AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0096030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0096030 MtrunA17_Chr5g0398701 95.231 671 15 4 1 656 1 669 0.0 1305
Msa0096030 MtrunA17_Chr4g0056851 79.940 663 107 7 11 656 116 769 0.0 1107
Msa0096030 MtrunA17_Chr4g0010911 55.380 697 219 9 27 639 5 693 0.0 764
Msa0096030 MtrunA17_Chr4g0067491 51.128 133 37 1 251 355 7 139 5.85e-36 132
Msa0096030 MtrunA17_Chr3g0126071 22.343 367 240 14 179 538 170 498 4.99e-15 78.6
Msa0096030 MtrunA17_Chr4g0051171 21.705 387 253 13 40 395 34 401 1.03e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0096030 AT1G12360.1 71.687 664 159 7 13 656 12 666 0.0 985
Msa0096030 AT4G12120.1 62.424 660 217 8 16 656 15 662 0.0 853
Msa0096030 AT1G02010.1 63.142 662 199 10 15 649 17 660 0.0 833
Msa0096030 AT1G02010.2 61.480 662 197 11 15 649 17 647 0.0 824
Msa0096030 AT1G02010.4 60.405 692 199 10 15 649 17 690 0.0 821
Msa0096030 AT1G02010.5 63.003 646 194 10 31 649 1 628 0.0 808
Msa0096030 AT1G02010.3 62.207 598 181 10 15 585 17 596 0.0 753
Msa0096030 AT1G02010.6 63.514 518 159 7 145 649 11 511 0.0 658
Msa0096030 AT1G77140.1 22.265 521 342 19 42 538 19 500 3.22e-18 89.0

Find 150 sgRNAs with CRISPR-Local

Find 615 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGTAATTTGCTTGAAATTT+TGG 0.120193 1_3:+1464491 None:intergenic
TCCCATTGCTGCAGTTAATT+TGG 0.139784 1_3:-1454834 Msa0096030:three_prime_UTR
CATAACCTGTACCTCTATTA+TGG 0.176535 1_3:+1456922 None:intergenic
AGAGCATTAGAGGATCTATT+TGG 0.212778 1_3:-1460383 Msa0096030:CDS
GGAGTCAGGACTGCGGGAAC+TGG 0.293146 1_3:-1457621 Msa0096030:CDS
CAAAGCTTGCTGCTGGAGTC+TGG 0.293765 1_3:-1460090 Msa0096030:CDS
ACATACCTTCCAAGTTGATT+TGG 0.296521 1_3:+1464267 None:intergenic
TGAGAGAAAAGAAGTTCTTT+TGG 0.301336 1_3:-1459686 Msa0096030:CDS
AAAACTAATTCTCTGGAAAT+AGG 0.306579 1_3:+1461373 None:intergenic
GTCTTCTTGATCCAGCTTGC+AGG 0.306762 1_3:-1457665 Msa0096030:intron
GAAAACTAAATAAATTATTC+TGG 0.306811 1_3:+1454728 None:intergenic
CTGAATAGGGAAATTATTCT+AGG 0.309246 1_3:-1455117 Msa0096030:CDS
GTGTCATGATTTGCTGAATA+TGG 0.312135 1_3:-1459846 Msa0096030:CDS
GTCTCAGTCTGAGGAAAATT+AGG 0.327470 1_3:+1460037 None:intergenic
CGTCACATACTTCCTGTATA+AGG 0.331884 1_3:+1461497 None:intergenic
CGACTATTGTACATCATATC+TGG 0.332409 1_3:+1454912 None:intergenic
CACGAGAAATCAACTGTCTA+AGG 0.336896 1_3:-1456624 Msa0096030:CDS
TAGAAATTACCTTTACCTTC+TGG 0.353031 1_3:+1457017 None:intergenic
AAACGTTTGACTGGTGCTTT+CGG 0.359481 1_3:-1457055 Msa0096030:CDS
CAAGCGTGTATGTTAATTCA+TGG 0.365375 1_3:+1454706 None:intergenic
ACTCCAGCAGCAAGCTTTGT+AGG 0.367263 1_3:+1460094 None:intergenic
AGCTTACTAGAAGGCTGAAT+AGG 0.377664 1_3:-1455131 Msa0096030:CDS
AAATAATGAGAGAGCATTAG+AGG 0.380377 1_3:-1460393 Msa0096030:CDS
ATAACCTGTACCTCTATTAT+GGG 0.393071 1_3:+1456923 None:intergenic
TATTTCCAGAGAATTAGTTT+TGG 0.393323 1_3:-1461371 Msa0096030:CDS
AATGTCCAAAACTAATTCTC+TGG 0.394956 1_3:+1461366 None:intergenic
CTGAGGGTGTCGTCTCGATT+AGG 0.402968 1_3:-1461334 Msa0096030:CDS
AGGACTGCGGGAACTGGGCC+AGG 0.408525 1_3:-1457615 Msa0096030:CDS
AACAGTATCATTAGGGAGTC+AGG 0.409285 1_3:-1457635 Msa0096030:CDS
GCTTACTAGAAGGCTGAATA+GGG 0.411575 1_3:-1455130 Msa0096030:CDS
TTCTAGTGATTTCAAGAAGA+TGG 0.412872 1_3:-1455308 Msa0096030:CDS
GAGCATTAGAGGATCTATTT+GGG 0.412978 1_3:-1460382 Msa0096030:CDS
TATGTCCACTCATGTATTAC+AGG 0.422700 1_3:+1459878 None:intergenic
CTTGTCGGCACGCAGTGATT+CGG 0.429467 1_3:-1455344 Msa0096030:intron
TGTGTTTGCGTCTAGGGACT+TGG 0.431530 1_3:+1460141 None:intergenic
CGACTATTTGTATTCATTGT+CGG 0.433005 1_3:-1455280 Msa0096030:CDS
TGAGAAATTTGACGGAGAAA+AGG 0.436497 1_3:-1457300 Msa0096030:CDS
GTGAATAACTTGAGAATGCT+TGG 0.439454 1_3:-1457097 Msa0096030:CDS
GATATTCAACTCCTTGTGGC+TGG 0.443301 1_3:-1454812 Msa0096030:three_prime_UTR
TTGCCTGTAGGTACTAATAA+TGG 0.444030 1_3:-1462447 Msa0096030:intron
AGTCATTGTGTTTGCGTCTA+GGG 0.444874 1_3:+1460135 None:intergenic
GATTCTGATTCCTCCTCTTA+CGG 0.445513 1_3:-1464526 Msa0096030:CDS
TAGTCATTGTGTTTGCGTCT+AGG 0.448346 1_3:+1460134 None:intergenic
TGGAGGATCATGATCCTGTA+TGG 0.450396 1_3:-1459666 Msa0096030:CDS
TCAGATGTGTTACTTCTCTC+TGG 0.455505 1_3:+1462082 None:intergenic
GAGAAATTTGACGGAGAAAA+GGG 0.455838 1_3:-1457299 Msa0096030:CDS
CACAAATTCAGCATGGTTCA+AGG 0.455901 1_3:-1459489 Msa0096030:intron
ATCAAGACGTACACCAAGTT+GGG 0.456649 1_3:-1456513 Msa0096030:CDS
AATTATTCAAACCTCTGATC+GGG 0.457842 1_3:+1455249 None:intergenic
GGTAGACCTCCGGCCTTGCC+AGG 0.458860 1_3:+1459709 None:intergenic
CTGGAAGGGCTCCCTTATAC+AGG 0.460763 1_3:-1461509 Msa0096030:CDS
GTTCCTACAAAGCTTGCTGC+TGG 0.461493 1_3:-1460097 Msa0096030:CDS
GTAATTGGCGCCACCGTAAG+AGG 0.465993 1_3:+1464513 None:intergenic
TCCAAATTAACTGCAGCAAT+GGG 0.470078 1_3:+1454833 None:intergenic
TGAATAACTTGAGAATGCTT+GGG 0.470800 1_3:-1457096 Msa0096030:CDS
TGATGTAAAGTGCCAGCAAA+AGG 0.472976 1_3:+1456554 None:intergenic
AAACCGCGAGGCTCTGATGA+TGG 0.474037 1_3:-1456488 Msa0096030:CDS
TATTGACAGAACTATTGATC+AGG 0.475763 1_3:-1459999 Msa0096030:intron
GAGTCAGGACTGCGGGAACT+GGG 0.476609 1_3:-1457620 Msa0096030:CDS
CAGGGGATTCCAAATCAACT+TGG 0.480880 1_3:-1464276 Msa0096030:CDS
ATCCAAATTAACTGCAGCAA+TGG 0.482587 1_3:+1454832 None:intergenic
ATGTGTTACTTCTCTCTGGT+TGG 0.485539 1_3:+1462086 None:intergenic
AAATATATAGCATCCATTGT+TGG 0.485606 1_3:+1462116 None:intergenic
GTCACATACTTCCTGTATAA+GGG 0.487146 1_3:+1461498 None:intergenic
TGGCGAAGCTCGAGCCATAC+AGG 0.490327 1_3:+1459652 None:intergenic
CGTCTTGATCTCATTGAATG+AGG 0.494301 1_3:+1456527 None:intergenic
GTTTATCCTGAGAAATTTGA+CGG 0.499699 1_3:-1457308 Msa0096030:CDS
CACGCAGTGATTCGGTGCTT+AGG 0.499930 1_3:-1455336 Msa0096030:intron
GTCAATAATGAGCAACTCGC+AGG 0.502476 1_3:+1460015 None:intergenic
CTTGCCACAAGCTTACTAGA+AGG 0.509619 1_3:-1455140 Msa0096030:CDS
AAAGCTTGCTGCTGGAGTCT+GGG 0.510328 1_3:-1460089 Msa0096030:CDS
TGACATATTCTGCATGAACT+AGG 0.512838 1_3:-1454771 Msa0096030:three_prime_UTR
CGACAAAACTAACCTCTACA+TGG 0.514875 1_3:+1458548 None:intergenic
CTCTGGAAATAGGTGAGCTA+AGG 0.517467 1_3:+1461383 None:intergenic
GCTCTGATGATGGGTATTCA+AGG 0.518562 1_3:-1456478 Msa0096030:intron
TTTATCAGACATGGCTGGAA+GGG 0.518629 1_3:-1461523 Msa0096030:CDS
AAATTATTCAAACCTCTGAT+CGG 0.523929 1_3:+1455248 None:intergenic
CTGCAAGGATAGAACGTCCT+GGG 0.524780 1_3:-1456979 Msa0096030:CDS
AAACAAGATCTTGCTCCACC+TGG 0.525352 1_3:+1457597 None:intergenic
AACAAGGGACTTACAGAAGA+TGG 0.525806 1_3:-1458617 Msa0096030:CDS
TCTAGTGATTTCAAGAAGAT+GGG 0.526090 1_3:-1455307 Msa0096030:CDS
GTTTGATATCCAGAAGGTAA+AGG 0.529190 1_3:-1457026 Msa0096030:CDS
CATTAGGGAGTCAGGACTGC+GGG 0.533800 1_3:-1457627 Msa0096030:CDS
CATGAATTAACATACACGCT+TGG 0.534031 1_3:-1454705 Msa0096030:three_prime_UTR
GCGCTTGTTAATGATTCTTG+CGG 0.538621 1_3:-1457333 Msa0096030:CDS
TTTAAGGTTCCTGGCAAGGC+CGG 0.541852 1_3:-1459718 Msa0096030:intron
CGGTGGCGCAACCCGATCAG+AGG 0.552061 1_3:-1455260 Msa0096030:intron
AACCGCGAGGCTCTGATGAT+GGG 0.553335 1_3:-1456487 Msa0096030:CDS
AGAATATGTCATCAAGTGAC+TGG 0.554525 1_3:+1454783 None:intergenic
AAGGTTCCTGGCAAGGCCGG+AGG 0.557439 1_3:-1459715 Msa0096030:CDS
AATGAAGAGAATAATCGTAA+AGG 0.560472 1_3:-1460359 Msa0096030:CDS
GCTGCAAGGATAGAACGTCC+TGG 0.561595 1_3:-1456980 Msa0096030:CDS
AAGGCAACCGTTACCAACAA+TGG 0.561902 1_3:-1462129 Msa0096030:CDS
TTTGGATATTCAACTCCTTG+TGG 0.561957 1_3:-1454816 Msa0096030:three_prime_UTR
TCAATTTGTTCGCTGTATTG+TGG 0.564959 1_3:+1458583 None:intergenic
GATCAAGACGTACACCAAGT+TGG 0.565011 1_3:-1456514 Msa0096030:CDS
ATAGCATCCATTGTTGGTAA+CGG 0.565143 1_3:+1462122 None:intergenic
AACTCGCAGGTCTCAGTCTG+AGG 0.566951 1_3:+1460028 None:intergenic
CTTGGCAGCACGAAAGCGGA+TGG 0.567144 1_3:+1460159 None:intergenic
TGGACATTAGAAAAGGTCTG+AGG 0.569327 1_3:-1461351 Msa0096030:CDS
GGACATTAGAAAAGGTCTGA+GGG 0.574848 1_3:-1461350 Msa0096030:CDS
AATACCGTGATGAATTGTGC+AGG 0.575005 1_3:+1455075 None:intergenic
TCTGATTCCTCCTCTTACGG+TGG 0.583008 1_3:-1464523 Msa0096030:CDS
AAAGGGTCAGAATTTGATGA+AGG 0.585880 1_3:-1457282 Msa0096030:intron
AATGTCTAACTCATGCAAGA+TGG 0.586916 1_3:-1462405 Msa0096030:CDS
