Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1182880 | XP_003626874.1 | 97.619 | 168 | 4 | 0 | 1 | 168 | 1 | 168 | 3.38e-113 | 328 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028660 | Msa1182880 | 0.802212 | 6.243446e-49 | -8.615850e-47 |
| Msa0043980 | Msa1182880 | 0.802914 | 4.474218e-49 | -8.615850e-47 |
| Msa0054780 | Msa1182880 | 0.805902 | 1.066848e-49 | -8.615850e-47 |
| Msa0076320 | Msa1182880 | 0.811479 | 6.857452e-51 | -8.615850e-47 |
| Msa0096030 | Msa1182880 | 0.802025 | 6.822926e-49 | -8.615850e-47 |
| Msa0608710 | Msa1182880 | 0.812490 | 4.130017e-51 | -8.615850e-47 |
| Msa0610430 | Msa1182880 | 0.803544 | 3.314758e-49 | -8.615850e-47 |
| Msa0661190 | Msa1182880 | -0.808301 | 3.312647e-50 | -8.615850e-47 |
| Msa0833460 | Msa1182880 | 0.809230 | 2.096393e-50 | -8.615850e-47 |
| Msa0184780 | Msa1182880 | 0.824215 | 9.107607e-54 | -8.615850e-47 |
| Msa0228070 | Msa1182880 | 0.806449 | 8.180627e-50 | -8.615850e-47 |
| Msa0376910 | Msa1182880 | 0.805556 | 1.260712e-49 | -8.615850e-47 |
| Msa0436760 | Msa1182880 | 0.806471 | 8.095251e-50 | -8.615850e-47 |
| Msa0442200 | Msa1182880 | 0.811751 | 5.986583e-51 | -8.615850e-47 |
| Msa0477080 | Msa1182880 | 0.810714 | 1.004688e-50 | -8.615850e-47 |
| Msa1034150 | Msa1182880 | 0.815213 | 1.037316e-51 | -8.615850e-47 |
| Msa1037420 | Msa1182880 | 0.804618 | 1.981043e-49 | -8.615850e-47 |
| Msa1055680 | Msa1182880 | 0.805660 | 1.199227e-49 | -8.615850e-47 |
| Msa0241390 | Msa1182880 | 0.811734 | 6.035503e-51 | -8.615850e-47 |
| Msa1182880 | Msa1253020 | 0.810594 | 1.066830e-50 | -8.615850e-47 |
| Msa1182880 | Msa1311230 | 0.924870 | 3.946792e-90 | -8.615850e-47 |
| Msa1182880 | Msa1374470 | 0.803854 | 2.857991e-49 | -8.615850e-47 |
| Msa1182880 | Msa1385770 | 0.804256 | 2.357765e-49 | -8.615850e-47 |
| Msa1182880 | Msa1409240 | 0.804758 | 1.852300e-49 | -8.615850e-47 |
| Msa1182880 | Msa1432420 | 0.807531 | 4.829952e-50 | -8.615850e-47 |
| Msa1182880 | Msa1440000 | 0.806257 | 8.981415e-50 | -8.615850e-47 |
| Msa1182880 | Msa1444740 | 0.800640 | 1.311118e-48 | -8.615850e-47 |
| Msa0484720 | Msa1182880 | 0.834909 | 2.282120e-56 | -8.615850e-47 |
| Msa0548240 | Msa1182880 | 0.815301 | 9.915566e-52 | -8.615850e-47 |
| Msa0971020 | Msa1182880 | 0.804622 | 1.977683e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1182880 | MtrunA17_Chr8g0338581 | 97.619 | 168 | 4 | 0 | 1 | 168 | 1 | 168 | 3.11e-117 | 328 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1182880 | AT4G00695.4 | 50.485 | 103 | 49 | 2 | 24 | 124 | 12 | 114 | 3.75e-26 | 97.8 |
| Msa1182880 | AT4G00695.3 | 50.485 | 103 | 49 | 2 | 24 | 124 | 12 | 114 | 3.75e-26 | 97.8 |
| Msa1182880 | AT1G80245.2 | 50.000 | 102 | 50 | 1 | 24 | 124 | 12 | 113 | 4.97e-26 | 96.7 |
| Msa1182880 | AT1G80245.7 | 50.000 | 102 | 50 | 1 | 24 | 124 | 12 | 113 | 4.97e-26 | 96.7 |
| Msa1182880 | AT1G80245.1 | 50.000 | 102 | 50 | 1 | 24 | 124 | 12 | 113 | 4.97e-26 | 96.7 |
| Msa1182880 | AT1G80245.3 | 50.000 | 102 | 50 | 1 | 24 | 124 | 12 | 113 | 4.97e-26 | 96.7 |
| Msa1182880 | AT4G00695.1 | 50.485 | 103 | 49 | 2 | 24 | 124 | 12 | 114 | 5.16e-26 | 96.7 |
| Msa1182880 | AT4G00695.2 | 50.485 | 103 | 49 | 2 | 24 | 124 | 12 | 114 | 5.16e-26 | 96.7 |
| Msa1182880 | AT4G00695.5 | 50.485 | 103 | 49 | 2 | 24 | 124 | 12 | 114 | 5.16e-26 | 96.7 |
Find 51 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAGGCGGGACTCGAATTT+AGG | 0.200940 | 8_1:+18043047 | None:intergenic |
| ATGGATAGGTTGTAAGAATT+TGG | 0.227310 | 8_1:-18040694 | Msa1182880:CDS |
| AATCATTGAATTATGAATAA+AGG | 0.269151 | 8_1:-18042702 | Msa1182880:exon |
| TATACATACCCTTGGAGAAT+TGG | 0.327914 | 8_1:+18039568 | None:intergenic |
| GGGAGAGGGTGAACTGTATA+AGG | 0.341805 | 8_1:+18038362 | None:intergenic |
| AGAGGCGGGACTCGAATTTA+GGG | 0.345138 | 8_1:+18043048 | None:intergenic |
| GCAGTAGATTTCACCATATC+TGG | 0.347004 | 8_1:+18039682 | None:intergenic |
| TTTACTGATAGAAGAGAAAA+GGG | 0.348373 | 8_1:+18043113 | None:intergenic |
| TCAATTAAAGCAAAGAGTTC+AGG | 0.349489 | 8_1:-18042729 | Msa1182880:five_prime_UTR |
| CGCATCTCTTGTACCAGATA+TGG | 0.369462 | 8_1:-18039695 | Msa1182880:CDS |
| GTTTAAAATTATTCTCTTCA+AGG | 0.378418 | 8_1:-18038302 | Msa1182880:CDS |
| ATTTGATAGATGTCAATATC+AGG | 0.381970 | 8_1:+18038052 | None:intergenic |
| GAGACTTACAATTTCAGATT+CGG | 0.388675 | 8_1:+18042587 | None:intergenic |
| AGTTACCCGCCTCATCCATT+TGG | 0.398642 | 8_1:-18043009 | Msa1182880:five_prime_UTR |
