Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1228810 | KEH17865.1 | 63.684 | 190 | 9 | 3 | 1 | 135 | 1 | 185 | 3.33e-51 | 178 |
| Msa1228810 | KEH17865.1 | 88.205 | 195 | 15 | 1 | 135 | 329 | 1 | 187 | 8.29e-105 | 315 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1228810 | sp|Q41001|BCP_PEA | 52.800 | 125 | 53 | 4 | 133 | 254 | 1 | 122 | 9.47e-33 | 123 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1228810 | A0A072TWJ3 | 63.684 | 190 | 9 | 3 | 1 | 135 | 1 | 185 | 1.59e-51 | 178 |
| Msa1228810 | A0A072TWJ3 | 88.205 | 195 | 15 | 1 | 135 | 329 | 1 | 187 | 3.96e-105 | 315 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0076640 | Msa1228810 | 0.803461 | 3.448004e-49 | -8.615850e-47 |
| Msa0083890 | Msa1228810 | 0.809599 | 1.747317e-50 | -8.615850e-47 |
| Msa0615200 | Msa1228810 | 0.801712 | 7.910740e-49 | -8.615850e-47 |
| Msa0816630 | Msa1228810 | 0.811086 | 8.345827e-51 | -8.615850e-47 |
| Msa0826380 | Msa1228810 | 0.815384 | 9.504168e-52 | -8.615850e-47 |
| Msa0826450 | Msa1228810 | 0.810588 | 1.069593e-50 | -8.615850e-47 |
| Msa0162680 | Msa1228810 | 0.801595 | 8.360000e-49 | -8.615850e-47 |
| Msa1227710 | Msa1228810 | 0.809226 | 2.101260e-50 | -8.615850e-47 |
| Msa1228810 | Msa1309040 | 0.818099 | 2.339438e-52 | -8.615850e-47 |
| Msa1228810 | Msa1309050 | 0.876703 | 1.130868e-68 | -8.615850e-47 |
| Msa1228810 | Msa1344330 | 0.835669 | 1.467067e-56 | -8.615850e-47 |
| Msa1228810 | Msa1422230 | 0.800248 | 1.575776e-48 | -8.615850e-47 |
| Msa1228810 | Msa1453600 | 0.815202 | 1.042954e-51 | -8.615850e-47 |
| Msa0385320 | Msa1228810 | 0.827546 | 1.473564e-54 | -8.615850e-47 |
| Msa0393100 | Msa1228810 | 0.812268 | 4.616885e-51 | -8.615850e-47 |
| Msa0402800 | Msa1228810 | 0.818246 | 2.166621e-52 | -8.615850e-47 |
| Msa0449620 | Msa1228810 | 0.815697 | 8.094582e-52 | -8.615850e-47 |
| Msa0481770 | Msa1228810 | 0.817938 | 2.543479e-52 | -8.615850e-47 |
| Msa1183750 | Msa1228810 | 0.912221 | 2.496727e-83 | -8.615850e-47 |
| Msa0488580 | Msa1228810 | 0.814889 | 1.224273e-51 | -8.615850e-47 |
| Msa0497860 | Msa1228810 | 0.820808 | 5.639060e-53 | -8.615850e-47 |
| Msa0863940 | Msa1228810 | 0.817235 | 3.663543e-52 | -8.615850e-47 |
| Msa0865810 | Msa1228810 | 0.803911 | 2.780273e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1228810 | MtrunA17_Chr8g0335531 | 88.205 | 195 | 15 | 1 | 135 | 329 | 1 | 187 | 7.63e-109 | 315 |
| Msa1228810 | MtrunA17_Chr8g0335531 | 63.684 | 190 | 9 | 3 | 1 | 135 | 1 | 185 | 3.06e-55 | 178 |
| Msa1228810 | MtrunA17_Chr8g0335571 | 87.940 | 199 | 20 | 1 | 135 | 329 | 1 | 199 | 2.41e-103 | 301 |
| Msa1228810 | MtrunA17_Chr8g0335571 | 62.437 | 197 | 12 | 3 | 1 | 135 | 1 | 197 | 1.18e-44 | 151 |
| Msa1228810 | MtrunA17_Chr3g0132441 | 57.265 | 117 | 46 | 3 | 139 | 254 | 7 | 120 | 3.67e-35 | 126 |
| Msa1228810 | MtrunA17_Chr3g0132431 | 47.552 | 143 | 67 | 4 | 133 | 270 | 1 | 140 | 7.50e-33 | 120 |
| Msa1228810 | MtrunA17_Chr3g0132411 | 49.231 | 130 | 62 | 3 | 136 | 264 | 43 | 169 | 1.69e-31 | 116 |
| Msa1228810 | MtrunA17_Chr3g0132511 | 51.261 | 119 | 54 | 4 | 138 | 254 | 6 | 122 | 1.81e-29 | 112 |
| Msa1228810 | MtrunA17_Chr2g0323021 | 38.065 | 155 | 92 | 3 | 133 | 286 | 1 | 152 | 4.96e-29 | 111 |
| Msa1228810 | MtrunA17_Chr5g0394321 | 35.152 | 165 | 96 | 4 | 133 | 294 | 1 | 157 | 2.10e-28 | 108 |
| Msa1228810 | MtrunA17_Chr1g0205701 | 34.211 | 152 | 95 | 3 | 145 | 293 | 12 | 161 | 7.26e-27 | 104 |
| Msa1228810 | MtrunA17_Chr3g0132701 | 46.377 | 138 | 58 | 5 | 138 | 261 | 6 | 141 | 2.58e-25 | 101 |
| Msa1228810 | MtrunA17_Chr1g0196801 | 37.037 | 135 | 82 | 2 | 155 | 289 | 20 | 151 | 6.40e-25 | 99.4 |
| Msa1228810 | MtrunA17_Chr6g0481491 | 40.164 | 122 | 68 | 2 | 140 | 258 | 7 | 126 | 1.99e-22 | 93.2 |
| Msa1228810 | MtrunA17_Chr6g0459441 | 46.602 | 103 | 52 | 2 | 153 | 254 | 21 | 121 | 7.38e-22 | 90.9 |
| Msa1228810 | MtrunA17_Chr1g0211101 | 36.306 | 157 | 90 | 6 | 136 | 286 | 9 | 161 | 1.48e-21 | 90.1 |
| Msa1228810 | MtrunA17_Chr4g0064041 | 43.284 | 134 | 64 | 5 | 144 | 267 | 10 | 141 | 3.58e-21 | 92.8 |
| Msa1228810 | MtrunA17_Chr4g0064041 | 46.078 | 102 | 48 | 3 | 158 | 254 | 191 | 290 | 1.21e-20 | 91.3 |
| Msa1228810 | MtrunA17_Chr7g0253641 | 40.336 | 119 | 63 | 3 | 138 | 255 | 11 | 122 | 1.75e-20 | 88.6 |
| Msa1228810 | MtrunA17_Chr2g0301431 | 41.667 | 120 | 62 | 5 | 137 | 253 | 9 | 123 | 1.54e-19 | 83.2 |
| Msa1228810 | MtrunA17_Chr7g0253681 | 38.655 | 119 | 71 | 2 | 139 | 256 | 8 | 125 | 1.69e-19 | 84.0 |
| Msa1228810 | MtrunA17_Chr7g0253701 | 38.655 | 119 | 70 | 3 | 139 | 256 | 8 | 124 | 6.59e-19 | 82.4 |
| Msa1228810 | MtrunA17_Chr7g0253671 | 38.655 | 119 | 70 | 3 | 139 | 256 | 8 | 124 | 6.59e-19 | 82.4 |
| Msa1228810 | MtrunA17_Chr1g0177341 | 36.937 | 111 | 68 | 2 | 146 | 255 | 13 | 122 | 3.43e-18 | 80.5 |
| Msa1228810 | MtrunA17_Chr1g0177331 | 36.937 | 111 | 68 | 2 | 146 | 255 | 13 | 122 | 3.43e-18 | 80.5 |
| Msa1228810 | MtrunA17_Chr2g0331181 | 36.029 | 136 | 75 | 4 | 155 | 281 | 24 | 156 | 7.80e-18 | 80.1 |
| Msa1228810 | MtrunA17_Chr4g0040291 | 32.934 | 167 | 103 | 3 | 155 | 318 | 22 | 182 | 8.42e-18 | 80.1 |
| Msa1228810 | MtrunA17_Chr7g0253631 | 38.136 | 118 | 65 | 3 | 138 | 254 | 11 | 121 | 2.38e-17 | 80.1 |
| Msa1228810 | MtrunA17_Chr8g0380901 | 36.290 | 124 | 73 | 4 | 131 | 253 | 1 | 119 | 2.90e-17 | 76.6 |
| Msa1228810 | MtrunA17_Chr3g0125761 | 37.500 | 120 | 69 | 4 | 135 | 253 | 10 | 124 | 3.30e-17 | 76.6 |
| Msa1228810 | MtrunA17_Chr8g0360371 | 37.594 | 133 | 72 | 6 | 140 | 264 | 5 | 134 | 4.88e-17 | 80.1 |
| Msa1228810 | MtrunA17_Chr6g0453921 | 35.211 | 142 | 80 | 5 | 144 | 283 | 24 | 155 | 1.15e-16 | 76.6 |
| Msa1228810 | MtrunA17_Chr3g0136871 | 34.722 | 144 | 79 | 4 | 174 | 316 | 48 | 177 | 1.17e-16 | 76.6 |
| Msa1228810 | MtrunA17_Chr6g0453801 | 30.488 | 164 | 105 | 5 | 131 | 287 | 6 | 167 | 2.13e-16 | 75.9 |
| Msa1228810 | MtrunA17_Chr1g0150131 | 34.899 | 149 | 88 | 4 | 135 | 276 | 1 | 147 | 2.80e-16 | 75.9 |
| Msa1228810 | MtrunA17_Chr2g0306461 | 37.190 | 121 | 66 | 4 | 144 | 256 | 9 | 127 | 2.88e-16 | 76.3 |
| Msa1228810 | MtrunA17_Chr3g0125791 | 41.346 | 104 | 55 | 4 | 153 | 255 | 28 | 126 | 3.83e-16 | 73.9 |
| Msa1228810 | MtrunA17_Chr6g0483981 | 36.646 | 161 | 92 | 6 | 155 | 308 | 24 | 181 | 4.71e-16 | 79.0 |
| Msa1228810 | MtrunA17_Chr7g0253731 | 32.800 | 125 | 81 | 3 | 133 | 256 | 1 | 123 | 1.04e-15 | 73.6 |
| Msa1228810 | MtrunA17_Chr4g0001571 | 38.614 | 101 | 58 | 3 | 155 | 254 | 26 | 123 | 1.73e-15 | 73.2 |
| Msa1228810 | MtrunA17_Chr2g0324721 | 34.807 | 181 | 95 | 7 | 155 | 318 | 24 | 198 | 2.20e-15 | 73.6 |
| Msa1228810 | MtrunA17_Chr7g0253761 | 35.593 | 118 | 68 | 3 | 138 | 254 | 11 | 121 | 3.15e-15 | 72.8 |
| Msa1228810 | MtrunA17_Chr4g0073901 | 33.607 | 122 | 73 | 4 | 139 | 254 | 10 | 129 | 4.39e-15 | 72.4 |
| Msa1228810 | MtrunA17_Chr4g0033131 | 38.393 | 112 | 58 | 5 | 155 | 258 | 25 | 133 | 4.61e-14 | 69.3 |
| Msa1228810 | MtrunA17_Chr4g0033531 | 38.393 | 112 | 58 | 5 | 155 | 258 | 25 | 133 | 4.61e-14 | 69.3 |
| Msa1228810 | MtrunA17_Chr4g0073921 | 33.600 | 125 | 75 | 4 | 139 | 257 | 10 | 132 | 1.89e-13 | 69.3 |
| Msa1228810 | MtrunA17_Chr4g0041811 | 30.357 | 224 | 124 | 7 | 128 | 325 | 1 | 218 | 2.57e-13 | 68.2 |
| Msa1228810 | MtrunA17_Chr2g0289741 | 33.333 | 126 | 77 | 4 | 159 | 282 | 28 | 148 | 4.76e-13 | 66.6 |
| Msa1228810 | MtrunA17_Chr4g0064031 | 38.144 | 97 | 52 | 5 | 155 | 243 | 25 | 121 | 1.00e-12 | 65.5 |
| Msa1228810 | MtrunA17_Chr8g0387804 | 39.048 | 105 | 56 | 4 | 155 | 254 | 26 | 127 | 1.50e-12 | 63.9 |
| Msa1228810 | MtrunA17_Chr2g0324711 | 31.176 | 170 | 97 | 7 | 139 | 298 | 8 | 167 | 1.74e-12 | 67.4 |
| Msa1228810 | MtrunA17_Chr4g0039721 | 30.714 | 140 | 88 | 3 | 155 | 286 | 29 | 167 | 2.54e-12 | 64.7 |
| Msa1228810 | MtrunA17_Chr8g0380711 | 37.624 | 101 | 56 | 5 | 155 | 253 | 25 | 120 | 4.58e-12 | 62.4 |
| Msa1228810 | MtrunA17_Chr8g0385031 | 33.929 | 168 | 98 | 6 | 139 | 297 | 7 | 170 | 9.29e-12 | 64.7 |
| Msa1228810 | MtrunA17_Chr6g0453791 | 33.594 | 128 | 76 | 5 | 160 | 286 | 33 | 152 | 1.81e-11 | 62.0 |
| Msa1228810 | MtrunA17_Chr2g0317231 | 36.364 | 143 | 78 | 6 | 158 | 292 | 25 | 162 | 4.24e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1228810 | AT2G44790.1 | 53.704 | 108 | 46 | 1 | 151 | 258 | 25 | 128 | 1.30e-33 | 123 |
| Msa1228810 | AT3G60270.1 | 52.336 | 107 | 49 | 1 | 151 | 257 | 19 | 123 | 8.45e-33 | 120 |
| Msa1228810 | AT3G60280.1 | 53.271 | 107 | 48 | 1 | 151 | 257 | 17 | 121 | 2.63e-32 | 120 |
| Msa1228810 | AT2G32300.1 | 50.847 | 118 | 51 | 3 | 155 | 267 | 23 | 138 | 1.81e-31 | 119 |
| Msa1228810 | AT2G32300.2 | 45.270 | 148 | 68 | 4 | 155 | 301 | 53 | 188 | 5.09e-31 | 119 |
| Msa1228810 | AT1G72230.1 | 45.513 | 156 | 77 | 4 | 136 | 287 | 3 | 154 | 4.90e-30 | 113 |
| Msa1228810 | AT3G27200.1 | 41.129 | 124 | 70 | 2 | 133 | 255 | 1 | 122 | 1.85e-26 | 103 |
| Msa1228810 | AT5G07475.1 | 38.514 | 148 | 84 | 2 | 137 | 279 | 4 | 149 | 9.55e-26 | 102 |
| Msa1228810 | AT2G31050.1 | 40.278 | 144 | 81 | 4 | 131 | 271 | 1 | 142 | 3.27e-25 | 100 |
| Msa1228810 | AT2G26720.1 | 39.706 | 136 | 73 | 4 | 143 | 271 | 9 | 142 | 5.57e-24 | 97.8 |
| Msa1228810 | AT1G22480.1 | 47.154 | 123 | 63 | 1 | 166 | 288 | 27 | 147 | 6.91e-24 | 96.7 |
| Msa1228810 | AT5G26330.1 | 36.290 | 124 | 74 | 3 | 135 | 255 | 1 | 122 | 1.12e-22 | 94.0 |
| Msa1228810 | AT5G53870.2 | 33.871 | 186 | 106 | 7 | 119 | 300 | 1 | 173 | 1.84e-19 | 88.2 |
| Msa1228810 | AT3G17675.1 | 37.778 | 135 | 74 | 4 | 121 | 254 | 2 | 127 | 2.48e-19 | 83.2 |
| Msa1228810 | AT5G53870.1 | 33.871 | 186 | 106 | 7 | 119 | 300 | 1 | 173 | 2.97e-19 | 87.8 |
| Msa1228810 | AT2G25060.1 | 38.636 | 132 | 70 | 5 | 142 | 264 | 15 | 144 | 3.48e-18 | 81.3 |
| Msa1228810 | AT5G20230.1 | 36.364 | 176 | 98 | 7 | 157 | 324 | 24 | 193 | 1.16e-17 | 80.5 |
| Msa1228810 | AT4G31840.1 | 31.606 | 193 | 104 | 8 | 136 | 319 | 3 | 176 | 1.15e-16 | 77.0 |
| Msa1228810 | AT5G15350.1 | 34.483 | 145 | 72 | 5 | 140 | 272 | 1 | 134 | 1.71e-16 | 76.6 |
| Msa1228810 | AT1G79800.1 | 36.585 | 123 | 70 | 3 | 156 | 273 | 32 | 151 | 3.47e-16 | 76.3 |
| Msa1228810 | AT2G02850.1 | 39.286 | 112 | 62 | 4 | 145 | 255 | 23 | 129 | 5.05e-16 | 73.9 |
| Msa1228810 | AT4G12880.1 | 37.500 | 128 | 69 | 6 | 135 | 254 | 1 | 125 | 8.53e-16 | 73.6 |
| Msa1228810 | AT4G28365.1 | 31.818 | 176 | 108 | 7 | 131 | 298 | 1 | 172 | 1.25e-15 | 74.7 |
| Msa1228810 | AT4G27520.1 | 35.246 | 122 | 70 | 4 | 143 | 257 | 12 | 131 | 1.81e-15 | 76.6 |
| Msa1228810 | AT4G30590.1 | 44.578 | 83 | 43 | 2 | 175 | 256 | 50 | 130 | 5.17e-15 | 72.8 |
| Msa1228810 | AT1G64640.1 | 36.111 | 108 | 65 | 2 | 155 | 258 | 30 | 137 | 1.52e-14 | 71.6 |
| Msa1228810 | AT5G57920.1 | 33.333 | 99 | 63 | 2 | 173 | 270 | 43 | 139 | 3.16e-14 | 70.5 |
| Msa1228810 | AT5G57920.3 | 33.333 | 99 | 63 | 2 | 173 | 270 | 75 | 171 | 4.32e-14 | 70.9 |
| Msa1228810 | AT3G20570.1 | 33.333 | 132 | 80 | 4 | 131 | 256 | 1 | 130 | 5.25e-14 | 70.5 |
| Msa1228810 | AT5G57920.2 | 33.333 | 99 | 63 | 2 | 173 | 270 | 42 | 138 | 6.25e-14 | 69.7 |
| Msa1228810 | AT3G53330.1 | 34.400 | 125 | 76 | 4 | 154 | 274 | 184 | 306 | 1.35e-12 | 67.8 |
| Msa1228810 | AT1G48940.1 | 32.283 | 127 | 77 | 4 | 133 | 252 | 1 | 125 | 1.30e-11 | 62.8 |
| Msa1228810 | AT2G27035.1 | 31.783 | 129 | 74 | 5 | 161 | 287 | 32 | 148 | 1.54e-11 | 62.4 |
| Msa1228810 | AT3G18590.1 | 33.333 | 123 | 73 | 3 | 139 | 255 | 8 | 127 | 7.49e-11 | 60.8 |
Find 76 sgRNAs with CRISPR-Local
Find 425 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGTTTCAGCAATGATTT+TGG | 0.095923 | 8_2:+4324808 | Msa1228810:CDS |
| CTTTGTTTCAGCAATGATTT+TGG | 0.095923 | 8_2:+4332008 | Msa1228810:CDS |
| TCCATCAGCATAGTTCTTTA+TGG | 0.149502 | 8_2:-4331692 | None:intergenic |
| CACCATAATTTATGTACTAT+TGG | 0.264888 | 8_2:+4332069 | Msa1228810:three_prime_UTR |
| AACCAATAGTACATAAATTA+TGG | 0.310625 | 8_2:-4332071 | None:intergenic |
| GGAGGGTACCACTTGGAGTT+GGG | 0.317043 | 8_2:-4324643 | None:intergenic |
| GATTACACCAAATGGGCTTC+TGG | 0.335655 | 8_2:+4331332 | Msa1228810:CDS |
| CCATCACCACCAAAGGATAA+TGG | 0.368895 | 8_2:+4324740 | Msa1228810:CDS |
| CCATCACCACCAAAGGATAA+TGG | 0.368895 | 8_2:+4331940 | Msa1228810:CDS |
| GAGGGTACCACTTGGAGTTG+GGG | 0.373322 | 8_2:-4324642 | None:intergenic |
| CTATGCTGATGGAAATTCTA+AGG | 0.389114 | 8_2:+4331702 | Msa1228810:CDS |
| ACTCCATCAACAACTCCTTC+AGG | 0.392365 | 8_2:+4324701 | Msa1228810:CDS |
| CACTCAAATAAGAATTTACT+AGG | 0.396468 | 8_2:+4332250 | Msa1228810:three_prime_UTR |
| GTCCCTGAAGGAGTTGTTGA+TGG | 0.397137 | 8_2:-4324704 | None:intergenic |
| GGGAGGGTACCACTTGGAGT+TGG | 0.413393 | 8_2:-4324644 | None:intergenic |
| CCATTATCCTTTGGTGGTGA+TGG | 0.426718 | 8_2:-4324740 | None:intergenic |
| CCATTATCCTTTGGTGGTGA+TGG | 0.426718 | 8_2:-4331940 | None:intergenic |
| AAGGAGTTGATTACACCAAA+TGG | 0.428315 | 8_2:+4331324 | Msa1228810:CDS |
| TTGGTTGCGAATAATTGAAA+TGG | 0.433690 | 8_2:+4332212 | Msa1228810:three_prime_UTR |
| GGAGCTGATGGTGTGGTTGA+TGG | 0.434928 | 8_2:-4331895 | None:intergenic |
| GTTGTTGATGGAGTAGTTGA+TGG | 0.440380 | 8_2:-4324692 | None:intergenic |
| GGTGCCACTTGGAGTTGGGG+TGG | 0.440747 | 8_2:-4331830 | None:intergenic |
| CTAACAGCTCCATTATCCTT+TGG | 0.447592 | 8_2:-4324749 | None:intergenic |
| CTAACAGCTCCATTATCCTT+TGG | 0.447592 | 8_2:-4331949 | None:intergenic |
| TTCAAAGTTGGTGATAACTT+AGG | 0.466246 | 8_2:+4331362 | Msa1228810:CDS |
| GTAGTTGATGGTGTGGTTGA+TGG | 0.466465 | 8_2:-4331871 | None:intergenic |
| GTGGTTGATGGAGTAGTTGA+TGG | 0.471972 | 8_2:-4331883 | None:intergenic |
| AAGGTTGCATTGACTAAAGC+AGG | 0.472415 | 8_2:+4331721 | Msa1228810:CDS |
| AAATCAGTTGCAAATGCATA+AGG | 0.473584 | 8_2:-4324083 | None:intergenic |
| AAATCAGTTGCAAATGCATA+AGG | 0.473584 | 8_2:-4331272 | None:intergenic |
| ATTCGCAACCAAACAACAAA+AGG | 0.479236 | 8_2:-4332201 | None:intergenic |
| CATCAACTTCATTCACTTGG+TGG | 0.484952 | 8_2:-4324445 | None:intergenic |
| CTCCATCAACAACTCCTTCA+GGG | 0.489544 | 8_2:+4324702 | Msa1228810:CDS |
| CCAGGTCATTGTACTAGTAC+TGG | 0.496658 | 8_2:+4324578 | Msa1228810:intron |
| CATCAACTTCATCCACTTGG+TGG | 0.497098 | 8_2:-4331636 | None:intergenic |
| GAAGTTGAGTTTGTCTCTGA+AGG | 0.503772 | 8_2:-4331916 | None:intergenic |
| AGGAGTTGATTACACCAAAT+GGG | 0.504844 | 8_2:+4331325 | Msa1228810:CDS |
| TACTTCATATGCCCTACTCC+AGG | 0.512113 | 8_2:+4331751 | Msa1228810:CDS |
| AACTCCTTGATTCCATCCAC+TGG | 0.514824 | 8_2:-4331309 | None:intergenic |
| CCAGGTCATTGTACGAGTAC+TGG | 0.520066 | 8_2:+4331769 | Msa1228810:CDS |
| TTTGCAACTGATTTCACTGT+TGG | 0.522709 | 8_2:+4324092 | Msa1228810:CDS |
| TTTGCAACTGATTTCACTGT+TGG | 0.522709 | 8_2:+4331281 | Msa1228810:CDS |
| GAAGTTGAGTTTGTCCCTGA+AGG | 0.522749 | 8_2:-4324716 | None:intergenic |
| ACAGCTCCATTATCCTTTGG+TGG | 0.526576 | 8_2:-4324746 | None:intergenic |
| ACAGCTCCATTATCCTTTGG+TGG | 0.526576 | 8_2:-4331946 | None:intergenic |
| AACTTCATTCACTTGGTGGA+AGG | 0.528629 | 8_2:-4324441 | None:intergenic |
| TTTGTCTCTGAAGGAGCTGA+TGG | 0.541698 | 8_2:-4331907 | None:intergenic |
| CAACAAAAGACTAACACCAT+TGG | 0.542170 | 8_2:-4331977 | None:intergenic |
| CATCAAAAGACTAACACCAT+TGG | 0.545497 | 8_2:-4324777 | None:intergenic |
| GTTGGTGGGAGGGTACCACT+TGG | 0.547023 | 8_2:-4324650 | None:intergenic |
| CTCTGAAGGAGCTGATGGTG+TGG | 0.549422 | 8_2:-4331902 | None:intergenic |
| TTTCATCAACTTCATTCACT+TGG | 0.552459 | 8_2:-4324448 | None:intergenic |
| GTGAATGAAGTTGATGAAAG+TGG | 0.554625 | 8_2:+4324452 | Msa1228810:CDS |
| TTCACTGTTGGTGATGCCAG+TGG | 0.555149 | 8_2:+4331293 | Msa1228810:CDS |
| GCCATAAAGAACTATGCTGA+TGG | 0.555563 | 8_2:+4331691 | Msa1228810:CDS |
| TTTCATCAACTTCATCCACT+TGG | 0.560272 | 8_2:-4331639 | None:intergenic |
| AACTTCATCCACTTGGTGGA+AGG | 0.561488 | 8_2:-4331632 | None:intergenic |
| AACTTCTCCATCACCACCAA+AGG | 0.566009 | 8_2:+4324733 | Msa1228810:CDS |
| AACTTCTCCATCACCACCAA+AGG | 0.566009 | 8_2:+4331933 | Msa1228810:CDS |
| CCAGTACTCGTACAATGACC+TGG | 0.574681 | 8_2:-4331769 | None:intergenic |
| TGATGGAGTAGTTGATGGTG+TGG | 0.574696 | 8_2:-4331878 | None:intergenic |
| GATGCCAGTGGATGGAATCA+AGG | 0.575971 | 8_2:+4331305 | Msa1228810:CDS |
| CTCGTACAATGACCTGGAGT+AGG | 0.590627 | 8_2:-4331763 | None:intergenic |
| CTGTTGGTGATGCCAGTGGA+TGG | 0.591217 | 8_2:+4331297 | Msa1228810:CDS |
| TCGTACAATGACCTGGAGTA+GGG | 0.606340 | 8_2:-4331762 | None:intergenic |
| GGTACCACTTGGAGTTGGGG+TGG | 0.609780 | 8_2:-4324639 | None:intergenic |
| GTAGTTGATGGAGTGCCACT+TGG | 0.611661 | 8_2:-4324680 | None:intergenic |
| AGCACCACCCCAACTCCAAG+TGG | 0.615986 | 8_2:+4331826 | Msa1228810:CDS |
| AGTTGCAAATGCATAAGGAA+AGG | 0.617334 | 8_2:-4331267 | None:intergenic |
| ATATGGCTCCTTCCACCAAG+TGG | 0.625567 | 8_2:+4331624 | Msa1228810:CDS |
| AGCACCACCCCAACTCCAAG+TGG | 0.637196 | 8_2:+4324635 | Msa1228810:CDS |
| GGTCATTGTACTAGTACTGG+TGG | 0.645353 | 8_2:+4324581 | Msa1228810:intron |
| GGAGCTGTTAGTGTTTCCAA+TGG | 0.664368 | 8_2:+4324761 | Msa1228810:CDS |
| GGAGCTGTTAGTGTTTCCAA+TGG | 0.664368 | 8_2:+4331961 | Msa1228810:CDS |
| GCAACCAAACAACAAAAGGA+CGG | 0.665554 | 8_2:-4332197 | None:intergenic |
| CCACCAACAAAATCTCCAAG+TGG | 0.679349 | 8_2:+4324665 | Msa1228810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+TGG | - | chr8_2:4329710-4329729 | None:intergenic | 0.0% |
| !!! | TTTTATTTTTTTTATAAGCA+AGG | + | chr8_2:4324217-4324236 | Msa1228810:intron | 10.0% |
| !!! | AAGTCAATTATTTAATTTAT+TGG | - | chr8_2:4330084-4330103 | None:intergenic | 10.0% |
| !!! | TGTATATTTTTATTTTAGTA+CGG | + | chr8_2:4330233-4330252 | Msa1228810:intron | 10.0% |
| !! | AATTAAATTTAAATTCAACA+TGG | + | chr8_2:4331024-4331043 | Msa1228810:intron | 10.0% |
| !!! | ATATTATGTTTTTTCTTATT+TGG | + | chr8_2:4331452-4331471 | Msa1228810:intron | 10.0% |
| !!! | ATGTTTTCTTTTTTAATTAA+AGG | - | chr8_2:4332140-4332159 | None:intergenic | 10.0% |
| !!! | TTGATCTCTTTTTTAATTAA+AGG | - | chr8_2:4324963-4324982 | None:intergenic | 15.0% |
| !! | TGCATAATTAAATGAAAATT+TGG | + | chr8_2:4327167-4327186 | Msa1228810:intron | 15.0% |
| !! | GCATAATTAAATGAAAATTT+GGG | + | chr8_2:4327168-4327187 | Msa1228810:intron | 15.0% |
| !! | TCTCTTAAAACAATTATATT+GGG | - | chr8_2:4327580-4327599 | None:intergenic | 15.0% |
| !! | ATCTCTTAAAACAATTATAT+TGG | - | chr8_2:4327581-4327600 | None:intergenic | 15.0% |
| !! | AAATAACTGAAATATAAACT+TGG | - | chr8_2:4327920-4327939 | None:intergenic | 15.0% |
| !! | TATTCAAGTAATCTTAATAA+TGG | - | chr8_2:4328853-4328872 | None:intergenic | 15.0% |
| !!! | CATTTTGAATTTTGATTATA+AGG | + | chr8_2:4329177-4329196 | Msa1228810:intron | 15.0% |
| !! | TAACATCTTTGATTATTTAT+CGG | - | chr8_2:4329449-4329468 | None:intergenic | 15.0% |
| !!! | TTATTTTGCATTTATGATAA+TGG | + | chr8_2:4330357-4330376 | Msa1228810:intron | 15.0% |
| !!! | TAAATATTTTTGTCAAGTAT+CGG | - | chr8_2:4330391-4330410 | None:intergenic | 15.0% |
| !! | AACAATATATAATATATGCA+AGG | + | chr8_2:4330643-4330662 | Msa1228810:intron | 15.0% |
| !!! | TTAAGAAGATTTTTTTTGAT+AGG | - | chr8_2:4330683-4330702 | None:intergenic | 15.0% |
| !! | TATTTCAGTATATAAACAAA+AGG | - | chr8_2:4331429-4331448 | None:intergenic | 15.0% |
| !!! | TATATCAAACTTTTTCAATG+TGG | - | chr8_2:4324308-4324327 | None:intergenic | 20.0% |
| !! | GAAAAAACAGTGTTTAAATA+TGG | + | chr8_2:4324416-4324435 | Msa1228810:intron | 20.0% |
| !! | CATCTTAATTTATGTATTCT+TGG | + | chr8_2:4324869-4324888 | Msa1228810:intron | 20.0% |
| !!! | AAATTCTTCAAAATCTTTTG+AGG | - | chr8_2:4325224-4325243 | None:intergenic | 20.0% |
| !!! | TTTTAAATCCAATTTGAATC+AGG | - | chr8_2:4326369-4326388 | None:intergenic | 20.0% |
| !!! | TAAAAAGACTCTAAAAATAG+TGG | - | chr8_2:4326935-4326954 | None:intergenic | 20.0% |
| !! | ATTTATGTTGTTCTATCTAA+CGG | + | chr8_2:4327637-4327656 | Msa1228810:intron | 20.0% |
| !! | GATAGTGATAATTGAATTAA+CGG | + | chr8_2:4327685-4327704 | Msa1228810:intron | 20.0% |
| !! | ACGAATTAACAAATTAACTT+AGG | - | chr8_2:4327796-4327815 | None:intergenic | 20.0% |
| !!! | ATAATTTTAGAGAAATGACT+AGG | - | chr8_2:4327890-4327909 | None:intergenic | 20.0% |
| !! | TTTAAGAGGTAAGTAAATAA+GGG | - | chr8_2:4327984-4328003 | None:intergenic | 20.0% |
| !! | ATTTAAGAGGTAAGTAAATA+AGG | - | chr8_2:4327985-4328004 | None:intergenic | 20.0% |
| !! | CAATTTCATTAACATTTAAG+AGG | - | chr8_2:4327998-4328017 | None:intergenic | 20.0% |
| !!! | TTGACAAATTTGTTTACTTA+AGG | + | chr8_2:4328540-4328559 | Msa1228810:intron | 20.0% |
| !!! | TGACAAATTTGTTTACTTAA+GGG | + | chr8_2:4328541-4328560 | Msa1228810:intron | 20.0% |
| !! | TTGTTAGGATTATGAATTAA+TGG | + | chr8_2:4328583-4328602 | Msa1228810:intron | 20.0% |
| !! | TGTTAGGATTATGAATTAAT+GGG | + | chr8_2:4328584-4328603 | Msa1228810:intron | 20.0% |
| !!! | TTTATAATTCGTTTTACTTG+TGG | + | chr8_2:4328651-4328670 | Msa1228810:intron | 20.0% |
| !! | GATCAAAAAACAATGATAAA+CGG | + | chr8_2:4329121-4329140 | Msa1228810:intron | 20.0% |
| !!! | ACAAACACTTTATTTTCATA+CGG | + | chr8_2:4329261-4329280 | Msa1228810:intron | 20.0% |
| !! | AAAAAACGTAAAACATATCA+CGG | - | chr8_2:4329287-4329306 | None:intergenic | 20.0% |
| !! | ATTGATCAAAATGAAAATTG+AGG | - | chr8_2:4329328-4329347 | None:intergenic | 20.0% |
| !! | TATATATTTCATGATCTTCT+AGG | + | chr8_2:4329767-4329786 | Msa1228810:intron | 20.0% |
| !!! | GTTATTTTTTGACAAACTTA+CGG | + | chr8_2:4330155-4330174 | Msa1228810:intron | 20.0% |
| !! | GAGAAAAAATAATAATGAAG+TGG | - | chr8_2:4330971-4330990 | None:intergenic | 20.0% |
| !!! | TATTTTTTCTCTCTCTTTTT+TGG | + | chr8_2:4330980-4330999 | Msa1228810:intron | 20.0% |
| !!! | ATTTTTTCTCTCTCTTTTTT+GGG | + | chr8_2:4330981-4331000 | Msa1228810:intron | 20.0% |
| !!! | TTTTGAGAACTAAAGTTTAT+AGG | + | chr8_2:4331200-4331219 | Msa1228810:intron | 20.0% |
| !! | AACCAATAGTACATAAATTA+TGG | - | chr8_2:4332074-4332093 | None:intergenic | 20.0% |
| !!! | GAAAACATTTCTTCTTTTTT+AGG | + | chr8_2:4332152-4332171 | Msa1228810:three_prime_UTR | 20.0% |
| !!! | TTCTTTCTTTGTTTTGTTGT+TGG | + | chr8_2:4324055-4324074 | Msa1228810:CDS | 25.0% |
| !! | TTTGTTTCAGCAATGATTTT+GGG | + | chr8_2:4324809-4324828 | Msa1228810:CDS | 25.0% |
| !! | TCATTTGAGGTACTTATTAT+AGG | + | chr8_2:4325020-4325039 | Msa1228810:intron | 25.0% |
| !!! | ATTAAGATTTTGAGAACTGA+TGG | + | chr8_2:4325177-4325196 | Msa1228810:intron | 25.0% |
| !! | ACTTTTAAATGCTTCACATT+TGG | - | chr8_2:4325484-4325503 | None:intergenic | 25.0% |
| ! | ATTGCTTCTTTGTAATTAAG+TGG | - | chr8_2:4325940-4325959 | None:intergenic | 25.0% |
| ! | TAAAATCCATTTCACATCAA+TGG | - | chr8_2:4326061-4326080 | None:intergenic | 25.0% |
| !!! | TGATGTGAAATGGATTTTAA+AGG | + | chr8_2:4326062-4326081 | Msa1228810:intron | 25.0% |
| !! | TTTCCTTTTACTTCAAATCT+TGG | - | chr8_2:4326262-4326281 | None:intergenic | 25.0% |
| !! | AAGATTTGAAGTAAAAGGAA+AGG | + | chr8_2:4326261-4326280 | Msa1228810:intron | 25.0% |
| ! | CACAACGATATAATTATATG+TGG | + | chr8_2:4326441-4326460 | Msa1228810:intron | 25.0% |
| ! | CTGATTTAGAAAACTTTCTT+AGG | + | chr8_2:4326542-4326561 | Msa1228810:intron | 25.0% |
| !! | TACTATTTGTTGATCCAATA+AGG | + | chr8_2:4327061-4327080 | Msa1228810:intron | 25.0% |
| ! | TCATTAATATGTCACCTTAT+TGG | - | chr8_2:4327078-4327097 | None:intergenic | 25.0% |
| ! | TCATACCTTTATTATTTGCT+AGG | - | chr8_2:4327131-4327150 | None:intergenic | 25.0% |
| ! | TATAAAAGTCACAACACAAA+AGG | + | chr8_2:4327248-4327267 | Msa1228810:intron | 25.0% |
| ! | TCTAGCTAATTTCTTTGATT+AGG | + | chr8_2:4327442-4327461 | Msa1228810:intron | 25.0% |
| !! | AAATAGCCTTTGATGATTAT+AGG | + | chr8_2:4327711-4327730 | Msa1228810:intron | 25.0% |
| ! | TTAAGAGGTAAGTAAATAAG+GGG | - | chr8_2:4327983-4328002 | None:intergenic | 25.0% |
| ! | TAATTTAATTCGTATCCACA+GGG | - | chr8_2:4328042-4328061 | None:intergenic | 25.0% |
| ! | ATAATTTAATTCGTATCCAC+AGG | - | chr8_2:4328043-4328062 | None:intergenic | 25.0% |
| ! | TTGCTAATTATCTATCACAA+TGG | + | chr8_2:4328086-4328105 | Msa1228810:intron | 25.0% |
| ! | TTACTTATCCAATGTGTTAT+AGG | - | chr8_2:4328404-4328423 | None:intergenic | 25.0% |
| ! | TAAGTAAACACATTGAAACT+AGG | + | chr8_2:4328417-4328436 | Msa1228810:intron | 25.0% |
| ! | GTTAGGATTATGAATTAATG+GGG | + | chr8_2:4328585-4328604 | Msa1228810:intron | 25.0% |
| ! | ATGAATTAATGGGGTTTATT+AGG | + | chr8_2:4328594-4328613 | Msa1228810:intron | 25.0% |
| ! | CTAACTCTACTAAATGATTA+TGG | - | chr8_2:4328630-4328649 | None:intergenic | 25.0% |
| !!! | AAAGTGTTAGAAGTTTGTTA+TGG | - | chr8_2:4328770-4328789 | None:intergenic | 25.0% |
| !! | TACAAAATGTTTTCATGAGT+TGG | - | chr8_2:4328913-4328932 | None:intergenic | 25.0% |
| ! | TTAATCCAATTAGTAGTCAT+TGG | - | chr8_2:4328994-4329013 | None:intergenic | 25.0% |
| ! | AAGAAATGTAGAAATGATTG+AGG | + | chr8_2:4329229-4329248 | Msa1228810:intron | 25.0% |
| !!! | TTCATTTTGATCAATTGAGA+TGG | + | chr8_2:4329333-4329352 | Msa1228810:intron | 25.0% |
| ! | TTACCATATGATTAAAACAG+AGG | + | chr8_2:4329486-4329505 | Msa1228810:intron | 25.0% |
| ! | AACATATAACGAACGTATTT+AGG | + | chr8_2:4329552-4329571 | Msa1228810:intron | 25.0% |
| !!! | CTCAATTTTTTCATTTGTCA+TGG | - | chr8_2:4329607-4329626 | None:intergenic | 25.0% |
| !!! | TACGTTTATTTGACTTGTTT+TGG | + | chr8_2:4329861-4329880 | Msa1228810:intron | 25.0% |
| ! | TTTATTGGAATGTTTGTTTC+TGG | - | chr8_2:4330069-4330088 | None:intergenic | 25.0% |
| !! | TTTCACTTATGCATTTTTCT+TGG | + | chr8_2:4330431-4330450 | Msa1228810:intron | 25.0% |
| ! | AAGACTCACTTAATTTAGAA+CGG | + | chr8_2:4330472-4330491 | Msa1228810:intron | 25.0% |
| !!! | TCAAGAGTATCAAAGTAAAT+TGG | + | chr8_2:4330570-4330589 | Msa1228810:intron | 25.0% |
| ! | TATATAATATATGCAAGGTC+CGG | + | chr8_2:4330648-4330667 | Msa1228810:intron | 25.0% |
| !!! | TTTTGATAGGATTTGAAATC+CGG | - | chr8_2:4330670-4330689 | None:intergenic | 25.0% |
| !!! | CTTAAGAAGTGTCAATTTTA+AGG | + | chr8_2:4330698-4330717 | Msa1228810:intron | 25.0% |
| ! | GACTAAAACTTATTATTGGT+GGG | - | chr8_2:4330726-4330745 | None:intergenic | 25.0% |
| ! | TTGTATATTACACATTTACC+AGG | - | chr8_2:4330825-4330844 | None:intergenic | 25.0% |
| ! | ACCATAAAAAAATTGTGACT+TGG | - | chr8_2:4330879-4330898 | None:intergenic | 25.0% |
| ! | TAAAAGAATCTCAATGCATT+AGG | + | chr8_2:4330898-4330917 | Msa1228810:intron | 25.0% |
| !! | ATCTTTCTTTGTTCTTTTGT+TGG | + | chr8_2:4331244-4331263 | Msa1228810:CDS | 25.0% |
| !!! | GTTTGATAATGCTAAATTTG+AGG | + | chr8_2:4331488-4331507 | Msa1228810:intron | 25.0% |
| ! | GAAAAAACAGTGTTCAAATA+TGG | + | chr8_2:4331607-4331626 | Msa1228810:intron | 25.0% |
| !! | TTTGTTTCAGCAATGATTTT+GGG | + | chr8_2:4324809-4324828 | