Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0337670 | XP_013465191.1 | 100.000 | 223 | 0 | 0 | 1 | 223 | 1 | 223 | 4.83e-164 | 461 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0337670 | sp|Q9M5M7|RL10_EUPES | 95.413 | 218 | 10 | 0 | 1 | 218 | 1 | 218 | 9.22e-156 | 433 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa0337670 | 0.846850 | 1.676095e-59 | -8.615850e-47 |
| Msa0002790 | Msa0337670 | 0.839128 | 1.906573e-57 | -8.615850e-47 |
| Msa0045730 | Msa0337670 | 0.865062 | 7.754256e-65 | -8.615850e-47 |
| Msa0052790 | Msa0337670 | 0.814587 | 1.428353e-51 | -8.615850e-47 |
| Msa0086750 | Msa0337670 | 0.809051 | 2.290225e-50 | -8.615850e-47 |
| Msa0116130 | Msa0337670 | 0.852825 | 3.580177e-61 | -8.615850e-47 |
| Msa0116670 | Msa0337670 | 0.800430 | 1.446468e-48 | -8.615850e-47 |
| Msa0123010 | Msa0337670 | 0.800657 | 1.300467e-48 | -8.615850e-47 |
| Msa0133540 | Msa0337670 | 0.815638 | 8.343023e-52 | -8.615850e-47 |
| Msa0146340 | Msa0337670 | 0.824395 | 8.260945e-54 | -8.615850e-47 |
| Msa0181490 | Msa0337670 | 0.817811 | 2.717401e-52 | -8.615850e-47 |
| Msa0218830 | Msa0337670 | 0.844080 | 9.430657e-59 | -8.615850e-47 |
| Msa0219120 | Msa0337670 | 0.825036 | 5.833671e-54 | -8.615850e-47 |
| Msa0229150 | Msa0337670 | 0.804900 | 1.730013e-49 | -8.615850e-47 |
| Msa0258850 | Msa0337670 | 0.822408 | 2.407435e-53 | -8.615850e-47 |
| Msa0262480 | Msa0337670 | 0.812292 | 4.562955e-51 | -8.615850e-47 |
| Msa0289580 | Msa0337670 | 0.817390 | 3.380550e-52 | -8.615850e-47 |
| Msa0289610 | Msa0337670 | 0.820739 | 5.849865e-53 | -8.615850e-47 |
| Msa0297830 | Msa0337670 | 0.818977 | 1.478920e-52 | -8.615850e-47 |
| Msa0298200 | Msa0337670 | 0.821512 | 3.881188e-53 | -8.615850e-47 |
| Msa0306690 | Msa0337670 | 0.823750 | 1.170549e-53 | -8.615850e-47 |
| Msa0327330 | Msa0337670 | 0.805993 | 1.020575e-49 | -8.615850e-47 |
| Msa0335840 | Msa0337670 | 0.819524 | 1.110346e-52 | -8.615850e-47 |
| Msa0336010 | Msa0337670 | 0.812735 | 3.650385e-51 | -8.615850e-47 |
| Msa0337670 | Msa0348830 | 0.885941 | 5.264788e-72 | -8.615850e-47 |
| Msa0337670 | Msa0443390 | 0.812963 | 3.253929e-51 | -8.615850e-47 |
| Msa0337670 | Msa0471960 | 0.807187 | 5.712708e-50 | -8.615850e-47 |
| Msa0337670 | Msa0481850 | 0.859632 | 3.615669e-63 | -8.615850e-47 |
| Msa0337670 | Msa0483110 | 0.869568 | 2.808547e-66 | -8.615850e-47 |
| Msa0337670 | Msa0483390 | 0.823063 | 1.694814e-53 | -8.615850e-47 |
| Msa0337670 | Msa0526540 | 0.801918 | 7.178431e-49 | -8.615850e-47 |
| Msa0337670 | Msa0584030 | 0.840927 | 6.474854e-58 | -8.615850e-47 |
| Msa0337670 | Msa0604960 | 0.800130 | 1.664628e-48 | -8.615850e-47 |
| Msa0337670 | Msa0622750 | 0.867234 | 1.589951e-65 | -8.615850e-47 |
| Msa0337670 | Msa0623200 | 0.870694 | 1.202327e-66 | -8.615850e-47 |
| Msa0337670 | Msa0666230 | 0.809623 | 1.726754e-50 | -8.615850e-47 |
| Msa0337670 | Msa0698780 | 0.800824 | 1.202035e-48 | -8.615850e-47 |
| Msa0337670 | Msa0705800 | 0.833791 | 4.354019e-56 | -8.615850e-47 |
| Msa0337670 | Msa0706500 | 0.819930 | 8.964720e-53 | -8.615850e-47 |
| Msa0337670 | Msa0712610 | 0.879692 | 1.012843e-69 | -8.615850e-47 |
| Msa0337670 | Msa0729200 | 0.844525 | 7.163031e-59 | -8.615850e-47 |
| Msa0337670 | Msa0752910 | 0.849186 | 3.799859e-60 | -8.615850e-47 |
| Msa0337670 | Msa0769590 | 0.842895 | 1.954931e-58 | -8.615850e-47 |
| Msa0337670 | Msa0781080 | 0.850767 | 1.372412e-60 | -8.615850e-47 |
| Msa0337670 | Msa0785130 | 0.821423 | 4.070171e-53 | -8.615850e-47 |
| Msa0337670 | Msa0792420 | 0.843347 | 1.481358e-58 | -8.615850e-47 |
| Msa0337670 | Msa0806880 | 0.843975 | 1.006723e-58 | -8.615850e-47 |
| Msa0337670 | Msa0827380 | 0.813802 | 2.128603e-51 | -8.615850e-47 |
| Msa0337670 | Msa0867060 | 0.825027 | 5.861705e-54 | -8.615850e-47 |
| Msa0337670 | Msa0876170 | 0.844742 | 6.262691e-59 | -8.615850e-47 |
| Msa0337670 | Msa0888810 | 0.840669 | 7.566929e-58 | -8.615850e-47 |
| Msa0337670 | Msa0945480 | 0.802528 | 5.374279e-49 | -8.615850e-47 |
| Msa0337670 | Msa0953310 | 0.845155 | 4.844713e-59 | -8.615850e-47 |