| TTAGTTACTTCCTATATCAA+TGG | 0.406551 | 8_1:-18038101 | Msa1182880:three_prime_UTR |
| AAATGAATGTCCATTGATAT+AGG | 0.416944 | 8_1:+18038091 | None:intergenic |
| TGCTTCTTTCGTTTGGGAGA+GGG | 0.420868 | 8_1:+18038348 | None:intergenic |
| CAATGGCTCTAAGCATCTTA+AGG | 0.428592 | 8_1:+18040658 | None:intergenic |
| ATGCGTCGACGAACTCCAAA+TGG | 0.438753 | 8_1:+18042994 | None:intergenic |
| AAAAGTCTATAAGAAAAGAT+TGG | 0.454041 | 8_1:-18042679 | Msa1182880:CDS |
| CTTAAGATGCTTAGAGCCAT+TGG | 0.457826 | 8_1:-18040657 | Msa1182880:intron |
| CATGTGTATATTAGCCAATA+AGG | 0.471832 | 8_1:+18038203 | None:intergenic |
| TTGCTTCTTTCGTTTGGGAG+AGG | 0.474026 | 8_1:+18038347 | None:intergenic |
| AGAAGAGAAAGAAGAAGAGA+TGG | 0.476328 | 8_1:+18043141 | None:intergenic |
| CTAGGGTTCAAGATGTGGAT+TGG | 0.488800 | 8_1:-18042623 | Msa1182880:CDS |
| GAAAATGTTGATAATTAAGC+GGG | 0.490779 | 8_1:-18040721 | Msa1182880:CDS |
| TGAAAATGTTGATAATTAAG+CGG | 0.503682 | 8_1:-18040722 | Msa1182880:CDS |
| TGATAAAATTACTGAGACTA+GGG | 0.512323 | 8_1:-18042640 | Msa1182880:CDS |
| CCTCGTTGTTACAGTTCAGT+AGG | 0.513300 | 8_1:+18039641 | None:intergenic |
| AAAATATAGGCACTTCAGTA+AGG | 0.521267 | 8_1:+18038253 | None:intergenic |
| AGTAGTTTCAGCAAATATGT+TGG | 0.529356 | 8_1:-18038130 | Msa1182880:three_prime_UTR |
| TGAGACTAGGGTTCAAGATG+TGG | 0.532204 | 8_1:-18042628 | Msa1182880:CDS |
| GAGCAACATGTGAGAGAGGC+GGG | 0.540609 | 8_1:+18043034 | None:intergenic |
| GGCACTTCAGTAAGGAGGAT+GGG | 0.551297 | 8_1:+18038261 | None:intergenic |
| TGATAATTAAGCGGGCAGAA+TGG | 0.576973 | 8_1:-18040713 | Msa1182880:CDS |
| GATATACAACCAATTCTCCA+AGG | 0.584555 | 8_1:-18039577 | Msa1182880:CDS |
| CGACGAACTCCAAATGGATG+AGG | 0.587496 | 8_1:+18043000 | None:intergenic |
| AGGCACTTCAGTAAGGAGGA+TGG | 0.587678 | 8_1:+18038260 | None:intergenic |
| ATTAAGCGGGCAGAATGGAT+AGG | 0.595837 | 8_1:-18040708 | Msa1182880:CDS |
| GAAGAGCTAAGTACAAGTGT+TGG | 0.600284 | 8_1:-18039604 | Msa1182880:CDS |
| AAAACTTAGGAATATAAGAG+AGG | 0.600950 | 8_1:-18043090 | Msa1182880:five_prime_UTR |
| GTGATAAAATTACTGAGACT+AGG | 0.604234 | 8_1:-18042641 | Msa1182880:CDS |
| GATGGAAAATCTCAAAGCAG+AGG | 0.605458 | 8_1:-18039725 | Msa1182880:CDS |
| GAACTCCAAATGGATGAGGC+GGG | 0.610948 | 8_1:+18043004 | None:intergenic |
| CGAACTCCAAATGGATGAGG+CGG | 0.624911 | 8_1:+18043003 | None:intergenic |
| CTTAGAGCAACATGTGAGAG+AGG | 0.638024 | 8_1:+18043030 | None:intergenic |
| ATATAGGCACTTCAGTAAGG+AGG | 0.643100 | 8_1:+18038256 | None:intergenic |
| AGAGCAACATGTGAGAGAGG+CGG | 0.649017 | 8_1:+18043033 | None:intergenic |
| ATATACAACCAATTCTCCAA+GGG | 0.656648 | 8_1:-18039576 | Msa1182880:intron |
| AGAGGGTGAACTGTATAAGG+AGG | 0.665742 | 8_1:+18038365 | None:intergenic |
| CCTACTGAACTGTAACAACG+AGG | 0.770769 | 8_1:-18039641 | Msa1182880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTAATCTATAACAAA+CGG | + | chr8_1:18041731-18041750 | None:intergenic | 10.0% |
| !!! | TATAATCTCTAAATTATTTT+AGG | + | chr8_1:18041766-18041785 | None:intergenic | 10.0% |
| !!! | AAAAAATAGATTTTTTTTAG+AGG | + | chr8_1:18041950-18041969 | None:intergenic | 10.0% |
| !!! | ATTAAAATAAAAAGCATAAT+TGG | + | chr8_1:18042779-18042798 | None:intergenic | 10.0% |
| !! | TGTAAGTTAACAAATAAAAA+GGG | + | chr8_1:18038415-18038434 | None:intergenic | 15.0% |
| !! | TTGTAAGTTAACAAATAAAA+AGG | + | chr8_1:18038416-18038435 | None:intergenic | 15.0% |
| !! | AATCATTGAATTATGAATAA+AGG | - | chr8_1:18038481-18038500 | Msa1182880:intron | 15.0% |
| !!! | AATATTTTTATGTTCTCTTT+TGG | - | chr8_1:18040129-18040148 | Msa1182880:intron | 15.0% |
| !! | AGTAACTAGTTATTATAAAT+TGG | - | chr8_1:18040249-18040268 | Msa1182880:intron | 15.0% |
| !! | AAGAATAATAAATGTTGTAT+TGG | + | chr8_1:18040683-18040702 | None:intergenic | 15.0% |
| !!! | TTTTATCCATCTATTTTTTA+CGG | - | chr8_1:18040939-18040958 | Msa1182880:intron | 15.0% |
| !! | TAATATTTCATAATGTTCTT+TGG | - | chr8_1:18041070-18041089 | Msa1182880:intron | 15.0% |
| !!! | AGATTTAGAATTGAATTTAA+TGG | - | chr8_1:18041298-18041317 | Msa1182880:intron | 15.0% |
| !!! | TATTTTAATCTATAACAAAC+GGG | + | chr8_1:18041730-18041749 | None:intergenic | 15.0% |
| !!! | AACAAATAATTTAGTTTGTT+TGG | - | chr8_1:18041856-18041875 | Msa1182880:intron | 15.0% |
| !! | TATAAACATTAACATCAATT+GGG | - | chr8_1:18042690-18042709 | Msa1182880:CDS | 15.0% |
| !! | TTCTATCAGTAAAAAAACTT+AGG | - | chr8_1:18038080-18038099 | Msa1182880:three_prime_UTR | 20.0% |
