AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0619860


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0619860 MtrunA17_Chr8g0385771 99.171 603 5 0 1 603 1 603 0.0 1238
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0619860 AT5G61970.1 74.917 602 144 3 1 599 1 598 0.0 950

Find 166 sgRNAs with CRISPR-Local

Find 507 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAACCAGTGATTGAGAATT+TGG 0.115111 4_2:+71196569 None:intergenic
TCATAATCAATGTTCAAAAT+TGG 0.161311 4_2:+71189633 None:intergenic
TTGAATTATTGAAGACTTAA+TGG 0.166875 4_2:-71196661 Msa0619860:intron
AGCTAACTTCTTCTGGCTTT+TGG 0.191919 4_2:+71191757 None:intergenic
GGCTTTATAAGCAGAATATT+TGG 0.214752 4_2:-71189874 Msa0619860:CDS
TCAAATTCCGCTGCGATTTC+CGG 0.226121 4_2:+71196912 None:intergenic
TTGAGTTGCCTAGAGATATT+TGG 0.228836 4_2:-71189750 Msa0619860:three_prime_UTR
CCTCTAGTTTAGCTTTAAAA+AGG 0.275792 4_2:+71193801 None:intergenic
CAAAATGGCAACCCTTGTTT+TGG 0.275936 4_2:+71193534 None:intergenic
TGATCAGAATTGGTTGATTT+CGG 0.285982 4_2:+71196600 None:intergenic
TCAGCAAAGCTAACTTCTTC+TGG 0.288214 4_2:+71191750 None:intergenic
TCTTCATGTGATTCTCTATT+CGG 0.294404 4_2:-71195009 Msa0619860:CDS
CTATCTGATTTAGTCAGTTC+TGG 0.303730 4_2:-71191786 Msa0619860:CDS
AGATACTGCCTTCACAAAAT+TGG 0.305322 4_2:-71193887 Msa0619860:CDS
AGCATATTTGATTCAGTGTT+TGG 0.315353 4_2:-71189848 Msa0619860:three_prime_UTR
GGCAGATTCTAGGACATCTT+TGG 0.324881 4_2:-71194847 Msa0619860:CDS
TGAATTATTGAAGACTTAAT+GGG 0.325650 4_2:-71196660 Msa0619860:intron
TACGAGGAGTTAGGGAAATA+TGG 0.327193 4_2:-71193968 Msa0619860:CDS
CTTCCATGACAGAATTTCAT+TGG 0.334299 4_2:-71193585 Msa0619860:CDS
GTGCGGTCAAGGCAGATTCT+AGG 0.336790 4_2:-71194857 Msa0619860:CDS
GTTAGGGAAATATGGAGATT+TGG 0.338508 4_2:-71193960 Msa0619860:CDS
CATAATCAATGTTCAAAATT+GGG 0.338972 4_2:+71189634 None:intergenic
CGGGCAATTGCCTGGAAAGC+TGG 0.340905 4_2:+71189985 None:intergenic
GGATATCTTTCTCCAGCTCC+TGG 0.341220 4_2:+71192371 None:intergenic
ACTACTAAACATTGGCGATA+TGG 0.346999 4_2:-71193840 Msa0619860:CDS
CATTTGATATTGGAAATCTA+TGG 0.352525 4_2:+71193557 None:intergenic
AGGCTGTATTCGGGCTGATT+TGG 0.353297 4_2:-71192266 Msa0619860:intron
AATTCCCAGATATTCAAAAT+AGG 0.359611 4_2:-71189924 Msa0619860:CDS
AAGATACCAACCTTTCAAAA+TGG 0.363789 4_2:+71193519 None:intergenic
TATAAGCGAACAAGCTCTTC+AGG 0.367288 4_2:+71191978 None:intergenic
ATGATGCTAGAGGCTGTATT+CGG 0.368177 4_2:-71192276 Msa0619860:CDS
AAAACTACAAAGGCAACTAT+TGG 0.368252 4_2:+71189581 None:intergenic
AAACAAATTGCATCGGAATC+AGG 0.368525 4_2:-71196968 Msa0619860:five_prime_UTR
AGGGCTGTATACGAGGAGTT+AGG 0.371688 4_2:-71193977 Msa0619860:CDS
GGAAAGCTTCAAATGTTAGA+TGG 0.373121 4_2:-71190971 Msa0619860:CDS
AAGGCTGTCAGTGCTGTCTT+AGG 0.375481 4_2:-71192095 Msa0619860:CDS
GGGAACAATCTGATCAGAAT+TGG 0.378268 4_2:+71196590 None:intergenic
GTCCAGCACAATCGGGTTAC+GGG 0.380969 4_2:+71189966 None:intergenic
TGAGATGCATTTGGTCCATT+TGG 0.384327 4_2:+71194945 None:intergenic
GGGCAATTGCCTGGAAAGCT+GGG 0.390320 4_2:+71189986 None:intergenic
AAACATCAAGTTTCTCCAAT+AGG 0.391438 4_2:+71190067 None:intergenic
AGCTCCGGTCAATGATATAT+TGG 0.393649 4_2:+71190257 None:intergenic
TACGCAAGGTCCAGCACAAT+CGG 0.400545 4_2:+71189958 None:intergenic
TCAGTTGGAGAAATTCCTAT+TGG 0.402440 4_2:-71190082 Msa0619860:intron
ATTTATACAACCTCCTCAAT+CGG 0.402621 4_2:+71196205 None:intergenic
CTTATATGATCTCTTGCTAC+AGG 0.403111 4_2:-71191961 Msa0619860:intron
GACTATGGTGAAAGAATTAG+AGG 0.405813 4_2:-71190376 Msa0619860:CDS
TGTTTGAGCAAGATCAGAAC+TGG 0.406278 4_2:-71194263 Msa0619860:CDS
CAACAAAAGGTTGCGCTCAA+TGG 0.416938 4_2:+71192064 None:intergenic
AGAGTGTTCATGCAAAAGTT+TGG 0.418884 4_2:-71191727 Msa0619860:CDS
GCGAACAAGCTCTTCAGGTT+TGG 0.420651 4_2:+71191983 None:intergenic
ATGACAGAATTTCATTGGCT+TGG 0.420947 4_2:-71193580 Msa0619860:CDS
GGTCCAGCACAATCGGGTTA+CGG 0.428004 4_2:+71189965 None:intergenic
TAGATTCGTTGAGATGCATT+TGG 0.428149 4_2:+71194936 None:intergenic
CAACAAACTCCCCTTCATAT+AGG 0.430300 4_2:+71194284 None:intergenic
AAACCAGTGATTGAGAATTT+GGG 0.431036 4_2:+71196570 None:intergenic
TCGGGTTACGGGCAATTGCC+TGG 0.434213 4_2:+71189977 None:intergenic
AGTTGTATAGAACATGCATT+GGG 0.445865 4_2:-71190327 Msa0619860:CDS
AGAACATGCATTGGGGATCA+TGG 0.454533 4_2:-71190319 Msa0619860:CDS
GTTCCCAAATTCTCAATCAC+TGG 0.456061 4_2:-71196573 Msa0619860:intron
TGATGCTAGAGGCTGTATTC+GGG 0.459700 4_2:-71192275 Msa0619860:CDS
TGAAGGCAGTATCTGATACT+AGG 0.459854 4_2:+71193896 None:intergenic
TCTATTCGGCGGAGAGAGCT+TGG 0.459965 4_2:-71194995 Msa0619860:CDS
AGTGACATTAGACTCAGTTA+AGG 0.466330 4_2:+71196140 None:intergenic
ATCATTGACCGGAGCTGAGC+GGG 0.467588 4_2:-71190250 Msa0619860:intron
CCCGCTCACGACACAAAACT+TGG 0.470661 4_2:+71193933 None:intergenic
AATGTTAGATGGCAATAGTA+AGG 0.476979 4_2:-71190960 Msa0619860:intron
TTGCAACCCTGACCAACAAA+AGG 0.482338 4_2:+71192051 None:intergenic
CAGAGGCTTGTAGATTTGAC+TGG 0.485146 4_2:+71193864 None:intergenic
GTAAATTTCCAAATATCTCT+AGG 0.485327 4_2:+71189742 None:intergenic
AACAAAGGAACCTGCGTCAT+CGG 0.491021 4_2:+71189799 None:intergenic
GAAAGATATCCATGGTCCCT+TGG 0.491522 4_2:-71192359 Msa0619860:CDS
GAGAAAAGGCAGCTTCCAAA+TGG 0.491978 4_2:-71194960 Msa0619860:CDS
GGGCTGTATACGAGGAGTTA+GGG 0.493311 4_2:-71193976 Msa0619860:CDS
TCTCAACGAATCTATCTGAT+TGG 0.494018 4_2:-71194927 Msa0619860:CDS
TGCCCGTAACCCGATTGTGC+TGG 0.494225 4_2:-71189968 Msa0619860:CDS
AGTCTAATGTCACTGAAGTA+AGG 0.494583 4_2:-71196131 Msa0619860:intron
GGCTTACGAGTCCTATATGA+AGG 0.496687 4_2:-71194295 Msa0619860:CDS
AGTTTAGCTGAAGATGCCTT+AGG 0.498692 4_2:-71190992 Msa0619860:CDS
GGAGTCATGCCATGGAGAAA+AGG 0.500377 4_2:-71194974 Msa0619860:CDS
CAATATCAAATGCCAAAACA+AGG 0.504437 4_2:-71193546 Msa0619860:CDS
TCGTATACTTGCCACGACCG+TGG 0.504552 4_2:+71196169 None:intergenic
TTGAGATCTTGCCTCAGCCA+TGG 0.506412 4_2:+71193615 None:intergenic
TATTTCAGCGGACAAAAGAC+TGG 0.510192 4_2:-71192329 Msa0619860:CDS
ACTTTCTGCATTTCCTGCAG+TGG 0.513474 4_2:+71192145 None:intergenic
CATACAGTGTGGCTGGAAAG+AGG 0.514081 4_2:-71191048 Msa0619860:CDS
ATTATGTACCCGCTCAGCTC+CGG 0.514586 4_2:+71190242 None:intergenic
TGATTTGAATGGTCTTGATA+AGG 0.515403 4_2:-71192114 Msa0619860:CDS
TTGAAGTTTACCCACGGTCG+TGG 0.516226 4_2:-71196180 Msa0619860:CDS
TTTATACAACCTCCTCAATC+GGG 0.522055 4_2:+71196206 None:intergenic
CGTATACTTGCCACGACCGT+GGG 0.522528 4_2:+71196170 None:intergenic
GATATCTTTCTCCAGCTCCT+GGG 0.522684 4_2:+71192372 None:intergenic
TAAAGCACTTCAAAAGTGCT+AGG 0.524363 4_2:-71194230 Msa0619860:intron
TCACCGATTTCGATCCGAGT+TGG 0.526538 4_2:+71189514 None:intergenic
TGATGTTTATGAGTCTGCTG+TGG 0.529265 4_2:-71190052 Msa0619860:CDS
GTGTTTGTACCAGGCTGCCA+TGG 0.530914 4_2:-71193632 Msa0619860:intron
TAACATTTGAAGCTTTCCTA+AGG 0.531683 4_2:+71190976 None:intergenic
GGTATTGTACAGCCCGATTG+AGG 0.540160 4_2:-71196218 Msa0619860:CDS
ATCTCCAATATATCATTGAC+CGG 0.542724 4_2:-71190261 Msa0619860:CDS
CTGATTTAGTCAGTTCTGGA+AGG 0.544771 4_2:-71191782 Msa0619860:CDS
TGATATATTGGAGATCCCTT+CGG 0.546542 4_2:+71190269 None:intergenic
TGATTTAGTCAGTTCTGGAA+GGG 0.550208 4_2:-71191781 Msa0619860:CDS