| Msa0337670 | Msa1010310 | 0.828118 | 1.073720e-54 | -8.615850e-47 |
| Msa0337670 | Msa1019240 | 0.816962 | 4.219623e-52 | -8.615850e-47 |
| Msa0337670 | Msa1019260 | 0.820500 | 6.639104e-53 | -8.615850e-47 |
| Msa0337670 | Msa1021120 | 0.822347 | 2.486529e-53 | -8.615850e-47 |
| Msa0337670 | Msa1080350 | 0.865576 | 5.343960e-65 | -8.615850e-47 |
| Msa0337670 | Msa1094380 | 0.807657 | 4.541567e-50 | -8.615850e-47 |
| Msa0337670 | Msa1104210 | 0.810953 | 8.919508e-51 | -8.615850e-47 |
| Msa0337670 | Msa1125500 | 0.813946 | 1.978139e-51 | -8.615850e-47 |
| Msa0337670 | Msa1125860 | 0.870402 | 1.499588e-66 | -8.615850e-47 |
| Msa0337670 | Msa1126060 | 0.865537 | 5.497571e-65 | -8.615850e-47 |
| Msa0337670 | Msa1126520 | 0.827021 | 1.968781e-54 | -8.615850e-47 |
| Msa0337670 | Msa1143510 | 0.808519 | 2.976925e-50 | -8.615850e-47 |
| Msa0337670 | Msa1166870 | 0.816172 | 6.342037e-52 | -8.615850e-47 |
| Msa0337670 | Msa1173160 | 0.809832 | 1.556977e-50 | -8.615850e-47 |
| Msa0337670 | Msa1186980 | 0.831118 | 2.000633e-55 | -8.615850e-47 |
| Msa0337670 | Msa1193690 | 0.808403 | 3.151409e-50 | -8.615850e-47 |
| Msa0337670 | Msa1215820 | 0.843386 | 1.446560e-58 | -8.615850e-47 |
| Msa0337670 | Msa1228680 | 0.809229 | 2.098126e-50 | -8.615850e-47 |
| Msa0337670 | Msa1266060 | 0.823366 | 1.439667e-53 | -8.615850e-47 |
| Msa0337670 | Msa1273340 | 0.821244 | 4.475836e-53 | -8.615850e-47 |
| Msa0337670 | Msa1299590 | 0.802361 | 5.818847e-49 | -8.615850e-47 |
| Msa0337670 | Msa1321790 | 0.820694 | 5.991924e-53 | -8.615850e-47 |
| Msa0337670 | Msa1332250 | 0.811569 | 6.557236e-51 | -8.615850e-47 |
| Msa0337670 | Msa1338190 | 0.831473 | 1.636162e-55 | -8.615850e-47 |
| Msa0337670 | Msa1349570 | 0.818569 | 1.830650e-52 | -8.615850e-47 |
| Msa0337670 | Msa1356790 | 0.878877 | 1.967832e-69 | -8.615850e-47 |
| Msa0337670 | Msa1362790 | 0.882131 | 1.346842e-70 | -8.615850e-47 |
| Msa0337670 | Msa1363330 | 0.800361 | 1.494227e-48 | -8.615850e-47 |
| Msa0337670 | Msa1369190 | 0.860390 | 2.135103e-63 | -8.615850e-47 |
| Msa0337670 | Msa1374240 | 0.813617 | 2.338065e-51 | -8.615850e-47 |
| Msa0337670 | Msa1406080 | 0.817820 | 2.704977e-52 | -8.615850e-47 |
| Msa0337670 | Msa1407070 | 0.802813 | 4.694526e-49 | -8.615850e-47 |
| Msa0337670 | Msa1410440 | 0.823255 | 1.528101e-53 | -8.615850e-47 |
| Msa0337670 | Msa1413500 | 0.838225 | 3.262702e-57 | -8.615850e-47 |
| Msa0337670 | Msa1418770 | 0.818005 | 2.456662e-52 | -8.615850e-47 |
| Msa0337670 | Msa1426490 | 0.843946 | 1.024882e-58 | -8.615850e-47 |
| Msa0337670 | Msa1427560 | 0.809925 | 1.486712e-50 | -8.615850e-47 |
| Msa0337670 | Msa1455950 | 0.805914 | 1.060739e-49 | -8.615850e-47 |
| Msa0337670 | Msa1456050 | 0.855123 | 7.789197e-62 | -8.615850e-47 |
| Msa0337670 | Msa1462860 | 0.820852 | 5.509115e-53 | -8.615850e-47 |
| Msa0337670 | Msa1465260 | 0.811000 | 8.714605e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0337670 | MtrunA17_Chr2g0325151 | 100.000 | 223 | 0 | 0 | 1 | 223 | 1 | 223 | 4.44e-168 | 461 |
| Msa0337670 | MtrunA17_Chr3g0128921 | 98.649 | 222 | 3 | 0 | 1 | 222 | 1 | 222 | 1.02e-165 | 456 |
| Msa0337670 | MtrunA17_Chr3g0108371 | 93.119 | 218 | 15 | 0 | 1 | 218 | 1 | 218 | 2.85e-152 | 421 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0337670 | AT1G26910.1 | 88.991 | 218 | 24 | 0 | 1 | 218 | 1 | 218 | 1.35e-146 | 407 |
| Msa0337670 | AT1G14320.1 | 88.532 | 218 | 25 | 0 | 1 | 218 | 1 | 218 | 2.16e-145 | 404 |
| Msa0337670 | AT1G66580.1 | 88.128 | 219 | 26 | 0 | 1 | 219 | 1 | 219 | 7.56e-145 | 403 |
| Msa0337670 | AT1G26910.2 | 87.845 | 181 | 22 | 0 | 38 | 218 | 1 | 181 | 9.68e-118 | 333 |
| Msa0337670 | AT1G14320.2 | 76.596 | 94 | 20 | 1 | 127 | 218 | 31 | 124 | 1.19e-45 | 148 |
| Msa0337670 | AT1G14320.2 | 97.436 | 39 | 1 | 0 | 38 | 76 | 1 | 39 | 1.96e-20 | 83.6 |
Find 88 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAATCTATATATATATTT+AGG | 0.110733 | 2_4:-57760273 | None:intergenic |
| CCACGACAGAATCGTGATTT+TGG | 0.179385 | 2_4:-57762160 | None:intergenic |
| ACGACTCAATTCTCACAAAA+TGG | 0.201618 | 2_4:+57763415 | Msa0337670:three_prime_UTR |