| !! | TAAGTTAACAAATAAAAAGG+GGG | + | chr8_1:18038413-18038432 | None:intergenic | 20.0% |
| !! | GTAAGTTAACAAATAAAAAG+GGG | + | chr8_1:18038414-18038433 | None:intergenic | 20.0% |
| !! | AAAAGTCTATAAGAAAAGAT+TGG | - | chr8_1:18038504-18038523 | Msa1182880:intron | 20.0% |
| !! | ATAAGTTGTTTATCTAAACA+CGG | + | chr8_1:18038874-18038893 | None:intergenic | 20.0% |
| !! | TATCTTATTGAAAATAGCTT+AGG | - | chr8_1:18039029-18039048 | Msa1182880:intron | 20.0% |
| !!! | AGATTTTGAAATTAATGAGT+TGG | - | chr8_1:18039413-18039432 | Msa1182880:intron | 20.0% |
| !! | TTCTATCATAAACCATATTT+CGG | + | chr8_1:18039440-18039459 | None:intergenic | 20.0% |
| !!! | ATAGATTTGCTGTTATATTT+TGG | - | chr8_1:18039993-18040012 | Msa1182880:intron | 20.0% |
| !!! | TAGATTTGCTGTTATATTTT+GGG | - | chr8_1:18039994-18040013 | Msa1182880:intron | 20.0% |
| !!! | TATTGTTATTTCATGTTTTG+AGG | - | chr8_1:18040054-18040073 | Msa1182880:intron | 20.0% |
| !! | CTAGTTATTATAAATTGGTT+TGG | - | chr8_1:18040254-18040273 | Msa1182880:intron | 20.0% |
| !!! | CTAATTTTTTGTTTTCATCT+TGG | - | chr8_1:18040368-18040387 | Msa1182880:intron | 20.0% |
| !!! | TGAAAATGTTGATAATTAAG+CGG | - | chr8_1:18040461-18040480 | Msa1182880:intron | 20.0% |
| !! | TCCACTAACTATAATTAATA+AGG | - | chr8_1:18040751-18040770 | Msa1182880:intron | 20.0% |
| !! | CCACTAACTATAATTAATAA+GGG | - | chr8_1:18040752-18040771 | Msa1182880:intron | 20.0% |
| !!! | ATTAATAGTGTTGATTTCAA+TGG | + | chr8_1:18040804-18040823 | None:intergenic | 20.0% |
| !! | ACTATTAGCTAGATAATATA+TGG | - | chr8_1:18041369-18041388 | Msa1182880:intron | 20.0% |
| !! | GATATTGTATATTGTCTTAT+TGG | - | chr8_1:18041689-18041708 | Msa1182880:intron | 20.0% |
| !!! | TTTTTAAAAGCTGTAACAAA+CGG | - | chr8_1:18042035-18042054 | Msa1182880:intron | 20.0% |
| !! | CTATAAACATTAACATCAAT+TGG | - | chr8_1:18042689-18042708 | Msa1182880:CDS | 20.0% |
| !! | ATAAACATTAACATCAATTG+GGG | - | chr8_1:18042691-18042710 | Msa1182880:CDS | 20.0% |
| !!! | GTTTAAAATTATTCTCTTCA+AGG | - | chr8_1:18042881-18042900 | Msa1182880:intron | 20.0% |
| ! | TTTACTGATAGAAGAGAAAA+GGG | + | chr8_1:18038073-18038092 | None:intergenic | 25.0% |
| !! | TTTTACTGATAGAAGAGAAA+AGG | + | chr8_1:18038074-18038093 | None:intergenic | 25.0% |
| ! | AAAACTTAGGAATATAAGAG+AGG | - | chr8_1:18038093-18038112 | Msa1182880:three_prime_UTR | 25.0% |
| !! | AATGTCTAATTTTCAGTTGT+GGG | + | chr8_1:18038346-18038365 | None:intergenic | 25.0% |
| !! | AAATGTCTAATTTTCAGTTG+TGG | + | chr8_1:18038347-18038366 | None:intergenic | 25.0% |
| !! | AAGATTGGAAACTTTTATTG+AGG | - | chr8_1:18038519-18038538 | Msa1182880:intron | 25.0% |
| !! | AGATTGGAAACTTTTATTGA+GGG | - | chr8_1:18038520-18038539 | Msa1182880:intron | 25.0% |
| ! | TGATAAAATTACTGAGACTA+GGG | - | chr8_1:18038543-18038562 | Msa1182880:intron | 25.0% |
| ! | ACAGCTTATTCATATTTCAT+AGG | + | chr8_1:18038934-18038953 | None:intergenic | 25.0% |
| ! | TGCTAGAAAATTCATTAGTA+TGG | - | chr8_1:18039170-18039189 | Msa1182880:intron | 25.0% |
| ! | AATGACAATATTAGAGAGTT+TGG | - | chr8_1:18039217-18039236 | Msa1182880:intron | 25.0% |
| ! | ATGACAATATTAGAGAGTTT+GGG | - | chr8_1:18039218-18039237 | Msa1182880:intron | 25.0% |
| ! | AAACTAGAAGAGAAACTATT+AGG | - | chr8_1:18039388-18039407 | Msa1182880:intron | 25.0% |
| ! | TGGTTTATGATAGAATTTGA+TGG | - | chr8_1:18039445-18039464 | Msa1182880:intron | 25.0% |
| ! | TTGTAATCTAGAAGTAATGA+AGG | - | chr8_1:18039556-18039575 | Msa1182880:intron | 25.0% |
| ! | TGTAATCTAGAAGTAATGAA+GGG | - | chr8_1:18039557-18039576 | Msa1182880:intron | 25.0% |
| ! | CAAAATTATCAGTAGAACAT+TGG | + | chr8_1:18039621-18039640 | None:intergenic | 25.0% |
| !! | TGTATGTTTTGTGAATATCA+AGG | - | chr8_1:18039669-18039688 | Msa1182880:CDS | 25.0% |
| ! | TTGGGATAAAATTGCATATA+TGG | - | chr8_1:18040012-18040031 | Msa1182880:intron | 25.0% |
| ! | GATAAAATTGCATATATGGA+TGG | - | chr8_1:18040016-18040035 | Msa1182880:intron | 25.0% |
| ! | TTTATAAACGAGAAGAGAAT+AGG | + | chr8_1:18040192-18040211 | None:intergenic | 25.0% |
| !!! | GAAAATGTTGATAATTAAGC+GGG | - | chr8_1:18040462-18040481 | Msa1182880:intron | 25.0% |
| ! | GACAAAGAAGTTTATAAAAG+AGG | + | chr8_1:18040634-18040653 | None:intergenic | 25.0% |
| !! | GTTGTATTGGTATTGTAAAA+GGG | + | chr8_1:18040670-18040689 | None:intergenic | 25.0% |
| !! | TGTTGTATTGGTATTGTAAA+AGG | + | chr8_1:18040671-18040690 | None:intergenic | 25.0% |
| ! | CCCTTATTAATTATAGTTAG+TGG | + | chr8_1:18040755-18040774 | None:intergenic | 25.0% |