GCAAAGTCATACAGTGTGGC+TGG 0.551315 4_2:-71191055 Msa0619860:CDS
GATGTTTATGAGTCTGCTGT+GGG 0.553817 4_2:-71190051 Msa0619860:CDS
TATTCAAAATAGGATGAAGA+AGG 0.553984 4_2:-71189914 Msa0619860:CDS
AGAGAATCAATCATCTGCCA+TGG 0.554301 4_2:-71196634 Msa0619860:CDS
ACGCAAGGTCCAGCACAATC+GGG 0.554921 4_2:+71189959 None:intergenic
TTTGTGTCGTGAGCGGGTTG+AGG 0.555876 4_2:-71193927 Msa0619860:CDS
GTACCAGGCTGCCATGGCTG+AGG 0.557385 4_2:-71193626 Msa0619860:intron
GCAATTGCCTGGAAAGCTGG+GGG 0.559921 4_2:+71189988 None:intergenic
ATCAGGACACAACTCGGAGT+CGG 0.561098 4_2:-71196951 Msa0619860:five_prime_UTR
GCCAATGTTTAGTAGTTCAG+AGG 0.565196 4_2:+71193847 None:intergenic
AAGAAGGACAAAAGAGCAAA+GGG 0.565383 4_2:-71189898 Msa0619860:CDS
AACCCTAAAACAAATTGCAT+CGG 0.567650 4_2:-71196975 None:intergenic
ATACAGTGTGGCTGGAAAGA+GGG 0.567964 4_2:-71191047 Msa0619860:CDS
GGCAATTGCCTGGAAAGCTG+GGG 0.568944 4_2:+71189987 None:intergenic
CAGTTGTATAGAACATGCAT+TGG 0.572812 4_2:-71190328 Msa0619860:CDS
ATAATCAATGTTCAAAATTG+GGG 0.574485 4_2:+71189635 None:intergenic
GTTCTATACAACTGTTAGAA+CGG 0.575188 4_2:+71190337 None:intergenic
TGGGGATCATGGAGGAGAAG+AGG 0.577029 4_2:-71190308 Msa0619860:CDS
GAATACAGCCTCTAGCATCA+TGG 0.586389 4_2:+71192278 None:intergenic
TCTGCATACCATGATGCTAG+AGG 0.587070 4_2:-71192286 Msa0619860:CDS
TAGGACATCTTTGGAAGCTG+AGG 0.588289 4_2:-71194838 Msa0619860:intron
TTTCGGATCATCGACTTCCA+TGG 0.588879 4_2:+71196617 None:intergenic
GCAAGATCAGAACTGGGATG+TGG 0.590766 4_2:-71194256 Msa0619860:CDS
ATGCAGCATGGTTTGCGTCA+CGG 0.594530 4_2:-71196396 Msa0619860:CDS
GAGAGCTTGGAGTCATGCCA+TGG 0.598852 4_2:-71194982 Msa0619860:CDS
CTAAACATTGGCGATATGGA+AGG 0.599650 4_2:-71193836 Msa0619860:CDS
GCCTCTGAACTACTAAACAT+TGG 0.599852 4_2:-71193848 Msa0619860:CDS
GGTTGCGCAAGGCAGTAAAG+TGG 0.604150 4_2:-71194902 Msa0619860:CDS
ATCGGAATCAGGACACAACT+CGG 0.604445 4_2:-71196957 Msa0619860:five_prime_UTR
AAGCCAATGAAATTCTGTCA+TGG 0.604976 4_2:+71193582 None:intergenic
TTTCTTGAAACCGATGACGC+AGG 0.607788 4_2:-71189809 Msa0619860:three_prime_UTR
CTCAAGAGAATATCTCCGAA+GGG 0.608613 4_2:-71190284 Msa0619860:CDS
GAAGAAGGACAAAAGAGCAA+AGG 0.610571 4_2:-71189899 Msa0619860:CDS
ACTCAAGAGAATATCTCCGA+AGG 0.611069 4_2:-71190285 Msa0619860:CDS
CGGTATCCAGAAAATCATCA+AGG 0.614471 4_2:-71196886 Msa0619860:intron
TCATGTGATTCTCTATTCGG+CGG 0.614718 4_2:-71195006 Msa0619860:CDS
GCTTACGAGTCCTATATGAA+GGG 0.614942 4_2:-71194294 Msa0619860:CDS
ATTCGATAGTGTTATACGCA+AGG 0.621387 4_2:+71189944 None:intergenic
AACGAATCTATCTGATTGGT+AGG 0.622250 4_2:-71194923 Msa0619860:CDS
AAATCTTTGAAGTTTACCCA+CGG 0.622381 4_2:-71196186 Msa0619860:CDS
CGGAAGTGAACTGAACTCGC+CGG 0.623921 4_2:-71196931 Msa0619860:five_prime_UTR
ATTGTACAGCCCGATTGAGG+AGG 0.626640 4_2:-71196215 Msa0619860:CDS
TCTGATTGGTAGGTTGCGCA+AGG 0.628782 4_2:-71194913 Msa0619860:CDS
GTTGCGCAAGGCAGTAAAGT+GGG 0.628797 4_2:-71194901 Msa0619860:CDS
ACGGAGATTACACTCGCTAT+CGG 0.630014 4_2:-71196377 Msa0619860:intron
CCCGTCAATTAAAACTACAA+AGG 0.633528 4_2:+71189571 None:intergenic
AAATCAGCACAAATGCAGCA+TGG 0.634136 4_2:-71196408 Msa0619860:CDS
CATCTCATAATTCTCAACAA+AGG 0.635370 4_2:+71189784 None:intergenic
ATTTAACAGGGCTGTATACG+AGG 0.648075 4_2:-71193984 Msa0619860:intron
AATATCAAATGCCAAAACAA+GGG 0.652385 4_2:-71193545 Msa0619860:CDS
AGTGTGAAAGATGATTTGAA+TGG 0.655868 4_2:-71192125 Msa0619860:CDS
CTTACGAGTCCTATATGAAG+GGG 0.656319 4_2:-71194293 Msa0619860:CDS
CTTGGCAGAAAATATTTCAG+CGG 0.661052 4_2:-71192341 Msa0619860:CDS
CAATTGCCTGGAAAGCTGGG+GGG 0.661981 4_2:+71189989 None:intergenic
ATCGCAGCGGAATTTGACGC+CGG 0.668025 4_2:-71196906 Msa0619860:five_prime_UTR
AGATATTTGGAAATTTACAG+CGG 0.668791 4_2:-71189737 Msa0619860:three_prime_UTR
TATCATTGACCGGAGCTGAG+CGG 0.688933 4_2:-71190251 Msa0619860:CDS
ACATGCATTGGGGATCATGG+AGG 0.704917 4_2:-71190316 Msa0619860:CDS
GAGCTGGAGAAAGATATCCA+TGG 0.711540 4_2:-71192367 Msa0619860:CDS
GTTTGAGCAAGATCAGAACT+GGG 0.716721 4_2:-71194262 Msa0619860:CDS
GAACTCGCCGGAAATCGCAG+CGG 0.727050 4_2:-71196919 Msa0619860:five_prime_UTR
AAGGACAAAAGAGCAAAGGG+TGG 0.733205 4_2:-71189895 Msa0619860:CDS
GTTGTATAGAACATGCATTG+GGG 0.748586 4_2:-71190326 Msa0619860:CDS
TGTTGCAAAGTCATACAGTG+TGG 0.777758 4_2:-71191059 Msa0619860:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTAAAAAAAAGGAAAA+AGG + chr4_2:71191356-71191375 None:intergenic 10.0%
!!! GTAAAACATTTTTAAAAAAA+AGG + chr4_2:71191363-71191382 None:intergenic 10.0%
!! CTATTAAATTGAAAAAAAAA+AGG - chr4_2:71193019-71193038 Msa0619860:intron 10.0%
!! TAAATATATGCTAAAAATAT+TGG - chr4_2:71193239-71193258 Msa0619860:intron 10.0%
!! CCAAAAAAATATATATATAA+AGG + chr4_2:71196894-71196913 None:intergenic 10.0%
!!! CCTTTATATATATATTTTTT+TGG - chr4_2:71196891-71196910 Msa0619860:five_prime_UTR 10.0%
!!! AAATAAACTTTTCATTTTTC+TGG - chr4_2:71191401-71191420 Msa0619860:intron 15.0%
!! TAGATTAAAATAGTAGAAAA+GGG + chr4_2:71192115-71192134 None:intergenic 15.0%
!! ATAGATTAAAATAGTAGAAA+AGG + chr4_2:71192116-71192135 None:intergenic 15.0%
!!! TTTTCTACTATTTTAATCTA+TGG - chr4_2:71192115-71192134 Msa0619860:CDS 15.0%
!! AAGTCAAATATTATAAATCA+AGG + chr4_2:71192309-71192328 None:intergenic 15.0%
!! TTGATTTATAATATTTGACT+TGG - chr4_2:71192308-71192327 Msa0619860:CDS 15.0%
!! TAACAAATATATTATGTGTA+TGG + chr4_2:71193492-71193511 None:intergenic 15.0%
!!! ACATAATATATTTGTTAATG+TGG - chr4_2:71193495-71193514 Msa0619860:intron 15.0%
!! AAATCCAAAAAAGAAAAAAA+TGG + chr4_2:71193979-71193998 None:intergenic 15.0%
!!! TTTTACAGAAGTTAAAAATT+TGG + chr4_2:71194931-71194950 None:intergenic 15.0%
!!! AAATAAAAAACTCTAAAGAT+GGG + chr4_2:71195031-71195050 None:intergenic 15.0%
!!! TAAATAAAAAACTCTAAAGA+TGG + chr4_2:71195032-71195051 None:intergenic 15.0%
!!! AGTTATTTTTTAAGATCAAA+TGG - chr4_2:71195567-71195586 Msa0619860:intron 15.0%
!!! GATTTTTCAAATGATTTTTT+TGG - chr4_2:71195611-71195630 Msa0619860:intron 15.0%
!! AATCATATTCTAAATTTAGA+AGG + chr4_2:71195939-71195958 None:intergenic 15.0%
!! CATGTATAAATTTCACTAAT+TGG - chr4_2:71189697-71189716 Msa0619860:three_prime_UTR 20.0%
!! TTGAATTATTGAAGACTTAA+TGG - chr4_2:71189836-71189855 Msa0619860:three_prime_UTR 20.0%
!! TGAATTATTGAAGACTTAAT+GGG - chr4_2:71189837-71189856 Msa0619860:three_prime_UTR 20.0%
!! TTAATCGTTAGTAAAAGAAA+CGG + chr4_2:71189984-71190003 None:intergenic 20.0%
!! TATAGAATTCAAACGTTATA+CGG + chr4_2:71190219-71190238 None:intergenic 20.0%
!! AAAAAAAGGAAAAAGGAAAA+AGG + chr4_2:71191349-71191368 None:intergenic 20.0%
!! AAAAAATATTACCAAAAGAG+AGG + chr4_2:71191815-71191834 None:intergenic 20.0%
!!! TTCATTACAACTTCTTTTAA+AGG + chr4_2:71192006-71192025 None:intergenic 20.0%
!!! GAATAGAAAAAAAAGTTGAT+TGG - chr4_2:71192070-71192089 Msa0619860:CDS 20.0%
!! TATAACTTACTTGAAGAAAA+GGG - chr4_2:71192738-71192757 Msa0619860:intron 20.0%
!!! AACTTCATCTTTTTTAAGTT+TGG + chr4_2:71193056-71193075 None:intergenic 20.0%
!! CATAAAATAATAGTAACAGA+GGG + chr4_2:71193284-71193303 None:intergenic 20.0%
!! ACATAAAATAATAGTAACAG+AGG + chr4_2:71193285-71193304 None:intergenic 20.0%