| AAACCACTTTCAAGAAATTA+TGG | 0.236047 | 2_4:+57760199 | Msa0337670:five_prime_UTR |
| TATATATATATTTAGGGTTT+AGG | 0.247570 | 2_4:-57760266 | None:intergenic |
| TATATTTAGGGTTTAGGTTT+TGG | 0.252043 | 2_4:-57760260 | None:intergenic |
| AAATTATGGATATAGATTTA+TGG | 0.263435 | 2_4:+57760213 | Msa0337670:five_prime_UTR |
| TTCTCACATCAAATACTAAA+AGG | 0.270230 | 2_4:-57763313 | None:intergenic |
| AAAATCTATATATATATTTA+GGG | 0.301012 | 2_4:-57760272 | None:intergenic |
| ACATCGTAAATCCTGATCTT+AGG | 0.319740 | 2_4:-57762193 | None:intergenic |
| CGTGAGATTGCAAGTAGATT+TGG | 0.321079 | 2_4:-57763395 | None:intergenic |
| CTTTGACATGTACTTGTTGC+AGG | 0.330350 | 2_4:-57762320 | None:intergenic |
| TGGGTTCAGTTTCTGAGAAT+TGG | 0.337993 | 2_4:+57763435 | Msa0337670:three_prime_UTR |
| TTGGTTAGATACTGGGCTTA+TGG | 0.352344 | 2_4:-57760241 | None:intergenic |
| GTTTCCTTTCTGTGTTCATC+TGG | 0.355959 | 2_4:+57762243 | Msa0337670:CDS |
| CTGTGTTCATCTGGTCAGTT+GGG | 0.370061 | 2_4:+57762252 | Msa0337670:CDS |
| ACTGGTATGAGAGGTGCTTT+TGG | 0.372976 | 2_4:+57762445 | Msa0337670:CDS |
| ATGCATTCCACTTGAGAGTC+AGG | 0.376262 | 2_4:+57762356 | Msa0337670:CDS |
| GTTTGTGCTAGAGTGGCTAT+TGG | 0.382737 | 2_4:+57762481 | Msa0337670:CDS |
| TTTCATGTGCTGGTGCTGAT+AGG | 0.390293 | 2_4:+57762416 | Msa0337670:CDS |
| TCTGTGTTCATCTGGTCAGT+TGG | 0.393251 | 2_4:+57762251 | Msa0337670:CDS |
| CAAGGAACGCAGCGCAGCCA+TGG | 0.401788 | 2_4:+57760343 | Msa0337670:exon |
| ACCTTAGCATTCACCCCATC+GGG | 0.415318 | 2_4:-57762807 | None:intergenic |
| TTTGTGCTAGAGTGGCTATT+GGG | 0.420431 | 2_4:+57762482 | Msa0337670:CDS |
| TATCCATAATTTCTTGAAAG+TGG | 0.421925 | 2_4:-57760202 | None:intergenic |
| TTGCAGCTTCTTGGATGCCA+TGG | 0.430564 | 2_4:+57763054 | Msa0337670:intron |
| CGACTCAATTCTCACAAAAT+GGG | 0.447416 | 2_4:+57763416 | Msa0337670:three_prime_UTR |
| TTAGATACTGGGCTTATGGA+TGG | 0.448359 | 2_4:-57760237 | None:intergenic |
| CGATGTTGGCATGAAGAAGA+AGG | 0.456800 | 2_4:+57762210 | Msa0337670:CDS |
| TGAGTATCTGAAGTTGAAAT+CGG | 0.458837 | 2_4:+57762770 | Msa0337670:CDS |
| CATGTCAAAGTTTGCAGGAA+AGG | 0.460338 | 2_4:+57762333 | Msa0337670:CDS |
| ATGGCTTGTTCTTAATTTGA+CGG | 0.461186 | 2_4:-57762135 | None:intergenic |
| CGTGCTAAGTTTAAGTTCCC+TGG | 0.464822 | 2_4:+57762568 | Msa0337670:CDS |
| TGCTAGAGTGGCTATTGGGC+AGG | 0.472691 | 2_4:+57762486 | Msa0337670:CDS |
| AAGTACATGTCAAAGTTTGC+AGG | 0.473692 | 2_4:+57762328 | Msa0337670:CDS |
| TCTTGGATGCCATGGACCAT+TGG | 0.486612 | 2_4:+57763062 | Msa0337670:CDS |
| TAAATCCTGATCTTAGGATC+AGG | 0.495721 | 2_4:-57762187 | None:intergenic |
| TACCTTAGCATTCACCCCAT+CGG | 0.499742 | 2_4:-57762808 | None:intergenic |
| GAACTCAAATTAACAAAGTA+CGG | 0.499868 | 2_4:-57763217 | None:intergenic |
| TGCCAGCTGTAATGAGGCTT+AGG | 0.501937 | 2_4:+57763116 | Msa0337670:CDS |
| TTTGAATGCCAGCTGTAATG+AGG | 0.503491 | 2_4:+57763110 | Msa0337670:CDS |
| TTAGGTCTTACTTCTTCCCA+TGG | 0.506519 | 2_4:-57760360 | None:intergenic |
| AAGGAACGCAGCGCAGCCAT+GGG | 0.507562 | 2_4:+57760344 | Msa0337670:exon |
| TAACATAAATCATAAATTCA+AGG | 0.511918 | 2_4:-57763264 | None:intergenic |
| TCTTGTTGATCCTGAGTACA+TGG | 0.512666 | 2_4:-57762390 | None:intergenic |
| AACAAGATGCTTTCATGTGC+TGG | 0.512686 | 2_4:+57762406 | Msa0337670:CDS |
| CCATTGGCTAACCGTCAACC+TGG | 0.512794 | 2_4:+57763078 | Msa0337670:CDS |
| CAACAACAGCCACCATGCTC+AGG | 0.521206 | 2_4:+57762534 | Msa0337670:CDS |
| TCAAAGAGACCAAATCTCAA+TGG | 0.524148 | 2_4:-57763346 | None:intergenic |
| GCTCCTTTCTGTCCGTTGCA+AGG | 0.530827 | 2_4:+57762510 | Msa0337670:CDS |
| AGATCATCGTTAGCAGGAAG+TGG | 0.534059 | 2_4:+57762599 | Msa0337670:CDS |
| AGCCTAAGCCTCATTACAGC+TGG | 0.535691 | 2_4:-57763118 | None:intergenic |
| GTCAAAAGATCATCGTTAGC+AGG | 0.537568 | 2_4:+57762593 | Msa0337670:CDS |
| TGTCCTTGCAACGGACAGAA+AGG | 0.541207 | 2_4:-57762513 | None:intergenic |
| GAGTTCCTGATCCTAAGATC+AGG | 0.544600 | 2_4:+57762182 | Msa0337670:CDS |
| CCAGGTTGACGGTTAGCCAA+TGG | 0.544617 | 2_4:-57763078 | None:intergenic |
| TCAGGGTGTTTGTGCTAGAG+TGG | 0.548804 | 2_4:+57762474 | Msa0337670:CDS |
| AAAACAGAATTATGCCCGAT+GGG | 0.552482 | 2_4:+57762793 | Msa0337670:CDS |