| !! | GAGTATAATGGTATTTTGTT+TGG | - | chr8_1:18040874-18040893 | Msa1182880:intron | 25.0% |
| ! | AATCAATTCTTGAAGTACAT+GGG | + | chr8_1:18041046-18041065 | None:intergenic | 25.0% |
| ! | TAATCAATTCTTGAAGTACA+TGG | + | chr8_1:18041047-18041066 | None:intergenic | 25.0% |
| ! | CAATATTTCGTAATCATTGA+AGG | - | chr8_1:18041134-18041153 | Msa1182880:intron | 25.0% |
| ! | AGCTAGATAATATATGGTTA+TGG | - | chr8_1:18041375-18041394 | Msa1182880:intron | 25.0% |
| ! | CTCAATAAAGCTATAACAAA+CGG | - | chr8_1:18042107-18042126 | Msa1182880:intron | 25.0% |
| ! | TCAATAAAGCTATAACAAAC+GGG | - | chr8_1:18042108-18042127 | Msa1182880:intron | 25.0% |
| !! | AATTGATAGCTAAATTCAAG+TGG | + | chr8_1:18042263-18042282 | None:intergenic | 25.0% |
| !! | TTTGGTCTCTTCTTTTTATA+TGG | + | chr8_1:18042318-18042337 | None:intergenic | 25.0% |
| ! | TTAGTTACTTCCTATATCAA+TGG | - | chr8_1:18043082-18043101 | Msa1182880:five_prime_UTR | 25.0% |
| ! | AAATGAATGTCCATTGATAT+AGG | + | chr8_1:18043095-18043114 | None:intergenic | 25.0% |
| ! | ATTTGATAGATGTCAATATC+AGG | + | chr8_1:18043134-18043153 | None:intergenic | 25.0% |
| GAAGACAATATGTGATATGA+GGG | + | chr8_1:18038244-18038263 | None:intergenic | 30.0% | |
| TGAAGACAATATGTGATATG+AGG | + | chr8_1:18038245-18038264 | None:intergenic | 30.0% | |
| TTGAATGAGACAACAAAGAA+TGG | + | chr8_1:18038282-18038301 | None:intergenic | 30.0% | |
| ATTCAATTGAACTTCACTAG+TGG | - | chr8_1:18038296-18038315 | Msa1182880:CDS | 30.0% | |
| ! | CATTTTTCCTTTCTTTCCTT+CGG | - | chr8_1:18038362-18038381 | Msa1182880:CDS | 30.0% |
| TCAATTAAAGCAAAGAGTTC+AGG | - | chr8_1:18038454-18038473 | Msa1182880:intron | 30.0% | |
| GTGATAAAATTACTGAGACT+AGG | - | chr8_1:18038542-18038561 | Msa1182880:intron | 30.0% | |
| GAGACTTACAATTTCAGATT+CGG | + | chr8_1:18038599-18038618 | None:intergenic | 30.0% | |
| CATTATATTGAAAACGTGTC+TGG | - | chr8_1:18038677-18038696 | Msa1182880:intron | 30.0% | |
| ! | GCTGCTTTCATAAATTATGT+TGG | - | chr8_1:18039005-18039024 | Msa1182880:intron | 30.0% |
| !! | TCACTTTAAAATAAGCTACC+CGG | - | chr8_1:18039095-18039114 | Msa1182880:intron | 30.0% |
| ! | AAAATAGTCTTAGGTGGTTT+GGG | - | chr8_1:18039269-18039288 | Msa1182880:intron | 30.0% |
| ! | CACCTATAGATTTTGTAGTA+AGG | - | chr8_1:18039310-18039329 | Msa1182880:intron | 30.0% |
| CTCCTTACTACAAAATCTAT+AGG | + | chr8_1:18039315-18039334 | None:intergenic | 30.0% | |
| GTAGAACATTGGATAAACAA+GGG | + | chr8_1:18039610-18039629 | None:intergenic | 30.0% | |
| AGTAGAACATTGGATAAACA+AGG | + | chr8_1:18039611-18039630 | None:intergenic | 30.0% | |
| CATACAAAACCTTATACCTA+AGG | + | chr8_1:18039655-18039674 | None:intergenic | 30.0% | |
| GATACGCAATTTAGTACAAA+GGG | + | chr8_1:18039747-18039766 | None:intergenic | 30.0% | |
| ! | TTCTTTGCTCATTTTACTTG+TGG | - | chr8_1:18039888-18039907 | Msa1182880:intron | 30.0% |
| ! | ATATATGGATGGATTCTCTT+TGG | - | chr8_1:18040027-18040046 | Msa1182880:intron | 30.0% |
| ! | TATATGGATGGATTCTCTTT+GGG | - | chr8_1:18040028-18040047 | Msa1182880:intron | 30.0% |
| ATAACTAAACTAGCAATGAC+TGG | + | chr8_1:18040340-18040359 | None:intergenic | 30.0% | |
| ! | TCATGCAAGTTCTTATCTTT+TGG | - | chr8_1:18040398-18040417 | Msa1182880:intron | 30.0% |
| ! | GGTATTCACATTTGAAACTT+TGG | - | chr8_1:18040419-18040438 | Msa1182880:intron | 30.0% |
| ATGGATAGGTTGTAAGAATT+TGG | - | chr8_1:18040489-18040508 | Msa1182880:intron | 30.0% | |
| ! | AAAAGCATAAAGCATACCAA+TGG | + | chr8_1:18040545-18040564 | None:intergenic | 30.0% |
| TGATCGAAATGCAACAAATA+GGG | + | chr8_1:18040720-18040739 | None:intergenic | 30.0% | |
| ATGATCGAAATGCAACAAAT+AGG | + | chr8_1:18040721-18040740 | None:intergenic | 30.0% | |
| TTAGTACCCAAATCTCAAAT+GGG | - | chr8_1:18040831-18040850 | Msa1182880:intron | 30.0% | |
| CAAGATAGAAACACAAGATT+TGG | + | chr8_1:18040915-18040934 | None:intergenic | 30.0% | |
| ! | ATCTTGTGTTTCTATCTTGT+TGG | - | chr8_1:18040916-18040935 | Msa1182880:intron | 30.0% |
| AGACAACCGTAAAAAATAGA+TGG | + | chr8_1:18040948-18040967 | None:intergenic | 30.0% | |
| GTTGTATCTTATGAAATCCT+GGG | - | chr8_1:18041092-18041111 | Msa1182880:intron | 30.0% | |
| GTATTTATGCAATAGTCACT+CGG | + | chr8_1:18041194-18041213 | None:intergenic | 30.0% | |
| TAATAGTTACTACATGCAAG+TGG | + | chr8_1:18041356-18041375 | None:intergenic | 30.0% | |
| ATATACAACCAATTCTCCAA+GGG | - | chr8_1:18041607-18041626 | Msa1182880:intron | 30.0% | |
| ! | TCTTATTGGTTGTCTGATTT+AGG | - | chr8_1:18041703-18041722 | Msa1182880:intron | 30.0% |
