AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0123010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0123010 MtrunA17_Chr7g0261941 100.000 140 0 0 1 140 1 140 1.55e-99 281
Msa0123010 MtrunA17_Chr1g0183341 100.000 140 0 0 1 140 1 140 1.55e-99 281
Msa0123010 MtrunA17_Chr1g0157171 81.818 121 8 1 16 136 1 107 5.30e-65 194
Msa0123010 MtrunA17_Chr3g0079201 84.810 79 12 0 62 140 1 79 4.29e-44 139
Msa0123010 MtrunA17_Chr5g0422671 85.075 67 10 0 74 140 2 68 6.45e-37 120
Msa0123010 MtrunA17_Chr3g0092871 87.755 49 6 0 14 62 16 64 3.70e-24 88.6
Msa0123010 MtrunA17_Chr5g0422681 79.592 49 10 0 14 62 16 64 2.68e-20 79.0
Msa0123010 MtrunA17_Chr4g0015931 37.391 115 64 3 26 136 8 118 4.88e-16 69.3
Msa0123010 MtrunA17_CPg0492591 37.391 115 64 3 26 136 8 118 4.88e-16 69.3
Msa0123010 MtrunA17_Chr2g0322131 38.235 102 56 2 26 124 8 105 5.34e-15 67.0
Msa0123010 MtrunA17_Chr4g0017131 37.500 88 48 2 26 110 8 91 1.10e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0123010 AT2G33370.1 97.143 140 4 0 1 140 1 140 2.43e-97 276
Msa0123010 AT1G04480.1 97.143 140 4 0 1 140 1 140 2.43e-97 276
Msa0123010 AT3G04400.1 97.143 140 4 0 1 140 1 140 2.43e-97 276
Msa0123010 AT2G33370.2 98.400 125 2 0 16 140 1 125 1.23e-86 248
Msa0123010 AT3G04400.2 98.400 125 2 0 16 140 1 125 1.23e-86 248
Msa0123010 ATCG00780.1 34.783 115 67 3 26 136 8 118 1.26e-14 66.2

Find 65 sgRNAs with CRISPR-Local

Find 314 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATCCGTATTGACTTAATT+TGG 0.162112 1_3:+49912909 Msa0123010:three_prime_UTR
ACTTATGTTTAAGTATCTTT+TGG 0.240559 1_3:+49912770 Msa0123010:three_prime_UTR
GGATTTAGAAGATGATTAAT+TGG 0.294499 1_3:+49912810 Msa0123010:three_prime_UTR
CTAAGGAATGTGCTGATCTT+TGG 0.329007 1_3:+49912561 Msa0123010:CDS
ATATATGCAAAATGAAGATT+AGG 0.345485 1_3:-49910792 None:intergenic
TAAGTCAAGCAAAGACAAAA+TGG 0.371610 1_3:-49912752 None:intergenic
TATATGCAAAATGAAGATTA+GGG 0.389919 1_3:-49910791 None:intergenic
ATACCTTTCATTTCTCCCTT+AGG 0.394994 1_3:-49912213 None:intergenic
ACAAAATGGTGACAAAGTTT+AGG 0.399734 1_3:-49912738 None:intergenic
CCTACCCTTGATTCCCTTCA+CGG 0.405364 1_3:-49911069 None:intergenic
TCAGCACATTCCTTAGCAAT+TGG 0.405879 1_3:-49912554 None:intergenic
ACATGAAGACACCGTCCTTT+CGG 0.413999 1_3:-49911214 None:intergenic
TTAGAAGATGATTAATTGGT+TGG 0.414162 1_3:+49912814 Msa0123010:three_prime_UTR
AAAACCTTCTTCCTGAGATC+AGG 0.427356 1_3:-49911155 None:intergenic
CGTCTTCCTTCAGCTTGTGC+TGG 0.450748 1_3:+49911098 Msa0123010:CDS
TTAGGTCGTGGTGGTTCCGC+GGG 0.471837 1_3:+49910957 Msa0123010:intron
ATTGGCAATAAAATAATGTA+AGG 0.474592 1_3:+49910712 Msa0123010:five_prime_UTR
CATATCCGTGAAGGGAATCA+AGG 0.482700 1_3:+49911064 Msa0123010:CDS
TTCAGCTTGTGCTGGTGACA+TGG 0.489849 1_3:+49911106 Msa0123010:CDS
TTGGCAGCACTTGCAATCCT+AGG 0.493302 1_3:-49912584 None:intergenic
GGTGTCTTCATGTACTTTGA+AGG 0.499615 1_3:+49911224 Msa0123010:CDS
GAATCCAAATTAAGTCAATA+CGG 0.519085 1_3:-49912913 None:intergenic
CGCTGACGAACGATGACAGC+TGG 0.521156 1_3:-49911179 None:intergenic
AGAAGGGAAAGCCTGATCTC+AGG 0.525390 1_3:+49911144 Msa0123010:CDS
TTGGATATATGATATTTGGT+TGG 0.526269 1_3:+49912789 Msa0123010:three_prime_UTR
CAGTTCACCGTCGCCGCCAC+TGG 0.528733 1_3:-49911008 None:intergenic
TTGTGCTGGTGACATGGTGA+TGG 0.531038 1_3:+49911112 Msa0123010:CDS
AATGTGCTGATCTTTGGCCT+AGG 0.543147 1_3:+49912567 Msa0123010:CDS
ACACCGTCCTTTCGGCGCCA+TGG 0.546165 1_3:-49911206 None:intergenic
ATTGTAGGTTCTGCTATCAC+CGG 0.549900 1_3:+49912530 Msa0123010:intron
GGTGATGGCTACTGTGAAGA+AGG 0.561037 1_3:+49911127 Msa0123010:CDS
CAGAATCCACACTCATACAA+TGG 0.562785 1_3:-49912609 None:intergenic
ATTAGGTCGTGGTGGTTCCG+CGG 0.570592 1_3:+49910956 Msa0123010:intron
AAGCCATGGCGCCGAAAGGA+CGG 0.575094 1_3:+49911203 Msa0123010:CDS
AAAGCCTGATCTCAGGAAGA+AGG 0.579578 1_3:+49911151 Msa0123010:CDS
TGGTGTCATTGTGAATCCTA+AGG 0.581900 1_3:+49912197 Msa0123010:CDS
CCACACTCATACAATGGCAT+TGG 0.586391 1_3:-49912603 None:intergenic
TCTGTACATCATATCCGTGA+AGG 0.586813 1_3:+49911055 Msa0123010:CDS