GCAGCACGAAAGCGGATGGA+AGG 0.590832 1_3:+1460163 None:intergenic
ACTGCGGGAACTGGGCCAGG+TGG 0.591719 1_3:-1457612 Msa0096030:CDS
AGTCTGAGGAAAATTAGGTA+TGG 0.591962 1_3:+1460042 None:intergenic
GATTATTACACGAAATGCTA+AGG 0.597429 1_3:-1464309 Msa0096030:CDS
TGCCAGCAAAAGGTGAGCTG+TGG 0.599301 1_3:+1456564 None:intergenic
TCAGCCTTCTAGTAAGCTTG+TGG 0.601262 1_3:+1455136 None:intergenic
GGATTCCAAATCAACTTGGA+AGG 0.607966 1_3:-1464272 Msa0096030:intron
CTATTTGTATTCATTGTCGG+TGG 0.608557 1_3:-1455277 Msa0096030:CDS
TGTTGCATGTTTGAATGCAA+TGG 0.613656 1_3:-1460336 Msa0096030:CDS
GAGGAGCATCATGTCTATGT+CGG 0.615188 1_3:-1464548 Msa0096030:exon
CAAACTCTCCCTCCATGTAG+AGG 0.618973 1_3:-1458560 Msa0096030:intron
GGGACTTGGCAGCACGAAAG+CGG 0.620933 1_3:+1460155 None:intergenic
CTTACATGAAACACCTTCGT+CGG 0.627545 1_3:+1462373 None:intergenic
CAATGAATACAAATAGTCGT+TGG 0.627844 1_3:+1455284 None:intergenic
GAGCTGTGGAAAGTTGCACT+TGG 0.632632 1_3:+1456578 None:intergenic
AAAACTAACCTCTACATGGA+GGG 0.632717 1_3:+1458552 None:intergenic
TCTTAAGTTTGATATCCAGA+AGG 0.643053 1_3:-1457032 Msa0096030:CDS
GAGAAATCAACTGTCTAAGG+AGG 0.645035 1_3:-1456621 Msa0096030:CDS
GGTAGCACGGTTAACAGATG+AGG 0.645727 1_3:-1457131 Msa0096030:CDS
TCATGATTTGCTGAATATGG+AGG 0.647982 1_3:-1459843 Msa0096030:CDS
CTACATCAGCAATATGAGCA+TGG 0.648526 1_3:+1459632 None:intergenic
GCACTTGGATCATTCAAACA+TGG 0.648843 1_3:+1456593 None:intergenic
TTGCTCCTGTAATACATGAG+TGG 0.652791 1_3:-1459883 Msa0096030:CDS
GAATAACTTGAGAATGCTTG+GGG 0.654755 1_3:-1457095 Msa0096030:CDS
ATTGGCGCCACCGTAAGAGG+AGG 0.656163 1_3:+1464516 None:intergenic
TCGATTAGGTGCATTAAGAG+AGG 0.657496 1_3:-1461320 Msa0096030:intron
TATGTCATCAAGTGACTGGG+TGG 0.662591 1_3:+1454787 None:intergenic
CATGATTTGCTGAATATGGA+GGG 0.667358 1_3:-1459842 Msa0096030:CDS
GCTTTGTAGGAACAAGATCA+CGG 0.669039 1_3:+1460107 None:intergenic
ATTCAGCAAATCATGACACA+TGG 0.674046 1_3:+1459850 None:intergenic
ACTGGGTGGAACCAGCCACA+AGG 0.676280 1_3:+1454801 None:intergenic
ATGGCTGATATCACCGACGA+AGG 0.680593 1_3:-1462386 Msa0096030:intron
GACAATGTCAGGCTAGTGAA+CGG 0.683507 1_3:-1459555 Msa0096030:intron
AAAGCTGCACAAATTCAGCA+TGG 0.683869 1_3:-1459496 Msa0096030:CDS
TGCAAGGATAGAACGTCCTG+GGG 0.686134 1_3:-1456978 Msa0096030:CDS
GAATATGTCATCAAGTGACT+GGG 0.689242 1_3:+1454784 None:intergenic
TCATTAGGGAGTCAGGACTG+CGG 0.691345 1_3:-1457628 Msa0096030:CDS
TGATCCTGCACAATTCATCA+CGG 0.693413 1_3:-1455079 Msa0096030:intron
CAAAACTAACCTCTACATGG+AGG 0.693964 1_3:+1458551 None:intergenic
GTAGCAGTGAAATGTCAACA+AGG 0.703273 1_3:-1458633 Msa0096030:CDS
TTGAAGACATACACAAACGA+AGG 0.709550 1_3:-1462148 Msa0096030:CDS
TAGCAGTGAAATGTCAACAA+GGG 0.710043 1_3:-1458632 Msa0096030:CDS
TACCCATCATCAGAGCCTCG+CGG 0.738058 1_3:+1456485 None:intergenic
CCAAGTTGGGCAAAACCGCG+AGG 0.739809 1_3:-1456500 Msa0096030:CDS
AATAACTTGAGAATGCTTGG+GGG 0.791847 1_3:-1457094 Msa0096030:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTATTTATTTAAAA+TGG - chr1_3:1459896-1459915 Msa0096030:intron 0.0%
!!! ATAGTAAAAGAATTTTTTAT+TGG + chr1_3:1455543-1455562 None:intergenic 10.0%
!!! CTATTGATTTTAAAATTTTA+AGG - chr1_3:1455559-1455578 Msa0096030:intron 10.0%
!!! TTAAAATTTTAAGGATTTTA+TGG - chr1_3:1455568-1455587 Msa0096030:intron 10.0%
!!! TAATTAATTTTATTCCTTTT+TGG - chr1_3:1458171-1458190 Msa0096030:intron 10.0%
!!! TTTAAAAAAAAGAGTATAAT+TGG - chr1_3:1461330-1461349 Msa0096030:CDS 10.0%
!!! ATAACTTAAGATTTTAAAAT+AGG + chr1_3:1461567-1461586 None:intergenic 10.0%
!!! AAATTTTTATATTTTCTTGT+CGG - chr1_3:1463912-1463931 Msa0096030:intron 10.0%
!!! AATAATTTTTCCAATAAATT+GGG - chr1_3:1464038-1464057 Msa0096030:intron 10.0%
!!! ATGGGATTTTAAAATTTTAA+AGG - chr1_3:1455418-1455437 Msa0096030:intron 15.0%
!!! TATGGATTTTATAAGATTTA+AGG - chr1_3:1455586-1455605 Msa0096030:intron 15.0%
!!! ATGGATTTTATAAGATTTAA+GGG - chr1_3:1455587-1455606 Msa0096030:intron 15.0%
!! TAACAAATAAAAAATGTGTA+TGG + chr1_3:1455642-1455661 None:intergenic 15.0%
!!! TTTTTTTGAAAGATTTGTAA+GGG + chr1_3:1455715-1455734 None:intergenic 15.0%
!!! TTTTTTTTGAAAGATTTGTA+AGG + chr1_3:1455716-1455735 None:intergenic 15.0%
!!! TTTAATAAATTGGATTTTGA+TGG + chr1_3:1456029-1456048 None:intergenic 15.0%
!! TTAATTATGAAAAAATCTTG+TGG + chr1_3:1456206-1456225 None:intergenic 15.0%
!! TTATATAAACTACAAACTAA+GGG + chr1_3:1456270-1456289 None:intergenic 15.0%
!! ATTATATAAACTACAAACTA+AGG + chr1_3:1456271-1456290 None:intergenic 15.0%
!! AATTAACACATCTATTATTA+AGG - chr1_3:1456975-1456994 Msa0096030:CDS 15.0%
!! AAATTACTTCATACATTTAT+TGG + chr1_3:1457330-1457349 None:intergenic 15.0%
!!! TTTTAAGTTTTGAATATCAA+AGG - chr1_3:1457348-1457367 Msa0096030:CDS 15.0%
!!! TTTAAGTTTTGAATATCAAA+GGG - chr1_3:1457349-1457368 Msa0096030:CDS 15.0%
!! AAATTTATTAAGAACCAAAA+AGG + chr1_3:1458188-1458207 None:intergenic 15.0%
!!! AAACACTAATTTGTAATTAT+AGG + chr1_3:1460357-1460376 None:intergenic 15.0%
!! GAATATGTTGAAATTATTAT+GGG + chr1_3:1460467-1460486 None:intergenic 15.0%
!! TGAATATGTTGAAATTATTA+TGG + chr1_3:1460468-1460487 None:intergenic 15.0%
!! ATATATTTAAGAATGTTAGA+TGG - chr1_3:1461007-1461026 Msa0096030:intron 15.0%
!! TTAATAGTGAAAAAGAAATA+AGG + chr1_3:1461186-1461205 None:intergenic 15.0%
!! TTAAGATTAGAGTATAATTA+AGG - chr1_3:1461202-1461221 Msa0096030:intron 15.0%
!! TAAGATTAGAGTATAATTAA+GGG - chr1_3:1461203-1461222 Msa0096030:intron 15.0%
!!! TTACACTTTTTTAAATTGTA+GGG + chr1_3:1461394-1461413 None:intergenic 15.0%
!!! TTTACACTTTTTTAAATTGT+AGG + chr1_3:1461395-1461414 None:intergenic 15.0%
!!! ACAATTTAAAAAAGTGTAAA+TGG - chr1_3:1461395-1461414 Msa0096030:CDS 15.0%
!!! CAATTTAAAAAAGTGTAAAT+GGG - chr1_3:1461396-1461415 Msa0096030:CDS 15.0%
!! AAAAATTAACAGTATCATTA+GGG - chr1_3:1461629-1461648 Msa0096030:intron 15.0%
!! AAGTAAGATATTCTTAATAT+GGG - chr1_3:1461745-1461764 Msa0096030:intron 15.0%
!! CATGTATGAAATTTAATATA+TGG + chr1_3:1461878-1461897 None:intergenic 15.0%
!! AAATTTAATTGAAGTTAGAA+TGG - chr1_3:1463625-1463644 Msa0096030:intron 15.0%
!!! GAATAATTTTTCCAATAAAT+TGG - chr1_3:1464037-1464056 Msa0096030:intron 15.0%
!! GAAAACTAAATAAATTATTC+TGG + chr1_3:1464546-1464565 None:intergenic 15.0%
!! ATAATTATTCAGCTTTACTT+TGG - chr1_3:1455172-1455191 Msa0096030:intron 20.0%
!!! TTATACACTCAAGATTTTAA+TGG - chr1_3:1455357-1455376 Msa0096030:intron 20.0%
!!! TAAAGGATTCAATGAATTTT+AGG - chr1_3:1455435-1455454 Msa0096030:intron 20.0%
!!! AAAGGATTCAATGAATTTTA+GGG - chr1_3:1455436-1455455 Msa0096030:intron 20.0%
!! TATGTACAATTGAATATTGT+GGG + chr1_3:1455676-1455695 None:intergenic 20.0%
!! ATATGTACAATTGAATATTG+TGG + chr1_3:1455677-1455696 None:intergenic 20.0%
!! TAATTTCAAACACAAAATGA+GGG + chr1_3:1455751-1455770 None:intergenic 20.0%
!! TATATAAACTACAAACTAAG+GGG + chr1_3:1456269-1456288 None:intergenic 20.0%
!!! AATATAAACTTTGACTTGTA+TGG - chr1_3:1456526-1456545 Msa0096030:CDS 20.0%
!! AAAGGAAATAGAACTAAAAA+AGG + chr1_3:1457069-1457088 None:intergenic 20.0%
!!! TTTTAGTTCTATTTCCTTTA+TGG - chr1_3:1457070-1457089 Msa0096030:CDS 20.0%
!!! ATTCCAAAATGTTTTGTAAA+CGG + chr1_3:1457283-1457302 None:intergenic 20.0%
!! AACATAAGGTGAAAAATAAA+AGG + chr1_3:1457431-1457450 None:intergenic 20.0%
!!! TAACATGATAATGAATTACA+TGG - chr1_3:1457534-1457553 Msa0096030:intron 20.0%
!!! ATAATTATACCATAACCTTT+TGG - chr1_3:1457609-1457628 Msa0096030:CDS 20.0%
!!! AATTATGTTTTTATCAGACA+TGG - chr1_3:1457739-1457758 Msa0096030:intron 20.0%
!!! TTTTTTTTTCTCTTCTTGTA+GGG - chr1_3:1457855-1457874 Msa0096030:intron 20.0%
!!! AATATTTTAGTTATTGTGTG+TGG + chr1_3:1458605-1458624 None:intergenic 20.0%
!! ACATATTTAGTATCTTTCAA+GGG + chr1_3:1458736-1458755 None:intergenic 20.0%
!! TACATATTTAGTATCTTTCA+AGG + chr1_3:1458737-1458756 None:intergenic 20.0%
!!! ATCTAGTGTTTGTTTTTTTA+AGG - chr1_3:1459537-1459556 Msa0096030:CDS 20.0%
!! ACTTTGAATATATTTAGTGA+TGG - chr1_3:1460069-1460088 Msa0096030:CDS 20.0%
!! CTTTGAATATATTTAGTGAT+GGG - chr1_3:1460070-1460089 Msa0096030:CDS 20.0%
!! TTATTATATTCTAACAGAAC+AGG + chr1_3:1460156-1460175 None:intergenic 20.0%
!! AAGATAAAATTAGTTGTATC+AGG + chr1_3:1460758-1460777 None:intergenic 20.0%