| ! | CTTATTGGTTGTCTGATTTA+GGG | - | chr8_1:18041704-18041723 | Msa1182880:intron | 30.0% |
| TTTAGAGGAGAGAGAAAATA+TGG | + | chr8_1:18041935-18041954 | None:intergenic | 30.0% | |
| AATGTGCAAATTATTGTCCA+TGG | - | chr8_1:18042136-18042155 | Msa1182880:intron | 30.0% | |
| ATTGTCCATGGATATATCTA+TGG | - | chr8_1:18042148-18042167 | Msa1182880:intron | 30.0% | |
| ATACTCCATAGATATATCCA+TGG | + | chr8_1:18042156-18042175 | None:intergenic | 30.0% | |
| ATGGATATATCTATGGAGTA+TGG | - | chr8_1:18042155-18042174 | Msa1182880:intron | 30.0% | |
| CTAGAGCTATATTACCAATA+TGG | - | chr8_1:18042187-18042206 | Msa1182880:intron | 30.0% | |
| CATATTCTCGATATCCATAT+TGG | + | chr8_1:18042204-18042223 | None:intergenic | 30.0% | |
| !! | ATATGGTTCTAAACTTCTAG+TGG | + | chr8_1:18042301-18042320 | None:intergenic | 30.0% |
| TTAGTTTCAAAGCAAACAAG+GGG | + | chr8_1:18042501-18042520 | None:intergenic | 30.0% | |
| CTTAGTTTCAAAGCAAACAA+GGG | + | chr8_1:18042502-18042521 | None:intergenic | 30.0% | |
| TCTTAGTTTCAAAGCAAACA+AGG | + | chr8_1:18042503-18042522 | None:intergenic | 30.0% | |
| !!! | AGCATTTCTTGACGTTTTTT+CGG | + | chr8_1:18042556-18042575 | None:intergenic | 30.0% |
| TTCACACCAACTATAGATTA+CGG | + | chr8_1:18042581-18042600 | None:intergenic | 30.0% | |
| ! | ACTTTTTGCTTCTTTCGTTT+GGG | + | chr8_1:18042844-18042863 | None:intergenic | 30.0% |
| ! | AACTTTTTGCTTCTTTCGTT+TGG | + | chr8_1:18042845-18042864 | None:intergenic | 30.0% |
| AAAATATAGGCACTTCAGTA+AGG | + | chr8_1:18042933-18042952 | None:intergenic | 30.0% | |
| ! | TGTTTCTGCAGCAAAAATAT+AGG | + | chr8_1:18042946-18042965 | None:intergenic | 30.0% |
| CATGTGTATATTAGCCAATA+AGG | + | chr8_1:18042983-18043002 | None:intergenic | 30.0% | |
| AGTAGTTTCAGCAAATATGT+TGG | - | chr8_1:18043053-18043072 | Msa1182880:five_prime_UTR | 30.0% | |
| AGAAGAGAAAGAAGAAGAGA+TGG | + | chr8_1:18038045-18038064 | None:intergenic | 35.0% | |
| !! | AAAAGCTTTAAAGCTCAACC+GGG | + | chr8_1:18039116-18039135 | None:intergenic | 35.0% |
| !! | CAAAAGCTTTAAAGCTCAAC+CGG | + | chr8_1:18039117-18039136 | None:intergenic | 35.0% |
| !! | AGATGGTGGAAAATAGTCTT+AGG | - | chr8_1:18039260-18039279 | Msa1182880:intron | 35.0% |
| ! | GAAAATAGTCTTAGGTGGTT+TGG | - | chr8_1:18039268-18039287 | Msa1182880:intron | 35.0% |
| AGTAAGGAGAGTAGATCAAA+TGG | - | chr8_1:18039326-18039345 | Msa1182880:intron | 35.0% | |
| ! | TAATGAGTTGGACCGAAATA+TGG | - | chr8_1:18039425-18039444 | Msa1182880:intron | 35.0% |
| ! | AAGTCTTTTCCCAATAAGTG+GGG | + | chr8_1:18039494-18039513 | None:intergenic | 35.0% |
| ! | CAAGTCTTTTCCCAATAAGT+GGG | + | chr8_1:18039495-18039514 | None:intergenic | 35.0% |
| !! | TTTTGTGAGCTACTTTCCTT+AGG | - | chr8_1:18039636-18039655 | Msa1182880:CDS | 35.0% |
| ! | AGCTACTTTCCTTAGGTATA+AGG | - | chr8_1:18039643-18039662 | Msa1182880:CDS | 35.0% |
| CGATACGCAATTTAGTACAA+AGG | + | chr8_1:18039748-18039767 | None:intergenic | 35.0% | |
| TTGTACTAAATTGCGTATCG+CGG | - | chr8_1:18039748-18039767 | Msa1182880:intron | 35.0% | |
| TCTATAGCGCTGTAATATAG+AGG | + | chr8_1:18039797-18039816 | None:intergenic | 35.0% | |
| TTGACGACACTAGTGAATAT+TGG | - | chr8_1:18039834-18039853 | Msa1182880:intron | 35.0% | |
| AAAAATTGCTCCATGGTGAA+GGG | + | chr8_1:18039870-18039889 | None:intergenic | 35.0% | |
| AGCAAAGAAAAATTGCTCCA+TGG | + | chr8_1:18039877-18039896 | None:intergenic | 35.0% | |
| AGAAATGCCAATGATGTCAT+GGG | - | chr8_1:18039968-18039987 | Msa1182880:intron | 35.0% | |
| TCTATATCCCATGACATCAT+TGG | + | chr8_1:18039978-18039997 | None:intergenic | 35.0% | |
| ! | ATATGGATGGATTCTCTTTG+GGG | - | chr8_1:18040029-18040048 | Msa1182880:intron | 35.0% |
| ! | ATCTCTCAGAGTATTATCAG+TGG | + | chr8_1:18040089-18040108 | None:intergenic | 35.0% |
| !! | TCTCTTTTGGTGTACTTTGT+AGG | - | chr8_1:18040142-18040161 | Msa1182880:intron | 35.0% |
| !! | TGGTTTGGTAATAGTGTATG+TGG | - | chr8_1:18040269-18040288 | Msa1182880:intron | 35.0% |
| ! | GGTTTGGTAATAGTGTATGT+GGG | - | chr8_1:18040270-18040289 | Msa1182880:intron | 35.0% |
| ! | TTCACATTTGAAACTTTGGC+AGG | - | chr8_1:18040423-18040442 | Msa1182880:intron | 35.0% |
| AATTTCAAATGTACTCCCTC+CGG | - | chr8_1:18040594-18040613 | Msa1182880:intron | 35.0% | |
| ! | AACAAATAGGGGTATGTTAG+TGG | + | chr8_1:18040708-18040727 | None:intergenic | 35.0% |
| GATCGAAATGCAACAAATAG+GGG | + | chr8_1:18040719-18040738 | None:intergenic | 35.0% | |
| ! | CATTTGAGATTTGGGTACTA+AGG | + | chr8_1:18040832-18040851 | None:intergenic | 35.0% |