AGGTCTACCAGTGGCGGCGA+CGG 0.589886 1_3:+49911001 Msa0123010:CDS
AACAAGTTCCGTATGTCACT+AGG 0.593234 1_3:+49910981 Msa0123010:CDS
ACATTCCTTAGCAATTGGAC+CGG 0.593816 1_3:-49912549 None:intergenic
ACTAAATACGACAATAGCAA+AGG 0.599490 1_3:-49912860 None:intergenic
AATCCTAAGGGAGAAATGAA+AGG 0.599885 1_3:+49912210 Msa0123010:CDS
TCGTTCGTCAGCGTAAGCCA+TGG 0.601755 1_3:+49911189 Msa0123010:CDS
CTGGTAGACCTAGTGACATA+CGG 0.602439 1_3:-49910989 None:intergenic
GCGTAAGCCATGGCGCCGAA+AGG 0.602704 1_3:+49911199 Msa0123010:CDS
AAATTAAAATTGCCACACAA+TGG 0.602941 1_3:-49912658 None:intergenic
TATCACCGGTCCAATTGCTA+AGG 0.605693 1_3:+49912544 Msa0123010:CDS
CGCAAGAGCAACTAGAGCGG+TGG 0.609423 1_3:+49910822 Msa0123010:five_prime_UTR
CTGTACATCATATCCGTGAA+GGG 0.613193 1_3:+49911056 Msa0123010:CDS
ATGTCACCAGCACAAGCTGA+AGG 0.618315 1_3:-49911104 None:intergenic
AACGAAACCATGTCGAAGAG+AGG 0.621677 1_3:+49910854 Msa0123010:exon
CCAATGCCATTGTATGAGTG+TGG 0.622710 1_3:+49912603 Msa0123010:exon
ATATCCGTGAAGGGAATCAA+GGG 0.625374 1_3:+49911065 Msa0123010:CDS
GTGAACTGTGCTGATAACAC+TGG 0.644053 1_3:+49911023 Msa0123010:CDS
GTACATACCTCTCTTCGACA+TGG 0.650721 1_3:-49910861 None:intergenic
CCGTGAAGGGAATCAAGGGT+AGG 0.651559 1_3:+49911069 Msa0123010:CDS
GGTGTCATTGTGAATCCTAA+GGG 0.659767 1_3:+49912198 Msa0123010:CDS
GTGATGGCTACTGTGAAGAA+GGG 0.669945 1_3:+49911128 Msa0123010:CDS
GTCACTAGGTCTACCAGTGG+CGG 0.692605 1_3:+49910995 Msa0123010:CDS
TAGGTCGTGGTGGTTCCGCG+GGG 0.708397 1_3:+49910958 Msa0123010:intron
AAACGCAAGAGCAACTAGAG+CGG 0.709688 1_3:+49910819 Msa0123010:five_prime_UTR
TATGTCACTAGGTCTACCAG+TGG 0.725438 1_3:+49910992 Msa0123010:CDS
GTAGTGCTGATGCCATTGTG+TGG 0.742959 1_3:+49912646 Msa0123010:three_prime_UTR
CATACGGAACTTGTTCCCCG+CGG 0.790506 1_3:-49910973 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAACATTTATTTACAAAATT+TGG + chr1_3:49911781-49911800 Msa0123010:intron 10.0%
!! AACATTTATTTACAAAATTT+GGG + chr1_3:49911782-49911801 Msa0123010:intron 10.0%
!! TAACATTTATTTACAAAATT+TGG + chr1_3:49911781-49911800 Msa0123010:intron 10.0%
!! AACATTTATTTACAAAATTT+GGG + chr1_3:49911782-49911801 Msa0123010:intron 10.0%
!!! TGTTGATTAAAATTGATTTA+GGG + chr1_3:49911451-49911470 Msa0123010:intron 15.0%
!!! TGTTTTTCTTGTTTAATTTA+CGG + chr1_3:49911523-49911542 Msa0123010:intron 15.0%
!!! TAGATTTCATTTTTAAACTA+GGG - chr1_3:49911645-49911664 None:intergenic 15.0%
!!! TTAGATTTCATTTTTAAACT+AGG - chr1_3:49911646-49911665 None:intergenic 15.0%
!! TTTAACAAAAATCAATTTCA+AGG - chr1_3:49911728-49911747 None:intergenic 15.0%
!!! AAACTTATCTTTATGTTTTT+AGG + chr1_3:49912692-49912711 Msa0123010:three_prime_UTR 15.0%
!!! TGTTGATTAAAATTGATTTA+GGG + chr1_3:49911451-49911470 Msa0123010:intron 15.0%
!!! TGTTTTTCTTGTTTAATTTA+CGG + chr1_3:49911523-49911542 Msa0123010:intron 15.0%
!!! TAGATTTCATTTTTAAACTA+GGG - chr1_3:49911645-49911664 None:intergenic 15.0%
!!! TTAGATTTCATTTTTAAACT+AGG - chr1_3:49911646-49911665 None:intergenic 15.0%
!! TTTAACAAAAATCAATTTCA+AGG - chr1_3:49911728-49911747 None:intergenic 15.0%
!!! AAACTTATCTTTATGTTTTT+AGG + chr1_3:49912692-49912711 Msa0123010:three_prime_UTR 15.0%
!! ATTGGCAATAAAATAATGTA+AGG + chr1_3:49910712-49910731 Msa0123010:five_prime_UTR 20.0%
!!! TTTCTATTGCTTATTTTCTT+GGG - chr1_3:49910738-49910757 None:intergenic 20.0%
!! TATATGCAAAATGAAGATTA+GGG - chr1_3:49910794-49910813 None:intergenic 20.0%
!! ATATATGCAAAATGAAGATT+AGG - chr1_3:49910795-49910814 None:intergenic 20.0%
!!! GTGTTGATTAAAATTGATTT+AGG + chr1_3:49911450-49911469 Msa0123010:intron 20.0%
!! AATCTTAAGTTATTTATGTC+TGG + chr1_3:49911757-49911776 Msa0123010:intron 20.0%
!!! TACACTTTTAGAATCAAATT+TGG + chr1_3:49911872-49911891 Msa0123010:intron 20.0%
!! ATATCAATTCAATCATTGTA+AGG + chr1_3:49912048-49912067 Msa0123010:intron 20.0%
!! AGTAAATCAATTAGACAAAA+CGG - chr1_3:49912467-49912486 None:intergenic 20.0%
!!! ACTTATGTTTAAGTATCTTT+TGG + chr1_3:49912770-49912789 Msa0123010:three_prime_UTR 20.0%
!!! TCTTTTGGATATATGATATT+TGG + chr1_3:49912785-49912804 Msa0123010:three_prime_UTR 20.0%