!! CTTAAATATATAAAACACTC+AGG + chr1_3:1460998-1461017 None:intergenic 20.0%
!! AATAAGTAAAATAGAACATG+TGG - chr1_3:1461049-1461068 Msa0096030:intron 20.0%
!! ATAAGTAAAATAGAACATGT+GGG - chr1_3:1461050-1461069 Msa0096030:intron 20.0%
!!! AGTTTTTCTTTTTAAACCAT+GGG + chr1_3:1461423-1461442 None:intergenic 20.0%
!! AAAGAAAAACTGAAATTCAA+CGG - chr1_3:1461432-1461451 Msa0096030:intron 20.0%
!! ACAAAACAATAGTGAATTTA+GGG + chr1_3:1461461-1461480 None:intergenic 20.0%
!! AACAAAACAATAGTGAATTT+AGG + chr1_3:1461462-1461481 None:intergenic 20.0%
!!! TATACAAGCTTTATATATGA+TGG - chr1_3:1461584-1461603 Msa0096030:intron 20.0%
!! GAAAAATTAACAGTATCATT+AGG - chr1_3:1461628-1461647 Msa0096030:intron 20.0%
!! GAAGTAAGATATTCTTAATA+TGG - chr1_3:1461744-1461763 Msa0096030:intron 20.0%
!!! TTTTAACATGTACATTGATT+AGG + chr1_3:1461794-1461813 None:intergenic 20.0%
!! TTATTCATCATATGGAAAAA+CGG + chr1_3:1462519-1462538 None:intergenic 20.0%
!! ACTTGAAATTATTCATCATA+TGG + chr1_3:1462527-1462546 None:intergenic 20.0%
!! TTAACTAGAAAGTAATTTCA+AGG - chr1_3:1463436-1463455 Msa0096030:intron 20.0%
!! TAACTAGAAAGTAATTTCAA+GGG - chr1_3:1463437-1463456 Msa0096030:intron 20.0%
!!! GAATTTTCTTCGTATTAAAT+AGG - chr1_3:1463463-1463482 Msa0096030:intron 20.0%
!!! TGAATGCATGTTATTTTTTA+AGG - chr1_3:1463833-1463852 Msa0096030:intron 20.0%
!!! AAAAATTTGTTTGCAACTAA+GGG + chr1_3:1463900-1463919 None:intergenic 20.0%
!!! TAAAAATTTGTTTGCAACTA+AGG + chr1_3:1463901-1463920 None:intergenic 20.0%
! AAAAAGTGATCAAATCAAAG+AGG - chr1_3:1454674-1454693 Msa0096030:three_prime_UTR 25.0%
!!! TTGCTTGAAATTTTGGTAAT+TGG + chr1_3:1454776-1454795 None:intergenic 25.0%
!!! GTGTAATTTGCTTGAAATTT+TGG + chr1_3:1454783-1454802 None:intergenic 25.0%
!!! ATGATGATGATATTGTTTTC+AGG - chr1_3:1454940-1454959 Msa0096030:CDS 25.0%
!! TACTTTGGATATCTAGAATT+AGG - chr1_3:1455187-1455206 Msa0096030:intron 25.0%
!!! ATTTATCACACTGACTTTTA+AGG - chr1_3:1455380-1455399 Msa0096030:intron 25.0%
!! AAGGATTTCAAAGGATTTTA+TGG - chr1_3:1455399-1455418 Msa0096030:intron 25.0%
!! AGGATTTCAAAGGATTTTAT+GGG - chr1_3:1455400-1455419 Msa0096030:intron 25.0%
!! AAGGATTCAATGAATTTTAG+GGG - chr1_3:1455437-1455456 Msa0096030:intron 25.0%
! CTAATTTCAAACACAAAATG+AGG + chr1_3:1455752-1455771 None:intergenic 25.0%
! ATGAAAAGATGAGATTTCTT+GGG + chr1_3:1455961-1455980 None:intergenic 25.0%
! CGAAGGATTGTTTAATAAAT+TGG + chr1_3:1456039-1456058 None:intergenic 25.0%
! TCAAAATCATTCAAATTCGA+AGG + chr1_3:1456056-1456075 None:intergenic 25.0%
!!! TGTCATTTTAAAAAGTCTTG+AGG + chr1_3:1456123-1456142 None:intergenic 25.0%
! CTCATATGTAAAGTATGTTT+CGG + chr1_3:1456708-1456727 None:intergenic 25.0%
!! TCCTTTATGGTTTGATATTT+TGG - chr1_3:1457083-1457102 Msa0096030:CDS 25.0%
! ACCAAAATATCAAACCATAA+AGG + chr1_3:1457087-1457106 None:intergenic 25.0%
! AAATATATAGCATCCATTGT+TGG + chr1_3:1457158-1457177 None:intergenic 25.0%
! CATATTTGGAAGTAAACATA+AGG + chr1_3:1457445-1457464 None:intergenic 25.0%
! TACAAATCTCATGTCATATT+TGG + chr1_3:1457459-1457478 None:intergenic 25.0%
! GTTATTTGTAGAGAATAGAA+AGG + chr1_3:1457518-1457537 None:intergenic 25.0%
!! GAAAATATTTTACAGCCAAA+AGG + chr1_3:1457627-1457646 None:intergenic 25.0%
! GATGAGAAAACAACTAAATA+GGG + chr1_3:1457703-1457722 None:intergenic 25.0%
! TGATGAGAAAACAACTAAAT+AGG + chr1_3:1457704-1457723 None:intergenic 25.0%
! ACACACATAAGATACTATAA+TGG + chr1_3:1457801-1457820 None:intergenic 25.0%
!! AAAATAAATAAGTTGAAGCC+AGG + chr1_3:1457831-1457850 None:intergenic 25.0%
!!! GTTTTTTTTTCTCTTCTTGT+AGG - chr1_3:1457854-1457873 Msa0096030:intron 25.0%
!! AAAACTAATTCTCTGGAAAT+AGG + chr1_3:1457901-1457920 None:intergenic 25.0%
!!! TATTTCCAGAGAATTAGTTT+TGG - chr1_3:1457900-1457919 Msa0096030:intron 25.0%
!!! TTAGTTTTGGACATTAGAAA+AGG - chr1_3:1457913-1457932 Msa0096030:intron 25.0%
! AAACTGTTGCATTAAAAGTA+TGG + chr1_3:1458019-1458038 None:intergenic 25.0%
! ATTATAGTCATAATGAACGA+AGG + chr1_3:1458155-1458174 None:intergenic 25.0%
!! TTTAAGCCTTCTTTTGTATA+TGG + chr1_3:1458292-1458311 None:intergenic 25.0%
! CAAAAATATGCAATTAGGTA+TGG + chr1_3:1458340-1458359 None:intergenic 25.0%
!!! CTAATTGCATATTTTTGAGT+CGG - chr1_3:1458343-1458362 Msa0096030:intron 25.0%
!!! TAATTGCATATTTTTGAGTC+GGG - chr1_3:1458344-1458363 Msa0096030:intron 25.0%
!!! CAATTTTGATTATTCATGTG+CGG - chr1_3:1458472-1458491 Msa0096030:intron 25.0%
! AATCGGGAATTTAATATTAG+CGG - chr1_3:1458501-1458520 Msa0096030:intron 25.0%
! CACTTTATATCTTTGGTTAT+TGG + chr1_3:1458528-1458547 None:intergenic 25.0%
! AACCAAAGATATAAAGTGAA+AGG - chr1_3:1458530-1458549 Msa0096030:intron 25.0%
! AATGAAGAGAATAATCGTAA+AGG - chr1_3:1458912-1458931 Msa0096030:intron 25.0%
!! TGAAGCATGTAATATGTTTT+AGG - chr1_3:1459080-1459099 Msa0096030:intron 25.0%
!! AATAACCAACAAATTTTCCA+AGG + chr1_3:1459301-1459320 None:intergenic 25.0%
! AAAAAACAAACACTAGATTC+AGG + chr1_3:1459535-1459554 None:intergenic 25.0%
!!! AATATCAAAAGGTATTCACA+TGG + chr1_3:1459693-1459712 None:intergenic 25.0%
! ACATTGTCATCAATATCAAA+AGG + chr1_3:1459704-1459723 None:intergenic 25.0%
! TGAATTTAGGTCAAATCATA+GGG + chr1_3:1459936-1459955 None:intergenic 25.0%
! ATGAATTTAGGTCAAATCAT+AGG + chr1_3:1459937-1459956 None:intergenic 25.0%
!!! AGTATTGATATTTGTTCCAT+TGG - chr1_3:1460119-1460138 Msa0096030:CDS 25.0%
!!! AGTGTTTTAGATTATCTCTT+AGG - chr1_3:1460247-1460266 Msa0096030:intron 25.0%
! CTATATATGTTGCGAATATT+TGG - chr1_3:1460490-1460509 Msa0096030:intron 25.0%
!!! TTTGGCCTTTTCATAATTTA+AGG - chr1_3:1460508-1460527 Msa0096030:intron 25.0%
! AGCTTCCTTAAATTATGAAA+AGG + chr1_3:1460516-1460535 None:intergenic 25.0%
! CTTAAAATGATAACACGATA+TGG - chr1_3:1460778-1460797 Msa0096030:intron 25.0%
! TGTACTATCTTACTGTAATA+TGG - chr1_3:1460815-1460834 Msa0096030:intron 25.0%
!!! AGTTTTATTAAAAAGCAGGA+TGG + chr1_3:1460884-1460903 None:intergenic 25.0%
!!! GTTCAGTTTTATTAAAAAGC+AGG + chr1_3:1460888-1460907 None:intergenic 25.0%
! GAGTATAATTAAGGGATATA+AGG - chr1_3:1461211-1461230 Msa0096030:intron 25.0%
! ATAATTAAGGGATATAAGGT+TGG - chr1_3:1461215-1461234 Msa0096030:intron 25.0%
! AAATGTTAGTGTTATGTTGT+AGG + chr1_3:1461306-1461325 None:intergenic 25.0%
!! CAGTTTTTCTTTTTAAACCA+TGG + chr1_3:1461424-1461443 None:intergenic 25.0%
!! TAGTTGCAAAGAATTTTCAA+CGG + chr1_3:1461508-1461527 None:intergenic 25.0%
! TGAAAATTCTTTGCAACTAT+AGG - chr1_3:1461509-1461528 Msa0096030:CDS 25.0%
! GAAAATTCTTTGCAACTATA+GGG - chr1_3:1461510-1461529 Msa0096030:CDS 25.0%
! AAAATTCTTTGCAACTATAG+GGG - chr1_3:1461511-1461530 Msa0096030:CDS 25.0%
! TTCTTCAAAATGAACAGAAA+GGG + chr1_3:1462051-1462070 None:intergenic 25.0%
! ATTCTTCAAAATGAACAGAA+AGG + chr1_3:1462052-1462071 None:intergenic 25.0%
! AAATTGGATAACATCATTAC+AGG + chr1_3:1462099-1462118 None:intergenic 25.0%
! AGTACTTGAAACGTAAAAAT+TGG + chr1_3:1462115-1462134 None:intergenic 25.0%
!! CTCTTTGAAAATATGTTATC+AGG - chr1_3:1462477-1462496 Msa0096030:intron 25.0%
! ATATGTTATCAGGCAAATAA+AGG - chr1_3:1462487-1462506 Msa0096030:intron 25.0%
! TATTCATCATATGGAAAAAC+GGG + chr1_3:1462518-1462537 None:intergenic 25.0%
!! TAGATTACTGATTACTACTA+AGG + chr1_3:1462835-1462854 None:intergenic 25.0%
!! CTTGTTATCAATTGTTTCAA+TGG - chr1_3:1462894-1462913 Msa0096030:intron 25.0%
! ATTAATCTCTAGATCTTTCA+TGG + chr1_3:1462997-1463016 None:intergenic 25.0%
! AAGATCTAGAGATTAATGAA+TGG - chr1_3:1463000-1463019 Msa0096030:intron 25.0%
! AGATCTAGAGATTAATGAAT+GGG - chr1_3:1463001-1463020 Msa0096030:intron 25.0%
! GAATAATCTAATCAGTAACT+AGG + chr1_3:1463164-1463183 None:intergenic 25.0%
!! TTACTGATTAGATTATTCCA+TGG - chr1_3:1463166-1463185 Msa0096030:intron 25.0%
!!! GATTTTTTTTTTTTGCTCCA+TGG + chr1_3:1463186-1463205 None:intergenic 25.0%
!!! CTTTATTTTGGTCTAAAACA+AGG + chr1_3:1463358-1463377 None:intergenic 25.0%
!!! CCACTAAAGATACTTTATTT+TGG + chr1_3:1463370-1463389 None:intergenic 25.0%
!! CCAAAATAAAGTATCTTTAG+TGG - chr1_3:1463367-1463386 Msa0096030:intron 25.0%
!! TTTTTCTGTTCTATTAAGCT+TGG - chr1_3:1463556-1463575 Msa0096030:intron 25.0%
!! CTCTATCTTTGAACTTATTT+TGG - chr1_3:1463648-1463667 Msa0096030:intron 25.0%