| CTTAGTACCCAAATCTCAAA+TGG | - | chr8_1:18040830-18040849 | Msa1182880:intron | 35.0% | |
| GGTTGTATCTTATGAAATCC+TGG | - | chr8_1:18041091-18041110 | Msa1182880:intron | 35.0% | |
| GCATAAATACATTGAACTGC+TGG | - | chr8_1:18041204-18041223 | Msa1182880:intron | 35.0% | |
| CAATTTGTGCAGTACAAATC+AGG | + | chr8_1:18041257-18041276 | None:intergenic | 35.0% | |
| AACTCTTACTATCATGTGCA+TGG | - | chr8_1:18041322-18041341 | Msa1182880:intron | 35.0% | |
| GATATACAACCAATTCTCCA+AGG | - | chr8_1:18041606-18041625 | Msa1182880:intron | 35.0% | |
| TATACATACCCTTGGAGAAT+TGG | + | chr8_1:18041618-18041637 | None:intergenic | 35.0% | |
| ! | GAATATGATCCATCTTTTCG+TGG | - | chr8_1:18042217-18042236 | Msa1182880:intron | 35.0% |
| ! | ACTGAAAGACTTGTTTGCTT+TGG | + | chr8_1:18042336-18042355 | None:intergenic | 35.0% |
| AAAGGAACAGAAAAGATGGA+TGG | + | chr8_1:18042459-18042478 | None:intergenic | 35.0% | |
| TAGTTTCAAAGCAAACAAGG+GGG | + | chr8_1:18042500-18042519 | None:intergenic | 35.0% | |
| TGCTTACCGTAATCTATAGT+TGG | - | chr8_1:18042572-18042591 | Msa1182880:intron | 35.0% | |
| ! | CTGATTTTCTGTGACCTTAT+TGG | - | chr8_1:18042966-18042985 | Msa1182880:intron | 35.0% |
| GAGACAACAAAGAATGGTTC+TGG | + | chr8_1:18038276-18038295 | None:intergenic | 40.0% | |
| TTCCTTTCTTTCCTTCGGTT+TGG | - | chr8_1:18038367-18038386 | Msa1182880:CDS | 40.0% | |
| !! | CAATAAAAGCACCAAACCGA+AGG | + | chr8_1:18038381-18038400 | None:intergenic | 40.0% |
| TTAAACGTAATCACGCGTGT+TGG | + | chr8_1:18038741-18038760 | None:intergenic | 40.0% | |
| ACTTAGACAAACACGTACAC+CGG | + | chr8_1:18038818-18038837 | None:intergenic | 40.0% | |
| AGTGCATGTCACATCATTGT+TGG | - | chr8_1:18038835-18038854 | Msa1182880:intron | 40.0% | |
| ! | TGTCACATCATTGTTGGTTG+TGG | - | chr8_1:18038841-18038860 | Msa1182880:intron | 40.0% |
| !!! | CGGTTGAGCTTTAAAGCTTT+TGG | - | chr8_1:18039115-18039134 | Msa1182880:intron | 40.0% |
| GCACCTTATAGTAGAGAAGA+TGG | - | chr8_1:18039243-18039262 | Msa1182880:intron | 40.0% | |
| CCACCATCTTCTCTACTATA+AGG | + | chr8_1:18039249-18039268 | None:intergenic | 40.0% | |
| CCTTATAGTAGAGAAGATGG+TGG | - | chr8_1:18039246-18039265 | Msa1182880:intron | 40.0% | |
| ! | TGGTGGAAAATAGTCTTAGG+TGG | - | chr8_1:18039263-18039282 | Msa1182880:intron | 40.0% |
| AAGGAGAGTAGATCAAATGG+AGG | - | chr8_1:18039329-18039348 | Msa1182880:intron | 40.0% | |
| AGTTAGATCAGTAGAGACAG+AGG | - | chr8_1:18039354-18039373 | Msa1182880:intron | 40.0% | |
| ! | CCAAGTCTTTTCCCAATAAG+TGG | + | chr8_1:18039496-18039515 | None:intergenic | 40.0% |
| CCACTTATTGGGAAAAGACT+TGG | - | chr8_1:18039493-18039512 | Msa1182880:intron | 40.0% | |
| ! | GGAAAAGACTTGGTTGTTGT+TGG | - | chr8_1:18039503-18039522 | Msa1182880:intron | 40.0% |
| TACAAAGGGTTGCCAAATAG+CGG | + | chr8_1:18039733-18039752 | None:intergenic | 40.0% | |
| TCACTAGTGTCGTCAAATAG+CGG | + | chr8_1:18039830-18039849 | None:intergenic | 40.0% | |
| AAAATTGCTCCATGGTGAAG+GGG | + | chr8_1:18039869-18039888 | None:intergenic | 40.0% | |
| GAAAAATTGCTCCATGGTGA+AGG | + | chr8_1:18039871-18039890 | None:intergenic | 40.0% | |
| GAGAAATGCCAATGATGTCA+TGG | - | chr8_1:18039967-18039986 | Msa1182880:intron | 40.0% | |
| TGATAATTAAGCGGGCAGAA+TGG | - | chr8_1:18040470-18040489 | Msa1182880:intron | 40.0% | |
| !! | CAATGGCTCTAAGCATCTTA+AGG | + | chr8_1:18040528-18040547 | None:intergenic | 40.0% |
| CTTAAGATGCTTAGAGCCAT+TGG | - | chr8_1:18040526-18040545 | Msa1182880:intron | 40.0% | |
| ! | AGGTGTCCCATTTGAGATTT+GGG | + | chr8_1:18040840-18040859 | None:intergenic | 40.0% |
| TCGTAATCATTGAAGGTCTC+TGG | - | chr8_1:18041141-18041160 | Msa1182880:intron | 40.0% | |
| ATTGAACTGCTGGAGTATGA+AGG | - | chr8_1:18041214-18041233 | Msa1182880:intron | 40.0% | |
| TTGTGCAGTACAAATCAGGA+AGG | + | chr8_1:18041253-18041272 | None:intergenic | 40.0% | |
| ! | TCAAAACAAGTGCTGCGTAA+AGG | + | chr8_1:18041440-18041459 | None:intergenic | 40.0% |
| !!! | TTACGCAGCACTTGTTTTGA+TGG | - | chr8_1:18041440-18041459 | Msa1182880:intron | 40.0% |
| GATGGAAAATCTCAAAGCAG+AGG | - | chr8_1:18041458-18041477 | Msa1182880:intron | 40.0% | |
| GCAGTAGATTTCACCATATC+TGG | + | chr8_1:18041504-18041523 | None:intergenic | 40.0% | |
| GAAGAGCTAAGTACAAGTGT+TGG | - | chr8_1:18041579-18041598 | Msa1182880:intron | 40.0% | |
| GAGCTTAGTATACATACCCT+TGG | + | chr8_1:18041626-18041645 | None:intergenic | 40.0% | |
| ACTTCTTCTCCACGAAAAGA+TGG | + | chr8_1:18042229-18042248 | None:intergenic | 40.0% | |