!! AAATTCAATTTAACACCAAA+AGG + chr4_2:71193442-71193461 None:intergenic 20.0%
!! TATATTATGTGTATGGATTT+AGG + chr4_2:71193485-71193504 None:intergenic 20.0%
!!! AAAAAATTGTTAGTTTCCTT+TGG + chr4_2:71193557-71193576 None:intergenic 20.0%
!!! AAAAAAATGTTAGTTTCCTT+TGG + chr4_2:71193695-71193714 None:intergenic 20.0%
!! TTACATTGTCAAGATTTAAT+TGG - chr4_2:71193762-71193781 Msa0619860:intron 20.0%
!!! ACTACCATTTTTTTCTTTTT+TGG - chr4_2:71193972-71193991 Msa0619860:CDS 20.0%
!!! TTTTAACAGATGATGATTAT+AGG - chr4_2:71195056-71195075 Msa0619860:intron 20.0%
!! AGAAGATTATAAGAAACAAA+GGG + chr4_2:71195922-71195941 None:intergenic 20.0%
!! TAGAAGATTATAAGAAACAA+AGG + chr4_2:71195923-71195942 None:intergenic 20.0%
!!! ATTTCTTTTCCTTTTCAATT+TGG - chr4_2:71196096-71196115 Msa0619860:intron 20.0%
!!! TGTACTTTTCAACAAAAAAA+AGG + chr4_2:71196816-71196835 None:intergenic 20.0%
!! ATAATCAATGTTCAAAATTG+GGG + chr4_2:71196865-71196884 None:intergenic 20.0%
!! CATAATCAATGTTCAAAATT+GGG + chr4_2:71196866-71196885 None:intergenic 20.0%
!! TCATAATCAATGTTCAAAAT+TGG + chr4_2:71196867-71196886 None:intergenic 20.0%
!!! AAATTGAAGATTGATTTGAG+AGG + chr4_2:71189752-71189771 None:intergenic 25.0%
! ATCAATGACATTTCAAAAGA+CGG + chr4_2:71190191-71190210 None:intergenic 25.0%
! AACGTTTGAATTCTATAGAT+TGG - chr4_2:71190222-71190241 Msa0619860:intron 25.0%
!!! AAGAATGATTTGGTTTCAAT+TGG - chr4_2:71190490-71190509 Msa0619860:intron 25.0%
! AATGGAAAAACATCTAAAAG+TGG + chr4_2:71191238-71191257 None:intergenic 25.0%
! TAAATGATGATTTCGTATCA+AGG + chr4_2:71191311-71191330 None:intergenic 25.0%
! TTGATACGAAATCATCATTT+AGG - chr4_2:71191310-71191329 Msa0619860:intron 25.0%
!!! TGGAATTTACTTTTGAATTC+AGG - chr4_2:71191463-71191482 Msa0619860:intron 25.0%
!!! TTTGTTTTCACAATTTTGTG+CGG - chr4_2:71191623-71191642 Msa0619860:intron 25.0%
! TTAATCAGTATTGCAACAAA+AGG - chr4_2:71191690-71191709 Msa0619860:intron 25.0%
! CCATTTGATGTAAATAACAA+TGG + chr4_2:71191733-71191752 None:intergenic 25.0%
!!! CCATTGTTATTTACATCAAA+TGG - chr4_2:71191730-71191749 Msa0619860:CDS 25.0%
! TTAATGCTTAGAGTTATTGT+TGG - chr4_2:71191899-71191918 Msa0619860:intron 25.0%
!!! ATAATATTTGACTTGGAGAA+AGG - chr4_2:71192315-71192334 Msa0619860:CDS 25.0%
!!! TAATATTTGACTTGGAGAAA+GGG - chr4_2:71192316-71192335 Msa0619860:CDS 25.0%
! TTACACAATAAACAAGTGTT+TGG + chr4_2:71192423-71192442 None:intergenic 25.0%
! GTATAACTTACTTGAAGAAA+AGG - chr4_2:71192737-71192756 Msa0619860:intron 25.0%
! CATTTGATATTGGAAATCTA+TGG + chr4_2:71192943-71192962 None:intergenic 25.0%
! AATATCAAATGCCAAAACAA+GGG - chr4_2:71192952-71192971 Msa0619860:intron 25.0%
!!! TTTTGGAATCTTTTTCTTTC+TGG - chr4_2:71193152-71193171 Msa0619860:intron 25.0%
!!! TTTGGAATCTTTTTCTTTCT+GGG - chr4_2:71193153-71193172 Msa0619860:intron 25.0%
! AAATTGTTAGTTAACTCATG+TGG - chr4_2:71193522-71193541 Msa0619860:intron 25.0%
! TTCATGAATCACAAACATAA+GGG + chr4_2:71193948-71193967 None:intergenic 25.0%
! ATTCATGAATCACAAACATA+AGG + chr4_2:71193949-71193968 None:intergenic 25.0%
!! TTTATTCTTCTGTGCATTTT+AGG - chr4_2:71194329-71194348 Msa0619860:intron 25.0%
! ACAAATTATCATTCCATTTG+AGG + chr4_2:71194658-71194677 None:intergenic 25.0%
! GGAAGCAAATAAATTAAGAA+GGG + chr4_2:71194854-71194873 None:intergenic 25.0%
! AGGAAGCAAATAAATTAAGA+AGG + chr4_2:71194855-71194874 None:intergenic 25.0%
! CATTTGAAAAATCAACAAAC+AGG + chr4_2:71195604-71195623 None:intergenic 25.0%
!!! TTCAAATGATTTTTTTGGTC+TGG - chr4_2:71195616-71195635 Msa0619860:intron 25.0%
! GAAGGAGATCATAATATAAA+AGG + chr4_2:71195766-71195785 None:intergenic 25.0%
! ATTATAAGAAACAAAGGGAA+GGG + chr4_2:71195917-71195936 None:intergenic 25.0%
! AATTCCCAGATATTCAAAAT+AGG - chr4_2:71196573-71196592 Msa0619860:intron 25.0%
!!! TCATCCTATTTTGAATATCT+GGG + chr4_2:71196580-71196599 None:intergenic 25.0%
!!! TTCATCCTATTTTGAATATC+TGG + chr4_2:71196581-71196600 None:intergenic 25.0%
! TATTCAAAATAGGATGAAGA+AGG - chr4_2:71196583-71196602 Msa0619860:CDS 25.0%
! GTAAATTTCCAAATATCTCT+AGG + chr4_2:71196758-71196777 None:intergenic 25.0%
! AGATATTTGGAAATTTACAG+CGG - chr4_2:71196760-71196779 Msa0619860:intron 25.0%
!! ATATTTAAAAACTGATGACG+TGG - chr4_2:71196787-71196806 Msa0619860:intron 25.0%
!! TATTTAAAAACTGATGACGT+GGG - chr4_2:71196788-71196807 Msa0619860:intron 25.0%
!! TGAATACCTTGATGATTTTC+TGG + chr4_2:71189620-71189639 None:intergenic 30.0%
! TGATCAGAATTGGTTGATTT+CGG + chr4_2:71189900-71189919 None:intergenic 30.0%
AAACCAGTGATTGAGAATTT+GGG + chr4_2:71189930-71189949 None:intergenic 30.0%
! ACTTTTTACATTGACACTGT+AGG - chr4_2:71190255-71190274 Msa0619860:CDS 30.0%
ATTTATACAACCTCCTCAAT+CGG + chr4_2:71190295-71190314 None:intergenic 30.0%
!! AAATCTTTGAAGTTTACCCA+CGG - chr4_2:71190311-71190330 Msa0619860:CDS 30.0%
GAGTGTTAGAAAGAATGATT+TGG - chr4_2:71190480-71190499 Msa0619860:intron 30.0%
TAATTCGATAGCAATGAAGA+TGG + chr4_2:71190529-71190548 None:intergenic 30.0%
TTAACAATCTACACTCTACA+GGG + chr4_2:71190754-71190773 None:intergenic 30.0%
TGTAGATTGTTAAGATGAGT+TGG - chr4_2:71190761-71190780 Msa0619860:intron 30.0%
GTAGATTGTTAAGATGAGTT+GGG - chr4_2:71190762-71190781 Msa0619860:intron 30.0%
! TTTTGTTAAAAGTCCCACAT+TGG - chr4_2:71190913-71190932 Msa0619860:intron 30.0%
TATACTTGGCCTAATCTATA+GGG + chr4_2:71190986-71191005 None:intergenic 30.0%
TTATACTTGGCCTAATCTAT+AGG + chr4_2:71190987-71191006 None:intergenic 30.0%
TCTACTTATTTGTCAGTACT+GGG + chr4_2:71191013-71191032 None:intergenic 30.0%
ATCTACTTATTTGTCAGTAC+TGG + chr4_2:71191014-71191033 None:intergenic 30.0%
! TAGGATGTTTGTTGGAAAAT+GGG + chr4_2:71191095-71191114 None:intergenic 30.0%
! TTAGGATGTTTGTTGGAAAA+TGG + chr4_2:71191096-71191115 None:intergenic 30.0%
TTATCGCAAAAAGCAGTATT+AGG + chr4_2:71191114-71191133 None:intergenic 30.0%
TGAAATGTACGTGATAGAAA+TGG + chr4_2:71191256-71191275 None:intergenic 30.0%
! AAATCATCATTTAGGCCTTT+TGG - chr4_2:71191318-71191337 Msa0619860:intron 30.0%
TCTTCATGTGATTCTCTATT+CGG - chr4_2:71191488-71191507 Msa0619860:intron 30.0%
!!! TTTATTTTGCTGATGAAGCA+TGG - chr4_2:71192147-71192166 Msa0619860:CDS 30.0%
AATCAGTGAACAAATGAAAG+AGG + chr4_2:71192178-71192197 None:intergenic 30.0%
!!! TCATTTGTTCACTGATTTTC+AGG - chr4_2:71192181-71192200 Msa0619860:intron 30.0%
AGAAAGGGAAAAAAATATGC+AGG - chr4_2:71192331-71192350 Msa0619860:CDS 30.0%
TAACCATGATCCTATTTAAC+AGG - chr4_2:71192500-71192519 Msa0619860:intron 30.0%
AACCATGATCCTATTTAACA+GGG - chr4_2:71192501-71192520 Msa0619860:intron 30.0%
!! CCTCTAGTTTAGCTTTAAAA+AGG + chr4_2:71192699-71192718 None:intergenic 30.0%
!!! CCTTTTTAAAGCTAAACTAG+AGG - chr4_2:71192696-71192715 Msa0619860:intron 30.0%
! TTTAAAGCTAAACTAGAGGT+TGG - chr4_2:71192700-71192719 Msa0619860:intron 30.0%
TACTTGAAGAAAAGGGAAAA+TGG - chr4_2:71192745-71192764 Msa0619860:intron 30.0%
ACTTGAAGAAAAGGGAAAAT+GGG - chr4_2:71192746-71192765 Msa0619860:intron 30.0%
!!! CTTGTTTTGGCATTTGATAT+TGG + chr4_2:71192953-71192972 None:intergenic 30.0%
CAATATCAAATGCCAAAACA+AGG - chr4_2:71192951-71192970 Msa0619860:intron 30.0%
AAGATACCAACCTTTCAAAA+TGG + chr4_2:71192981-71193000 None:intergenic 30.0%
! GTAAAATGGCATTTCTGTTT+TGG - chr4_2:71193135-71193154 Msa0619860:intron 30.0%
AAATATTGGTGTGAAGAACA+TGG - chr4_2:71193253-71193272 Msa0619860:intron 30.0%
AACAAATTCAAGAGTTAGGT+TGG + chr4_2:71193720-71193739 None:intergenic 30.0%
TTGCAACAAATTCAAGAGTT+AGG + chr4_2:71193724-71193743 None:intergenic 30.0%
CATAGCATGTTTGAATTGTT+AGG + chr4_2:71193864-71193883 None:intergenic 30.0%
ACATGCTATGTAGTATCAAA+AGG - chr4_2:71193874-71193893 Msa0619860:CDS 30.0%
CATGCTATGTAGTATCAAAA+GGG - chr4_2:71193875-71193894 Msa0619860:CDS 30.0%
ATGCTATGTAGTATCAAAAG+GGG - chr4_2:71193876-71193895 Msa0619860:CDS 30.0%
AGTGTGAAAGATGATTTGAA+TGG - chr4_2:71194372-71194391 Msa0619860:intron 30.0%
! TGATTTGAATGGTCTTGATA+AGG - chr4_2:71194383-71194402 Msa0619860:intron 30.0%
AAAAAAAAACAGCAGCTTTG+AGG + chr4_2:71194620-71194639 None:intergenic 30.0%
ATTTGAGGAGCTAATGTTAA+AGG + chr4_2:71194643-71194662 None:intergenic 30.0%
TTTAACATTAGCTCCTCAAA+TGG - chr4_2:71194642-71194661 Msa0619860:intron 30.0%
GCAAAAGCTGAAAATAACAA+GGG + chr4_2:71194902-71194921 None:intergenic 30.0%
AGCAAAAGCTGAAAATAACA+AGG + chr4_2:71194903-71194922 None:intergenic 30.0%
!!! TTGTTATTTTCAGCTTTTGC+TGG - chr4_2:71194902-71194921 Msa0619860:CDS 30.0%
TTTGTATACCGATAGCATTT+AGG - chr4_2:71194957-71194976 Msa0619860:CDS 30.0%
TGAACTTTCCTAAATGCTAT+CGG + chr4_2:71194968-71194987 None:intergenic 30.0%
TCTTATTGGATGAATAGAGT+CGG - chr4_2:71195145-71195164 Msa0619860:intron 30.0%
! ATGTATACCTTTAGTTTAGG+TGG + chr4_2:71195390-71195409 None:intergenic 30.0%
! AGCATGTATACCTTTAGTTT+AGG + chr4_2:71195393-71195412 None:intergenic 30.0%
! TAACATTTGAAGCTTTCCTA+AGG + chr4_2:71195524-71195543 None:intergenic 30.0%
AATGTTAGATGGCAATAGTA+AGG - chr4_2:71195537-71195556 Msa0619860:intron 30.0%
GTTTCAATGTTATGGAAGTT+AGG + chr4_2:71195678-71195697 None:intergenic 30.0%
TAACAAGCGTTTCAATGTTA+TGG + chr4_2:71195686-71195705 None:intergenic 30.0%
! TGAAATCAATTGTTGTTGAC+TGG - chr4_2:71195723-71195742 Msa0619860:intron 30.0%
! GAAATCAATTGTTGTTGACT+GGG - chr4_2:71195724-71195743 Msa0619860:intron 30.0%
ACCTAAAGATGGTAATCTAT+CGG - chr4_2:71195800-71195819 Msa0619860:intron 30.0%
GATTATAAGAAACAAAGGGA+AGG + chr4_2:71195918-71195937 None:intergenic 30.0%
GTTCTATACAACTGTTAGAA+CGG + chr4_2:71196163-71196182 None:intergenic 30.0%
AGTTGTATAGAACATGCATT+GGG - chr4_2:71196170-71196189 Msa0619860:CDS 30.0%
ATCTCCAATATATCATTGAC+CGG - chr4_2:71196236-71196255 Msa0619860:intron 30.0%
!!! TCCTATGCTATTTTTTTGAG+CGG - chr4_2:71196288-71196307 Msa0619860:intron 30.0%
AAACATCAAGTTTCTCCAAT+AGG + chr4_2:71196433-71196452 None:intergenic 30.0%
! GGCTTTATAAGCAGAATATT+TGG - chr4_2:71196623-71196642 Msa0619860:CDS 30.0%
AGCATATTTGATTCAGTGTT+TGG - chr4_2:71196649-71196668 Msa0619860:exon 30.0%
CATCTCATAATTCTCAACAA+AGG + chr4_2:71196716-71196735 None:intergenic 30.0%
AAAACTACAAAGGCAACTAT+TGG + chr4_2:71196919-71196938 None:intergenic 30.0%
!!! GCCTTTGTAGTTTTAATTGA+CGG - chr4_2:71196925-71196944 Msa0619860:five_prime_UTR 30.0%
!!! CCTTTGTAGTTTTAATTGAC+GGG - chr4_2:71196926-71196945 Msa0619860:five_prime_UTR 30.0%
!!! CTTTGTAGTTTTAATTGACG+GGG - chr4_2:71196927-71196946 Msa0619860:five_prime_UTR 30.0%
!!! TTTGTAGTTTTAATTGACGG+GGG - chr4_2:71196928-71196947 Msa0619860:five_prime_UTR 30.0%
AAACAAATTGCATCGGAATC+AGG - chr4_2:71189529-71189548 Msa0619860:three_prime_UTR 35.0%
!! CTTGATGATTTTCTGGATAC+CGG + chr4_2:71189613-71189632 None:intergenic 35.0%
AACTACAACAATGACAGATC+TGG + chr4_2:71189728-71189747 None:intergenic 35.0%
CAAACCAGTGATTGAGAATT+TGG + chr4_2:71189931-71189950 None:intergenic 35.0%
! TTTTACATTGACACTGTAGG+AGG - chr4_2:71190258-71190277 Msa0619860:CDS 35.0%
TTTATACAACCTCCTCAATC+GGG + chr4_2:71190294-71190313 None:intergenic 35.0%
AGTGACATTAGACTCAGTTA+AGG + chr4_2:71190360-71190379 None:intergenic 35.0%
AGTCTAATGTCACTGAAGTA+AGG - chr4_2:71190366-71190385 Msa0619860:CDS 35.0%
TGAAATTGTGTTACCGAAGA+AGG - chr4_2:71190454-71190473 Msa0619860:intron 35.0%
TCTAACACTCTTTCCTTCTT+CGG + chr4_2:71190470-71190489 None:intergenic 35.0%
! TTTGGTTTCAATTGGCTGTT+AGG - chr4_2:71190498-71190517 Msa0619860:intron 35.0%
ATGTGTCCTCTTAAGACTTA+CGG - chr4_2:71190552-71190571 Msa0619860:intron 35.0%
GACTAGAGCTAAATAGTAGT+AGG - chr4_2:71190576-71190595 Msa0619860:intron 35.0%
AGCTAAATAGTAGTAGGCTA+GGG - chr4_2:71190582-71190601 Msa0619860:intron 35.0%
ACCTAAGAAAATGGAATCCA+TGG - chr4_2:71190715-71190734 Msa0619860:intron 35.0%
CCTAAGAAAATGGAATCCAT+GGG - chr4_2:71190716-71190735 Msa0619860:intron 35.0%
CTTAACAATCTACACTCTAC+AGG + chr4_2:71190755-71190774 None:intergenic 35.0%
! AGAGAAGATAACTTTAGGGA+GGG + chr4_2:71191053-71191072 None:intergenic 35.0%
GCAGAGAGAAGATAACTTTA+GGG + chr4_2:71191057-71191076 None:intergenic 35.0%
AGCAGTATTAGGATGTTTGT+TGG + chr4_2:71191103-71191122 None:intergenic 35.0%
TCTAAGAGTTCAAAGCTGAA+TGG - chr4_2:71191157-71191176 Msa0619860:intron 35.0%
ATGATGATTTCGTATCAAGG+CGG + chr4_2:71191308-71191327 None:intergenic 35.0%
AGGAAAAAGGACAAACCAAA+AGG + chr4_2:71191336-71191355 None:intergenic 35.0%
TATCTACACATGCTTAACAG+TGG - chr4_2:71191437-71191456 Msa0619860:intron 35.0%
TAGATTCGTTGAGATGCATT+TGG + chr4_2:71191564-71191583 None:intergenic 35.0%
TCTCAACGAATCTATCTGAT+TGG - chr4_2:71191570-71191589 Msa0619860:intron 35.0%
AACGAATCTATCTGATTGGT+AGG - chr4_2:71191574-71191593 Msa0619860:intron 35.0%
TATTACCAAAAGAGAGGAGT+GGG + chr4_2:71191809-71191828 None:intergenic 35.0%
ATATTACCAAAAGAGAGGAG+TGG + chr4_2:71191810-71191829 None:intergenic 35.0%
! TTGTTGGATTTGTTCCTTTC+CGG - chr4_2:71191915-71191934 Msa0619860:intron 35.0%
TGTATCAGATTATACCGGAA+AGG + chr4_2:71191932-71191951 None:intergenic 35.0%
TGCTCTGTATCAGATTATAC+CGG + chr4_2:71191937-71191956 None:intergenic 35.0%
CATGTAATGCTCTGTATCAA+AGG + chr4_2:71191975-71191994 None:intergenic 35.0%
!! TAAAGCACTTCAAAAGTGCT+AGG - chr4_2:71192267-71192286 Msa0619860:CDS 35.0%
TCATGGTTAAAAACTCGACA+GGG + chr4_2:71192489-71192508 None:intergenic 35.0%
ATCATGGTTAAAAACTCGAC+AGG + chr4_2:71192490-71192509 None:intergenic 35.0%
GTTAGGGAAATATGGAGATT+TGG - chr4_2:71192537-71192556 Msa0619860:intron 35.0%
AGATACTGCCTTCACAAAAT+TGG - chr4_2:71192610-71192629 Msa0619860:intron 35.0%
ACTACTAAACATTGGCGATA+TGG - chr4_2:71192657-71192676 Msa0619860:intron 35.0%
!! GCTTTAAAAAGGTCTAATGC+AGG + chr4_2:71192688-71192707 None:intergenic 35.0%
GATAACTTAGTGTTTGTACC+AGG - chr4_2:71192856-71192875 Msa0619860:intron 35.0%
CTTCCATGACAGAATTTCAT+TGG - chr4_2:71192912-71192931 Msa0619860:intron 35.0%
AAGCCAATGAAATTCTGTCA+TGG + chr4_2:71192918-71192937 None:intergenic 35.0%
! ATGACAGAATTTCATTGGCT+TGG - chr4_2:71192917-71192936 Msa0619860:intron 35.0%
!!! GAAATGCCATTTTACAGCAT+GGG + chr4_2:71193130-71193149 None:intergenic 35.0%
!!! AGAAATGCCATTTTACAGCA+TGG + chr4_2:71193131-71193150 None:intergenic 35.0%
ACAAATATTTCTCTGATCCC+TGG - chr4_2:71193363-71193382 Msa0619860:intron 35.0%
AAGTAAAATCCACTAGTCCA+GGG + chr4_2:71193383-71193402 None:intergenic 35.0%
!! AGTGGATTTTACTTCTGACT+TGG - chr4_2:71193389-71193408 Msa0619860:intron 35.0%