! CAGTTCACTATAAAATATCA+GGG + chr1_3:1463697-1463716 None:intergenic 25.0%
! ACAGTTCACTATAAAATATC+AGG + chr1_3:1463698-1463717 None:intergenic 25.0%
! AAATTATTCAAACCTCTGAT+CGG + chr1_3:1464026-1464045 None:intergenic 25.0%
! ATTCACAAATCCCAATTTAT+TGG + chr1_3:1464051-1464070 None:intergenic 25.0%
!! AGCTTCACTATTTCAATTTT+CGG + chr1_3:1464594-1464613 None:intergenic 25.0%
GATTATTACACGAAATGCTA+AGG - chr1_3:1454962-1454981 Msa0096030:intron 30.0%
!! CTAGTTTTCATTTCAAGTGT+TGG - chr1_3:1455076-1455095 Msa0096030:intron 30.0%
! TTTTACACATACAACCAATG+AGG + chr1_3:1455115-1455134 None:intergenic 30.0%
TACCTGTTTGTTTCACATTT+AGG - chr1_3:1455213-1455232 Msa0096030:intron 30.0%
ACCTGTTTGTTTCACATTTA+GGG - chr1_3:1455214-1455233 Msa0096030:intron 30.0%
!! CTGACTTTTAAGGATTTCAA+AGG - chr1_3:1455390-1455409 Msa0096030:intron 30.0%
CATGAAAAGATGAGATTTCT+TGG + chr1_3:1455962-1455981 None:intergenic 30.0%
!!! TTGGATTTTGATGGATTTTG+TGG + chr1_3:1456020-1456039 None:intergenic 30.0%
CATCACTTAAAAAAGTCTCA+TGG + chr1_3:1456082-1456101 None:intergenic 30.0%
GCATCTTAAAAAAAGTCTTG+TGG + chr1_3:1456164-1456183 None:intergenic 30.0%
! GTATTGGATTAGGATTCTAT+GGG + chr1_3:1456244-1456263 None:intergenic 30.0%
! TGTATTGGATTAGGATTCTA+TGG + chr1_3:1456245-1456264 None:intergenic 30.0%
AACCAGTACATATATCTAGA+GGG + chr1_3:1456350-1456369 None:intergenic 30.0%
AAACCAGTACATATATCTAG+AGG + chr1_3:1456351-1456370 None:intergenic 30.0%
ATGCTCTCTTAACATCAAAA+TGG - chr1_3:1457019-1457038 Msa0096030:CDS 30.0%
TGCTCTCTTAACATCAAAAT+GGG - chr1_3:1457020-1457039 Msa0096030:CDS 30.0%
! TCTTTTCTGTTCCTATTGTT+CGG - chr1_3:1457215-1457234 Msa0096030:intron 30.0%
!! ATGCCGTTTACAAAACATTT+TGG - chr1_3:1457277-1457296 Msa0096030:intron 30.0%
TTATTGGCAACTAAGATACA+GGG + chr1_3:1457314-1457333 None:intergenic 30.0%
TTTATTGGCAACTAAGATAC+AGG + chr1_3:1457315-1457334 None:intergenic 30.0%
AAGAGAATTACGGATAAAGT+TGG + chr1_3:1457386-1457405 None:intergenic 30.0%
CAGAAAGTCAAAGAGAATTA+CGG + chr1_3:1457396-1457415 None:intergenic 30.0%
! ATTTTACAGCCAAAAGGTTA+TGG + chr1_3:1457621-1457640 None:intergenic 30.0%
AATGTCCAAAACTAATTCTC+TGG + chr1_3:1457908-1457927 None:intergenic 30.0%
AATGAACGAAGGTAATATGA+CGG + chr1_3:1458144-1458163 None:intergenic 30.0%
CGACTCAAAAATATGCAATT+AGG + chr1_3:1458345-1458364 None:intergenic 30.0%
ATCAACAATAACATGCTTTC+TGG + chr1_3:1458427-1458446 None:intergenic 30.0%
AAATTGCGAATTTGCATTGA+TGG + chr1_3:1458458-1458477 None:intergenic 30.0%
ATCGGGAATTTAATATTAGC+GGG - chr1_3:1458502-1458521 Msa0096030:intron 30.0%
AGCCTTTCACTTTATATCTT+TGG + chr1_3:1458535-1458554 None:intergenic 30.0%
AGGTAGAATAATACGAAGTT+TGG - chr1_3:1458632-1458651 Msa0096030:CDS 30.0%
GGTAGAATAATACGAAGTTT+GGG - chr1_3:1458633-1458652 Msa0096030:CDS 30.0%
GTAGAATAATACGAAGTTTG+GGG - chr1_3:1458634-1458653 Msa0096030:CDS 30.0%
!! TTTTTGGTCATATCAATGCA+GGG - chr1_3:1458846-1458865 Msa0096030:intron 30.0%
!! AAATAATGAGAGAGCATTAG+AGG - chr1_3:1458878-1458897 Msa0096030:intron 30.0%
! TTTGCTTCATTAAGAGTATG+TGG - chr1_3:1458978-1458997 Msa0096030:intron 30.0%
TATTGACAGAACTATTGATC+AGG - chr1_3:1459272-1459291 Msa0096030:intron 30.0%
!!! GTTTGTTTTTTTAAGGTTCC+TGG - chr1_3:1459544-1459563 Msa0096030:CDS 30.0%
! AAAAGAACTTCTTTTCTCTC+AGG + chr1_3:1459586-1459605 None:intergenic 30.0%
! TGAGAGAAAAGAAGTTCTTT+TGG - chr1_3:1459585-1459604 Msa0096030:intron 30.0%
AAGTATAGGATAGTAAAAGC+AGG + chr1_3:1459667-1459686 None:intergenic 30.0%
TATTCACATGGCTTAAGTAT+AGG + chr1_3:1459681-1459700 None:intergenic 30.0%
! TTGATATTGATGACAATGTC+AGG - chr1_3:1459705-1459724 Msa0096030:CDS 30.0%
GTGAGTAGTAGTAATCTTAT+GGG - chr1_3:1459804-1459823 Msa0096030:intron 30.0%
TGAGTAGTAGTAATCTTATG+GGG - chr1_3:1459805-1459824 Msa0096030:intron 30.0%
GATAACTAGTCACAGAAAAA+TGG + chr1_3:1460040-1460059 None:intergenic 30.0%
!! ATATATTTAGTGATGGGCTA+AGG - chr1_3:1460076-1460095 Msa0096030:CDS 30.0%
!! TATATTTAGTGATGGGCTAA+GGG - chr1_3:1460077-1460096 Msa0096030:CDS 30.0%
TGGAAGCAATGATATTAAGT+GGG + chr1_3:1460931-1460950 None:intergenic 30.0%
ATGGAAGCAATGATATTAAG+TGG + chr1_3:1460932-1460951 None:intergenic 30.0%
TAAGAATGTTAGATGGCATT+TGG - chr1_3:1461014-1461033 Msa0096030:intron 30.0%
AAATTCTTTGCAACTATAGG+GGG - chr1_3:1461512-1461531 Msa0096030:CDS 30.0%
GTTTATCCTGAGAAATTTGA+CGG - chr1_3:1461963-1461982 Msa0096030:intron 30.0%
ATAACATCATTACAGGTGAT+GGG + chr1_3:1462092-1462111 None:intergenic 30.0%
!! TTACGTTTCAAGTACTTTTC+AGG - chr1_3:1462119-1462138 Msa0096030:CDS 30.0%
TGAATAACTTGAGAATGCTT+GGG - chr1_3:1462175-1462194 Msa0096030:intron 30.0%
TCTTAAGTTTGATATCCAGA+AGG - chr1_3:1462239-1462258 Msa0096030:intron 30.0%
TAGAAATTACCTTTACCTTC+TGG + chr1_3:1462257-1462276 None:intergenic 30.0%
ATAACCTGTACCTCTATTAT+GGG + chr1_3:1462351-1462370 None:intergenic 30.0%
! AGTGGATACATATTTTGTGT+GGG + chr1_3:1462399-1462418 None:intergenic 30.0%
! AAGTGGATACATATTTTGTG+TGG + chr1_3:1462400-1462419 None:intergenic 30.0%
CACAAAATATGTATCCACTT+AGG - chr1_3:1462400-1462419 Msa0096030:CDS 30.0%
ATTCATCATATGGAAAAACG+GGG + chr1_3:1462517-1462536 None:intergenic 30.0%
CAATTGTTTCAATGGTTTAG+TGG - chr1_3:1462902-1462921 Msa0096030:intron 30.0%
CTTTCATGGAATAAACTTCT+GGG + chr1_3:1462983-1463002 None:intergenic 30.0%
TCTTTCATGGAATAAACTTC+TGG + chr1_3:1462984-1463003 None:intergenic 30.0%
! AGAAAGACATGGTTTTTGAT+AGG - chr1_3:1463024-1463043 Msa0096030:intron 30.0%
AATCTAACAATTGCTTCTGA+TGG - chr1_3:1463209-1463228 Msa0096030:intron 30.0%
ATCTAACAATTGCTTCTGAT+GGG - chr1_3:1463210-1463229 Msa0096030:intron 30.0%
CTACTCTACTCATAAATGAA+GGG + chr1_3:1463276-1463295 None:intergenic 30.0%
TCTACTCTACTCATAAATGA+AGG + chr1_3:1463277-1463296 None:intergenic 30.0%
AGAGCAAAAGTTAATCTGAA+AGG - chr1_3:1463403-1463422 Msa0096030:intron 30.0%
TAGAAAGTAATTTCAAGGGT+AGG - chr1_3:1463441-1463460 Msa0096030:intron 30.0%
!!! AACCACTTTTTGACAACTTT+TGG + chr1_3:1463502-1463521 None:intergenic 30.0%
GATATCAATAGAGTTACATG+CGG + chr1_3:1463795-1463814 None:intergenic 30.0%
TTCTAGTGATTTCAAGAAGA+TGG - chr1_3:1463963-1463982 Msa0096030:intron 30.0%
TCTAGTGATTTCAAGAAGAT+GGG - chr1_3:1463964-1463983 Msa0096030:intron 30.0%
CAATGAATACAAATAGTCGT+TGG + chr1_3:1463990-1464009 None:intergenic 30.0%
CGACTATTTGTATTCATTGT+CGG - chr1_3:1463991-1464010 Msa0096030:intron 30.0%
AATTATTCAAACCTCTGATC+GGG + chr1_3:1464025-1464044 None:intergenic 30.0%
! CTTCTCGTTTTCTTATCATT+TGG - chr1_3:1464076-1464095 Msa0096030:intron 30.0%
ATGCTTTAATCTTCAGCTAA+GGG - chr1_3:1464108-1464127 Msa0096030:intron 30.0%
CTGAATAGGGAAATTATTCT+AGG - chr1_3:1464154-1464173 Msa0096030:intron 30.0%
AAAACGGCTATTCCAAATTA+CGG + chr1_3:1464255-1464274 None:intergenic 30.0%
!!! CAATTCTGGTTTTGTCAAAA+CGG + chr1_3:1464271-1464290 None:intergenic 30.0%
ATGCTAAGGTCAACAAAAAC+AGG - chr1_3:1454976-1454995 Msa0096030:intron 35.0%
TGCTAAGGTCAACAAAAACA+GGG - chr1_3:1454977-1454996 Msa0096030:intron 35.0%
!! ACATACCTTCCAAGTTGATT+TGG + chr1_3:1455007-1455026 None:intergenic 35.0%
CCTGTTTGTTTCACATTTAG+GGG - chr1_3:1455215-1455234 Msa0096030:intron 35.0%
CTGTTTGTTTCACATTTAGG+GGG - chr1_3:1455216-1455235 Msa0096030:intron 35.0%
!! CGTTTGAGTTTTTCTAAGAG+AGG - chr1_3:1455778-1455797 Msa0096030:intron 35.0%
TACAAACTAAGGGGATGTAT+TGG + chr1_3:1456260-1456279 None:intergenic 35.0%
TTCCCTCTAGATATATGTAC+TGG - chr1_3:1456345-1456364 Msa0096030:intron 35.0%
AAAACCGAATAATGCGAACT+GGG - chr1_3:1456453-1456472 Msa0096030:intron 35.0%
CCATAATTATGCCACTAAGT+GGG - chr1_3:1456556-1456575 Msa0096030:CDS 35.0%
CATAATTATGCCACTAAGTG+GGG - chr1_3:1456557-1456576 Msa0096030:CDS 35.0%
TAGATATGCATGCATGTTTG+TGG - chr1_3:1456665-1456684 Msa0096030:intron 35.0%
ACATATGAGTGAACTGTTGA+AGG - chr1_3:1456719-1456738 Msa0096030:intron 35.0%
TTGCCTGTAGGTACTAATAA+TGG - chr1_3:1456824-1456843 Msa0096030:intron 35.0%
TGTCCATTATTAGTACCTAC+AGG + chr1_3:1456830-1456849 None:intergenic 35.0%
AATGTCTAACTCATGCAAGA+TGG - chr1_3:1456866-1456885 Msa0096030:intron 35.0%
ACATTGACAGTCACTAAAAC+TGG + chr1_3:1456943-1456962 None:intergenic 35.0%