| GCTTTCAGGAGACAATTCTA+AGG | + | chr8_1:18042376-18042395 | None:intergenic | 40.0% | |
| ACTCTTGTAGTCATGCTTTC+AGG | + | chr8_1:18042390-18042409 | None:intergenic | 40.0% | |
| GTGGAAAGGAACAGAAAAGA+TGG | + | chr8_1:18042463-18042482 | None:intergenic | 40.0% | |
| !!! | TGACGTTTTTTCGGTCACTA+AGG | + | chr8_1:18042547-18042566 | None:intergenic | 40.0% |
| ATCAATTGGGGACAGAGTAA+GGG | - | chr8_1:18042703-18042722 | Msa1182880:exon | 40.0% | |
| CGAAAGAAGCAAAAAGTTGC+TGG | - | chr8_1:18042847-18042866 | Msa1182880:intron | 40.0% | |
| ATATAGGCACTTCAGTAAGG+AGG | + | chr8_1:18042930-18042949 | None:intergenic | 40.0% | |
| CTTAGAGCAACATGTGAGAG+AGG | + | chr8_1:18038156-18038175 | None:intergenic | 45.0% | |
| GTGATATGAGGGAAGAACGA+TGG | + | chr8_1:18038233-18038252 | None:intergenic | 45.0% | |
| CACCAAACCGAAGGAAAGAA+AGG | + | chr8_1:18038372-18038391 | None:intergenic | 45.0% | |
| TGAGACTAGGGTTCAAGATG+TGG | - | chr8_1:18038555-18038574 | Msa1182880:intron | 45.0% | |
| CTAGGGTTCAAGATGTGGAT+TGG | - | chr8_1:18038560-18038579 | Msa1182880:intron | 45.0% | |
| TGTTGGTATCAGACAACCAC+GGG | + | chr8_1:18038724-18038743 | None:intergenic | 45.0% | |
| ! | GTGTTGGTATCAGACAACCA+CGG | + | chr8_1:18038725-18038744 | None:intergenic | 45.0% |
| !! | AATAAGTGGGGTTGGCTACA+TGG | + | chr8_1:18039482-18039501 | None:intergenic | 45.0% |
| ATGTAGCCAACCCCACTTAT+TGG | - | chr8_1:18039481-18039500 | Msa1182880:intron | 45.0% | |
| TGTAGCCAACCCCACTTATT+GGG | - | chr8_1:18039482-18039501 | Msa1182880:intron | 45.0% | |
| ! | CTTTTCCCAATAAGTGGGGT+TGG | + | chr8_1:18039490-18039509 | None:intergenic | 45.0% |
| GAAGTAATGAAGGGAACCTG+TGG | - | chr8_1:18039566-18039585 | Msa1182880:intron | 45.0% | |
| CTAATGCTGCACTTAACCAC+AGG | + | chr8_1:18039585-18039604 | None:intergenic | 45.0% | |
| TAGCGGTTGCAGTAGAACAT+GGG | + | chr8_1:18039716-18039735 | None:intergenic | 45.0% | |
| ATAGCGGTTGCAGTAGAACA+TGG | + | chr8_1:18039717-18039736 | None:intergenic | 45.0% | |
| GTTCTACTGCAACCGCTATT+TGG | - | chr8_1:18039718-18039737 | Msa1182880:CDS | 45.0% | |
| AGTGTATGTGGGTTTGACCA+CGG | - | chr8_1:18040281-18040300 | Msa1182880:intron | 45.0% | |
| GTATATGCGCAAATGTGGAC+TGG | - | chr8_1:18040303-18040322 | Msa1182880:intron | 45.0% | |
| ATTAAGCGGGCAGAATGGAT+AGG | - | chr8_1:18040475-18040494 | Msa1182880:intron | 45.0% | |
| AGAGGACACCTAATTTGAGC+CGG | + | chr8_1:18040616-18040635 | None:intergenic | 45.0% | |
| ! | GAGGTGTCCCATTTGAGATT+TGG | + | chr8_1:18040841-18040860 | None:intergenic | 45.0% |
| ATGGGACACCTCATATGAGA+CGG | - | chr8_1:18040849-18040868 | Msa1182880:intron | 45.0% | |
| ! | TATGAGACGGGGGAGTATAA+TGG | - | chr8_1:18040862-18040881 | Msa1182880:intron | 45.0% |
| ATGAAATCCTGGGTCTATCC+TGG | - | chr8_1:18041102-18041121 | Msa1182880:intron | 45.0% | |
| GAAATATTGCGACACAGTCC+AGG | + | chr8_1:18041123-18041142 | None:intergenic | 45.0% | |
| TATGCAATAGTCACTCGGTC+TGG | + | chr8_1:18041189-18041208 | None:intergenic | 45.0% | |
| CGCATCTCTTGTACCAGATA+TGG | - | chr8_1:18041488-18041507 | Msa1182880:intron | 45.0% | |
| CCTCGTTGTTACAGTTCAGT+AGG | + | chr8_1:18041545-18041564 | None:intergenic | 45.0% | |
| CCTACTGAACTGTAACAACG+AGG | - | chr8_1:18041542-18041561 | Msa1182880:intron | 45.0% | |
| AAAGATGGATGGCAAGAGGA+GGG | + | chr8_1:18042448-18042467 | None:intergenic | 45.0% | |
| AAAAGATGGATGGCAAGAGG+AGG | + | chr8_1:18042449-18042468 | None:intergenic | 45.0% | |
| CAGAAAAGATGGATGGCAAG+AGG | + | chr8_1:18042452-18042471 | None:intergenic | 45.0% | |
| TATCAGCAGTGAGAGTGGAA+AGG | + | chr8_1:18042477-18042496 | None:intergenic | 45.0% | |
| CATCAATTGGGGACAGAGTA+AGG | - | chr8_1:18042702-18042721 | Msa1182880:exon | 45.0% | |
| AGAGGGTGAACTGTATAAGG+AGG | + | chr8_1:18042821-18042840 | None:intergenic | 45.0% | |
| TGCTTCTTTCGTTTGGGAGA+GGG | + | chr8_1:18042838-18042857 | None:intergenic | 45.0% | |
| TTGCTTCTTTCGTTTGGGAG+AGG | + | chr8_1:18042839-18042858 | None:intergenic | 45.0% | |
| AGAGGCGGGACTCGAATTTA+GGG | + | chr8_1:18038138-18038157 | None:intergenic | 50.0% | |
| AGAGCAACATGTGAGAGAGG+CGG | + | chr8_1:18038153-18038172 | None:intergenic | 50.0% | |
| AGTTACCCGCCTCATCCATT+TGG | - | chr8_1:18038174-18038193 | Msa1182880:three_prime_UTR | 50.0% | |
| GAACTCCAAATGGATGAGGC+GGG | + | chr8_1:18038182-18038201 | None:intergenic | 50.0% | |
| CGAACTCCAAATGGATGAGG+CGG | + | chr8_1:18038183-18038202 | None:intergenic | 50.0% | |
| CGACGAACTCCAAATGGATG+AGG | + | chr8_1:18038186-18038205 | None:intergenic | 50.0% | |
| ! | ATGCGTCGACGAACTCCAAA+TGG | + | chr8_1:18038192-18038211 | None:intergenic | 50.0% |
| TTGAAAACGTGTCTGGTGCC+CGG | - | chr8_1:18038684-18038703 | Msa1182880:intron | 50.0% | |
| TCAATGAGCTAGTGCGTGAC+CGG | - | chr8_1:18038796-18038815 | Msa1182880:intron | 50.0% | |
| TGCGTATCGCGGAACAATAG+CGG | - | chr8_1:18039759-18039778 | Msa1182880:intron | 50.0% | |
| CCACATTTGCGCATATACCG+TGG | + | chr8_1:18040301-18040320 | None:intergenic | 50.0% | |
| CCACGGTATATGCGCAAATG+TGG | - | chr8_1:18040298-18040317 | Msa1182880:intron | 50.0% | |
| TACTCCCTCCGGCTCAAATT+AGG | - | chr8_1:18040605-18040624 | Msa1182880:intron | 50.0% | |
| GACACCTAATTTGAGCCGGA+GGG | + | chr8_1:18040612-18040631 | None:intergenic | 50.0% | |
| TGGGACACCTCATATGAGAC+GGG | - | chr8_1:18040850-18040869 | Msa1182880:intron | 50.0% | |
| ATACTCCCCCGTCTCATATG+AGG | + | chr8_1:18040860-18040879 | None:intergenic | 50.0% | |
| TGAAGGTCTCTGGTCTATCC+TGG | - | chr8_1:18041151-18041170 | Msa1182880:intron | 50.0% | |
| TTGGGGACAGAGTAAGGGAA+AGG | - | chr8_1:18042708-18042727 | Msa1182880:exon | 50.0% | |
| TGGGGACAGAGTAAGGGAAA+GGG | - | chr8_1:18042709-18042728 | Msa1182880:exon | 50.0% | |
| GGGAGAGGGTGAACTGTATA+AGG | + | chr8_1:18042824-18042843 | None:intergenic | 50.0% | |
| GGCACTTCAGTAAGGAGGAT+GGG | + | chr8_1:18042925-18042944 | None:intergenic | 50.0% | |
| AGGCACTTCAGTAAGGAGGA+TGG | + | chr8_1:18042926-18042945 | None:intergenic | 50.0% | |
| GAGAGGCGGGACTCGAATTT+AGG | + | chr8_1:18038139-18038158 | None:intergenic | 55.0% | |
| GAGCAACATGTGAGAGAGGC+GGG | + | chr8_1:18038152-18038171 | None:intergenic | 55.0% | |
| TCGACGCATCTGTCTGCAAC+AGG | - | chr8_1:18038203-18038222 | Msa1182880:three_prime_UTR | 55.0% | |
| !! | ACGGGAGAAGTGTTCGACAC+CGG | + | chr8_1:18038706-18038725 | None:intergenic | 55.0% |
| GCGTATCGCGGAACAATAGC+GGG | - | chr8_1:18039760-18039779 | Msa1182880:intron | 55.0% | |
| ATGTGTGTGCCCCTTCACCA+TGG | - | chr8_1:18039857-18039876 | Msa1182880:intron | 55.0% | |
| GGACACCTAATTTGAGCCGG+AGG | + | chr8_1:18040613-18040632 | None:intergenic | 55.0% | |
| GGGACACCTCATATGAGACG+GGG | - | chr8_1:18040851-18040870 | Msa1182880:intron | 55.0% | |
| GGACACCTCATATGAGACGG+GGG | - | chr8_1:18040852-18040871 | Msa1182880:intron | 55.0% | |
| ACACAGTCCAGGATAGACCC+AGG | + | chr8_1:18041112-18041131 | None:intergenic | 55.0% | |
| GTCTGGACACAACACAGTCC+AGG | + | chr8_1:18041172-18041191 | None:intergenic | 55.0% | |
| !! | CGGGAGAAGTGTTCGACACC+GGG | + | chr8_1:18038705-18038724 | None:intergenic | 60.0% |
| ! | GGTGTCGAACACTTCTCCCG+TGG | - | chr8_1:18038705-18038724 | Msa1182880:intron | 60.0% |
| !! | GGGGGTATCAGCAGTGAGAG+TGG | + | chr8_1:18042482-18042501 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 18038033 | 18043172 | 18038033 | ID=Msa1182880;Name=Msa1182880 |
| chr8_1 | mRNA | 18038033 | 18043172 | 18038033 | ID=Msa1182880-mRNA-1;Parent=Msa1182880;Name=Msa1182880-mRNA-1;_AED=0.03;_eAED=0.03;_QI=235|1|1|1|0.75|0.6|5|251|168 |
| chr8_1 | exon | 18038033 | 18038389 | 18038033 | ID=Msa1182880-mRNA-1:exon:6890;Parent=Msa1182880-mRNA-1 |
| chr8_1 | exon | 18039577 | 18039757 | 18039577 | ID=Msa1182880-mRNA-1:exon:6889;Parent=Msa1182880-mRNA-1 |
| chr8_1 | exon | 18040658 | 18040760 | 18040658 | ID=Msa1182880-mRNA-1:exon:6888;Parent=Msa1182880-mRNA-1 |
| chr8_1 | exon | 18042596 | 18042755 | 18042596 | ID=Msa1182880-mRNA-1:exon:6887;Parent=Msa1182880-mRNA-1 |
| chr8_1 | exon | 18042981 | 18043172 | 18042981 | ID=Msa1182880-mRNA-1:exon:6886;Parent=Msa1182880-mRNA-1 |
| chr8_1 | five_prime_UTR | 18042981 | 18043172 | 18042981 | ID=Msa1182880-mRNA-1:five_prime_utr;Parent=Msa1182880-mRNA-1 |
| chr8_1 | five_prime_UTR | 18042713 | 18042755 | 18042713 | ID=Msa1182880-mRNA-1:five_prime_utr;Parent=Msa1182880-mRNA-1 |
| chr8_1 | CDS | 18042596 | 18042712 | 18042596 | ID=Msa1182880-mRNA-1:cds;Parent=Msa1182880-mRNA-1 |
| chr8_1 | CDS | 18040658 | 18040760 | 18040658 | ID=Msa1182880-mRNA-1:cds;Parent=Msa1182880-mRNA-1 |
| chr8_1 | CDS | 18039577 | 18039757 | 18039577 | ID=Msa1182880-mRNA-1:cds;Parent=Msa1182880-mRNA-1 |
| chr8_1 | CDS | 18038284 | 18038389 | 18038284 | ID=Msa1182880-mRNA-1:cds;Parent=Msa1182880-mRNA-1 |
| chr8_1 | three_prime_UTR | 18038033 | 18038283 | 18038033 | ID=Msa1182880-mRNA-1:three_prime_utr;Parent=Msa1182880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