| GACGGAGAGCCTCCTGAGCA+TGG | 0.554611 | 2_4:-57762546 | None:intergenic |
| AAGATCAGGATTTACGATGT+TGG | 0.557539 | 2_4:+57762196 | Msa0337670:CDS |
| CAAGATTGATTTGATTTGTG+CGG | 0.558004 | 2_4:-57760300 | None:intergenic |
| GACGGTTAGCCAATGGTCCA+TGG | 0.564761 | 2_4:-57763071 | None:intergenic |
| GGCTGTTGTTGTCCTTGCAA+CGG | 0.568368 | 2_4:-57762522 | None:intergenic |
| GGTGCTGATAGGCTTCAAAC+TGG | 0.570540 | 2_4:+57762427 | Msa0337670:CDS |
| TCATCTGGTCAGTTGGGAGA+AGG | 0.572889 | 2_4:+57762258 | Msa0337670:CDS |
| CTGACCAGATGAACACAGAA+AGG | 0.573863 | 2_4:-57762247 | None:intergenic |
| AGGAGACAGCACAGGACGCA+AGG | 0.573942 | 2_4:+57760325 | Msa0337670:five_prime_UTR |
| ATTTGACGGTAACACCTAGC+AGG | 0.579048 | 2_4:-57762121 | None:intergenic |
| TAGATACTGGGCTTATGGAT+GGG | 0.579484 | 2_4:-57760236 | None:intergenic |
| TCAACTTCAGATACTCAGCT+CGG | 0.581935 | 2_4:-57762764 | None:intergenic |
| GCCCGATGGGGTGAATGCTA+AGG | 0.582072 | 2_4:+57762806 | Msa0337670:CDS |
| TTCATCCATTCCATGTACTC+AGG | 0.583517 | 2_4:+57762380 | Msa0337670:CDS |
| TGCATTCCACTTGAGAGTCA+GGG | 0.588140 | 2_4:+57762357 | Msa0337670:CDS |
| CAACAGCCACCATGCTCAGG+AGG | 0.593303 | 2_4:+57762537 | Msa0337670:CDS |
| GTGAGGCACTTGAAGCTGCT+AGG | 0.594487 | 2_4:+57762293 | Msa0337670:CDS |
| CAAATCAAATCAATCTTGCA+AGG | 0.595587 | 2_4:+57760305 | Msa0337670:five_prime_UTR |
| GATGAACCCTGACTCTCAAG+TGG | 0.599276 | 2_4:-57762363 | None:intergenic |
| AGGCTTCAAACTGGTATGAG+AGG | 0.600097 | 2_4:+57762436 | Msa0337670:CDS |
| CCAAAATCACGATTCTGTCG+TGG | 0.626637 | 2_4:+57762160 | Msa0337670:CDS |
| GAAAACAGAATTATGCCCGA+TGG | 0.626773 | 2_4:+57762792 | Msa0337670:CDS |
| TTGATCCTGAGTACATGGAA+TGG | 0.632244 | 2_4:-57762385 | None:intergenic |
| GATGTTGGCATGAAGAAGAA+GGG | 0.638141 | 2_4:+57762211 | Msa0337670:CDS |
| GAAGGAAAATGTCTCAAGTG+AGG | 0.670840 | 2_4:+57762276 | Msa0337670:CDS |
| ATCTTGCAAGGAGACAGCAC+AGG | 0.680122 | 2_4:+57760317 | Msa0337670:five_prime_UTR |
| AAACAGAATTATGCCCGATG+GGG | 0.689778 | 2_4:+57762794 | Msa0337670:CDS |
| GGAGAGCCTCCTGAGCATGG+TGG | 0.689789 | 2_4:-57762543 | None:intergenic |
| GGAACTTAAACTTAGCACGA+CGG | 0.721521 | 2_4:-57762564 | None:intergenic |
| ACTCTAGCACAAACACCCTG+AGG | 0.744760 | 2_4:-57762472 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAATCTATATATATATTT+AGG | - | chr2_4:57760276-57760295 | None:intergenic | 10.0% |
| !! | TGTAACAAATAATATATTAA+GGG | - | chr2_4:57760854-57760873 | None:intergenic | 10.0% |
| !!! | TATTTTCAAATATTAGTTTT+TGG | + | chr2_4:57763148-57763167 | Msa0337670:three_prime_UTR | 10.0% |
| !!! | ATTTATGTTATATTTTGTTA+TGG | + | chr2_4:57763277-57763296 | Msa0337670:three_prime_UTR | 10.0% |
| !! | AATTAAAAAAAAAATCTAGT+TGG | - | chr2_4:57763511-57763530 | None:intergenic | 10.0% |
| !!! | TAGATTTTTTTTTTAATTGT+TGG | + | chr2_4:57763513-57763532 | Msa0337670:three_prime_UTR | 10.0% |
| !! | AAATTATGGATATAGATTTA+TGG | + | chr2_4:57760213-57760232 | Msa0337670:five_prime_UTR | 15.0% |
| !!! | TATATATATATTTAGGGTTT+AGG | - | chr2_4:57760269-57760288 | None:intergenic | 15.0% |
| !!! | TGATTTGTGATTTAAAATTT+AGG | + | chr2_4:57760590-57760609 | Msa0337670:intron | 15.0% |
| !!! | GATTTGTGATTTAAAATTTA+GGG | + | chr2_4:57760591-57760610 | Msa0337670:intron | 15.0% |
| !! | TTAAATTAATTGAGAATTTG+AGG | + | chr2_4:57760726-57760745 | Msa0337670:intron | 15.0% |
| !! | CTGTAACAAATAATATATTA+AGG | - | chr2_4:57760855-57760874 | None:intergenic | 15.0% |
| !! | TTACATTCAAAATATAAACA+GGG | - | chr2_4:57761515-57761534 | None:intergenic | 15.0% |
| !! | ATTACATTCAAAATATAAAC+AGG | - | chr2_4:57761516-57761535 | None:intergenic | 15.0% |
| !! | TTTCATAAAAATTAGTACTT+GGG | - | chr2_4:57761772-57761791 | None:intergenic | 15.0% |
| !! | ATTTCATAAAAATTAGTACT+TGG | - | chr2_4:57761773-57761792 | None:intergenic | 15.0% |
| !!! | ATCATGTTTGTTTTATTTAT+AGG | + | chr2_4:57762097-57762116 | Msa0337670:intron | 15.0% |
| !!! | TCATGTTTGTTTTATTTATA+GGG | + | chr2_4:57762098-57762117 | Msa0337670:intron | 15.0% |
| !! | TAACATAAATCATAAATTCA+AGG | - | chr2_4:57763267-57763286 | None:intergenic | 15.0% |