GCTCTCTTAACATCAAAATG+GGG - chr1_3:1457021-1457040 Msa0096030:CDS 35.0%
CTCTCTTAACATCAAAATGG+GGG - chr1_3:1457022-1457041 Msa0096030:CDS 35.0%
TCTCTTAACATCAAAATGGG+GGG - chr1_3:1457023-1457042 Msa0096030:CDS 35.0%
AAAAGGATGCCCAATAAATG+AGG + chr1_3:1457052-1457071 None:intergenic 35.0%
!!! TTTTGGTGCTTTTTTCGTAG+TGG - chr1_3:1457100-1457119 Msa0096030:CDS 35.0%
TTGAAGACATACACAAACGA+AGG - chr1_3:1457123-1457142 Msa0096030:CDS 35.0%
! ATAGCATCCATTGTTGGTAA+CGG + chr1_3:1457152-1457171 None:intergenic 35.0%
!! ATGTTTTTATCAGACATGGC+TGG - chr1_3:1457743-1457762 Msa0096030:intron 35.0%
GTCACATACTTCCTGTATAA+GGG + chr1_3:1457776-1457795 None:intergenic 35.0%
ATAAGGGGGAAAATCACAAT+AGG + chr1_3:1458047-1458066 None:intergenic 35.0%
! TTGTGATTTTCCCCCTTATT+TGG - chr1_3:1458048-1458067 Msa0096030:intron 35.0%
ATGGTATCATCCAAATAAGG+GGG + chr1_3:1458061-1458080 None:intergenic 35.0%
CATGGTATCATCCAAATAAG+GGG + chr1_3:1458062-1458081 None:intergenic 35.0%
GCATGGTATCATCCAAATAA+GGG + chr1_3:1458063-1458082 None:intergenic 35.0%
TGCATGGTATCATCCAAATA+AGG + chr1_3:1458064-1458083 None:intergenic 35.0%
TGATACCATGCAGATGAATT+TGG - chr1_3:1458072-1458091 Msa0096030:intron 35.0%
ATACTCCAAATTCATCTGCA+TGG + chr1_3:1458080-1458099 None:intergenic 35.0%
AAAGGATACAACCATATACC+TGG + chr1_3:1458117-1458136 None:intergenic 35.0%
! AGGTAATATGACGGAAGAAA+AGG + chr1_3:1458135-1458154 None:intergenic 35.0%
! CCTTCTTTTGTATATGGAGA+AGG + chr1_3:1458286-1458305 None:intergenic 35.0%
CCTTCTCCATATACAAAAGA+AGG - chr1_3:1458283-1458302 Msa0096030:intron 35.0%
! TGAGTTAGAAGCTTTGATGT+GGG - chr1_3:1458367-1458386 Msa0096030:intron 35.0%
!! TTTTGATTATTCATGTGCGG+CGG - chr1_3:1458475-1458494 Msa0096030:intron 35.0%
!!! GTTTTTGGTCATATCAATGC+AGG - chr1_3:1458845-1458864 Msa0096030:intron 35.0%
! AGAGCATTAGAGGATCTATT+TGG - chr1_3:1458888-1458907 Msa0096030:intron 35.0%
GAGCATTAGAGGATCTATTT+GGG - chr1_3:1458889-1458908 Msa0096030:intron 35.0%
TGTTGCATGTTTGAATGCAA+TGG - chr1_3:1458935-1458954 Msa0096030:intron 35.0%
AGTCTGAGGAAAATTAGGTA+TGG + chr1_3:1459232-1459251 None:intergenic 35.0%
AACTATTGATCAGGTTTCCT+TGG - chr1_3:1459281-1459300 Msa0096030:intron 35.0%
GGTTTCCTTGGAAAATTTGT+TGG - chr1_3:1459293-1459312 Msa0096030:intron 35.0%
TATGTCCACTCATGTATTAC+AGG + chr1_3:1459396-1459415 None:intergenic 35.0%
ATTCAGCAAATCATGACACA+TGG + chr1_3:1459424-1459443 None:intergenic 35.0%
!! GTGTCATGATTTGCTGAATA+TGG - chr1_3:1459425-1459444 Msa0096030:intron 35.0%
!! TCATGATTTGCTGAATATGG+AGG - chr1_3:1459428-1459447 Msa0096030:intron 35.0%
!! CATGATTTGCTGAATATGGA+GGG - chr1_3:1459429-1459448 Msa0096030:intron 35.0%
! CTTTCTCTCTCTGAGTTTTT+GGG - chr1_3:1459489-1459508 Msa0096030:intron 35.0%
!!! TTTTTTTAAGGTTCCTGGCA+AGG - chr1_3:1459549-1459568 Msa0096030:intron 35.0%
! GAGAAAAGAAGTTCTTTTGG+AGG - chr1_3:1459588-1459607 Msa0096030:intron 35.0%
GGTGAGTAGTAGTAATCTTA+TGG - chr1_3:1459803-1459822 Msa0096030:intron 35.0%
CTTATGGGGATTTCAATTGA+TGG - chr1_3:1459819-1459838 Msa0096030:intron 35.0%
ACAGGATTCAAATTGTCCAA+TGG + chr1_3:1460138-1460157 None:intergenic 35.0%
ATGAGCTAAGAATAAGAGCT+TGG + chr1_3:1460434-1460453 None:intergenic 35.0%
! AGCTTCGATTTGTAGTTTGA+TGG - chr1_3:1460532-1460551 Msa0096030:intron 35.0%
TAGCAGTGAAATGTCAACAA+GGG - chr1_3:1460639-1460658 Msa0096030:intron 35.0%
! TCAATTTGTTCGCTGTATTG+TGG + chr1_3:1460691-1460710 None:intergenic 35.0%
AAAACTAACCTCTACATGGA+GGG + chr1_3:1460722-1460741 None:intergenic 35.0%
AAAAAGCAGGATGGTAAGAA+GGG + chr1_3:1460875-1460894 None:intergenic 35.0%
TAAAAAGCAGGATGGTAAGA+AGG + chr1_3:1460876-1460895 None:intergenic 35.0%
!!! TGTGGGTTTTGTTCATGTTT+TGG - chr1_3:1461067-1461086 Msa0096030:intron 35.0%
! TAAGGGATATAAGGTTGGTT+TGG - chr1_3:1461220-1461239 Msa0096030:intron 35.0%
! TGTTAATTTTTCCTGCAAGC+TGG + chr1_3:1461620-1461639 None:intergenic 35.0%
!! CAAGCGCAGTTTATTTTCAT+GGG + chr1_3:1461925-1461944 None:intergenic 35.0%
!! ACAAGCGCAGTTTATTTTCA+TGG + chr1_3:1461926-1461945 None:intergenic 35.0%
! TTTTCTCCGTCAAATTTCTC+AGG + chr1_3:1461972-1461991 None:intergenic 35.0%
TGAGAAATTTGACGGAGAAA+AGG - chr1_3:1461971-1461990 Msa0096030:intron 35.0%
GAGAAATTTGACGGAGAAAA+GGG - chr1_3:1461972-1461991 Msa0096030:intron 35.0%
AAAGGGTCAGAATTTGATGA+AGG - chr1_3:1461989-1462008 Msa0096030:intron 35.0%
GATAACATCATTACAGGTGA+TGG + chr1_3:1462093-1462112 None:intergenic 35.0%
GTGAATAACTTGAGAATGCT+TGG - chr1_3:1462174-1462193 Msa0096030:intron 35.0%
GAATAACTTGAGAATGCTTG+GGG - chr1_3:1462176-1462195 Msa0096030:intron 35.0%
AATAACTTGAGAATGCTTGG+GGG - chr1_3:1462177-1462196 Msa0096030:intron 35.0%
!!! GTCAAACGTTTTTTGGTATC+TGG + chr1_3:1462207-1462226 None:intergenic 35.0%
GATACCAAAAAACGTTTGAC+TGG - chr1_3:1462207-1462226 Msa0096030:intron 35.0%
GTTTGATATCCAGAAGGTAA+AGG - chr1_3:1462245-1462264 Msa0096030:intron 35.0%
! ACGCTTTTATCCCATAATAG+AGG - chr1_3:1462338-1462357 Msa0096030:intron 35.0%
! TTATCCCATAATAGAGGTAC+AGG - chr1_3:1462344-1462363 Msa0096030:intron 35.0%
CATAACCTGTACCTCTATTA+TGG + chr1_3:1462352-1462371 None:intergenic 35.0%
TCTTGGTGAAATTTCCTAAG+TGG + chr1_3:1462417-1462436 None:intergenic 35.0%
! ATGCGGCTATATAACTTTTG+AGG + chr1_3:1462585-1462604 None:intergenic 35.0%
AAGCACACGTTTCTAAATAG+TGG + chr1_3:1462941-1462960 None:intergenic 35.0%
TAATGAATGGGAGAAAGACA+TGG - chr1_3:1463013-1463032 Msa0096030:intron 35.0%
! TGGTTTTTGATAGGACACTA+TGG - chr1_3:1463033-1463052 Msa0096030:intron 35.0%
AAATCTTCCAAGAGTTTGAC+AGG + chr1_3:1463141-1463160 None:intergenic 35.0%
GTCCAAAAGTTGTCAAAAAG+TGG - chr1_3:1463497-1463516 Msa0096030:intron 35.0%
CTATTTGTATTCATTGTCGG+TGG - chr1_3:1463994-1464013 Msa0096030:intron 35.0%
GATGCTTTAATCTTCAGCTA+AGG - chr1_3:1464107-1464126 Msa0096030:intron 35.0%
AGAAAAATAGCACGCAATTC+TGG + chr1_3:1464285-1464304 None:intergenic 35.0%
CGACTATTGTACATCATATC+TGG + chr1_3:1464362-1464381 None:intergenic 35.0%
TCCAAATTAACTGCAGCAAT+GGG + chr1_3:1464441-1464460 None:intergenic 35.0%
ATCCAAATTAACTGCAGCAA+TGG + chr1_3:1464442-1464461 None:intergenic 35.0%
TTTGGATATTCAACTCCTTG+TGG - chr1_3:1464455-1464474 Msa0096030:intron 35.0%
GAATATGTCATCAAGTGACT+GGG + chr1_3:1464490-1464509 None:intergenic 35.0%
AGAATATGTCATCAAGTGAC+TGG + chr1_3:1464491-1464510 None:intergenic 35.0%
TGACATATTCTGCATGAACT+AGG - chr1_3:1464500-1464519 Msa0096030:CDS 35.0%
CAAGCGTGTATGTTAATTCA+TGG + chr1_3:1464568-1464587 None:intergenic 35.0%
CATGAATTAACATACACGCT+TGG - chr1_3:1464566-1464585 Msa0096030:five_prime_UTR 35.0%
GATTCTGATTCCTCCTCTTA+CGG - chr1_3:1454745-1454764 Msa0096030:three_prime_UTR 40.0%
AGAAGAATTCCGAGTGCTTA+CGG + chr1_3:1454810-1454829 None:intergenic 40.0%
GCTAAGGTCAACAAAAACAG+GGG - chr1_3:1454978-1454997 Msa0096030:intron 40.0%
GGATTCCAAATCAACTTGGA+AGG - chr1_3:1454999-1455018 Msa0096030:intron 40.0%
CCCCTAAATGTGAAACAAAC+AGG + chr1_3:1455218-1455237 None:intergenic 40.0%
! TTCACATTTAGGGGGTGTAT+TGG - chr1_3:1455224-1455243 Msa0096030:intron 40.0%
! TTTAGGGGGTGTATTGGATT+AGG - chr1_3:1455230-1455249 Msa0096030:intron 40.0%
GAGAGAGAGAGAGAGATAAA+AGG - chr1_3:1455856-1455875 Msa0096030:intron 40.0%
ATAGAGAGACGAAGAGAGAA+AGG - chr1_3:1455883-1455902 Msa0096030:intron 40.0%
CTAAGGGGATGTATTGGATT+AGG + chr1_3:1456254-1456273 None:intergenic 40.0%
GGTTTATGCACACTAAATGC+TGG - chr1_3:1456366-1456385 Msa0096030:intron 40.0%
TATGCACACTAAATGCTGGT+AGG - chr1_3:1456370-1456389 Msa0096030:intron 40.0%
!! TGGTTTGCTTGCTCATCATA+AGG + chr1_3:1456434-1456453 None:intergenic 40.0%
! CAGTTCGCATTATTCGGTTT+TGG + chr1_3:1456454-1456473 None:intergenic 40.0%
CAAAACCGAATAATGCGAAC+TGG - chr1_3:1456452-1456471 Msa0096030:intron 40.0%
ATAGCCCAGTTCGCATTATT+CGG + chr1_3:1456460-1456479 None:intergenic 40.0%
GCCATAATTATGCCACTAAG+TGG - chr1_3:1456555-1456574 Msa0096030:CDS 40.0%
CCCACTTAGTGGCATAATTA+TGG + chr1_3:1456559-1456578 None:intergenic 40.0%
CAACATGGATCAACATGTAG+CGG + chr1_3:1456584-1456603 None:intergenic 40.0%
AAAGTATGTTTCGGCTACTC+TGG + chr1_3:1456699-1456718 None:intergenic 40.0%
CTTACATGAAACACCTTCGT+CGG + chr1_3:1456901-1456920 None:intergenic 40.0%
