 10582 10653 10582 ID=Msa1358340-mRNA-1:exon:10834;Parent=Msa1358340-mRNA-1
tig0016225 exon 10763 10849 10763 ID=Msa1358340-mRNA-1:exon:10833;Parent=Msa1358340-mRNA-1
tig0016225 exon 10986 11117 10986 ID=Msa1358340-mRNA-1:exon:10832;Parent=Msa1358340-mRNA-1
tig0016225 exon 11275 11433 11275 ID=Msa1358340-mRNA-1:exon:10831;Parent=Msa1358340-mRNA-1
tig0016225 exon 11588 11689 11588 ID=Msa1358340-mRNA-1:exon:10830;Parent=Msa1358340-mRNA-1
tig0016225 exon 11811 11867 11811 ID=Msa1358340-mRNA-1:exon:10829;Parent=Msa1358340-mRNA-1
tig0016225 exon 11968 12030 11968 ID=Msa1358340-mRNA-1:exon:10828;Parent=Msa1358340-mRNA-1
tig0016225 exon 12133 12193 12133 ID=Msa1358340-mRNA-1:exon:10827;Parent=Msa1358340-mRNA-1
tig0016225 exon 12375 12472 12375 ID=Msa1358340-mRNA-1:exon:10826;Parent=Msa1358340-mRNA-1
tig0016225 exon 12639 12746 12639 ID=Msa1358340-mRNA-1:exon:10825;Parent=Msa1358340-mRNA-1
tig0016225 exon 12948 13019 12948 ID=Msa1358340-mRNA-1:exon:10824;Parent=Msa1358340-mRNA-1
tig0016225 exon 14316 14393 14316 ID=Msa1358340-mRNA-1:exon:10823;Parent=Msa1358340-mRNA-1
tig0016225 exon 14511 14612 14511 ID=Msa1358340-mRNA-1:exon:10822;Parent=Msa1358340-mRNA-1
tig0016225 exon 14732 14863 14732 ID=Msa1358340-mRNA-1:exon:10821;Parent=Msa1358340-mRNA-1
tig0016225 exon 14967 15059 14967 ID=Msa1358340-mRNA-1:exon:10820;Parent=Msa1358340-mRNA-1
tig0016225 exon 15178 15243 15178 ID=Msa1358340-mRNA-1:exon:10819;Parent=Msa1358340-mRNA-1
tig0016225 exon 15368 15547 15368 ID=Msa1358340-mRNA-1:exon:10818;Parent=Msa1358340-mRNA-1
tig0016225 exon 15943 16130 15943 ID=Msa1358340-mRNA-1:exon:10817;Parent=Msa1358340-mRNA-1
tig0016225 exon 16408 16686 16408 ID=Msa1358340-mRNA-1:exon:10816;Parent=Msa1358340-mRNA-1
tig0016225 five_prime_UTR 16433 16686 16433 ID=Msa1358340-mRNA-1:five_prime_utr;Parent=Msa1358340-mRNA-1
tig0016225 CDS 16408 16432 16408 ID=Msa1358340-mRNA-1:cds;Parent=Msa1358340-mRNA-1
tig0016225 CDS 15943 16130 15943 ID=Msa1358340-mRNA-1:cds;Parent=Msa1358340-mRNA-1
tig0016225 CDS 15368 15547 15368 ID=Msa1358340-mRNA-1:cds;Parent=Msa1358340-mRNA-1
tig0016225 CDS 15178 15243 15178 ID=Msa1358340-mRNA-1:cds;Parent=Msa1358340-mRNA-1
tig0016225 CDS 14967 15059 14967 ID=Msa1358340-mRNA-1:cds;Parent=Msa1358340-mRNA-1
tig0016225 CDS 14732 14863 14732 ID=Msa1358340-mRNA-1:cds;Parent=Msa1358340-mRNA-1
tig0016225 CDS 14511 14612 14511 ID=Msa1358340-mRNA-1:cds;Parent=Msa1358340-mRNA-1
tig0016225 CDS 14316 14393 14316 ID=Msa1358340-mRNA-1:cds;Parent=Msa1358340-mRNA-1
tig0016225 CDS 12948 13019 12948 ID=Msa1358340-mRNA-1:cds;Parent=Msa1358340-mRNA-1
tig0016225 CDS 12639 12746 12639 ID=Msa1358340-mRNA-1:cds;Parent=Msa1358340-mRNA-1
tig0016225 CDS 12375 12472 12375 ID=Msa1358340-mRNA-1:cds;Parent=Msa1358340-mRNA-1
tig0016225 CDS 12133 12193 12133 ID=Msa1358340-mRNA-1:cds;Parent=Msa1358340-mRNA-1
tig0016225 CDS 11968 12030 11968 ID=Msa1358340-mRNA-1:cds;Parent=Msa1358340-mRNA-1
tig0016225 CDS 11811 11867 11811 ID=Msa1358340-mRNA-1:cds;Parent=Msa1358340-mRNA-1
tig0016225 CDS 11588 11689 11588 ID=Msa1358340-mRNA-1:cds;Parent=Msa1358340-mRNA-1
tig0016225 CDS 11275 11433 11275 ID=Msa1358340-mRNA-1:cds;Parent=Msa1358340-mRNA-1
tig0016225 CDS 10986 11117 10986 ID=Msa1358340-mRNA-1:cds;Parent=Msa1358340-mRNA-1
tig0016225 CDS 10763 10849 10763 ID=Msa1358340-mRNA-1:cds;Parent=Msa1358340-mRNA-1
tig0016225 CDS 10582 10653 10582 ID=Msa1358340-mRNA-1:cds;Parent=Msa1358340-mRNA-1
tig0016225 CDS 9703 9789 9703 ID=Msa1358340-mRNA-1:cds;Parent=Msa1358340-mRNA-1
tig0016225 CDS 9130 9583 9130 ID=Msa1358340-mRNA-1:cds;Parent=Msa1358340-mRNA-1
tig0016225 CDS 8783 8844 8783 ID=Msa1358340-mRNA-1:cds;Parent=Msa1358340-mRNA-1
tig0016225 CDS 8591 8659 8591 ID=Msa1358340-mRNA-1:cds;Parent=Msa1358340-mRNA-1
tig0016225 CDS 8382 8486 8382 ID=Msa1358340-mRNA-1:cds;Parent=Msa1358340-mRNA-1
tig0016225 three_prime_UTR 7907 8381 7907 ID=Msa1358340-mRNA-1:three_prime_utr;Parent=Msa1358340-mRNA-1
Gene Sequence

>Msa1358340

ATGGCTTCTGCACCTTTCATGTCAGTTTCTTTGGAGTGTGTGAATGTATGCAATTCTTGGAGAGGGGATGGAAATGGAAGATATGATTGTAATCATCTATCGTGTGCGTCGAAAGCTCCTAGGGTTCTTACCGGCTTTCTTGCAAGCACAGCTCATCCTCATCAATATTTTTTGTTGAATGGTCGAAATGGAAGAAGTAACCAGTTTAATTTTGCATGTGAAGCTTTTAGTATAGTAGGTTCATATTCCGACAAAGCACTTGGCGTCACACTTCACGAGGGATTCTCTGGATCTATCTTTTCTAGATTTGCATCTAGAGAATGGCAGTTGTCTTGTTCTTCGGTTTTTTCCTCGGACGTTGCCAGCGAGTTTTCCCCTGGAAGTTTGTGGGAGGACCTTAGGCCCGTGATCTCGTATCTTCCTCCTAAAGAACTGGAGTTAGTCCATAATGCTTTTACGTTGGCATTTAAAGCTCACGATGGTCAGAAAAGACGCAGCGGCGAACCCTTCATCATTCATCCGGTTGAGGTTGCACGGATTCTTGGAGAACTCGAACTTGATTGGGAGTCAATTGCTGCTGGATTACTTCATGACACGGTTGAAGATACAGATGTTGTGACTTTTGAGAGGATAGAGGAGGAATTTGGTGCTACAGTGCGTCACATTGTGGAAGGAGAGACTAAGGTGTCAAAGCTGGGGAAGTTGAAGTACAAGAATGAAAATGATTCTGTTCAAGATGTGAAAGCAGAGGACCTTCGGCAAATGTTTCTGGCTATGACAGAGGAGGTTCGTGTTATTATCGTCAAATTAGCAGACAGGTTACATAACATGCGCACTCTTTCACATATGCCTCCACATAAACAGAATAGCATTGCAATGGAGACATTACAGGTATTTGCTCCTTTGGCAAAGTTGCTTGGGATGTATCAAATTAAGTCAGAACTAGAAAATCTATCATTTATGTACACAAATCCTGAAGATTATGCAAAGGTGAAGAGAAGAGTTGCCGACCTATTCAAAGAACATGAGAAAGATCTTTTAGAGGCGAACAAAATATTGTTAAAGAAAATCCAAGATGATCAATTCTTAGACCTTATGACAGTTAAAACGGAAGTTCGTGCTGTGTGTAAAGAGCCTTACAGTGTCTATAAAGCTGTGCTCAAATCTAAAAGCTTGATCAATGAGATTAACCAAATTGCACAGCTTCGTATCATTATTAAACCAAAGCCGTGCGTTGGGGTTGGGCCTTTATGCAGTCCACAGCTGATTTGCTATCATGTTCTGGGGTTGATCCATGGAATCTGGACCCCTATTCCTAGATCTGTGAAGGATTATATTGCAACCCCTAAACCTAATGGGTACAAAAGTCTTCATAGCACTGTGATTCCATTTTTGTATGAGAGTATGTTCAGGCTTGAAATACAGATTAGAACAGAAGAAATGGATTTGATAGCTGAGAGGGGCATTGCAGCTCACTATAGTGGGAGAGAATTCGTTACTGGCTTGGTTGGAAGTGCAGTGCCCAGTGGAAAAAGCTCAAGGGGGAAGACAGTGTGTCTTAGCAATGCCAACATTGCACTCAGAATTGGCTGGCTCAATGCTATTAGAGAGTGGCAAGAAGAGTTTGTTGGCAACATGAGCTCTAGGGAATTTGTGGACACTGTTACAAGAGATCTTCTGGGCAGTCGTGTCTTTGTATTTACACCCAGTGGAGAGATTAAGAATCTTCCTCAAGGTGCTACTGTGATTGACTATGCTTATATGATACACACTGAAATTGGCAACAAGATGGTAGCTGCAAAGGTCAACGGAAATCTTGTTTCTCCTGCACGAGTGCTTGCAAATGCAGAAGTTGTGGAGATAATCACATATAATGCACTTTCTAGCAAATCAGCTTTTCAAAGGCATAAGCAGTGGTTGCAACATGCTAAAACACGGAGTGCAAGACACAAAATAATGAAGTTTCTGAAGGAGCAAGCTGCACTTTCCGCTGCTGATATCACTACAGAAGCAGTTAATGACTTTCTCAGTGATTCTGACGGGGATAGTGAATCTGAAAAACTGTCAAATGGTTCCAGTAGCTCCAAACATAAAAGGGGGAAAATATTATTGAACGGTGTGGAAATATCAACTTCAGAAAGAAGTGAGACTGTCCTTCAGAGTAAGAATGGAAGTGCTTGGACACCCAAGGTCAATGGAAAACACAATAAGCACGTGCATCATGTAAATTTGAAGGGCAAAGGGGACATGATGCTGCAGGGAAACCATGTCGCCAATATGATTCAAGTTAACAATCCAAAATATAAAGAAGTCCTGCCAGGTTTAGAAAGTTGGCAAGCCCATAAAATTGCCTCGTGGCACAATATAGAAGGGCATTCCATCCAATGGTTATCTGTTGTATGCATAGACCGAAGAGGCATGATGGCTGAGGTCGCTACAGCATTGGCCACTTCAGACATAGCCGTATGTTCTTGTGTGGCTGAGGTTGATGGCGGAAGGGGAATGGCTGTTATGTTATTTCAAGTTGAAGGAAATTTAGAAAATTTGGTGAGTGCTTGCTCTAGAGTAGATCAAATACCGGGTGTTTTGGGATGGTCTACTGGCTGTAGTTGGCCAAGCCTGATGGAAAACCATGGCGTTCTTGAATGCTAG