| !! | AAATGAATGAAAATTAGAAG+GGG | - | chr2_4:57760387-57760406 | None:intergenic | 20.0% |
| !! | GAAATGAATGAAAATTAGAA+GGG | - | chr2_4:57760388-57760407 | None:intergenic | 20.0% |
| !! | AGAAATGAATGAAAATTAGA+AGG | - | chr2_4:57760389-57760408 | None:intergenic | 20.0% |
| !! | AAATGAAATGAAGAAACAAA+TGG | - | chr2_4:57760438-57760457 | None:intergenic | 20.0% |
| !! | ATTGAAATAAAACGAATTCA+TGG | - | chr2_4:57760461-57760480 | None:intergenic | 20.0% |
| !!! | AGATATGATGATGTTTATAT+TGG | + | chr2_4:57760489-57760508 | Msa0337670:intron | 20.0% |
| !! | AAAGGTTTACTAAAACATAA+AGG | - | chr2_4:57761014-57761033 | None:intergenic | 20.0% |
| !!! | ACCTTTTTGATTTTTTATTG+CGG | + | chr2_4:57761028-57761047 | Msa0337670:intron | 20.0% |
| !! | AATGATGATATTTATCCATA+CGG | + | chr2_4:57761210-57761229 | Msa0337670:intron | 20.0% |
| !!! | TGAATGTCATGATATTTTAA+TGG | + | chr2_4:57762005-57762024 | Msa0337670:intron | 20.0% |
| !! | CAATAATTAGAGTTAATACA+TGG | - | chr2_4:57762705-57762724 | None:intergenic | 20.0% |
| !!! | ATGTTAGTTTGGAATATATT+AGG | + | chr2_4:57762920-57762939 | Msa0337670:intron | 20.0% |
| !!! | TGTTAGTTTGGAATATATTA+GGG | + | chr2_4:57762921-57762940 | Msa0337670:intron | 20.0% |
| !!! | AAAAGAACTTATAAGTTGAA+AGG | - | chr2_4:57763028-57763047 | None:intergenic | 20.0% |
| !! | TATTTGATGTGAGAAAAAAA+AGG | + | chr2_4:57763321-57763340 | Msa0337670:three_prime_UTR | 20.0% |
| ! | AAACCACTTTCAAGAAATTA+TGG | + | chr2_4:57760199-57760218 | Msa0337670:five_prime_UTR | 25.0% |
| ! | TATCCATAATTTCTTGAAAG+TGG | - | chr2_4:57760205-57760224 | None:intergenic | 25.0% |
| !!! | TATATTTAGGGTTTAGGTTT+TGG | - | chr2_4:57760263-57760282 | None:intergenic | 25.0% |
| ! | TAATATATTAAGGGTCTGTT+TGG | - | chr2_4:57760845-57760864 | None:intergenic | 25.0% |
| ! | ATGATTATCCTATTATTGTG+TGG | + | chr2_4:57760906-57760925 | Msa0337670:intron | 25.0% |
| ! | GAACTAACAAACAATTACAA+TGG | - | chr2_4:57760932-57760951 | None:intergenic | 25.0% |
| !! | TGTTGTTTATTGATGAATTC+AGG | + | chr2_4:57760969-57760988 | Msa0337670:intron | 25.0% |
| ! | ACCGCAATAAAAAATCAAAA+AGG | - | chr2_4:57761032-57761051 | None:intergenic | 25.0% |
| ! | TCCATTATGTATTATGTGTT+GGG | - | chr2_4:57761128-57761147 | None:intergenic | 25.0% |
| ! | ACAGTATAATCAGAATAGTA+AGG | - | chr2_4:57761637-57761656 | None:intergenic | 25.0% |
| !! | GTGATATTTCTGAATAATCA+CGG | - | chr2_4:57761888-57761907 | None:intergenic | 25.0% |
| ! | TAACTTGAATCATGTTAGTT+TGG | + | chr2_4:57762909-57762928 | Msa0337670:intron | 25.0% |
| !! | TTTTTGCAAGAATGAATATG+AGG | + | chr2_4:57763182-57763201 | Msa0337670:three_prime_UTR | 25.0% |
| ! | GAACTCAAATTAACAAAGTA+CGG | - | chr2_4:57763220-57763239 | None:intergenic | 25.0% |
| ! | TTCTCACATCAAATACTAAA+AGG | - | chr2_4:57763316-57763335 | None:intergenic | 25.0% |
| !!! | TTAGGTTTTGGTTAGATACT+GGG | - | chr2_4:57760251-57760270 | None:intergenic | 30.0% |
| !!! | TTTAGGTTTTGGTTAGATAC+TGG | - | chr2_4:57760252-57760271 | None:intergenic | 30.0% |
| !! | CAAGATTGATTTGATTTGTG+CGG | - | chr2_4:57760303-57760322 | None:intergenic | 30.0% |
| CAAATCAAATCAATCTTGCA+AGG | + | chr2_4:57760305-57760324 | Msa0337670:five_prime_UTR | 30.0% | |
| ATGAAAATTAGAAGGGGATT+AGG | - | chr2_4:57760381-57760400 | None:intergenic | 30.0% | |
| ! | TTTTGAATCAATTGCTCGTT+TGG | + | chr2_4:57760772-57760791 | Msa0337670:intron | 30.0% |
| !!! | TTGATTTTTTATTGCGGTAG+TGG | + | chr2_4:57761034-57761053 | Msa0337670:intron | 30.0% |
| TAGTAAGATCAAATTGAGCA+TGG | - | chr2_4:57761100-57761119 | None:intergenic | 30.0% | |
| TCCCAACACATAATACATAA+TGG | + | chr2_4:57761124-57761143 | Msa0337670:intron | 30.0% | |
| CTCCATTATGTATTATGTGT+TGG | - | chr2_4:57761129-57761148 | None:intergenic | 30.0% | |
| ! | CTATCATTCTTTGTTGTCTT+TGG | + | chr2_4:57761162-57761181 | Msa0337670:intron | 30.0% |
| ! | TAGCTTGACATTTCGTTTTA+CGG | + | chr2_4:57761417-57761436 | Msa0337670:intron | 30.0% |
| AACAGGGAATTAGTAACAAT+AGG | - | chr2_4:57761499-57761518 | None:intergenic | 30.0% | |
| TTAGTACTTGGGTATATCTA+TGG | - | chr2_4:57761761-57761780 | None:intergenic | 30.0% | |