!! ATGTGTTACTTCTCTCTGGT+TGG + chr1_3:1457188-1457207 None:intergenic 40.0%
!! TCAGATGTGTTACTTCTCTC+TGG + chr1_3:1457192-1457211 None:intergenic 40.0%
!! ACAGAAAAGTGCCGAACAAT+AGG + chr1_3:1457229-1457248 None:intergenic 40.0%
! TTTTATCAGACATGGCTGGA+AGG - chr1_3:1457747-1457766 Msa0096030:intron 40.0%
TTTATCAGACATGGCTGGAA+GGG - chr1_3:1457748-1457767 Msa0096030:intron 40.0%
CGTCACATACTTCCTGTATA+AGG + chr1_3:1457777-1457796 None:intergenic 40.0%
! CTTATGTGTGTCATTCATCC+TGG - chr1_3:1457810-1457829 Msa0096030:intron 40.0%
TGGACATTAGAAAAGGTCTG+AGG - chr1_3:1457920-1457939 Msa0096030:intron 40.0%
GGACATTAGAAAAGGTCTGA+GGG - chr1_3:1457921-1457940 Msa0096030:intron 40.0%
TCGATTAGGTGCATTAAGAG+AGG - chr1_3:1457951-1457970 Msa0096030:intron 40.0%
! GTATTTTGCCATAGATTGCC+AGG - chr1_3:1458096-1458115 Msa0096030:intron 40.0%
ACCATATACCTGGCAATCTA+TGG + chr1_3:1458107-1458126 None:intergenic 40.0%
! GTGAGTTAGAAGCTTTGATG+TGG - chr1_3:1458366-1458385 Msa0096030:intron 40.0%
TATAAAGTGAAAGGCTCGCT+AGG - chr1_3:1458539-1458558 Msa0096030:intron 40.0%
ATAAAGTGAAAGGCTCGCTA+GGG - chr1_3:1458540-1458559 Msa0096030:intron 40.0%
GTATAGTAAGTCTGTGGCTT+AGG + chr1_3:1458575-1458594 None:intergenic 40.0%
ACAGACGTATAGTAAGTCTG+TGG + chr1_3:1458581-1458600 None:intergenic 40.0%
GAATAATACGAAGTTTGGGG+TGG - chr1_3:1458637-1458656 Msa0096030:CDS 40.0%
AATAAGATACGCATGACCAC+AGG + chr1_3:1458673-1458692 None:intergenic 40.0%
GTGGTCATGCGTATCTTATT+AGG - chr1_3:1458673-1458692 Msa0096030:intron 40.0%
GTTAGTAACTAATCCTGCCA+TGG - chr1_3:1458790-1458809 Msa0096030:intron 40.0%
GGTACAAACTAATGAGACCA+TGG + chr1_3:1458810-1458829 None:intergenic 40.0%
! TAGTTTGTACCTTCAGCTTG+AGG - chr1_3:1458819-1458838 Msa0096030:intron 40.0%
AAAAACACACCTCAAGCTGA+AGG + chr1_3:1458831-1458850 None:intergenic 40.0%
! TTCAGCTTGAGGTGTGTTTT+TGG - chr1_3:1458830-1458849 Msa0096030:intron 40.0%
AGTCATTGTGTTTGCGTCTA+GGG + chr1_3:1459139-1459158 None:intergenic 40.0%
TAGTCATTGTGTTTGCGTCT+AGG + chr1_3:1459140-1459159 None:intergenic 40.0%
GCTTTGTAGGAACAAGATCA+CGG + chr1_3:1459167-1459186 None:intergenic 40.0%
GTCTCAGTCTGAGGAAAATT+AGG + chr1_3:1459237-1459256 None:intergenic 40.0%
TTGCTCCTGTAATACATGAG+TGG - chr1_3:1459388-1459407 Msa0096030:intron 40.0%
CCAAAAACTCAGAGAGAGAA+AGG + chr1_3:1459491-1459510 None:intergenic 40.0%
! CCTTTCTCTCTCTGAGTTTT+TGG - chr1_3:1459488-1459507 Msa0096030:intron 40.0%
CTACATCAGCAATATGAGCA+TGG + chr1_3:1459642-1459661 None:intergenic 40.0%
CATGCTCATATTGCTGATGT+AGG - chr1_3:1459640-1459659 Msa0096030:CDS 40.0%
AAAGCTGCACAAATTCAGCA+TGG - chr1_3:1459775-1459794 Msa0096030:intron 40.0%
CACAAATTCAGCATGGTTCA+AGG - chr1_3:1459782-1459801 Msa0096030:intron 40.0%
AAAAATGGCTGGAAACACTC+GGG + chr1_3:1460025-1460044 None:intergenic 40.0%
GAAAAATGGCTGGAAACACT+CGG + chr1_3:1460026-1460045 None:intergenic 40.0%
ACTAGTCACAGAAAAATGGC+TGG + chr1_3:1460036-1460055 None:intergenic 40.0%
CTAAGGGAACAAATCGTAGA+TGG - chr1_3:1460093-1460112 Msa0096030:CDS 40.0%
GTAGCAGTGAAATGTCAACA+AGG - chr1_3:1460638-1460657 Msa0096030:intron 40.0%
AACAAGGGACTTACAGAAGA+TGG - chr1_3:1460654-1460673 Msa0096030:intron 40.0%
CAAAACTAACCTCTACATGG+AGG + chr1_3:1460723-1460742 None:intergenic 40.0%
CGACAAAACTAACCTCTACA+TGG + chr1_3:1460726-1460745 None:intergenic 40.0%
! CCACTTCTTTTATTGCCTCT+GGG - chr1_3:1460843-1460862 Msa0096030:intron 40.0%
ATAAGGTAGCACTTGACATG+CGG + chr1_3:1461169-1461188 None:intergenic 40.0%
AGTTAAGGAGTGGAGTGATA+AGG - chr1_3:1461260-1461279 Msa0096030:intron 40.0%
! AAAAGTGTAAATGGGTCCCA+TGG - chr1_3:1461404-1461423 Msa0096030:intron 40.0%
! ACGGAGTCTTGTAAGCTATT+AGG + chr1_3:1461489-1461508 None:intergenic 40.0%
AACAGTATCATTAGGGAGTC+AGG - chr1_3:1461636-1461655 Msa0096030:intron 40.0%
!!! GTGGAGCAAGATCTTGTTTT+TGG - chr1_3:1461678-1461697 Msa0096030:intron 40.0%
! GCGCTTGTTAATGATTCTTG+CGG - chr1_3:1461938-1461957 Msa0096030:intron 40.0%
!!! CAAGTACTTTTCAGGTAGCA+CGG - chr1_3:1462127-1462146 Msa0096030:CDS 40.0%
!!! AGCACCAGTCAAACGTTTTT+TGG + chr1_3:1462214-1462233 None:intergenic 40.0%
AAACGTTTGACTGGTGCTTT+CGG - chr1_3:1462216-1462235 Msa0096030:intron 40.0%
AGGAAATTTCACCAAGACGA+TGG - chr1_3:1462420-1462439 Msa0096030:CDS 40.0%
GCAAAATAAAGCCATCGTCT+TGG + chr1_3:1462434-1462453 None:intergenic 40.0%
ATCATATGGAAAAACGGGGT+TGG + chr1_3:1462513-1462532 None:intergenic 40.0%
TGACGAGTGGATGAATATTC+AGG - chr1_3:1462608-1462627 Msa0096030:intron 40.0%
CACGAGAAATCAACTGTCTA+AGG - chr1_3:1462647-1462666 Msa0096030:intron 40.0%
GAGAAATCAACTGTCTAAGG+AGG - chr1_3:1462650-1462669 Msa0096030:intron 40.0%
GCACTTGGATCATTCAAACA+TGG + chr1_3:1462681-1462700 None:intergenic 40.0%
! TGATGTAAAGTGCCAGCAAA+AGG + chr1_3:1462720-1462739 None:intergenic 40.0%
CGTCTTGATCTCATTGAATG+AGG + chr1_3:1462747-1462766 None:intergenic 40.0%
ATCAAGACGTACACCAAGTT+GGG - chr1_3:1462758-1462777 Msa0096030:intron 40.0%
TGTTTCAATGGTTTAGTGGC+TGG - chr1_3:1462906-1462925 Msa0096030:intron 40.0%
AAACGTGTGCTTCATTGTCT+GGG - chr1_3:1462949-1462968 Msa0096030:intron 40.0%
! CAAGCTTTATCCACTAAGTG+GGG + chr1_3:1463082-1463101 None:intergenic 40.0%
! CCAAGCTTTATCCACTAAGT+GGG + chr1_3:1463083-1463102 None:intergenic 40.0%
! ACCAAGCTTTATCCACTAAG+TGG + chr1_3:1463084-1463103 None:intergenic 40.0%
TTACTGTCCTGTCAAACTCT+TGG - chr1_3:1463131-1463150 Msa0096030:intron 40.0%
ACAATTGCTTCTGATGGGAT+CGG - chr1_3:1463215-1463234 Msa0096030:intron 40.0%
! GACAACTTTTGGACAAGATG+AGG + chr1_3:1463491-1463510 None:intergenic 40.0%
AAATATCAGGGTCTGACTCA+AGG + chr1_3:1463685-1463704 None:intergenic 40.0%
AGCTTACTAGAAGGCTGAAT+AGG - chr1_3:1464140-1464159 Msa0096030:intron 40.0%
GCTTACTAGAAGGCTGAATA+GGG - chr1_3:1464141-1464160 Msa0096030:intron 40.0%
TGATCCTGCACAATTCATCA+CGG - chr1_3:1464192-1464211 Msa0096030:intron 40.0%
AATACCGTGATGAATTGTGC+AGG + chr1_3:1464199-1464218 None:intergenic 40.0%
TCCAAATTACGGCACACATT+CGG + chr1_3:1464244-1464263 None:intergenic 40.0%
TCCCATTGCTGCAGTTAATT+TGG - chr1_3:1464437-1464456 Msa0096030:intron 40.0%
!! GAGGAGCATCATGTCTATGT+CGG - chr1_3:1454723-1454742 Msa0096030:three_prime_UTR 45.0%
CAGGGGATTCCAAATCAACT+TGG - chr1_3:1454995-1455014 Msa0096030:intron 45.0%
GCAAGTTGTCATTGCCTCAT+TGG - chr1_3:1455098-1455117 Msa0096030:CDS 45.0%
ACGAAGAGAGAAAGGAGAGA+GGG - chr1_3:1455891-1455910 Msa0096030:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr1_3:1456611-1456630 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr1_3:1456612-1456631 None:intergenic 45.0%
! TCAAGCCTTATCCCACTAAG+TGG + chr1_3:1456613-1456632 None:intergenic 45.0%
TTCATCGTTTGCTTGCCTGT+AGG - chr1_3:1456812-1456831 Msa0096030:intron 45.0%
!! CGACGAAGGTGTTTCATGTA+AGG - chr1_3:1456899-1456918 Msa0096030:intron 45.0%
AAGGCAACCGTTACCAACAA+TGG - chr1_3:1457142-1457161 Msa0096030:intron 45.0%
! CTCTGGAAATAGGTGAGCTA+AGG + chr1_3:1457891-1457910 None:intergenic 45.0%
GCCATAGATTGCCAGGTATA+TGG - chr1_3:1458103-1458122 Msa0096030:intron 45.0%
TAAAGTGAAAGGCTCGCTAG+GGG - chr1_3:1458541-1458560 Msa0096030:intron 45.0%
CAAACTAATGAGACCATGGC+AGG + chr1_3:1458806-1458825 None:intergenic 45.0%
GTCAATAATGAGCAACTCGC+AGG + chr1_3:1459259-1459278 None:intergenic 45.0%
! TTTTCTCTCAGGTAGACCTC+CGG + chr1_3:1459575-1459594 None:intergenic 45.0%
TGGAGGATCATGATCCTGTA+TGG - chr1_3:1459605-1459624 Msa0096030:intron 45.0%
GACAATGTCAGGCTAGTGAA+CGG - chr1_3:1459716-1459735 Msa0096030:intron 45.0%
CTAAATTCATTCCCCGCTGT+GGG - chr1_3:1459947-1459966 Msa0096030:intron 45.0%
TTGCCACCATGTGGTGTATT+CGG - chr1_3:1459984-1460003 Msa0096030:intron 45.0%
AGATCACCGAATACACCACA+TGG + chr1_3:1459993-1460012 None:intergenic 45.0%
AAAATGGCTGGAAACACTCG+GGG + chr1_3:1460024-1460043 None:intergenic 45.0%
! GCCACTTCTTTTATTGCCTC+TGG - chr1_3:1460842-1460861 Msa0096030:intron 45.0%
CCCAGAGGCAATAAAAGAAG+TGG + chr1_3:1460846-1460865 None:intergenic 45.0%
TAAGAAGGGAAATTGCCCAG+AGG + chr1_3:1460861-1460880 None:intergenic 45.0%
TCCATCACAATTCTCGCTGA+AGG - chr1_3:1460947-1460966 Msa0096030:intron 45.0%
TCCTTCAGCGAGAATTGTGA+TGG + chr1_3:1460951-1460970 None:intergenic 45.0%