!! TAACACCAAAAGGAGCATTA+TGG + chr4_2:71193432-71193451 None:intergenic 35.0%
TTGCAACAAATTCAAGAGCT+AGG + chr4_2:71193584-71193603 None:intergenic 35.0%
! CTGAATAATTTTATCAGCCC+AGG - chr4_2:71194108-71194127 Msa0619860:intron 35.0%
! GCTGAAATATTTTCTGCCAA+GGG + chr4_2:71194157-71194176 None:intergenic 35.0%
CTTGGCAGAAAATATTTCAG+CGG - chr4_2:71194156-71194175 Msa0619860:intron 35.0%
CTTATATGATCTCTTGCTAC+AGG - chr4_2:71194536-71194555 Msa0619860:intron 35.0%
GCAAGTTCACAAACAAAACA+TGG + chr4_2:71194569-71194588 None:intergenic 35.0%
CTATCTGATTTAGTCAGTTC+TGG - chr4_2:71194711-71194730 Msa0619860:intron 35.0%
!! TGATTTAGTCAGTTCTGGAA+GGG - chr4_2:71194716-71194735 Msa0619860:intron 35.0%
! AGAGTGTTCATGCAAAAGTT+TGG - chr4_2:71194770-71194789 Msa0619860:intron 35.0%
TCCATAAATTCTACCGTGAT+GGG + chr4_2:71195102-71195121 None:intergenic 35.0%
TTCCATAAATTCTACCGTGA+TGG + chr4_2:71195103-71195122 None:intergenic 35.0%
TCACGGTAGAATTTATGGAA+AGG - chr4_2:71195103-71195122 Msa0619860:intron 35.0%
CTTATTGGATGAATAGAGTC+GGG - chr4_2:71195146-71195165 Msa0619860:intron 35.0%
GTCGGGAATAAATGTTATAG+TGG - chr4_2:71195163-71195182 Msa0619860:intron 35.0%
! AAGTTTTTCTCTCCTCTCAT+AGG - chr4_2:71195268-71195287 Msa0619860:intron 35.0%
! AGTTTTTCTCTCCTCTCATA+GGG - chr4_2:71195269-71195288 Msa0619860:intron 35.0%
AGTATAACCACATCTGTTTC+TGG - chr4_2:71195347-71195366 Msa0619860:intron 35.0%
TTAAAGTCCAGAAACAGATG+TGG + chr4_2:71195357-71195376 None:intergenic 35.0%
GATGTTTCCACCTAAACTAA+AGG - chr4_2:71195380-71195399 Msa0619860:intron 35.0%
GGAAAGCTTCAAATGTTAGA+TGG - chr4_2:71195526-71195545 Msa0619860:intron 35.0%
CAATGTTATGGAAGTTAGGA+TGG + chr4_2:71195674-71195693 None:intergenic 35.0%
TTGATTTCACACTCAACTTC+AGG + chr4_2:71195712-71195731 None:intergenic 35.0%
TATTATGATCTCCTTCAACC+AGG - chr4_2:71195770-71195789 Msa0619860:intron 35.0%
ATTACCATCTTTAGGTCTAC+AGG + chr4_2:71195796-71195815 None:intergenic 35.0%
CCTAAAGATGGTAATCTATC+GGG - chr4_2:71195801-71195820 Msa0619860:intron 35.0%
CATAGTCTGCCAAATTGAAA+AGG + chr4_2:71196108-71196127 None:intergenic 35.0%
! CTTTTCAATTTGGCAGACTA+TGG - chr4_2:71196106-71196125 Msa0619860:intron 35.0%
GACTATGGTGAAAGAATTAG+AGG - chr4_2:71196121-71196140 Msa0619860:intron 35.0%
CAGTTGTATAGAACATGCAT+TGG - chr4_2:71196169-71196188 Msa0619860:CDS 35.0%
GTTGTATAGAACATGCATTG+GGG - chr4_2:71196171-71196190 Msa0619860:CDS 35.0%
TGATATATTGGAGATCCCTT+CGG + chr4_2:71196231-71196250 None:intergenic 35.0%
!!! CCTATGCTATTTTTTTGAGC+GGG - chr4_2:71196289-71196308 Msa0619860:intron 35.0%
GTAATCCTATCTGTTTCAGT+TGG - chr4_2:71196400-71196419 Msa0619860:CDS 35.0%
TTTCTCCAACTGAAACAGAT+AGG + chr4_2:71196408-71196427 None:intergenic 35.0%
TCAGTTGGAGAAATTCCTAT+TGG - chr4_2:71196415-71196434 Msa0619860:CDS 35.0%
ATTCGATAGTGTTATACGCA+AGG + chr4_2:71196556-71196575 None:intergenic 35.0%
AAGAAGGACAAAAGAGCAAA+GGG - chr4_2:71196599-71196618 Msa0619860:CDS 35.0%
! TTGAGTTGCCTAGAGATATT+TGG - chr4_2:71196747-71196766 Msa0619860:intron 35.0%
CCCGTCAATTAAAACTACAA+AGG + chr4_2:71196929-71196948 None:intergenic 35.0%
CGGTATCCAGAAAATCATCA+AGG - chr4_2:71189611-71189630 Msa0619860:three_prime_UTR 40.0%
AGAGAATCAATCATCTGCCA+TGG - chr4_2:71189863-71189882 Msa0619860:exon 40.0%
GGGAACAATCTGATCAGAAT+TGG + chr4_2:71189910-71189929 None:intergenic 40.0%
GTTCCCAAATTCTCAATCAC+TGG - chr4_2:71189924-71189943 Msa0619860:CDS 40.0%
AAATCAGCACAAATGCAGCA+TGG - chr4_2:71190089-71190108 Msa0619860:intron 40.0%
! GTATTTTCGCTGTTGCTAAC+TGG - chr4_2:71190146-71190165 Msa0619860:intron 40.0%
TGCATCAGAAAAGAGAGATG+CGG + chr4_2:71190405-71190424 None:intergenic 40.0%
TAGTCACCGTAAGTCTTAAG+AGG + chr4_2:71190561-71190580 None:intergenic 40.0%
GAGCTAAATAGTAGTAGGCT+AGG - chr4_2:71190581-71190600 Msa0619860:intron 40.0%
ATTGCAAAGCACACGTTTGT+GGG + chr4_2:71190616-71190635 None:intergenic 40.0%
AATCGTGGCACCTAAGAAAA+TGG - chr4_2:71190706-71190725 Msa0619860:intron 40.0%
! CCCATGGATTCCATTTTCTT+AGG + chr4_2:71190719-71190738 None:intergenic 40.0%
AAAATGGAATCCATGGGAAG+CGG - chr4_2:71190722-71190741 Msa0619860:intron 40.0%
!! ATAGGCGCTGATATCATAGT+AGG + chr4_2:71190801-71190820 None:intergenic 40.0%
!! CAGTACTGGGCTTTTATACT+TGG + chr4_2:71191000-71191019 None:intergenic 40.0%
! GAGAGAAGATAACTTTAGGG+AGG + chr4_2:71191054-71191073 None:intergenic 40.0%
GGCAGAGAGAAGATAACTTT+AGG + chr4_2:71191058-71191077 None:intergenic 40.0%
TGGAAAATGGGTAAAGAGTG+TGG + chr4_2:71191083-71191102 None:intergenic 40.0%
!!! TTTTTGCGATAAGCACTGGT+AGG - chr4_2:71191122-71191141 Msa0619860:intron 40.0%
AAGAGTTCAAAGCTGAATGG+TGG - chr4_2:71191160-71191179 Msa0619860:intron 40.0%
TGATGATTTCGTATCAAGGC+GGG + chr4_2:71191307-71191326 None:intergenic 40.0%
CACATGCTTAACAGTGGAAT+TGG - chr4_2:71191443-71191462 Msa0619860:intron 40.0%
TCATGTGATTCTCTATTCGG+CGG - chr4_2:71191491-71191510 Msa0619860:intron 40.0%
TGAGATGCATTTGGTCCATT+TGG + chr4_2:71191555-71191574 None:intergenic 40.0%
! TTCACAATTTTGTGCGGTCA+AGG - chr4_2:71191629-71191648 Msa0619860:intron 40.0%
! GTATTGCAACAAAAGGCATG+TGG - chr4_2:71191697-71191716 Msa0619860:intron 40.0%
! TATTTCCCACTCCTCTCTTT+TGG - chr4_2:71191801-71191820 Msa0619860:CDS 40.0%
!! GATACAGAGCATTGCATGTT+AGG - chr4_2:71191946-71191965 Msa0619860:intron 40.0%
GCTTACGAGTCCTATATGAA+GGG - chr4_2:71192203-71192222 Msa0619860:intron 40.0%
CTTACGAGTCCTATATGAAG+GGG - chr4_2:71192204-71192223 Msa0619860:intron 40.0%
CAACAAACTCCCCTTCATAT+AGG + chr4_2:71192216-71192235 None:intergenic 40.0%
TGTTTGAGCAAGATCAGAAC+TGG - chr4_2:71192234-71192253 Msa0619860:intron 40.0%
GTTTGAGCAAGATCAGAACT+GGG - chr4_2:71192235-71192254 Msa0619860:intron 40.0%
AGCCCTGTTAAATAGGATCA+TGG + chr4_2:71192506-71192525 None:intergenic 40.0%
CGTATACAGCCCTGTTAAAT+AGG + chr4_2:71192513-71192532 None:intergenic 40.0%
ATTTAACAGGGCTGTATACG+AGG - chr4_2:71192513-71192532 Msa0619860:intron 40.0%
TACGAGGAGTTAGGGAAATA+TGG - chr4_2:71192529-71192548 Msa0619860:intron 40.0%
TGAAGGCAGTATCTGATACT+AGG + chr4_2:71192604-71192623 None:intergenic 40.0%
!! TTGACTGGCCAATTTTGTGA+AGG + chr4_2:71192621-71192640 None:intergenic 40.0%
GCCTCTGAACTACTAAACAT+TGG - chr4_2:71192649-71192668 Msa0619860:intron 40.0%
GCCAATGTTTAGTAGTTCAG+AGG + chr4_2:71192653-71192672 None:intergenic 40.0%
CTAAACATTGGCGATATGGA+AGG - chr4_2:71192661-71192680 Msa0619860:intron 40.0%
!! CAAAATGGCAACCCTTGTTT+TGG + chr4_2:71192966-71192985 None:intergenic 40.0%
!!! ACAAGGGTTGCCATTTTGAA+AGG - chr4_2:71192968-71192987 Msa0619860:intron 40.0%
ACGTGTATGTAACCACCTAA+TGG - chr4_2:71193095-71193114 Msa0619860:intron 40.0%
! CTTTTGCCCATGCTGTAAAA+TGG - chr4_2:71193121-71193140 Msa0619860:intron 40.0%
ATCTGCTGAACATAACTCGT+TGG - chr4_2:71193318-71193337 Msa0619860:intron 40.0%
TCTGCTGAACATAACTCGTT+GGG - chr4_2:71193319-71193338 Msa0619860:intron 40.0%
CTCGTTGGGGTAATATAGTT+TGG - chr4_2:71193333-71193352 Msa0619860:intron 40.0%
GAAGTAAAATCCACTAGTCC+AGG + chr4_2:71193384-71193403 None:intergenic 40.0%
GCATTATGGATGTCAACCTA+GGG + chr4_2:71193418-71193437 None:intergenic 40.0%
AGCATTATGGATGTCAACCT+AGG + chr4_2:71193419-71193438 None:intergenic 40.0%