| ACGGTATAATCAGAATAGTA+AGG | - | chr2_4:57761869-57761888 | None:intergenic | 30.0% | |
| TCAGAAATATCACCATCTTT+CGG | + | chr2_4:57761895-57761914 | Msa0337670:intron | 30.0% | |
| !! | ATGGCTTGTTCTTAATTTGA+CGG | - | chr2_4:57762138-57762157 | None:intergenic | 30.0% |
| ACAAATCTACAATCGAAGTA+AGG | - | chr2_4:57762650-57762669 | None:intergenic | 30.0% | |
| TTGTTTGTAATGCTTCTTCA+GGG | + | chr2_4:57762725-57762744 | Msa0337670:intron | 30.0% | |
| ! | TGAGTATCTGAAGTTGAAAT+CGG | + | chr2_4:57762770-57762789 | Msa0337670:CDS | 30.0% |
| ! | ATATTTTCTTCCTCATGCTA+AGG | + | chr2_4:57762871-57762890 | Msa0337670:intron | 30.0% |
| AATCTGTTTGAACACTCAAA+TGG | + | chr2_4:57762966-57762985 | Msa0337670:intron | 30.0% | |
| AAAAAGGTTCCATTGAGATT+TGG | + | chr2_4:57763337-57763356 | Msa0337670:three_prime_UTR | 30.0% | |
| AGAGAGATCAGAAATTGGAA+GGG | - | chr2_4:57760546-57760565 | None:intergenic | 35.0% | |
| AAGAGAGATCAGAAATTGGA+AGG | - | chr2_4:57760547-57760566 | None:intergenic | 35.0% | |
| CTGAAAGAGAGATCAGAAAT+TGG | - | chr2_4:57760551-57760570 | None:intergenic | 35.0% | |
| TATTAAGGGTCTGTTTGGAT+TGG | - | chr2_4:57760840-57760859 | None:intergenic | 35.0% | |
| TACAATGGCCACACAATAAT+AGG | - | chr2_4:57760917-57760936 | None:intergenic | 35.0% | |
| !!! | TGTTCGTCAACTTTTTTACC+AGG | + | chr2_4:57761065-57761084 | Msa0337670:intron | 35.0% |
| TCATCAAAAACAGAACCGTA+TGG | - | chr2_4:57761228-57761247 | None:intergenic | 35.0% | |
| TTCTAGACATCAGATACCAT+AGG | - | chr2_4:57761381-57761400 | None:intergenic | 35.0% | |
| ! | AGCTTGACATTTCGTTTTAC+GGG | + | chr2_4:57761418-57761437 | Msa0337670:intron | 35.0% |
| ! | GGGATAGATCAAACTTTTAC+AGG | + | chr2_4:57761439-57761458 | Msa0337670:intron | 35.0% |
| ! | GTCGAAAGATGGTGATATTT+TGG | - | chr2_4:57761667-57761686 | None:intergenic | 35.0% |
| !! | TTTTATTTATAGGGCCTGCT+AGG | + | chr2_4:57762107-57762126 | Msa0337670:intron | 35.0% |
| ! | CAGAATCGTGATTTTGGATA+TGG | - | chr2_4:57762157-57762176 | None:intergenic | 35.0% |
| TAAATCCTGATCTTAGGATC+AGG | - | chr2_4:57762190-57762209 | None:intergenic | 35.0% | |
| ACATCGTAAATCCTGATCTT+AGG | - | chr2_4:57762196-57762215 | None:intergenic | 35.0% | |
| AAGATCAGGATTTACGATGT+TGG | + | chr2_4:57762196-57762215 | Msa0337670:CDS | 35.0% | |
| AAGTACATGTCAAAGTTTGC+AGG | + | chr2_4:57762328-57762347 | Msa0337670:CDS | 35.0% | |
| ! | TGCTAACGATGATCTTTTGA+CGG | - | chr2_4:57762594-57762613 | None:intergenic | 35.0% |
| TCGATTGTAGATTTGTAGTC+TGG | + | chr2_4:57762654-57762673 | Msa0337670:intron | 35.0% | |
| CGATTGTAGATTTGTAGTCT+GGG | + | chr2_4:57762655-57762674 | Msa0337670:intron | 35.0% | |
| GTTGTTTGTAATGCTTCTTC+AGG | + | chr2_4:57762724-57762743 | Msa0337670:intron | 35.0% | |
| TGTTTGTAATGCTTCTTCAG+GGG | + | chr2_4:57762726-57762745 | Msa0337670:intron | 35.0% | |
| AAAACAGAATTATGCCCGAT+GGG | + | chr2_4:57762793-57762812 | Msa0337670:CDS | 35.0% | |
| ! | TTTGTGATTTTGCAGCTTCT+TGG | + | chr2_4:57763045-57763064 | Msa0337670:intron | 35.0% |
| TCAAAGAGACCAAATCTCAA+TGG | - | chr2_4:57763349-57763368 | None:intergenic | 35.0% | |
| ACGACTCAATTCTCACAAAA+TGG | + | chr2_4:57763415-57763434 | Msa0337670:three_prime_UTR | 35.0% | |
| CGACTCAATTCTCACAAAAT+GGG | + | chr2_4:57763416-57763435 | Msa0337670:three_prime_UTR | 35.0% | |
| TAGATACTGGGCTTATGGAT+GGG | - | chr2_4:57760239-57760258 | None:intergenic | 40.0% | |
| TTAGATACTGGGCTTATGGA+TGG | - | chr2_4:57760240-57760259 | None:intergenic | 40.0% | |
| TTGGTTAGATACTGGGCTTA+TGG | - | chr2_4:57760244-57760263 | None:intergenic | 40.0% | |
| TTAGGTCTTACTTCTTCCCA+TGG | - | chr2_4:57760363-57760382 | None:intergenic | 40.0% | |
| GAGAGATCAGAAATTGGAAG+GGG | - | chr2_4:57760545-57760564 | None:intergenic | 40.0% | |
| ! | ATAGCTTGCAAGAGATCAGA+TGG | - | chr2_4:57761269-57761288 | None:intergenic | 40.0% |
| TGCGTCATGTATATTGCCTA+TGG | + | chr2_4:57761362-57761381 | Msa0337670:intron | 40.0% | |
| ! | GCTTGACATTTCGTTTTACG+GGG | + | chr2_4:57761419-57761438 | Msa0337670:intron | 40.0% |
| GATGTTGGCATGAAGAAGAA+GGG | + | chr2_4:57762211-57762230 | Msa0337670:CDS | 40.0% | |
| GTTTCCTTTCTGTGTTCATC+TGG | + | chr2_4:57762243-57762262 | Msa0337670:CDS | 40.0% | |
| GAAGGAAAATGTCTCAAGTG+AGG | + | chr2_4:57762276-57762295 | Msa0337670:CDS | 40.0% | |
| ! | CTTTGACATGTACTTGTTGC+AGG | - | chr2_4:57762323-57762342 | None:intergenic | 40.0% |
| CATGTCAAAGTTTGCAGGAA+AGG | + | chr2_4:57762333-57762352 | Msa0337670:CDS | 40.0% | |
| TTCATCCATTCCATGTACTC+AGG | + | chr2_4:57762380-57762399 | Msa0337670:CDS | 40.0% | |
| TTGATCCTGAGTACATGGAA+TGG | - | chr2_4:57762388-57762407 | None:intergenic | 40.0% | |
| TCTTGTTGATCCTGAGTACA+TGG | - | chr2_4:57762393-57762412 | None:intergenic | 40.0% | |
| AACAAGATGCTTTCATGTGC+TGG | + | chr2_4:57762406-57762425 | Msa0337670:CDS | 40.0% | |
| TTTGTGCTAGAGTGGCTATT+GGG | + | chr2_4:57762482-57762501 | Msa0337670:CDS | 40.0% | |
| GGAACTTAAACTTAGCACGA+CGG | - | chr2_4:57762567-57762586 | None:intergenic | 40.0% | |
| GTCAAAAGATCATCGTTAGC+AGG | + | chr2_4:57762593-57762612 | Msa0337670:CDS | 40.0% | |
| ! | TTTGTAGTCTGGGATTACTC+TGG | + | chr2_4:57762665-57762684 | Msa0337670:intron | 40.0% |
| TCAACTTCAGATACTCAGCT+CGG | - | chr2_4:57762767-57762786 | None:intergenic | 40.0% | |
| GAAAACAGAATTATGCCCGA+TGG | + | chr2_4:57762792-57762811 | Msa0337670:CDS | 40.0% | |
| AAACAGAATTATGCCCGATG+GGG | + | chr2_4:57762794-57762813 | Msa0337670:CDS | 40.0% | |
| AAGTACATGTCCTTAGCATG+AGG | - | chr2_4:57762884-57762903 | None:intergenic | 40.0% | |
| ! | AAAAAGCTCTTCCAGGTTGA+CGG | - | chr2_4:57763092-57763111 | None:intergenic | 40.0% |
| GCATTCAAAAAAGCTCTTCC+AGG | - | chr2_4:57763099-57763118 | None:intergenic | 40.0% | |
| TTTGAATGCCAGCTGTAATG+AGG | + | chr2_4:57763110-57763129 | Msa0337670:CDS | 40.0% | |
| CGTGAGATTGCAAGTAGATT+TGG | - | chr2_4:57763398-57763417 | None:intergenic | 40.0% | |
| ! | TGGGTTCAGTTTCTGAGAAT+TGG | + | chr2_4:57763435-57763454 | Msa0337670:three_prime_UTR | 40.0% |
| GTCACGGTGAATCAGAAACA+CGG | - | chr2_4:57760516-57760535 | None:intergenic | 45.0% | |
| ! | TTTTACAGGTCTTGCGACAC+AGG | + | chr2_4:57761453-57761472 | Msa0337670:intron | 45.0% |
| CTGCAATCTCAGTCGAAAGA+TGG | - | chr2_4:57761678-57761697 | None:intergenic | 45.0% | |
| ATGCAATCTCAGCCGAAAGA+TGG | - | chr2_4:57761910-57761929 | None:intergenic | 45.0% | |
| ATTTGACGGTAACACCTAGC+AGG | - | chr2_4:57762124-57762143 | None:intergenic | 45.0% | |
| ! | CCACGACAGAATCGTGATTT+TGG | - | chr2_4:57762163-57762182 | None:intergenic | 45.0% |
| CCAAAATCACGATTCTGTCG+TGG | + | chr2_4:57762160-57762179 | Msa0337670:CDS | 45.0% | |
| GAGTTCCTGATCCTAAGATC+AGG | + | chr2_4:57762182-57762201 | Msa0337670:CDS | 45.0% | |
| CGATGTTGGCATGAAGAAGA+AGG | + | chr2_4:57762210-57762229 | Msa0337670:CDS | 45.0% | |
| CTGACCAGATGAACACAGAA+AGG | - | chr2_4:57762250-57762269 | None:intergenic | 45.0% | |
| TCTGTGTTCATCTGGTCAGT+TGG | + | chr2_4:57762251-57762270 | Msa0337670:CDS | 45.0% | |
| CTGTGTTCATCTGGTCAGTT+GGG | + | chr2_4:57762252-57762271 | Msa0337670:CDS | 45.0% | |
| ATGCATTCCACTTGAGAGTC+AGG | + | chr2_4:57762356-57762375 | Msa0337670:CDS | 45.0% | |
| TGCATTCCACTTGAGAGTCA+GGG | + | chr2_4:57762357-57762376 | Msa0337670:CDS | 45.0% | |
| !! | TTTCATGTGCTGGTGCTGAT+AGG | + | chr2_4:57762416-57762435 | Msa0337670:CDS | 45.0% |
| AGGCTTCAAACTGGTATGAG+AGG | + | chr2_4:57762436-57762455 | Msa0337670:CDS | 45.0% | |
| !!! | ACTGGTATGAGAGGTGCTTT+TGG | + | chr2_4:57762445-57762464 | Msa0337670:CDS | 45.0% |
| GTTTGTGCTAGAGTGGCTAT+TGG | + | chr2_4:57762481-57762500 | Msa0337670:CDS | 45.0% | |
| ! | CGTGCTAAGTTTAAGTTCCC+TGG | + | chr2_4:57762568-57762587 | Msa0337670:CDS | 45.0% |
| AGATCATCGTTAGCAGGAAG+TGG | + | chr2_4:57762599-57762618 | Msa0337670:CDS | 45.0% | |
| TACCTTAGCATTCACCCCAT+CGG | - | chr2_4:57762811-57762830 | None:intergenic | 45.0% | |
| !! | AAAATCTATATATATATTTA+GGG | - | chr2_4:57760275-57760294 | None:intergenic | 5.0% |
| ATCTTGCAAGGAGACAGCAC+AGG | + | chr2_4:57760317-57760336 | Msa0337670:five_prime_UTR | 50.0% | |
| TTGGAAGGGGTTGTCTGTCA+CGG | - | chr2_4:57760532-57760551 | None:intergenic | 50.0% | |
| TCATCTGGTCAGTTGGGAGA+AGG | + | chr2_4:57762258-57762277 | Msa0337670:CDS | 50.0% | |