!! ATTGGCAATAAAATAATGTA+AGG + chr1_3:49910712-49910731 Msa0123010:five_prime_UTR 20.0%
!!! TTTCTATTGCTTATTTTCTT+GGG - chr1_3:49910738-49910757 None:intergenic 20.0%
!! TATATGCAAAATGAAGATTA+GGG - chr1_3:49910794-49910813 None:intergenic 20.0%
!! ATATATGCAAAATGAAGATT+AGG - chr1_3:49910795-49910814 None:intergenic 20.0%
!!! GTGTTGATTAAAATTGATTT+AGG + chr1_3:49911450-49911469 Msa0123010:intron 20.0%
!! AATCTTAAGTTATTTATGTC+TGG + chr1_3:49911757-49911776 Msa0123010:intron 20.0%
!!! TACACTTTTAGAATCAAATT+TGG + chr1_3:49911872-49911891 Msa0123010:intron 20.0%
!! ATATCAATTCAATCATTGTA+AGG + chr1_3:49912048-49912067 Msa0123010:intron 20.0%
!! AGTAAATCAATTAGACAAAA+CGG - chr1_3:49912467-49912486 None:intergenic 20.0%
!!! ACTTATGTTTAAGTATCTTT+TGG + chr1_3:49912770-49912789 Msa0123010:three_prime_UTR 20.0%
!!! TCTTTTGGATATATGATATT+TGG + chr1_3:49912785-49912804 Msa0123010:three_prime_UTR 20.0%
!!! CTTTCTATTGCTTATTTTCT+TGG - chr1_3:49910739-49910758 None:intergenic 25.0%
!!! TTCAGTTTTAGGGTTTATTT+GGG - chr1_3:49910767-49910786 None:intergenic 25.0%
!!! TTTCAGTTTTAGGGTTTATT+TGG - chr1_3:49910768-49910787 None:intergenic 25.0%
!!! TTAGGGTTTTTTCAGTTTTA+GGG - chr1_3:49910777-49910796 None:intergenic 25.0%
!!! ATTAGGGTTTTTTCAGTTTT+AGG - chr1_3:49910778-49910797 None:intergenic 25.0%
! AAGCAACATTTCAAAATCAA+AGG - chr1_3:49911280-49911299 None:intergenic 25.0%
!! CTATTTATTGGAAGTTTTTG+AGG + chr1_3:49911915-49911934 Msa0123010:intron 25.0%
! ACCAATACCAAATATTACAA+GGG - chr1_3:49912162-49912181 None:intergenic 25.0%
! AACCAATACCAAATATTACA+AGG - chr1_3:49912163-49912182 None:intergenic 25.0%
! AAATTAAAATTGCCACACAA+TGG - chr1_3:49912661-49912680 None:intergenic 25.0%
! TTGGATATATGATATTTGGT+TGG + chr1_3:49912789-49912808 Msa0123010:three_prime_UTR 25.0%
! GGATTTAGAAGATGATTAAT+TGG + chr1_3:49912810-49912829 Msa0123010:three_prime_UTR 25.0%
! TTAGAAGATGATTAATTGGT+TGG + chr1_3:49912814-49912833 Msa0123010:three_prime_UTR 25.0%
! GAATCCAAATTAAGTCAATA+CGG - chr1_3:49912916-49912935 None:intergenic 25.0%
!!! CTTTCTATTGCTTATTTTCT+TGG - chr1_3:49910739-49910758 None:intergenic 25.0%
!!! TTCAGTTTTAGGGTTTATTT+GGG - chr1_3:49910767-49910786 None:intergenic 25.0%
!!! TTTCAGTTTTAGGGTTTATT+TGG - chr1_3:49910768-49910787 None:intergenic 25.0%
!!! TTAGGGTTTTTTCAGTTTTA+GGG - chr1_3:49910777-49910796 None:intergenic 25.0%
!!! ATTAGGGTTTTTTCAGTTTT+AGG - chr1_3:49910778-49910797 None:intergenic 25.0%
! AAGCAACATTTCAAAATCAA+AGG - chr1_3:49911280-49911299 None:intergenic 25.0%
!! CTATTTATTGGAAGTTTTTG+AGG + chr1_3:49911915-49911934 Msa0123010:intron 25.0%
! ACCAATACCAAATATTACAA+GGG - chr1_3:49912162-49912181 None:intergenic 25.0%
! AACCAATACCAAATATTACA+AGG - chr1_3:49912163-49912182 None:intergenic 25.0%
! AAATTAAAATTGCCACACAA+TGG - chr1_3:49912661-49912680 None:intergenic 25.0%
! TTGGATATATGATATTTGGT+TGG + chr1_3:49912789-49912808 Msa0123010:three_prime_UTR 25.0%
! GGATTTAGAAGATGATTAAT+TGG + chr1_3:49912810-49912829 Msa0123010:three_prime_UTR 25.0%
! TTAGAAGATGATTAATTGGT+TGG + chr1_3:49912814-49912833 Msa0123010:three_prime_UTR 25.0%
! GAATCCAAATTAAGTCAATA+CGG - chr1_3:49912916-49912935 None:intergenic 25.0%
!!! TTTTAGGGTTTATTTGGGTT+GGG - chr1_3:49910762-49910781 None:intergenic 30.0%
ACAACAATTGAATCTGAGAA+AGG - chr1_3:49910900-49910919 None:intergenic 30.0%
! TGTATCCCTATTTTCTGATT+AGG + chr1_3:49910939-49910958 Msa0123010:intron 30.0%
CATTTCAAAATCAAAGGAAC+AGG - chr1_3:49911274-49911293 None:intergenic 30.0%
! TTCTGATTGGTCATTCATAT+TGG + chr1_3:49911327-49911346 Msa0123010:intron 30.0%
! TCTGATTGGTCATTCATATT+GGG + chr1_3:49911328-49911347 Msa0123010:intron 30.0%
! AAATTGATTTAGGGTGTGTT+TGG + chr1_3:49911460-49911479 Msa0123010:intron 30.0%
TTTCAAGGAATCAATTCACT+TGG - chr1_3:49911713-49911732 None:intergenic 30.0%
!!! TTTTAGAATCAAGAGCTTCA+AGG + chr1_3:49911817-49911836 Msa0123010:intron 30.0%
TGATGTACCCTTGTAATATT+TGG + chr1_3:49912152-49912171 Msa0123010:intron 30.0%
ACCCTTGTAATATTTGGTAT+TGG + chr1_3:49912158-49912177 Msa0123010:intron 30.0%
AACATATTTGCATGAGCAAT+AGG - chr1_3:49912289-49912308 None:intergenic 30.0%
TAGCAAACTAACAAAAAGAC+AGG - chr1_3:49912428-49912447 None:intergenic 30.0%
AATTAGACAAAACGGTACAA+AGG - chr1_3:49912459-49912478 None:intergenic 30.0%
! TTGTCTAATTGATTTACTGC+TGG + chr1_3:49912469-49912488 Msa0123010:intron 30.0%
ACAAAATGGTGACAAAGTTT+AGG - chr1_3:49912741-49912760 None:intergenic 30.0%
TAAGTCAAGCAAAGACAAAA+TGG - chr1_3:49912755-49912774 None:intergenic 30.0%
AAGGCAATGTTAAAAACACA+TGG - chr1_3:49912844-49912863 None:intergenic 30.0%
ACTAAATACGACAATAGCAA+AGG - chr1_3:49912863-49912882 None:intergenic 30.0%
!! TCATCCGTATTGACTTAATT+TGG + chr1_3:49912909-49912928 Msa0123010:three_prime_UTR 30.0%
!!! TTTTAGGGTTTATTTGGGTT+GGG - chr1_3:49910762-49910781 None:intergenic 30.0%
ACAACAATTGAATCTGAGAA+AGG - chr1_3:49910900-49910919 None:intergenic 30.0%
! TGTATCCCTATTTTCTGATT+AGG + chr1_3:49910939-49910958 Msa0123010:intron 30.0%
CATTTCAAAATCAAAGGAAC+AGG - chr1_3:49911274-49911293 None:intergenic 30.0%
! TTCTGATTGGTCATTCATAT+TGG + chr1_3:49911327-49911346 Msa0123010:intron 30.0%
! TCTGATTGGTCATTCATATT+GGG + chr1_3:49911328-49911347 Msa0123010:intron 30.0%
! AAATTGATTTAGGGTGTGTT+TGG + chr1_3:49911460-49911479 Msa0123010:intron 30.0%
TTTCAAGGAATCAATTCACT+TGG - chr1_3:49911713-49911732 None:intergenic 30.0%
!!! TTTTAGAATCAAGAGCTTCA+AGG + chr1_3:49911817-49911836 Msa0123010:intron 30.0%
TGATGTACCCTTGTAATATT+TGG + chr1_3:49912152-49912171 Msa0123010:intron 30.0%
ACCCTTGTAATATTTGGTAT+TGG + chr1_3:49912158-49912177 Msa0123010:intron 30.0%
AACATATTTGCATGAGCAAT+AGG - chr1_3:49912289-49912308 None:intergenic 30.0%
TAGCAAACTAACAAAAAGAC+AGG - chr1_3:49912428-49912447 None:intergenic 30.0%
AATTAGACAAAACGGTACAA+AGG - chr1_3:49912459-49912478 None:intergenic 30.0%
! TTGTCTAATTGATTTACTGC+TGG + chr1_3:49912469-49912488 Msa0123010:intron 30.0%
ACAAAATGGTGACAAAGTTT+AGG - chr1_3:49912741-49912760 None:intergenic 30.0%
TAAGTCAAGCAAAGACAAAA+TGG - chr1_3:49912755-49912774 None:intergenic 30.0%
AAGGCAATGTTAAAAACACA+TGG - chr1_3:49912844-49912863 None:intergenic 30.0%
ACTAAATACGACAATAGCAA+AGG - chr1_3:49912863-49912882 None:intergenic 30.0%
!! TCATCCGTATTGACTTAATT+TGG + chr1_3:49912909-49912928 Msa0123010:three_prime_UTR 30.0%
!!! GTTTTAGGGTTTATTTGGGT+TGG - chr1_3:49910763-49910782 None:intergenic 35.0%
CACGACCTAATCAGAAAATA+GGG - chr1_3:49910947-49910966 None:intergenic 35.0%
! CTGATTGGTCATTCATATTG+GGG + chr1_3:49911329-49911348 Msa0123010:intron 35.0%
!! ATCAATTCACTTGGTGTGTT+TGG - chr1_3:49911704-49911723 None:intergenic 35.0%
AGAATCAAATTTGGTTGCAG+TGG + chr1_3:49911881-49911900 Msa0123010:intron 35.0%
GAATCAAATTTGGTTGCAGT+GGG + chr1_3:49911882-49911901 Msa0123010:intron 35.0%
GGTAACTGGAAGCTATTTAT+TGG + chr1_3:49911903-49911922 Msa0123010:intron 35.0%
!! TTGGTTTTTGCAGATAATGC+TGG + chr1_3:49912177-49912196 Msa0123010:intron 35.0%
AATCCTAAGGGAGAAATGAA+AGG + chr1_3:49912210-49912229 Msa0123010:CDS 35.0%
ATACCTTTCATTTCTCCCTT+AGG - chr1_3:49912216-49912235 None:intergenic 35.0%
CACATTGTAACAAAGCCAAA+AGG - chr1_3:49912361-49912380 None:intergenic 35.0%
CAAACTAACAAAAAGACAGG+TGG - chr1_3:49912425-49912444 None:intergenic 35.0%
TATGTCATGCTGTTCATTGT+AGG + chr1_3:49912515-49912534 Msa0123010:intron 35.0%
!!! GTTTTAGGGTTTATTTGGGT+TGG - chr1_3:49910763-49910782 None:intergenic 35.0%
CACGACCTAATCAGAAAATA+GGG - chr1_3:49910947-49910966 None:intergenic 35.0%
! CTGATTGGTCATTCATATTG+GGG + chr1_3:49911329-49911348 Msa0123010:intron 35.0%
!! ATCAATTCACTTGGTGTGTT+TGG - chr1_3:49911704-49911723 None:intergenic 35.0%
AGAATCAAATTTGGTTGCAG+TGG + chr1_3:49911881-49911900 Msa0123010:intron 35.0%
GAATCAAATTTGGTTGCAGT+GGG + chr1_3:49911882-49911901 Msa0123010:intron 35.0%
GGTAACTGGAAGCTATTTAT+TGG + chr1_3:49911903-49911922 Msa0123010:intron 35.0%
!! TTGGTTTTTGCAGATAATGC+TGG + chr1_3:49912177-49912196 Msa0123010:intron 35.0%
AATCCTAAGGGAGAAATGAA+AGG + chr1_3:49912210-49912229 Msa0123010:CDS 35.0%
ATACCTTTCATTTCTCCCTT+AGG - chr1_3:49912216-49912235 None:intergenic 35.0%