! GACATCCATAATGCTCCTTT+TGG - chr4_2:71193424-71193443 Msa0619860:intron 40.0%
ATCAAAAGGGGAATTGTTGC+TGG - chr4_2:71193888-71193907 Msa0619860:CDS 40.0%
! CGCTGAAATATTTTCTGCCA+AGG + chr4_2:71194158-71194177 None:intergenic 40.0%
TATTTCAGCGGACAAAAGAC+TGG - chr4_2:71194168-71194187 Msa0619860:intron 40.0%
ATGATGCTAGAGGCTGTATT+CGG - chr4_2:71194221-71194240 Msa0619860:intron 40.0%
!! TATTCGGGCTGATTTGGTAT+TGG - chr4_2:71194237-71194256 Msa0619860:CDS 40.0%
!! CTGATTTAGTCAGTTCTGGA+AGG - chr4_2:71194715-71194734 Msa0619860:intron 40.0%
!!! AGCTAACTTCTTCTGGCTTT+TGG + chr4_2:71194743-71194762 None:intergenic 40.0%
TCAGCAAAGCTAACTTCTTC+TGG + chr4_2:71194750-71194769 None:intergenic 40.0%
!! GAAGGGATATCTCTAAGATC+AGG + chr4_2:71194837-71194856 None:intergenic 40.0%
TGATGGGAGCTTTACATACT+AGG + chr4_2:71195086-71195105 None:intergenic 40.0%
AGTATGTAAAGCTCCCATCA+CGG - chr4_2:71195086-71195105 Msa0619860:intron 40.0%
TCCCATCACGGTAGAATTTA+TGG - chr4_2:71195098-71195117 Msa0619860:intron 40.0%
CCAATAAGAGATGACACACT+GGG + chr4_2:71195134-71195153 None:intergenic 40.0%
TCCAATAAGAGATGACACAC+TGG + chr4_2:71195135-71195154 None:intergenic 40.0%
TCTTGCTTTCGCAAACATCA+AGG + chr4_2:71195246-71195265 None:intergenic 40.0%
CATGCTTATGACTTATGTGC+AGG - chr4_2:71195407-71195426 Msa0619860:intron 40.0%
TGTTGCAAAGTCATACAGTG+TGG - chr4_2:71195438-71195457 Msa0619860:intron 40.0%
AGTTTAGCTGAAGATGCCTT+AGG - chr4_2:71195505-71195524 Msa0619860:intron 40.0%
! ATCAATTGTTGTTGACTGGG+AGG - chr4_2:71195727-71195746 Msa0619860:intron 40.0%
GACTGGGAGGAACTAAATAA+AGG - chr4_2:71195740-71195759 Msa0619860:intron 40.0%
CCCGATAGATTACCATCTTT+AGG + chr4_2:71195804-71195823 None:intergenic 40.0%
!! TGTGCAGACTCTAAAGTTGT+TGG + chr4_2:71195869-71195888 None:intergenic 40.0%
ACTCAAGAGAATATCTCCGA+AGG - chr4_2:71196212-71196231 Msa0619860:CDS 40.0%
CTCAAGAGAATATCTCCGAA+GGG - chr4_2:71196213-71196232 Msa0619860:CDS 40.0%
AGCTCCGGTCAATGATATAT+TGG + chr4_2:71196243-71196262 None:intergenic 40.0%
CCCGCTCAAAAAAATAGCAT+AGG + chr4_2:71196292-71196311 None:intergenic 40.0%
TGATGTTTATGAGTCTGCTG+TGG - chr4_2:71196445-71196464 Msa0619860:intron 40.0%
GATGTTTATGAGTCTGCTGT+GGG - chr4_2:71196446-71196465 Msa0619860:intron 40.0%
GAAGAAGGACAAAAGAGCAA+AGG - chr4_2:71196598-71196617 Msa0619860:CDS 40.0%
ATCGGAATCAGGACACAACT+CGG - chr4_2:71189540-71189559 Msa0619860:three_prime_UTR 45.0%
TCAAATTCCGCTGCGATTTC+CGG + chr4_2:71189588-71189607 None:intergenic 45.0%
!! TTTCGGATCATCGACTTCCA+TGG + chr4_2:71189883-71189902 None:intergenic 45.0%
ACGGAGATTACACTCGCTAT+CGG - chr4_2:71190120-71190139 Msa0619860:intron 45.0%
GATTGCAAAGCACACGTTTG+TGG + chr4_2:71190617-71190636 None:intergenic 45.0%
GCGACAGTTATAAGCATGAG+TGG - chr4_2:71190662-71190681 Msa0619860:intron 45.0%
GTTCACAGTCCATGTAATCG+TGG - chr4_2:71190691-71190710 Msa0619860:intron 45.0%
! TCTTAGGTGCCACGATTACA+TGG + chr4_2:71190703-71190722 None:intergenic 45.0%
TGGTCCAATGGATCTTGGAT+AGG + chr4_2:71190819-71190838 None:intergenic 45.0%
TGCTATCAGCTCACCACTAT+CGG - chr4_2:71190841-71190860 Msa0619860:intron 45.0%
! GGTCTTGTCTCATCCAATGT+GGG + chr4_2:71190929-71190948 None:intergenic 45.0%
! AGGTCTTGTCTCATCCAATG+TGG + chr4_2:71190930-71190949 None:intergenic 45.0%
CAGCATACAAACACATCGTC+AGG + chr4_2:71190950-71190969 None:intergenic 45.0%
GACGATGTGTTTGTATGCTG+TGG - chr4_2:71190950-71190969 Msa0619860:intron 45.0%
CAGTCCTCACCCTATAGATT+AGG - chr4_2:71190974-71190993 Msa0619860:CDS 45.0%
TTGGCCTAATCTATAGGGTG+AGG + chr4_2:71190981-71191000 None:intergenic 45.0%
! AAATGGGTAAAGAGTGTGGC+AGG + chr4_2:71191079-71191098 None:intergenic 45.0%
!!! CTGCTTTTTGCGATAAGCAC+TGG - chr4_2:71191118-71191137 Msa0619860:intron 45.0%
GAGAAAAGGCAGCTTCCAAA+TGG - chr4_2:71191537-71191556 Msa0619860:intron 45.0%
!! GGCAGATTCTAGGACATCTT+TGG - chr4_2:71191650-71191669 Msa0619860:intron 45.0%
! TAGGACATCTTTGGAAGCTG+AGG - chr4_2:71191659-71191678 Msa0619860:intron 45.0%
! AACAAAAGGCATGTGGCAAC+TGG - chr4_2:71191704-71191723 Msa0619860:intron 45.0%
GGCTTACGAGTCCTATATGA+AGG - chr4_2:71192202-71192221 Msa0619860:intron 45.0%
TGCAGGAACAAGCTTATGCT+TGG - chr4_2:71192348-71192367 Msa0619860:CDS 45.0%
!! ACCAAGTTTTGTGTCGTGAG+CGG - chr4_2:71192563-71192582 Msa0619860:intron 45.0%
CAGAGGCTTGTAGATTTGAC+TGG + chr4_2:71192636-71192655 None:intergenic 45.0%
!!! GGGTTGCCATTTTGAAAGGT+TGG - chr4_2:71192972-71192991 Msa0619860:intron 45.0%
GTTACATACACGTGAGGCAA+AGG + chr4_2:71193088-71193107 None:intergenic 45.0%
TAGGTGGTTACATACACGTG+AGG + chr4_2:71193094-71193113 None:intergenic 45.0%
CATGGGCAAAAGAGACCATT+AGG + chr4_2:71193113-71193132 None:intergenic 45.0%
CTGCTGAACATAACTCGTTG+GGG - chr4_2:71193320-71193339 Msa0619860:intron 45.0%
!! ACTTCTGACTTGGATACCCT+AGG - chr4_2:71193399-71193418 Msa0619860:intron 45.0%
! AATTTTATCAGCCCAGGAGC+TGG - chr4_2:71194114-71194133 Msa0619860:intron 45.0%
GATATCTTTCTCCAGCTCCT+GGG + chr4_2:71194128-71194147 None:intergenic 45.0%
GAGCTGGAGAAAGATATCCA+TGG - chr4_2:71194130-71194149 Msa0619860:intron 45.0%
GAAAGATATCCATGGTCCCT+TGG - chr4_2:71194138-71194157 Msa0619860:intron 45.0%
! TATTTTCTGCCAAGGGACCA+TGG + chr4_2:71194150-71194169 None:intergenic 45.0%
TCTGCATACCATGATGCTAG+AGG - chr4_2:71194211-71194230 Msa0619860:intron 45.0%
GAATACAGCCTCTAGCATCA+TGG + chr4_2:71194222-71194241 None:intergenic 45.0%
TGATGCTAGAGGCTGTATTC+GGG - chr4_2:71194222-71194241 Msa0619860:intron 45.0%
ACTTTCTGCATTTCCTGCAG+TGG + chr4_2:71194355-71194374 None:intergenic 45.0%
CAACAAAAGGTTGCGCTCAA+TGG + chr4_2:71194436-71194455 None:intergenic 45.0%
! CATTGAGCGCAACCTTTTGT+TGG - chr4_2:71194434-71194453 Msa0619860:intron 45.0%
TTGCAACCCTGACCAACAAA+AGG + chr4_2:71194449-71194468 None:intergenic 45.0%
!!! GTTTGGCTTTTCGAGCAGAA+AGG - chr4_2:71194787-71194806 Msa0619860:intron 45.0%
CATGCATGTGCAGTGCAATT+AGG + chr4_2:71194875-71194894 None:intergenic 45.0%
CCCAGTGTGTCATCTCTTAT+TGG - chr4_2:71195131-71195150 Msa0619860:intron 45.0%
TGCTCAATTGCCCTTTCCTA+GGG + chr4_2:71195296-71195315 None:intergenic 45.0%
ATACAGTGTGGCTGGAAAGA+GGG - chr4_2:71195450-71195469 Msa0619860:intron 45.0%
AAGATCTCCTCTGATCTGTC+AGG + chr4_2:71195827-71195846 None:intergenic 45.0%
! TGCACAGTGTTTTCGCGATA+TGG - chr4_2:71195883-71195902 Msa0619860:intron 45.0%
AGAACATGCATTGGGGATCA+TGG - chr4_2:71196178-71196197 Msa0619860:CDS 45.0%
AAGGACAAAAGAGCAAAGGG+TGG - chr4_2:71196602-71196621 Msa0619860:CDS 45.0%
TTTCTTGAAACCGATGACGC+AGG - chr4_2:71196688-71196707 Msa0619860:intron 45.0%
AACAAAGGAACCTGCGTCAT+CGG + chr4_2:71196701-71196720 None:intergenic 45.0%
TTAATTGACGGGGGATAGCA+TGG - chr4_2:71196937-71196956 Msa0619860:five_prime_UTR 45.0%
TAATTGACGGGGGATAGCAT+GGG - chr4_2:71196938-71196957 Msa0619860:five_prime_UTR 45.0%
!! TAATAATATATTTCTTAATA+TGG - chr4_2:71193637-71193656 Msa0619860:intron 5.0%
!!! ATATTTTCATAAATTATATT+TGG - chr4_2:71196838-71196857 Msa0619860:intron 5.0%
!!! CTTTATATATATATTTTTTT+GGG - chr4_2:71196892-71196911 Msa0619860:five_prime_UTR 5.0%
ATCAGGACACAACTCGGAGT+CGG - chr4_2:71189546-71189565 Msa0619860:three_prime_UTR 50.0%
GCAATTGCGAAATCGCGTAG+GGG + chr4_2:71189662-71189681 None:intergenic 50.0%
CGCAATTGCGAAATCGCGTA+GGG + chr4_2:71189663-71189682 None:intergenic 50.0%
! ATGCAGCATGGTTTGCGTCA+CGG - chr4_2:71190101-71190120 Msa0619860:intron 50.0%
TCGCTGTTGCTAACTGGATG+CGG - chr4_2:71190152-71190171 Msa0619860:intron 50.0%
GGTATTGTACAGCCCGATTG+AGG - chr4_2:71190279-71190298 Msa0619860:CDS 50.0%
ATTGTACAGCCCGATTGAGG+AGG - chr4_2:71190282-71190301 Msa0619860:CDS 50.0%
TTGAAGTTTACCCACGGTCG+TGG - chr4_2:71190317-71190336 Msa0619860:CDS 50.0%
AGCGCCTATCCAAGATCCAT+TGG - chr4_2:71190812-71190831 Msa0619860:intron 50.0%
! GATAGTGGTGAGCTGATAGC+AGG + chr4_2:71190842-71190861 None:intergenic 50.0%
GCTATCAGCTCACCACTATC+GGG - chr4_2:71190842-71190861 Msa0619860:intron 50.0%
ACACGCCTGATGTGAAGTCT+TGG - chr4_2:71190876-71190895 Msa0619860:intron 50.0%
CACGCCTGATGTGAAGTCTT+GGG - chr4_2:71190877-71190896 Msa0619860:intron 50.0%
CATGCCCAAGACTTCACATC+AGG + chr4_2:71190884-71190903 None:intergenic 50.0%
GATGTGAAGTCTTGGGCATG+AGG - chr4_2:71190884-71190903 Msa0619860:intron 50.0%
! CTTTAGGGAGGGTGATAGAC+AGG + chr4_2:71191042-71191061 None:intergenic 50.0%
GGAGTCATGCCATGGAGAAA+AGG - chr4_2:71191523-71191542 Msa0619860:intron 50.0%
! TGGAAGCTGCCTTTTCTCCA+TGG + chr4_2:71191535-71191554 None:intergenic 50.0%
TCTGATTGGTAGGTTGCGCA+AGG - chr4_2:71191584-71191603 Msa0619860:intron 50.0%
GTTGCGCAAGGCAGTAAAGT+GGG - chr4_2:71191596-71191615 Msa0619860:intron 50.0%
GCAAGATCAGAACTGGGATG+TGG - chr4_2:71192241-71192260 Msa0619860:intron 50.0%
AGGGCTGTATACGAGGAGTT+AGG - chr4_2:71192520-71192539 Msa0619860:intron 50.0%
GGGCTGTATACGAGGAGTTA+GGG - chr4_2:71192521-71192540 Msa0619860:intron 50.0%
!! CCAAGTTTTGTGTCGTGAGC+GGG - chr4_2:71192564-71192583 Msa0619860:intron 50.0%
TTGAGATCTTGCCTCAGCCA+TGG + chr4_2:71192885-71192904 None:intergenic 50.0%
GGGCAAAAGAGACCATTAGG+TGG + chr4_2:71193110-71193129 None:intergenic 50.0%
! TTCTCTGATCCCTGGACTAG+TGG - chr4_2:71193371-71193390 Msa0619860:intron 50.0%
CATGTGGATGTCAGAGCCAA+AGG - chr4_2:71193538-71193557 Msa0619860:CDS 50.0%
CATGTCGATGTCAGAGCCAA+AGG - chr4_2:71193676-71193695 Msa0619860:intron 50.0%
GGATATCTTTCTCCAGCTCC+TGG + chr4_2:71194129-71194148 None:intergenic 50.0%
AGGCTGTATTCGGGCTGATT+TGG - chr4_2:71194231-71194250 Msa0619860:CDS 50.0%
! TGTGCATTTTAGGCCACTGC+AGG - chr4_2:71194339-71194358 Msa0619860:intron 50.0%
AAGGCTGTCAGTGCTGTCTT+AGG - chr4_2:71194402-71194421 Msa0619860:intron 50.0%
! AGCGCAACCTTTTGTTGGTC+AGG - chr4_2:71194439-71194458 Msa0619860:intron 50.0%
! GCGCAACCTTTTGTTGGTCA+GGG - chr4_2:71194440-71194459 Msa0619860:intron 50.0%
GAGCAGAAAGGTTGTCTTGC+TGG - chr4_2:71194799-71194818 Msa0619860:intron 50.0%
GCTCAATTGCCCTTTCCTAG+GGG + chr4_2:71195295-71195314 None:intergenic 50.0%
CTGCTCAATTGCCCTTTCCT+AGG + chr4_2:71195297-71195316 None:intergenic 50.0%
GGAAAGGGCAATTGAGCAGT+AGG - chr4_2:71195298-71195317 Msa0619860:intron 50.0%
AAGGGCAATTGAGCAGTAGG+TGG - chr4_2:71195301-71195320 Msa0619860:intron 50.0%
GCAGTAGGTGGTGATTACTG+TGG - chr4_2:71195313-71195332 Msa0619860:intron 50.0%
GATGTGGTTATACTGCCAGC+AGG + chr4_2:71195341-71195360 None:intergenic 50.0%
GCAAAGTCATACAGTGTGGC+TGG - chr4_2:71195442-71195461 Msa0619860:intron 50.0%
CATACAGTGTGGCTGGAAAG+AGG - chr4_2:71195449-71195468 Msa0619860:intron 50.0%
CATCTTTAGGTCTACAGGCC+TGG + chr4_2:71195791-71195810 None:intergenic 50.0%
CAGGCCTGTAGACCTAAAGA+TGG - chr4_2:71195789-71195808 Msa0619860:intron 50.0%
ACATGCATTGGGGATCATGG+AGG - chr4_2:71196181-71196200 Msa0619860:CDS 50.0%
TATCATTGACCGGAGCTGAG+CGG - chr4_2:71196246-71196265 Msa0619860:intron 50.0%
ATTATGTACCCGCTCAGCTC+CGG + chr4_2:71196258-71196277 None:intergenic 50.0%
TACGCAAGGTCCAGCACAAT+CGG + chr4_2:71196542-71196561 None:intergenic 50.0%
AATTGACGGGGGATAGCATG+GGG - chr4_2:71196939-71196958 Msa0619860:five_prime_UTR 50.0%
CGGAAGTGAACTGAACTCGC+CGG - chr4_2:71189566-71189585 Msa0619860:three_prime_UTR 55.0%
ATCGCAGCGGAATTTGACGC+CGG - chr4_2:71189591-71189610 Msa0619860:three_prime_UTR 55.0%
TGCGAAATCGCGTAGGGGAA+GGG + chr4_2:71189657-71189676 None:intergenic 55.0%
TTGCGAAATCGCGTAGGGGA+AGG + chr4_2:71189658-71189677 None:intergenic 55.0%
GCGCAATTGCGAAATCGCGT+AGG + chr4_2:71189664-71189683 None:intergenic 55.0%
CGTATACTTGCCACGACCGT+GGG + chr4_2:71190330-71190349 None:intergenic 55.0%
TCGTATACTTGCCACGACCG+TGG + chr4_2:71190331-71190350 None:intergenic 55.0%
GCAGGTGGTCCAATGGATCT+TGG + chr4_2:71190824-71190843 None:intergenic 55.0%
GCTGATAGCAGGTGGTCCAA+TGG + chr4_2:71190831-71190850 None:intergenic 55.0%
AGTGGTGAGCTGATAGCAGG+TGG + chr4_2:71190839-71190858 None:intergenic 55.0%
GTGGCTCAAGAGCGAGAACA+GGG + chr4_2:71191219-71191238 None:intergenic 55.0%
AGTGGCTCAAGAGCGAGAAC+AGG + chr4_2:71191220-71191239 None:intergenic 55.0%
TCTATTCGGCGGAGAGAGCT+TGG - chr4_2:71191502-71191521 Msa0619860:intron 55.0%
GAGAGCTTGGAGTCATGCCA+TGG - chr4_2:71191515-71191534 Msa0619860:intron 55.0%
GGTTGCGCAAGGCAGTAAAG+TGG - chr4_2:71191595-71191614 Msa0619860:intron 55.0%
GTGCGGTCAAGGCAGATTCT+AGG - chr4_2:71191640-71191659 Msa0619860:intron 55.0%
CCCGCTCACGACACAAAACT+TGG + chr4_2:71192567-71192586 None:intergenic 55.0%
!! TTTGTGTCGTGAGCGGGTTG+AGG - chr4_2:71192570-71192589 Msa0619860:intron 55.0%
GTGTTTGTACCAGGCTGCCA+TGG - chr4_2:71192865-71192884 Msa0619860:intron 55.0%
ACACGTGAGGCAAAGGTGAG+AGG + chr4_2:71193081-71193100 None:intergenic 55.0%
TTTCCTAGGGGCCCTATGAG+AGG + chr4_2:71195283-71195302 None:intergenic 55.0%
TCTCATAGGGCCCCTAGGAA+AGG - chr4_2:71195282-71195301 Msa0619860:intron 55.0%
CTCATAGGGCCCCTAGGAAA+GGG - chr4_2:71195283-71195302 Msa0619860:intron 55.0%
GTGATTACTGTGGTGCCTGC+TGG - chr4_2:71195323-71195342 Msa0619860:intron 55.0%
AGGTCTACAGGCCTGGTTGA+AGG + chr4_2:71195784-71195803 None:intergenic 55.0%
TATCGGGCCTGACAGATCAG+AGG - chr4_2:71195817-71195836 Msa0619860:intron 55.0%
TGGGGATCATGGAGGAGAAG+AGG - chr4_2:71196189-71196208 Msa0619860:CDS 55.0%
ATCATTGACCGGAGCTGAGC+GGG - chr4_2:71196247-71196266 Msa0619860:intron 55.0%
CAATTGCCTGGAAAGCTGGG+GGG + chr4_2:71196511-71196530 None:intergenic 55.0%
GCAATTGCCTGGAAAGCTGG+GGG + chr4_2:71196512-71196531 None:intergenic 55.0%
GGCAATTGCCTGGAAAGCTG+GGG + chr4_2:71196513-71196532 None:intergenic 55.0%
GGGCAATTGCCTGGAAAGCT+GGG + chr4_2:71196514-71196533 None:intergenic 55.0%
GTCCAGCACAATCGGGTTAC+GGG + chr4_2:71196534-71196553 None:intergenic 55.0%
GGTCCAGCACAATCGGGTTA+CGG + chr4_2:71196535-71196554 None:intergenic 55.0%
ACGCAAGGTCCAGCACAATC+GGG + chr4_2:71196541-71196560 None:intergenic 55.0%
GAACTCGCCGGAAATCGCAG+CGG - chr4_2:71189578-71189597 Msa0619860:three_prime_UTR 60.0%
AATCGCGTAGGGGAAGGGGA+GGG + chr4_2:71189652-71189671 None:intergenic 60.0%
AAATCGCGTAGGGGAAGGGG+AGG + chr4_2:71189653-71189672 None:intergenic 60.0%
GCGAAATCGCGTAGGGGAAG+GGG + chr4_2:71189656-71189675 None:intergenic 60.0%
AGGGATCAGACCGCTTCCCA+TGG + chr4_2:71190735-71190754 None:intergenic 60.0%
CTCACCACTATCGGGCGACT+CGG - chr4_2:71190850-71190869 Msa0619860:intron 60.0%
TCACCACTATCGGGCGACTC+GGG - chr4_2:71190851-71190870 Msa0619860:intron 60.0%
GGGAGGGTGATAGACAGGAG+TGG + chr4_2:71191037-71191056 None:intergenic 60.0%
TCTCCTCTCATAGGGCCCCT+AGG - chr4_2:71195277-71195296 Msa0619860:intron 60.0%
CGGGCAATTGCCTGGAAAGC+TGG + chr4_2:71196515-71196534 None:intergenic 60.0%
TCGGGTTACGGGCAATTGCC+TGG + chr4_2:71196523-71196542 None:intergenic 60.0%
TGCCCGTAACCCGATTGTGC+TGG - chr4_2:71196529-71196548 Msa0619860:intron 60.0%
ATCGCGTAGGGGAAGGGGAG+GGG + chr4_2:71189651-71189670 None:intergenic 65.0%
TGACCCGAGTCGCCCGATAG+TGG + chr4_2:71190857-71190876 None:intergenic 65.0%
GTACCAGGCTGCCATGGCTG+AGG - chr4_2:71192871-71192890 Msa0619860:intron 65.0%
TTGCCTCAGCCATGGCAGCC+TGG + chr4_2:71192877-71192896 None:intergenic 65.0%
TGGGGGGAAGGGAGCAATGC+GGG + chr4_2:71196495-71196514 None:intergenic 65.0%
CTGGGGGGAAGGGAGCAATG+CGG + chr4_2:71196496-71196515 None:intergenic 65.0%
TCCCTTCCCCCCAGCTTTCC+AGG - chr4_2:71196502-71196521 Msa0619860:intron 65.0%
GCCTGGAAAGCTGGGGGGAA+GGG + chr4_2:71196506-71196525 None:intergenic 65.0%
TGCCTGGAAAGCTGGGGGGA+AGG + chr4_2:71196507-71196526 None:intergenic 65.0%
GTAGGGGAAGGGGAGGGGGA+AGG + chr4_2:71189646-71189665 None:intergenic 70.0%
TCGCGTAGGGGAAGGGGAGG+GGG + chr4_2:71189650-71189669 None:intergenic 70.0%
GGGGGGAAGGGAGCAATGCG+GGG + chr4_2:71196494-71196513 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 71189528 71196991 71189528 ID=Msa0619860;Name=Msa0619860
chr4_2 mRNA 71189528 71196991 71189528 ID=Msa0619860-mRNA-1;Parent=Msa0619860;Name=Msa0619860-mRNA-1;_AED=0.12;_eAED=0.12;_QI=110|1|1|1|0.92|0.85|14|342|603
chr4_2 exon 71189528 71190100 71189528 ID=Msa0619860-mRNA-1:exon:21038;Parent=Msa0619860-mRNA-1
chr4_2 exon 71190251 71190397 71190251 ID=Msa0619860-mRNA-1:exon:21037;Parent=Msa0619860-mRNA-1
chr4_2 exon 71190961 71191090 71190961 ID=Msa0619860-mRNA-1:exon:21036;Parent=Msa0619860-mRNA-1
chr4_2 exon 71191711 71191820 71191711 ID=Msa0619860-mRNA-1:exon:21035;Parent=Msa0619860-mRNA-1
chr4_2 exon 71191962 71192168 71191962 ID=Msa0619860-mRNA-1:exon:21034;Parent=Msa0619860-mRNA-1
chr4_2 exon 71192267 71192394 71192267 ID=Msa0619860-mRNA-1:exon:21033;Parent=Msa0619860-mRNA-1
chr4_2 exon 71193530 71193641 71193530 ID=Msa0619860-mRNA-1:exon:21032;Parent=Msa0619860-mRNA-1
chr4_2 exon 71193802 71193997 71193802 ID=Msa0619860-mRNA-1:exon:21031;Parent=Msa0619860-mRNA-1
chr4_2 exon 71194231 71194316 71194231 ID=Msa0619860-mRNA-1:exon:21030;Parent=Msa0619860-mRNA-1
chr4_2 exon 71194839 71195034 71194839 ID=Msa0619860-mRNA-1:exon:21029;Parent=Msa0619860-mRNA-1
chr4_2 exon 71196132 71196242 71196132 ID=Msa0619860-mRNA-1:exon:21028;Parent=Msa0619860-mRNA-1
chr4_2 exon 71196378 71196444 71196378 ID=Msa0619860-mRNA-1:exon:21027;Parent=Msa0619860-mRNA-1
chr4_2 exon 71196574 71196669 71196574 ID=Msa0619860-mRNA-1:exon:21026;Parent=Msa0619860-mRNA-1
chr4_2 exon 71196887 71196991 71196887 ID=Msa0619860-mRNA-1:exon:21025;Parent=Msa0619860-mRNA-1
chr4_2 five_prime_UTR 71196887 71196991 71196887 ID=Msa0619860-mRNA-1:five_prime_utr;Parent=Msa0619860-mRNA-1
chr4_2 five_prime_UTR 71196665 71196669 71196665 ID=Msa0619860-mRNA-1:five_prime_utr;Parent=Msa0619860-mRNA-1
chr4_2 CDS 71196574 71196664 71196574 ID=Msa0619860-mRNA-1:cds;Parent=Msa0619860-mRNA-1
chr4_2 CDS 71196378 71196444 71196378 ID=Msa0619860-mRNA-1:cds;Parent=Msa0619860-mRNA-1
chr4_2 CDS 71196132 71196242 71196132 ID=Msa0619860-mRNA-1:cds;Parent=Msa0619860-mRNA-1
chr4_2 CDS 71194839 71195034 71194839 ID=Msa0619860-mRNA-1:cds;Parent=Msa0619860-mRNA-1
chr4_2 CDS 71194231 71194316 71194231 ID=Msa0619860-mRNA-1:cds;Parent=Msa0619860-mRNA-1
chr4_2 CDS 71193802 71193997 71193802 ID=Msa0619860-mRNA-1:cds;Parent=Msa0619860-mRNA-1
chr4_2 CDS 71193530 71193641 71193530 ID=Msa0619860-mRNA-1:cds;Parent=Msa0619860-mRNA-1
chr4_2 CDS 71192267 71192394 71192267 ID=Msa0619860-mRNA-1:cds;Parent=Msa0619860-mRNA-1
chr4_2 CDS 71191962 71192168 71191962 ID=Msa0619860-mRNA-1:cds;Parent=Msa0619860-mRNA-1
chr4_2 CDS 71191711 71191820 71191711 ID=Msa0619860-mRNA-1:cds;Parent=Msa0619860-mRNA-1
chr4_2 CDS 71190961 71191090 71190961 ID=Msa0619860-mRNA-1:cds;Parent=Msa0619860-mRNA-1
chr4_2 CDS 71190251 71190397 71190251 ID=Msa0619860-mRNA-1:cds;Parent=Msa0619860-mRNA-1
chr4_2 CDS 71189870 71190100 71189870 ID=Msa0619860-mRNA-1:cds;Parent=Msa0619860-mRNA-1
chr4_2 three_prime_UTR 71189528 71189869 71189528 ID=Msa0619860-mRNA-1:three_prime_utr;Parent=Msa0619860-mRNA-1
Gene Sequence

>Msa0619860

ATGGGAAAAGAGAATCAATCATCTGCCATGGAAGTCGATGATCCGAAATCAACCAATTCTGATCAGATTGTTCCCAAATTCTCAATCACTGTTCTGCAGCTGTTAAAATCAGCACAAATGCAGCATGGTTTGCGTCACGGAGATTACACTCGCTATCGGAGGTATTGTACAGCCCGATTGAGGAGGTTGTATAAATCTTTGAAGTTTACCCACGGTCGTGGCAAGTATACGAAAAGAACCTTAACTGAGTCTAATGTCACTGAAGTAAGGTTTCTTCATGTGATTCTCTATTCGGCGGAGAGAGCTTGGAGTCATGCCATGGAGAAAAGGCAGCTTCCAAATGGACCAAATGCATCTCAACGAATCTATCTGATTGGTAGGTTGCGCAAGGCAGTAAAGTGGGCTACTTTGTTTTCACAATTTTGTGCGGTCAAGGCAGATTCTAGGACATCTTTGGAAGCTGAGGCTTACGAGTCCTATATGAAGGGGAGTTTGTTGTTTGAGCAAGATCAGAACTGGGATGTGGCTTTAAAGCACTTCAAAAGTGCTAGGGCTGTATACGAGGAGTTAGGGAAATATGGAGATTTGGATAACCAAGTTTTGTGTCGTGAGCGGGTTGAGGAACTAGAACCTAGTATCAGATACTGCCTTCACAAAATTGGCCAGTCAAATCTACAAGCCTCTGAACTACTAAACATTGGCGATATGGAAGGACCTGCATTAGACCTTTTTAAAGCTAAACTAGAGGCTGCCATGGCTGAGGCAAGATCTCAACAAGCTGCTTCCATGACAGAATTTCATTGGCTTGGCCATAGATTTCCAATATCAAATGCCAAAACAAGGGTTGCCATTTTGAAAGCCCAGGAGCTGGAGAAAGATATCCATGGTCCCTTGGCAGAAAATATTTCAGCGGACAAAAGACTGGTTATTTTTGACAAAATCTTTTCTGCATACCATGATGCTAGAGGCTGTATTCGGGCTGATTTGGCCACTGCAGGAAATGCAGAAAGTGTGAAAGATGATTTGAATGGTCTTGATAAGGCTGTCAGTGCTGTCTTAGGAGAAAGAACCATTGAGCGCAACCTTTTGTTGGTCAGGGTTGCAAAAAGTAAACTTGCAAAGCGTAATGATGATAAAAATGAAAAACTCACCAAACCTGAAGAGCTTGTTCGCTTATATGATCTCTTGCTACAGAATACATCTGATCTATCTGATTTAGTCAGTTCTGGAAGGGACCAAAAGCCAGAAGAAGTTAGCTTTGCTGAAGAGTGTTCATGCAAAAGTTTGGCTTTTCGAGCAGAAAGGTGCTTTTATGTTGCAAAGTCATACAGTGTGGCTGGAAAGAGGGCTGAAGCATATGCTTTGTACTGTCGTGCTCGCAGTTTAGCTGAAGATGCCTTAGGAAAGCTTCAAATGTTAGATGGCAATAGTAAGACTATGGTGAAAGAATTAGAGGTCTTGTGCAATGAATGCCGTTCTAACAGTTGTATAGAACATGCATTGGGGATCATGGAGGAGAAGAGGACTCAAGAGAATATCTCCGAAGGGATCTCCAATATATCATTGACCGGAGCTGAGCGGTTGGAGAAATTCCTATTGGAGAAACTTGATGTTTATGAGTCTGCTGTGGGTGATTCAAACGTGAAATCTGCACCCCGCATTGCTCCCTTCCCCCCAGCTTTCCAGGCAATTGCCCGTAACCCGATTGTGCTGGACCTTGCGTATAACACTATCGAATTCCCAGATATTCAAAATAGGATGAAGAAGGACAAAAGAGCAAAGGGTGGCTTTATAAGCAGAATATTTGGATGA

Protein sequence

>Msa0619860

MGKENQSSAMEVDDPKSTNSDQIVPKFSITVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKSLKFTHGRGKYTKRTLTESNVTEVRFLHVILYSAERAWSHAMEKRQLPNGPNASQRIYLIGRLRKAVKWATLFSQFCAVKADSRTSLEAEAYESYMKGSLLFEQDQNWDVALKHFKSARAVYEELGKYGDLDNQVLCRERVEELEPSIRYCLHKIGQSNLQASELLNIGDMEGPALDLFKAKLEAAMAEARSQQAASMTEFHWLGHRFPISNAKTRVAILKAQELEKDIHGPLAENISADKRLVIFDKIFSAYHDARGCIRADLATAGNAESVKDDLNGLDKAVSAVLGERTIERNLLLVRVAKSKLAKRNDDKNEKLTKPEELVRLYDLLLQNTSDLSDLVSSGRDQKPEEVSFAEECSCKSLAFRAERCFYVAKSYSVAGKRAEAYALYCRARSLAEDALGKLQMLDGNSKTMVKELEVLCNECRSNSCIEHALGIMEEKRTQENISEGISNISLTGAERLEKFLLEKLDVYESAVGDSNVKSAPRIAPFPPAFQAIARNPIVLDLAYNTIEFPDIQNRMKKDKRAKGGFISRIFG*