| GATGAACCCTGACTCTCAAG+TGG | - | chr2_4:57762366-57762385 | None:intergenic | 50.0% | |
| !! | GGTGCTGATAGGCTTCAAAC+TGG | + | chr2_4:57762427-57762446 | Msa0337670:CDS | 50.0% |
| ! | AGGTGCTTTTGGTAAGCCTC+AGG | + | chr2_4:57762456-57762475 | Msa0337670:CDS | 50.0% |
| ! | GGTGCTTTTGGTAAGCCTCA+GGG | + | chr2_4:57762457-57762476 | Msa0337670:CDS | 50.0% |
| ACTCTAGCACAAACACCCTG+AGG | - | chr2_4:57762475-57762494 | None:intergenic | 50.0% | |
| ! | TCAGGGTGTTTGTGCTAGAG+TGG | + | chr2_4:57762474-57762493 | Msa0337670:CDS | 50.0% |
| TGTCCTTGCAACGGACAGAA+AGG | - | chr2_4:57762516-57762535 | None:intergenic | 50.0% | |
| GGCTGTTGTTGTCCTTGCAA+CGG | - | chr2_4:57762525-57762544 | None:intergenic | 50.0% | |
| ! | CGATGATCTTTTGACGGCCA+GGG | - | chr2_4:57762588-57762607 | None:intergenic | 50.0% |
| ! | ACGATGATCTTTTGACGGCC+AGG | - | chr2_4:57762589-57762608 | None:intergenic | 50.0% |
| ACCTTAGCATTCACCCCATC+GGG | - | chr2_4:57762810-57762829 | None:intergenic | 50.0% | |
| TTGCAGCTTCTTGGATGCCA+TGG | + | chr2_4:57763054-57763073 | Msa0337670:intron | 50.0% | |
| TCTTGGATGCCATGGACCAT+TGG | + | chr2_4:57763062-57763081 | Msa0337670:CDS | 50.0% | |
| TGCCAGCTGTAATGAGGCTT+AGG | + | chr2_4:57763116-57763135 | Msa0337670:CDS | 50.0% | |
| AGCCTAAGCCTCATTACAGC+TGG | - | chr2_4:57763121-57763140 | None:intergenic | 50.0% | |
| TGAGCATGGCAAACAGTGCC+TGG | - | chr2_4:57761086-57761105 | None:intergenic | 55.0% | |
| ! | GTGAGGCACTTGAAGCTGCT+AGG | + | chr2_4:57762293-57762312 | Msa0337670:CDS | 55.0% |
| TGCTAGAGTGGCTATTGGGC+AGG | + | chr2_4:57762486-57762505 | Msa0337670:CDS | 55.0% | |
| GCTCCTTTCTGTCCGTTGCA+AGG | + | chr2_4:57762510-57762529 | Msa0337670:CDS | 55.0% | |
| CAACAACAGCCACCATGCTC+AGG | + | chr2_4:57762534-57762553 | Msa0337670:CDS | 55.0% | |
| ! | GACGGTTAGCCAATGGTCCA+TGG | - | chr2_4:57763074-57763093 | None:intergenic | 55.0% |
| ! | CCAGGTTGACGGTTAGCCAA+TGG | - | chr2_4:57763081-57763100 | None:intergenic | 55.0% |
| ! | CCATTGGCTAACCGTCAACC+TGG | + | chr2_4:57763078-57763097 | Msa0337670:CDS | 55.0% |
| AGGAGACAGCACAGGACGCA+AGG | + | chr2_4:57760325-57760344 | Msa0337670:five_prime_UTR | 60.0% | |
| AAGGAACGCAGCGCAGCCAT+GGG | + | chr2_4:57760344-57760363 | Msa0337670:exon | 60.0% | |
| CAACAGCCACCATGCTCAGG+AGG | + | chr2_4:57762537-57762556 | Msa0337670:CDS | 60.0% | |
| GCCCGATGGGGTGAATGCTA+AGG | + | chr2_4:57762806-57762825 | Msa0337670:CDS | 60.0% | |
| CAAGGAACGCAGCGCAGCCA+TGG | + | chr2_4:57760343-57760362 | Msa0337670:exon | 65.0% | |
| GGAGAGCCTCCTGAGCATGG+TGG | - | chr2_4:57762546-57762565 | None:intergenic | 65.0% | |
| GACGGAGAGCCTCCTGAGCA+TGG | - | chr2_4:57762549-57762568 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 57760176 | 57763552 | 57760176 | ID=Msa0337670;Name=Msa0337670 |
| chr2_4 | mRNA | 57760176 | 57763552 | 57760176 | ID=Msa0337670-mRNA-1;Parent=Msa0337670;Name=Msa0337670-mRNA-1;_AED=0.01;_eAED=0.01;_QI=186|1|1|1|1|1|4|415|223 |
| chr2_4 | exon | 57760176 | 57760371 | 57760176 | ID=Msa0337670-mRNA-1:exon:17603;Parent=Msa0337670-mRNA-1 |
| chr2_4 | exon | 57762119 | 57762620 | 57762119 | ID=Msa0337670-mRNA-1:exon:17604;Parent=Msa0337670-mRNA-1 |
| chr2_4 | exon | 57762746 | 57762827 | 57762746 | ID=Msa0337670-mRNA-1:exon:17605;Parent=Msa0337670-mRNA-1 |
| chr2_4 | exon | 57763060 | 57763552 | 57763060 | ID=Msa0337670-mRNA-1:exon:17606;Parent=Msa0337670-mRNA-1 |
| chr2_4 | five_prime_UTR | 57760176 | 57760361 | 57760176 | ID=Msa0337670-mRNA-1:five_prime_utr;Parent=Msa0337670-mRNA-1 |
| chr2_4 | CDS | 57760362 | 57760371 | 57760362 | ID=Msa0337670-mRNA-1:cds;Parent=Msa0337670-mRNA-1 |
| chr2_4 | CDS | 57762119 | 57762620 | 57762119 | ID=Msa0337670-mRNA-1:cds;Parent=Msa0337670-mRNA-1 |
| chr2_4 | CDS | 57762746 | 57762827 | 57762746 | ID=Msa0337670-mRNA-1:cds;Parent=Msa0337670-mRNA-1 |
| chr2_4 | CDS | 57763060 | 57763137 | 57763060 | ID=Msa0337670-mRNA-1:cds;Parent=Msa0337670-mRNA-1 |
| chr2_4 | three_prime_UTR | 57763138 | 57763552 | 57763138 | ID=Msa0337670-mRNA-1:three_prime_utr;Parent=Msa0337670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