CACATTGTAACAAAGCCAAA+AGG - chr1_3:49912361-49912380 None:intergenic 35.0%
CAAACTAACAAAAAGACAGG+TGG - chr1_3:49912425-49912444 None:intergenic 35.0%
TATGTCATGCTGTTCATTGT+AGG + chr1_3:49912515-49912534 Msa0123010:intron 35.0%
CCACGACCTAATCAGAAAAT+AGG - chr1_3:49910948-49910967 None:intergenic 40.0%
! CCTATTTTCTGATTAGGTCG+TGG + chr1_3:49910945-49910964 Msa0123010:intron 40.0%
! ATTTTCTGATTAGGTCGTGG+TGG + chr1_3:49910948-49910967 Msa0123010:intron 40.0%
AACAAGTTCCGTATGTCACT+AGG + chr1_3:49910981-49911000 Msa0123010:CDS 40.0%
TCTGTACATCATATCCGTGA+AGG + chr1_3:49911055-49911074 Msa0123010:CDS 40.0%
CTGTACATCATATCCGTGAA+GGG + chr1_3:49911056-49911075 Msa0123010:CDS 40.0%
ATATCCGTGAAGGGAATCAA+GGG + chr1_3:49911065-49911084 Msa0123010:CDS 40.0%
AAAACCTTCTTCCTGAGATC+AGG - chr1_3:49911158-49911177 None:intergenic 40.0%
GGTGTCTTCATGTACTTTGA+AGG + chr1_3:49911224-49911243 Msa0123010:CDS 40.0%
TGAGTGATCTGTGTTCTGAT+TGG + chr1_3:49911314-49911333 Msa0123010:intron 40.0%
! CACATCATGCTGTTTAAGAC+TGG - chr1_3:49911376-49911395 None:intergenic 40.0%
! TTTAGGGTGTGTTTGGATTG+AGG + chr1_3:49911467-49911486 Msa0123010:intron 40.0%
TTAGGGTGTGTTTGGATTGA+GGG + chr1_3:49911468-49911487 Msa0123010:intron 40.0%
TGTGTTTGGATTGAGGGTTT+AGG + chr1_3:49911474-49911493 Msa0123010:intron 40.0%
!! ATTCACTTGGTGTGTTTGGA+TGG - chr1_3:49911700-49911719 None:intergenic 40.0%
TCAAGGAGAATCAATTCGAG+TGG + chr1_3:49911834-49911853 Msa0123010:intron 40.0%
! TACAAGGGTACATCAGCATT+AGG - chr1_3:49912147-49912166 None:intergenic 40.0%
!! TGGTGTCATTGTGAATCCTA+AGG + chr1_3:49912197-49912216 Msa0123010:CDS 40.0%
!! GGTGTCATTGTGAATCCTAA+GGG + chr1_3:49912198-49912217 Msa0123010:CDS 40.0%
ATTGTAGGTTCTGCTATCAC+CGG + chr1_3:49912530-49912549 Msa0123010:intron 40.0%
ACATTCCTTAGCAATTGGAC+CGG - chr1_3:49912552-49912571 None:intergenic 40.0%
TCAGCACATTCCTTAGCAAT+TGG - chr1_3:49912557-49912576 None:intergenic 40.0%
! CTAAGGAATGTGCTGATCTT+TGG + chr1_3:49912561-49912580 Msa0123010:CDS 40.0%
CAGAATCCACACTCATACAA+TGG - chr1_3:49912612-49912631 None:intergenic 40.0%
CCACGACCTAATCAGAAAAT+AGG - chr1_3:49910948-49910967 None:intergenic 40.0%
! CCTATTTTCTGATTAGGTCG+TGG + chr1_3:49910945-49910964 Msa0123010:intron 40.0%
! ATTTTCTGATTAGGTCGTGG+TGG + chr1_3:49910948-49910967 Msa0123010:intron 40.0%
AACAAGTTCCGTATGTCACT+AGG + chr1_3:49910981-49911000 Msa0123010:CDS 40.0%
TCTGTACATCATATCCGTGA+AGG + chr1_3:49911055-49911074 Msa0123010:CDS 40.0%
CTGTACATCATATCCGTGAA+GGG + chr1_3:49911056-49911075 Msa0123010:CDS 40.0%
ATATCCGTGAAGGGAATCAA+GGG + chr1_3:49911065-49911084 Msa0123010:CDS 40.0%
AAAACCTTCTTCCTGAGATC+AGG - chr1_3:49911158-49911177 None:intergenic 40.0%
GGTGTCTTCATGTACTTTGA+AGG + chr1_3:49911224-49911243 Msa0123010:CDS 40.0%
TGAGTGATCTGTGTTCTGAT+TGG + chr1_3:49911314-49911333 Msa0123010:intron 40.0%
! CACATCATGCTGTTTAAGAC+TGG - chr1_3:49911376-49911395 None:intergenic 40.0%
! TTTAGGGTGTGTTTGGATTG+AGG + chr1_3:49911467-49911486 Msa0123010:intron 40.0%
TTAGGGTGTGTTTGGATTGA+GGG + chr1_3:49911468-49911487 Msa0123010:intron 40.0%
TGTGTTTGGATTGAGGGTTT+AGG + chr1_3:49911474-49911493 Msa0123010:intron 40.0%
!! ATTCACTTGGTGTGTTTGGA+TGG - chr1_3:49911700-49911719 None:intergenic 40.0%
TCAAGGAGAATCAATTCGAG+TGG + chr1_3:49911834-49911853 Msa0123010:intron 40.0%
! TACAAGGGTACATCAGCATT+AGG - chr1_3:49912147-49912166 None:intergenic 40.0%
!! TGGTGTCATTGTGAATCCTA+AGG + chr1_3:49912197-49912216 Msa0123010:CDS 40.0%
!! GGTGTCATTGTGAATCCTAA+GGG + chr1_3:49912198-49912217 Msa0123010:CDS 40.0%
ATTGTAGGTTCTGCTATCAC+CGG + chr1_3:49912530-49912549 Msa0123010:intron 40.0%
ACATTCCTTAGCAATTGGAC+CGG - chr1_3:49912552-49912571 None:intergenic 40.0%
TCAGCACATTCCTTAGCAAT+TGG - chr1_3:49912557-49912576 None:intergenic 40.0%
! CTAAGGAATGTGCTGATCTT+TGG + chr1_3:49912561-49912580 Msa0123010:CDS 40.0%
CAGAATCCACACTCATACAA+TGG - chr1_3:49912612-49912631 None:intergenic 40.0%
AAACGCAAGAGCAACTAGAG+CGG + chr1_3:49910819-49910838 Msa0123010:five_prime_UTR 45.0%
AACGAAACCATGTCGAAGAG+AGG + chr1_3:49910854-49910873 Msa0123010:exon 45.0%
GTACATACCTCTCTTCGACA+TGG - chr1_3:49910864-49910883 None:intergenic 45.0%
! TCGAAGAGAGGTATGTACAG+TGG + chr1_3:49910866-49910885 Msa0123010:intron 45.0%
CTGGTAGACCTAGTGACATA+CGG - chr1_3:49910992-49911011 None:intergenic 45.0%
TATGTCACTAGGTCTACCAG+TGG + chr1_3:49910992-49911011 Msa0123010:CDS 45.0%
! GTGAACTGTGCTGATAACAC+TGG + chr1_3:49911023-49911042 Msa0123010:CDS 45.0%
CATATCCGTGAAGGGAATCA+AGG + chr1_3:49911064-49911083 Msa0123010:CDS 45.0%
GTGATGGCTACTGTGAAGAA+GGG + chr1_3:49911128-49911147 Msa0123010:CDS 45.0%
AAAGCCTGATCTCAGGAAGA+AGG + chr1_3:49911151-49911170 Msa0123010:CDS 45.0%
ACATGAAGACACCGTCCTTT+CGG - chr1_3:49911217-49911236 None:intergenic 45.0%
AACGAGATTTACCAGCAGAC+AGG - chr1_3:49911420-49911439 None:intergenic 45.0%
GTTTGGATTGAGGGTTTAGG+AGG + chr1_3:49911477-49911496 Msa0123010:intron 45.0%
ATTGAGGGTTTAGGAGGAGA+AGG + chr1_3:49911483-49911502 Msa0123010:intron 45.0%
TTGAGGGTTTAGGAGGAGAA+GGG + chr1_3:49911484-49911503 Msa0123010:intron 45.0%
TTTGGATGGAGGGTTTAGGA+GGG - chr1_3:49911686-49911705 None:intergenic 45.0%
TGTGTTTGGATGGAGGGTTT+AGG - chr1_3:49911690-49911709 None:intergenic 45.0%
!! ACTTGGTGTGTTTGGATGGA+GGG - chr1_3:49911696-49911715 None:intergenic 45.0%
ATTTGGTTGCAGTGGGTAAC+TGG + chr1_3:49911889-49911908 Msa0123010:intron 45.0%
! TACACTTGCTCAGTGCCTTT+TGG + chr1_3:49912343-49912362 Msa0123010:intron 45.0%
CATGACATAGACGTCAAGAC+AGG - chr1_3:49912504-49912523 None:intergenic 45.0%
TATCACCGGTCCAATTGCTA+AGG + chr1_3:49912544-49912563 Msa0123010:CDS 45.0%
! AATGTGCTGATCTTTGGCCT+AGG + chr1_3:49912567-49912586 Msa0123010:CDS 45.0%
CCACACTCATACAATGGCAT+TGG - chr1_3:49912606-49912625 None:intergenic 45.0%
CCAATGCCATTGTATGAGTG+TGG + chr1_3:49912603-49912622 Msa0123010:exon 45.0%
AAACGCAAGAGCAACTAGAG+CGG + chr1_3:49910819-49910838 Msa0123010:five_prime_UTR 45.0%
AACGAAACCATGTCGAAGAG+AGG + chr1_3:49910854-49910873 Msa0123010:exon 45.0%
GTACATACCTCTCTTCGACA+TGG - chr1_3:49910864-49910883 None:intergenic 45.0%
! TCGAAGAGAGGTATGTACAG+TGG + chr1_3:49910866-49910885 Msa0123010:intron 45.0%
CTGGTAGACCTAGTGACATA+CGG - chr1_3:49910992-49911011 None:intergenic 45.0%
TATGTCACTAGGTCTACCAG+TGG + chr1_3:49910992-49911011 Msa0123010:CDS 45.0%
! GTGAACTGTGCTGATAACAC+TGG + chr1_3:49911023-49911042 Msa0123010:CDS 45.0%
CATATCCGTGAAGGGAATCA+AGG + chr1_3:49911064-49911083 Msa0123010:CDS 45.0%
GTGATGGCTACTGTGAAGAA+GGG + chr1_3:49911128-49911147 Msa0123010:CDS 45.0%
AAAGCCTGATCTCAGGAAGA+AGG + chr1_3:49911151-49911170 Msa0123010:CDS 45.0%
ACATGAAGACACCGTCCTTT+CGG - chr1_3:49911217-49911236 None:intergenic 45.0%
AACGAGATTTACCAGCAGAC+AGG - chr1_3:49911420-49911439 None:intergenic 45.0%
GTTTGGATTGAGGGTTTAGG+AGG + chr1_3:49911477-49911496 Msa0123010:intron 45.0%
ATTGAGGGTTTAGGAGGAGA+AGG + chr1_3:49911483-49911502 Msa0123010:intron 45.0%
TTGAGGGTTTAGGAGGAGAA+GGG + chr1_3:49911484-49911503 Msa0123010:intron 45.0%
TTTGGATGGAGGGTTTAGGA+GGG - chr1_3:49911686-49911705 None:intergenic 45.0%
TGTGTTTGGATGGAGGGTTT+AGG - chr1_3:49911690-49911709 None:intergenic 45.0%
!! ACTTGGTGTGTTTGGATGGA+GGG - chr1_3:49911696-49911715 None:intergenic 45.0%
ATTTGGTTGCAGTGGGTAAC+TGG + chr1_3:49911889-49911908 Msa0123010:intron 45.0%
! TACACTTGCTCAGTGCCTTT+TGG + chr1_3:49912343-49912362 Msa0123010:intron 45.0%
CATGACATAGACGTCAAGAC+AGG - chr1_3:49912504-49912523 None:intergenic 45.0%
TATCACCGGTCCAATTGCTA+AGG + chr1_3:49912544-49912563 Msa0123010:CDS 45.0%
! AATGTGCTGATCTTTGGCCT+AGG + chr1_3:49912567-49912586 Msa0123010:CDS 45.0%
CCACACTCATACAATGGCAT+TGG - chr1_3:49912606-49912625 None:intergenic 45.0%
CCAATGCCATTGTATGAGTG+TGG + chr1_3:49912603-49912622 Msa0123010:exon 45.0%
CCTACCCTTGATTCCCTTCA+CGG - chr1_3:49911072-49911091 None:intergenic 50.0%
ATGTCACCAGCACAAGCTGA+AGG - chr1_3:49911107-49911126 None:intergenic 50.0%
! TTCAGCTTGTGCTGGTGACA+TGG + chr1_3:49911106-49911125 Msa0123010:CDS 50.0%
! TTGTGCTGGTGACATGGTGA+TGG + chr1_3:49911112-49911131 Msa0123010:CDS 50.0%