CACTTGACATGCGGAGAAAA+TGG + chr1_3:1461160-1461179 None:intergenic 45.0%
!! GGGATATAAGGTTGGTTTGG+TGG - chr1_3:1461223-1461242 Msa0096030:intron 45.0%
!! TAAGGTTGGTTTGGTGGATG+AGG - chr1_3:1461229-1461248 Msa0096030:intron 45.0%
TAAGGAGTGGAGTGATAAGG+AGG - chr1_3:1461263-1461282 Msa0096030:intron 45.0%
TGGAGTGATAAGGAGGTTGA+GGG - chr1_3:1461270-1461289 Msa0096030:intron 45.0%
AAACAAGATCTTGCTCCACC+TGG + chr1_3:1461677-1461696 None:intergenic 45.0%
AGGTGTGATTTCTGTCTTGC+TGG - chr1_3:1462009-1462028 Msa0096030:intron 45.0%
GGTGTGATTTCTGTCTTGCT+GGG - chr1_3:1462010-1462029 Msa0096030:intron 45.0%
! GTAAAAAGAAGCGTGCTGCA+AGG - chr1_3:1462277-1462296 Msa0096030:intron 45.0%
GTCCTGGGGAAGAAGAAAAA+TGG - chr1_3:1462307-1462326 Msa0096030:intron 45.0%
!!! TGCCATTTTTCTTCTTCCCC+AGG + chr1_3:1462312-1462331 None:intergenic 45.0%
TCATCCACTCGTCACATATG+CGG + chr1_3:1462602-1462621 None:intergenic 45.0%
GATCAAGACGTACACCAAGT+TGG - chr1_3:1462757-1462776 Msa0096030:intron 45.0%
!! GCTCTGATGATGGGTATTCA+AGG - chr1_3:1462793-1462812 Msa0096030:intron 45.0%
GAAACGTGTGCTTCATTGTC+TGG - chr1_3:1462948-1462967 Msa0096030:intron 45.0%
AACGTGTGCTTCATTGTCTG+GGG - chr1_3:1462950-1462969 Msa0096030:intron 45.0%
CTTTATCCACTAAGTGGGGT+CGG + chr1_3:1463078-1463097 None:intergenic 45.0%
! CCCACTTAGTGGATAAAGCT+TGG - chr1_3:1463080-1463099 Msa0096030:intron 45.0%
CTTGCCACAAGCTTACTAGA+AGG - chr1_3:1464131-1464150 Msa0096030:intron 45.0%
TCAGCCTTCTAGTAAGCTTG+TGG + chr1_3:1464138-1464157 None:intergenic 45.0%
CACACATTCGGCACAGAAAA+AGG + chr1_3:1464232-1464251 None:intergenic 45.0%
GATATTCAACTCCTTGTGGC+TGG - chr1_3:1464459-1464478 Msa0096030:intron 45.0%
TATGTCATCAAGTGACTGGG+TGG + chr1_3:1464487-1464506 None:intergenic 45.0%
!! AAATATTTAATATTTAAAGA+TGG - chr1_3:1456500-1456519 Msa0096030:CDS 5.0%
!! TAACTAAAATATTAAAAAAT+AGG - chr1_3:1458612-1458631 Msa0096030:CDS 5.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr1_3:1454704-1454723 Msa0096030:three_prime_UTR 50.0%
TCTGATTCCTCCTCTTACGG+TGG - chr1_3:1454748-1454767 Msa0096030:three_prime_UTR 50.0%
GTGAGAGAGAGAGAGAAGAG+AGG - chr1_3:1455800-1455819 Msa0096030:intron 50.0%
AGAGAGAGAGAGAAGAGAGG+AGG - chr1_3:1455803-1455822 Msa0096030:intron 50.0%
GAGAGAGAGAGAAGAGAGGA+GGG - chr1_3:1455804-1455823 Msa0096030:intron 50.0%
GACGAAGAGAGAAAGGAGAG+AGG - chr1_3:1455890-1455909 Msa0096030:intron 50.0%
CGAAGAGAGAAAGGAGAGAG+GGG - chr1_3:1455892-1455911 Msa0096030:intron 50.0%
GAAGAGAGAAAGGAGAGAGG+GGG - chr1_3:1455893-1455912 Msa0096030:intron 50.0%
AAGAGAGAAAGGAGAGAGGG+GGG - chr1_3:1455894-1455913 Msa0096030:intron 50.0%
CGAACTGGGCTATGTGCAAT+TGG - chr1_3:1456467-1456486 Msa0096030:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr1_3:1456607-1456626 None:intergenic 50.0%
TATGTTTCGGCTACTCTGGC+TGG + chr1_3:1456695-1456714 None:intergenic 50.0%
ATGGCTGATATCACCGACGA+AGG - chr1_3:1456885-1456904 Msa0096030:intron 50.0%
!! TGGGGGGCATCCTCATTTAT+TGG - chr1_3:1457039-1457058 Msa0096030:CDS 50.0%
!! GGGGGGCATCCTCATTTATT+GGG - chr1_3:1457040-1457059 Msa0096030:CDS 50.0%
TTCATGTGCGGCGGAAGAAT+CGG - chr1_3:1458484-1458503 Msa0096030:intron 50.0%
GCATGACCACAGGTATGACA+TGG + chr1_3:1458663-1458682 None:intergenic 50.0%
TGTGTTTGCGTCTAGGGACT+TGG + chr1_3:1459133-1459152 None:intergenic 50.0%
!! GTTCCTACAAAGCTTGCTGC+TGG - chr1_3:1459174-1459193 Msa0096030:intron 50.0%
! ACTCCAGCAGCAAGCTTTGT+AGG + chr1_3:1459180-1459199 None:intergenic 50.0%
!! AAAGCTTGCTGCTGGAGTCT+GGG - chr1_3:1459182-1459201 Msa0096030:intron 50.0%
! TTTAAGGTTCCTGGCAAGGC+CGG - chr1_3:1459553-1459572 Msa0096030:intron 50.0%
CCACAGCGGGGAATGAATTT+AGG + chr1_3:1459949-1459968 None:intergenic 50.0%
CCTAAATTCATTCCCCGCTG+TGG - chr1_3:1459946-1459965 Msa0096030:intron 50.0%
! GTCAACTTTTACCCACAGCG+GGG + chr1_3:1459961-1459980 None:intergenic 50.0%
! CGTCAACTTTTACCCACAGC+GGG + chr1_3:1459962-1459981 None:intergenic 50.0%
! GCGTCAACTTTTACCCACAG+CGG + chr1_3:1459963-1459982 None:intergenic 50.0%
TCACCGAATACACCACATGG+TGG + chr1_3:1459990-1460009 None:intergenic 50.0%
CAAACTCTCCCTCCATGTAG+AGG - chr1_3:1460711-1460730 Msa0096030:intron 50.0%
!! TTGGTTTGGTGGATGAGGTG+TGG - chr1_3:1461234-1461253 Msa0096030:intron 50.0%
!! TGGTTTGGTGGATGAGGTGT+GGG - chr1_3:1461235-1461254 Msa0096030:intron 50.0%
GATGAGGTGTGGGGAAGTTA+AGG - chr1_3:1461245-1461264 Msa0096030:intron 50.0%
GTGGAGTGATAAGGAGGTTG+AGG - chr1_3:1461269-1461288 Msa0096030:intron 50.0%
GTCTTCTTGATCCAGCTTGC+AGG - chr1_3:1461606-1461625 Msa0096030:intron 50.0%
TCATTAGGGAGTCAGGACTG+CGG - chr1_3:1461643-1461662 Msa0096030:intron 50.0%
GTTGTGTCCTGCGTAAAAGC+GGG + chr1_3:1461903-1461922 None:intergenic 50.0%
GGTTGTGTCCTGCGTAAAAG+CGG + chr1_3:1461904-1461923 None:intergenic 50.0%
GGTAGCACGGTTAACAGATG+AGG - chr1_3:1462140-1462159 Msa0096030:CDS 50.0%
CTGCAAGGATAGAACGTCCT+GGG - chr1_3:1462292-1462311 Msa0096030:intron 50.0%
TGCAAGGATAGAACGTCCTG+GGG - chr1_3:1462293-1462312 Msa0096030:intron 50.0%
ATAGCCGCATATGTGACGAG+TGG - chr1_3:1462595-1462614 Msa0096030:intron 50.0%
GAGCTGTGGAAAGTTGCACT+TGG + chr1_3:1462696-1462715 None:intergenic 50.0%
! TTCCACAGCTCACCTTTTGC+TGG - chr1_3:1462705-1462724 Msa0096030:intron 50.0%
! TCTAAAACAAGGCCGTCGCT+TGG + chr1_3:1463347-1463366 None:intergenic 50.0%
GCCGAATGTGTGCCGTAATT+TGG - chr1_3:1464240-1464259 Msa0096030:intron 50.0%
GTAATTGGCGCCACCGTAAG+AGG + chr1_3:1454761-1454780 None:intergenic 55.0%
TACACGCGACCGTAAGCACT+CGG - chr1_3:1454798-1454817 Msa0096030:three_prime_UTR 55.0%
AGAGAGAAGAGAGGAGGGAG+AGG - chr1_3:1455809-1455828 Msa0096030:intron 55.0%
GAGAGAAGAGAGGAGGGAGA+GGG - chr1_3:1455810-1455829 Msa0096030:intron 55.0%
!! ATGTAGCGGACCCCACTTAG+TGG + chr1_3:1456570-1456589 None:intergenic 55.0%
ACTAAGTGGGGTCGGCAACA+TGG + chr1_3:1456599-1456618 None:intergenic 55.0%
ATGTTGCCGACCCCACTTAG+TGG - chr1_3:1456598-1456617 Msa0096030:CDS 55.0%
TGTTGCCGACCCCACTTAGT+GGG - chr1_3:1456599-1456618 Msa0096030:CDS 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr1_3:1456605-1456624 Msa0096030:CDS 55.0%
CTGGAAGGGCTCCCTTATAC+AGG - chr1_3:1457762-1457781 Msa0096030:intron 55.0%
!! CTGAGGGTGTCGTCTCGATT+AGG - chr1_3:1457937-1457956 Msa0096030:intron 55.0%
TCATGTGCGGCGGAAGAATC+GGG - chr1_3:1458485-1458504 Msa0096030:intron 55.0%
!! CAAAGCTTGCTGCTGGAGTC+TGG - chr1_3:1459181-1459200 Msa0096030:intron 55.0%
AACTCGCAGGTCTCAGTCTG+AGG + chr1_3:1459246-1459265 None:intergenic 55.0%
GTTGACGCTTTGCCACCATG+TGG - chr1_3:1459975-1459994 Msa0096030:intron 55.0%
!! GGTTTGGTGGATGAGGTGTG+GGG - chr1_3:1461236-1461255 Msa0096030:intron 55.0%
GGTGTGGGGAAGTTAAGGAG+TGG - chr1_3:1461250-1461269 Msa0096030:intron 55.0%
CATTAGGGAGTCAGGACTGC+GGG - chr1_3:1461644-1461663 Msa0096030:intron 55.0%
!! ACATGTGCCCGCTTTTACGC+AGG - chr1_3:1461893-1461912 Msa0096030:intron 55.0%
GCTGCAAGGATAGAACGTCC+TGG - chr1_3:1462291-1462310 Msa0096030:intron 55.0%
TGCCAGCAAAAGGTGAGCTG+TGG + chr1_3:1462710-1462729 None:intergenic 55.0%
! AAACCGCGAGGCTCTGATGA+TGG - chr1_3:1462783-1462802 Msa0096030:intron 55.0%
! AACCGCGAGGCTCTGATGAT+GGG - chr1_3:1462784-1462803 Msa0096030:intron 55.0%
TACCCATCATCAGAGCCTCG+CGG + chr1_3:1462789-1462808 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr1_3:1463069-1463088 Msa0096030:intron 55.0%
CTTGTCGGCACGCAGTGATT+CGG - chr1_3:1463927-1463946 Msa0096030:intron 55.0%
!! CACGCAGTGATTCGGTGCTT+AGG - chr1_3:1463935-1463954 Msa0096030:intron 55.0%
ATTGGCGCCACCGTAAGAGG+AGG + chr1_3:1454758-1454777 None:intergenic 60.0%
AAGAGAGGAGGGAGAGGGAG+AGG - chr1_3:1455815-1455834 Msa0096030:intron 60.0%
AGAGAGGAGGGAGAGGGAGA+GGG - chr1_3:1455816-1455835 Msa0096030:intron 60.0%
AGAGAAAGGAGAGAGGGGGG+AGG - chr1_3:1455897-1455916 Msa0096030:intron 60.0%
GAGAAAGGAGAGAGGGGGGA+GGG - chr1_3:1455898-1455917 Msa0096030:intron 60.0%
GGGTGGCCATGTCATACCTG+TGG - chr1_3:1458654-1458673 Msa0096030:intron 60.0%
GCAGCACGAAAGCGGATGGA+AGG + chr1_3:1459111-1459130 None:intergenic 60.0%
CTTGGCAGCACGAAAGCGGA+TGG + chr1_3:1459115-1459134 None:intergenic 60.0%
GGGACTTGGCAGCACGAAAG+CGG + chr1_3:1459119-1459138 None:intergenic 60.0%
TGGCGAAGCTCGAGCCATAC+AGG + chr1_3:1459622-1459641 None:intergenic 60.0%
GAGTCAGGACTGCGGGAACT+GGG - chr1_3:1461651-1461670 Msa0096030:intron 60.0%
! CCTCGCGGTTTTGCCCAACT+TGG + chr1_3:1462774-1462793 None:intergenic 60.0%
! CCAAGTTGGGCAAAACCGCG+AGG - chr1_3:1462771-1462790 Msa0096030:intron 60.0%
CACTTCCCACGACCAAGCGA+CGG - chr1_3:1463332-1463351 Msa0096030:intron 60.0%
ACTGGGTGGAACCAGCCACA+AGG + chr1_3:1464473-1464492 None:intergenic 60.0%
GAGGGAGAGGGAGAGGGAGA+GGG - chr1_3:1455822-1455841 Msa0096030:intron 65.0%
AGGGAGAGGGAGAGGGAGAG+GGG - chr1_3:1455823-1455842 Msa0096030:intron 65.0%
AAGGTTCCTGGCAAGGCCGG+AGG - chr1_3:1459556-1459575 Msa0096030:intron 65.0%
GGAGTCAGGACTGCGGGAAC+TGG - chr1_3:1461650-1461669 Msa0096030:intron 65.0%
CAAGGCCGTCGCTTGGTCGT+GGG + chr1_3:1463340-1463359 None:intergenic 65.0%
ACAAGGCCGTCGCTTGGTCG+TGG + chr1_3:1463341-1463360 None:intergenic 65.0%
GGAGGGAGAGGGAGAGGGAG+AGG - chr1_3:1455821-1455840 Msa0096030:intron 70.0%
GGGAGAGGGAGAGGGAGAGG+GGG - chr1_3:1455824-1455843 Msa0096030:intron 70.0%
GGTAGACCTCCGGCCTTGCC+AGG + chr1_3:1459565-1459584 None:intergenic 70.0%
AGGACTGCGGGAACTGGGCC+AGG - chr1_3:1461656-1461675 Msa0096030:intron 70.0%
ACTGCGGGAACTGGGCCAGG+TGG - chr1_3:1461659-1461678 Msa0096030:intron 70.0%
CGGTGGCGCAACCCGATCAG+AGG - chr1_3:1464011-1464030 Msa0096030:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 1454655 1464638 1454655 ID=Msa0096030;Name=Msa0096030
chr1_3 mRNA 1454655 1464638 1454655 ID=Msa0096030-mRNA-1;Parent=Msa0096030;Name=Msa0096030-mRNA-1;_AED=0.16;_eAED=0.16;_QI=78|0.88|0.94|1|0.72|0.78|19|270|656
chr1_3 exon 1454655 1454978 1454655 ID=Msa0096030-mRNA-1:exon:339;Parent=Msa0096030-mRNA-1
chr1_3 exon 1455080 1455169 1455080 ID=Msa0096030-mRNA-1:exon:338;Parent=Msa0096030-mRNA-1
chr1_3 exon 1455261 1455351 1455261 ID=Msa0096030-mRNA-1:exon:337;Parent=Msa0096030-mRNA-1
chr1_3 exon 1456479 1456663 1456479 ID=Msa0096030-mRNA-1:exon:336;Parent=Msa0096030-mRNA-1
chr1_3 exon 1456934 1457152 1456934 ID=Msa0096030-mRNA-1:exon:335;Parent=Msa0096030-mRNA-1
chr1_3 exon 1457283 1457378 1457283 ID=Msa0096030-mRNA-1:exon:334;Parent=Msa0096030-mRNA-1
chr1_3 exon 1457547 1457672 1457547 ID=Msa0096030-mRNA-1:exon:333;Parent=Msa0096030-mRNA-1
chr1_3 exon 1458561 1458657 1458561 ID=Msa0096030-mRNA-1:exon:332;Parent=Msa0096030-mRNA-1
chr1_3 exon 1459490 1459566 1459490 ID=Msa0096030-mRNA-1:exon:331;Parent=Msa0096030-mRNA-1
chr1_3 exon 1459636 1459734 1459636 ID=Msa0096030-mRNA-1:exon:330;Parent=Msa0096030-mRNA-1
chr1_3 exon 1459823 1459906 1459823 ID=Msa0096030-mRNA-1:exon:329;Parent=Msa0096030-mRNA-1
chr1_3 exon 1460000 1460191 1460000 ID=Msa0096030-mRNA-1:exon:328;Parent=Msa0096030-mRNA-1
chr1_3 exon 1460301 1460426 1460301 ID=Msa0096030-mRNA-1:exon:327;Parent=Msa0096030-mRNA-1
chr1_3 exon 1461321 1461417 1461321 ID=Msa0096030-mRNA-1:exon:326;Parent=Msa0096030-mRNA-1
chr1_3 exon 1461507 1461557 1461507 ID=Msa0096030-mRNA-1:exon:325;Parent=Msa0096030-mRNA-1
chr1_3 exon 1462095 1462173 1462095 ID=Msa0096030-mRNA-1:exon:324;Parent=Msa0096030-mRNA-1
chr1_3 exon 1462387 1462459 1462387 ID=Msa0096030-mRNA-1:exon:323;Parent=Msa0096030-mRNA-1
chr1_3 exon 1464273 1464331 1464273 ID=Msa0096030-mRNA-1:exon:322;Parent=Msa0096030-mRNA-1
chr1_3 exon 1464485 1464638 1464485 ID=Msa0096030-mRNA-1:exon:321;Parent=Msa0096030-mRNA-1
chr1_3 five_prime_UTR 1464561 1464638 1464561 ID=Msa0096030-mRNA-1:five_prime_utr;Parent=Msa0096030-mRNA-1
chr1_3 CDS 1464485 1464560 1464485 ID=Msa0096030-mRNA-1:cds;Parent=Msa0096030-mRNA-1
chr1_3 CDS 1464273 1464331 1464273 ID=Msa0096030-mRNA-1:cds;Parent=Msa0096030-mRNA-1
chr1_3 CDS 1462387 1462459 1462387 ID=Msa0096030-mRNA-1:cds;Parent=Msa0096030-mRNA-1
chr1_3 CDS 1462095 1462173 1462095 ID=Msa0096030-mRNA-1:cds;Parent=Msa0096030-mRNA-1
chr1_3 CDS 1461507 1461557 1461507 ID=Msa0096030-mRNA-1:cds;Parent=Msa0096030-mRNA-1
chr1_3 CDS 1461321 1461417 1461321 ID=Msa0096030-mRNA-1:cds;Parent=Msa0096030-mRNA-1
chr1_3 CDS 1460301 1460426 1460301 ID=Msa0096030-mRNA-1:cds;Parent=Msa0096030-mRNA-1
chr1_3 CDS 1460000 1460191 1460000 ID=Msa0096030-mRNA-1:cds;Parent=Msa0096030-mRNA-1
chr1_3 CDS 1459823 1459906 1459823 ID=Msa0096030-mRNA-1:cds;Parent=Msa0096030-mRNA-1
chr1_3 CDS 1459636 1459734 1459636 ID=Msa0096030-mRNA-1:cds;Parent=Msa0096030-mRNA-1
chr1_3 CDS 1459490 1459566 1459490 ID=Msa0096030-mRNA-1:cds;Parent=Msa0096030-mRNA-1
chr1_3 CDS 1458561 1458657 1458561 ID=Msa0096030-mRNA-1:cds;Parent=Msa0096030-mRNA-1
chr1_3 CDS 1457547 1457672 1457547 ID=Msa0096030-mRNA-1:cds;Parent=Msa0096030-mRNA-1
chr1_3 CDS 1457283 1457378 1457283 ID=Msa0096030-mRNA-1:cds;Parent=Msa0096030-mRNA-1
chr1_3 CDS 1456934 1457152 1456934 ID=Msa0096030-mRNA-1:cds;Parent=Msa0096030-mRNA-1
chr1_3 CDS 1456479 1456663 1456479 ID=Msa0096030-mRNA-1:cds;Parent=Msa0096030-mRNA-1
chr1_3 CDS 1455261 1455351 1455261 ID=Msa0096030-mRNA-1:cds;Parent=Msa0096030-mRNA-1
chr1_3 CDS 1455080 1455169 1455080 ID=Msa0096030-mRNA-1:cds;Parent=Msa0096030-mRNA-1
chr1_3 CDS 1454925 1454978 1454925 ID=Msa0096030-mRNA-1:cds;Parent=Msa0096030-mRNA-1
chr1_3 three_prime_UTR 1454655 1454924 1454655 ID=Msa0096030-mRNA-1:three_prime_utr;Parent=Msa0096030-mRNA-1
Gene Sequence

>Msa0096030

ATGTCTATGTCGGATTCTGATTCCTCCTCTTACGGTGGCGCCAATTACCAAAATTTCAAGCAAATTACACGCGACCGATTATTACACGAAATGCTAAGGTCAACAAAAACAGGGGATTCCAAATCAACTTGGAAGGTACTAATAATGGACAAACTTACTATAAAGATAATGTCTAACTCATGCAAGATGGCTGATATCACCGACGAAGTGGTTGAAGACATACACAAACGAAGGCAACCGTTACCAACAATGGATGCTATATATTTCATACAACCAACCAGAGAGAATATAATTATGTTTTTATCAGACATGGCTGGAAGGGCTCCCTTATACAGGAAGGCATTTGTTTTCCTTAGCTCACCTATTTCCAGAGAATTAGTTTTGGACATTAGAAAAGGTCTGAGGGTGTCGTCTCGATTAGGTGCATTAAGAGAGGGTTTCATCACAAATAATGAGAGAGCATTAGAGGATCTATTTGGGAATGAAGAGAATAATCGTAAAGGTGTTGCATGTTTGAATGCAATGGCAACGCGAATTGCTACAGTTTTTGCTTCATTAAGAGAATTTCCTTCCATCCGCTTTCGTGCTGCCAAGTCCCTAGACGCAAACACAATGACTACATTCCGTGATCTTGTTCCTACAAAGCTTGCTGCTGGAGTCTGGGACTGTCTTACAAAATATAAAAAAACCATACCTAATTTTCCTCAGACTGAGACCTGCGAGTTGCTCATTATTGACAGAACTATTGATCAGATTGCTCCTGTAATACATGAGTGGACATACGATGCCATGTGTCATGATTTGCTGAATATGGAGGGAAATAAATATGTTCACGAAGTTCCTGGCAAGGCCGGAGGTCTACCTGAGAGAAAAGAAGTTCTTTTGGAGGATCATGATCCTGTATGGCTCGAGCTTCGCCATGCTCATATTGCTGATGCTAGTGAACGGCTGCATGCGAAGATGACTAGCTTCATTTCAAAGAACAAAGCTGCACAAATTCAGCATGGTTCAAGAAGTAGCAGTGAAATGTCAACAAGGGACTTACAGAAGATGGTTCAAGCACTTCCACAATACAGCGAACAAATTGACAAACTCTCCCTCCATGTAGAGCTTGCAGGAAAAATTAACAGTATCATTAGGGAGTCAGGACTGCGGGAACTGGGCCAGGTGGAGCAAGATCTTGTTTTTGGAGATGCAACAATGAAAGATGTGATCAAATTTTTGACTATGAAAGAAGACACAACCCATGAAAATAAACTGCGCTTGTTAATGATTCTTGCGGCTGTTTATCCTGAGAAATTTGACGGAGAAAAGGGTCAGAATTTGATGAAGGTAGCACGGTTAACAGATGAGGATATGACTATTGTGAATAACTTGAGAATGCTTGGGGGACAACCAGATACCAAAAAACGTTTGACTGGTGCTTTCGGTCTTAAGTTTGATATCCAGAAGGTAAAGGTAATTTCTAGTAAAAAGAAGCGTGCTGCAAGGATAGAACGTCCTGGGGAAGAAGAAAAATGGCAACTATCACGCTTTTATCCCATAATAGAGGAACTCATTGAAAAACTCACGAGAAATCAACTGTCTAAGGAGGATTATCCATGTTTGAATGATCCAAGTGCAACTTTCCACAGCTCACCTTTTGCTGGCACTTTACATCAAAATCCTCATTCAATGAGATCAAGACGTACACCAAGTTGGGCAAAACCGCGAGGCTCTGATGATGGGTATTCAAGTGATTCGGTGCTTAGGCATGCTTCTAGTGATTTCAAGAAGATGGGCCAACGACTATTTGTATTCATTGTCGGTGGCGCAACCCGATCAGAGCTAAGGGCTTGCCACAAGCTTACTAGAAGGCTGAATAGGGAAATTATTCTAGGTTCATCGAGTCTTGATGATCCTGCACAATTCATCACGAAATTGAAGATGCTAACAACACATGAACTTACATTAGATGATATCCAGATATGA
Protein sequence

>Msa0096030

MSMSDSDSSSYGGANYQNFKQITRDRLLHEMLRSTKTGDSKSTWKVLIMDKLTIKIMSNSCKMADITDEVVEDIHKRRQPLPTMDAIYFIQPTRENIIMFLSDMAGRAPLYRKAFVFLSSPISRELVLDIRKGLRVSSRLGALREGFITNNERALEDLFGNEENNRKGVACLNAMATRIATVFASLREFPSIRFRAAKSLDANTMTTFRDLVPTKLAAGVWDCLTKYKKTIPNFPQTETCELLIIDRTIDQIAPVIHEWTYDAMCHDLLNMEGNKYVHEVPGKAGGLPERKEVLLEDHDPVWLELRHAHIADASERLHAKMTSFISKNKAAQIQHGSRSSSEMSTRDLQKMVQALPQYSEQIDKLSLHVELAGKINSIIRESGLRELGQVEQDLVFGDATMKDVIKFLTMKEDTTHENKLRLLMILAAVYPEKFDGEKGQNLMKVARLTDEDMTIVNNLRMLGGQPDTKKRLTGAFGLKFDIQKVKVISSKKKRAARIERPGEEEKWQLSRFYPIIEELIEKLTRNQLSKEDYPCLNDPSATFHSSPFAGTLHQNPHSMRSRRTPSWAKPRGSDDGYSSDSVLRHASSDFKKMGQRLFVFIVGGATRSELRACHKLTRRLNREIILGSSSLDDPAQFITKLKMLTTHELTLDDIQI*