Protein sequence

>Msa1358340

MASAPFMSVSLECVNVCNSWRGDGNGRYDCNHLSCASKAPRVLTGFLASTAHPHQYFLLNGRNGRSNQFNFACEAFSIVGSYSDKALGVTLHEGFSGSIFSRFASREWQLSCSSVFSSDVASEFSPGSLWEDLRPVISYLPPKELELVHNAFTLAFKAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTDVVTFERIEEEFGATVRHIVEGETKVSKLGKLKYKNENDSVQDVKAEDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQNSIAMETLQVFAPLAKLLGMYQIKSELENLSFMYTNPEDYAKVKRRVADLFKEHEKDLLEANKILLKKIQDDQFLDLMTVKTEVRAVCKEPYSVYKAVLKSKSLINEINQIAQLRIIIKPKPCVGVGPLCSPQLICYHVLGLIHGIWTPIPRSVKDYIATPKPNGYKSLHSTVIPFLYESMFRLEIQIRTEEMDLIAERGIAAHYSGREFVTGLVGSAVPSGKSSRGKTVCLSNANIALRIGWLNAIREWQEEFVGNMSSREFVDTVTRDLLGSRVFVFTPSGEIKNLPQGATVIDYAYMIHTEIGNKMVAAKVNGNLVSPARVLANAEVVEIITYNALSSKSAFQRHKQWLQHAKTRSARHKIMKFLKEQAALSAADITTEAVNDFLSDSDGDSESEKLSNGSSSSKHKRGKILLNGVEISTSERSETVLQSKNGSAWTPKVNGKHNKHVHHVNLKGKGDMMLQGNHVANMIQVNNPKYKEVLPGLESWQAHKIASWHNIEGHSIQWLSVVCIDRRGMMAEVATALATSDIAVCSCVAEVDGGRGMAVMLFQVEGNLENLVSACSRVDQIPGVLGWSTGCSWPSLMENHGVLEC*