! GGTGATGGCTACTGTGAAGA+AGG + chr1_3:49911127-49911146 Msa0123010:CDS 50.0%
AGAAGGGAAAGCCTGATCTC+AGG + chr1_3:49911144-49911163 Msa0123010:CDS 50.0%
TCATTGTGCTACCTGTCTGC+TGG + chr1_3:49911406-49911425 Msa0123010:intron 50.0%
GGTTTAGGAGGAGAAGGGAA+GGG + chr1_3:49911489-49911508 Msa0123010:intron 50.0%
TTGGATGGAGGGTTTAGGAG+GGG - chr1_3:49911685-49911704 None:intergenic 50.0%
GTTTGGATGGAGGGTTTAGG+AGG - chr1_3:49911687-49911706 None:intergenic 50.0%
!! CACTTGGTGTGTTTGGATGG+AGG - chr1_3:49911697-49911716 None:intergenic 50.0%
TTGGCAGCACTTGCAATCCT+AGG - chr1_3:49912587-49912606 None:intergenic 50.0%
!! GTAGTGCTGATGCCATTGTG+TGG + chr1_3:49912646-49912665 Msa0123010:three_prime_UTR 50.0%
CCTACCCTTGATTCCCTTCA+CGG - chr1_3:49911072-49911091 None:intergenic 50.0%
ATGTCACCAGCACAAGCTGA+AGG - chr1_3:49911107-49911126 None:intergenic 50.0%
! TTCAGCTTGTGCTGGTGACA+TGG + chr1_3:49911106-49911125 Msa0123010:CDS 50.0%
! TTGTGCTGGTGACATGGTGA+TGG + chr1_3:49911112-49911131 Msa0123010:CDS 50.0%
! GGTGATGGCTACTGTGAAGA+AGG + chr1_3:49911127-49911146 Msa0123010:CDS 50.0%
AGAAGGGAAAGCCTGATCTC+AGG + chr1_3:49911144-49911163 Msa0123010:CDS 50.0%
TCATTGTGCTACCTGTCTGC+TGG + chr1_3:49911406-49911425 Msa0123010:intron 50.0%
GGTTTAGGAGGAGAAGGGAA+GGG + chr1_3:49911489-49911508 Msa0123010:intron 50.0%
TTGGATGGAGGGTTTAGGAG+GGG - chr1_3:49911685-49911704 None:intergenic 50.0%
GTTTGGATGGAGGGTTTAGG+AGG - chr1_3:49911687-49911706 None:intergenic 50.0%
!! CACTTGGTGTGTTTGGATGG+AGG - chr1_3:49911697-49911716 None:intergenic 50.0%
TTGGCAGCACTTGCAATCCT+AGG - chr1_3:49912587-49912606 None:intergenic 50.0%
!! GTAGTGCTGATGCCATTGTG+TGG + chr1_3:49912646-49912665 Msa0123010:three_prime_UTR 50.0%
ATTAGGTCGTGGTGGTTCCG+CGG + chr1_3:49910956-49910975 Msa0123010:intron 55.0%
! CATACGGAACTTGTTCCCCG+CGG - chr1_3:49910976-49910995 None:intergenic 55.0%
GTCACTAGGTCTACCAGTGG+CGG + chr1_3:49910995-49911014 Msa0123010:CDS 55.0%
CCGTGAAGGGAATCAAGGGT+AGG + chr1_3:49911069-49911088 Msa0123010:CDS 55.0%
CGTCTTCCTTCAGCTTGTGC+TGG + chr1_3:49911098-49911117 Msa0123010:CDS 55.0%
TCGTTCGTCAGCGTAAGCCA+TGG + chr1_3:49911189-49911208 Msa0123010:CDS 55.0%
GGGTTTAGGAGGAGAAGGGA+AGG + chr1_3:49911488-49911507 Msa0123010:intron 55.0%
TTAGGAGGAGAAGGGAAGGG+AGG + chr1_3:49911492-49911511 Msa0123010:intron 55.0%
TAGGAGGAGAAGGGAAGGGA+GGG + chr1_3:49911493-49911512 Msa0123010:intron 55.0%
TGGAGGGTTTAGGAGGGGAA+GGG - chr1_3:49911680-49911699 None:intergenic 55.0%
ATGGAGGGTTTAGGAGGGGA+AGG - chr1_3:49911681-49911700 None:intergenic 55.0%
ATTAGGTCGTGGTGGTTCCG+CGG + chr1_3:49910956-49910975 Msa0123010:intron 55.0%
! CATACGGAACTTGTTCCCCG+CGG - chr1_3:49910976-49910995 None:intergenic 55.0%
GTCACTAGGTCTACCAGTGG+CGG + chr1_3:49910995-49911014 Msa0123010:CDS 55.0%
CCGTGAAGGGAATCAAGGGT+AGG + chr1_3:49911069-49911088 Msa0123010:CDS 55.0%
CGTCTTCCTTCAGCTTGTGC+TGG + chr1_3:49911098-49911117 Msa0123010:CDS 55.0%
TCGTTCGTCAGCGTAAGCCA+TGG + chr1_3:49911189-49911208 Msa0123010:CDS 55.0%
GGGTTTAGGAGGAGAAGGGA+AGG + chr1_3:49911488-49911507 Msa0123010:intron 55.0%
TTAGGAGGAGAAGGGAAGGG+AGG + chr1_3:49911492-49911511 Msa0123010:intron 55.0%
TAGGAGGAGAAGGGAAGGGA+GGG + chr1_3:49911493-49911512 Msa0123010:intron 55.0%
TGGAGGGTTTAGGAGGGGAA+GGG - chr1_3:49911680-49911699 None:intergenic 55.0%
ATGGAGGGTTTAGGAGGGGA+AGG - chr1_3:49911681-49911700 None:intergenic 55.0%
CGCAAGAGCAACTAGAGCGG+TGG + chr1_3:49910822-49910841 Msa0123010:five_prime_UTR 60.0%
TTAGGTCGTGGTGGTTCCGC+GGG + chr1_3:49910957-49910976 Msa0123010:intron 60.0%
CGCTGACGAACGATGACAGC+TGG - chr1_3:49911182-49911201 None:intergenic 60.0%
! AAGCCATGGCGCCGAAAGGA+CGG + chr1_3:49911203-49911222 Msa0123010:CDS 60.0%
AGGAGGAGAAGGGAAGGGAG+GGG + chr1_3:49911494-49911513 Msa0123010:intron 60.0%
GTTTAGGAGGGGAAGGGAGG+GGG - chr1_3:49911674-49911693 None:intergenic 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG - chr1_3:49911675-49911694 None:intergenic 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG - chr1_3:49911676-49911695 None:intergenic 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG - chr1_3:49911677-49911696 None:intergenic 60.0%
CGCAAGAGCAACTAGAGCGG+TGG + chr1_3:49910822-49910841 Msa0123010:five_prime_UTR 60.0%
TTAGGTCGTGGTGGTTCCGC+GGG + chr1_3:49910957-49910976 Msa0123010:intron 60.0%
CGCTGACGAACGATGACAGC+TGG - chr1_3:49911182-49911201 None:intergenic 60.0%
! AAGCCATGGCGCCGAAAGGA+CGG + chr1_3:49911203-49911222 Msa0123010:CDS 60.0%
AGGAGGAGAAGGGAAGGGAG+GGG + chr1_3:49911494-49911513 Msa0123010:intron 60.0%
GTTTAGGAGGGGAAGGGAGG+GGG - chr1_3:49911674-49911693 None:intergenic 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG - chr1_3:49911675-49911694 None:intergenic 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG - chr1_3:49911676-49911695 None:intergenic 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG - chr1_3:49911677-49911696 None:intergenic 60.0%
TAGGTCGTGGTGGTTCCGCG+GGG + chr1_3:49910958-49910977 Msa0123010:intron 65.0%
AGGTCTACCAGTGGCGGCGA+CGG + chr1_3:49911001-49911020 Msa0123010:CDS 65.0%
! GCGTAAGCCATGGCGCCGAA+AGG + chr1_3:49911199-49911218 Msa0123010:CDS 65.0%
ACACCGTCCTTTCGGCGCCA+TGG - chr1_3:49911209-49911228 None:intergenic 65.0%
AGGAGAAGGGAAGGGAGGGG+AGG + chr1_3:49911497-49911516 Msa0123010:intron 65.0%
GGAGAAGGGAAGGGAGGGGA+GGG + chr1_3:49911498-49911517 Msa0123010:intron 65.0%
TAGGTCGTGGTGGTTCCGCG+GGG + chr1_3:49910958-49910977 Msa0123010:intron 65.0%
AGGTCTACCAGTGGCGGCGA+CGG + chr1_3:49911001-49911020 Msa0123010:CDS 65.0%
! GCGTAAGCCATGGCGCCGAA+AGG + chr1_3:49911199-49911218 Msa0123010:CDS 65.0%
ACACCGTCCTTTCGGCGCCA+TGG - chr1_3:49911209-49911228 None:intergenic 65.0%
AGGAGAAGGGAAGGGAGGGG+AGG + chr1_3:49911497-49911516 Msa0123010:intron 65.0%
GGAGAAGGGAAGGGAGGGGA+GGG + chr1_3:49911498-49911517 Msa0123010:intron 65.0%
CAGTTCACCGTCGCCGCCAC+TGG - chr1_3:49911011-49911030 None:intergenic 70.0%
AGGAGGGGAAGGGAGGGGGA+GGG - chr1_3:49911670-49911689 None:intergenic 70.0%
TAGGAGGGGAAGGGAGGGGG+AGG - chr1_3:49911671-49911690 None:intergenic 70.0%
CAGTTCACCGTCGCCGCCAC+TGG - chr1_3:49911011-49911030 None:intergenic 70.0%
AGGAGGGGAAGGGAGGGGGA+GGG - chr1_3:49911670-49911689 None:intergenic 70.0%
TAGGAGGGGAAGGGAGGGGG+AGG - chr1_3:49911671-49911690 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 49910707 49912942 49910707 ID=Msa0123010;Name=Msa0123010
chr1_3 mRNA 49910707 49912942 49910707 ID=Msa0123010-mRNA-1;Parent=Msa0123010;Name=Msa0123010-mRNA-1;_AED=0.00;_eAED=0.00;_QI=156|1|1|1|1|1|4|323|140
chr1_3 exon 49910707 49910875 49910707 ID=Msa0123010-mRNA-1:exon:15204;Parent=Msa0123010-mRNA-1
chr1_3 exon 49910961 49911245 49910961 ID=Msa0123010-mRNA-1:exon:15205;Parent=Msa0123010-mRNA-1
chr1_3 exon 49912190 49912231 49912190 ID=Msa0123010-mRNA-1:exon:15206;Parent=Msa0123010-mRNA-1
chr1_3 exon 49912537 49912942 49912537 ID=Msa0123010-mRNA-1:exon:15207;Parent=Msa0123010-mRNA-1
chr1_3 five_prime_UTR 49910707 49910862 49910707 ID=Msa0123010-mRNA-1:five_prime_utr;Parent=Msa0123010-mRNA-1
chr1_3 CDS 49910863 49910875 49910863 ID=Msa0123010-mRNA-1:cds;Parent=Msa0123010-mRNA-1
chr1_3 CDS 49910961 49911245 49910961 ID=Msa0123010-mRNA-1:cds;Parent=Msa0123010-mRNA-1
chr1_3 CDS 49912190 49912231 49912190 ID=Msa0123010-mRNA-1:cds;Parent=Msa0123010-mRNA-1
chr1_3 CDS 49912537 49912619 49912537 ID=Msa0123010-mRNA-1:cds;Parent=Msa0123010-mRNA-1
chr1_3 three_prime_UTR 49912620 49912942 49912620 ID=Msa0123010-mRNA-1:three_prime_utr;Parent=Msa0123010-mRNA-1
Gene Sequence

>Msa0123010

ATGTCGAAGAGAGGTCGTGGTGGTTCCGCGGGGAACAAGTTCCGTATGTCACTAGGTCTACCAGTGGCGGCGACGGTGAACTGTGCTGATAACACTGGAGCAAAGAATCTGTACATCATATCCGTGAAGGGAATCAAGGGTAGGTTGAATCGTCTTCCTTCAGCTTGTGCTGGTGACATGGTGATGGCTACTGTGAAGAAGGGAAAGCCTGATCTCAGGAAGAAGGTTTTGCCAGCTGTCATCGTTCGTCAGCGTAAGCCATGGCGCCGAAAGGACGGTGTCTTCATGTACTTTGAAGATAATGCTGGTGTCATTGTGAATCCTAAGGGAGAAATGAAAGGTTCTGCTATCACCGGTCCAATTGCTAAGGAATGTGCTGATCTTTGGCCTAGGATTGCAAGTGCTGCCAATGCCATTGTATGA
Protein sequence

>Msa0123010

MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIAKECADLWPRIASAANAIV*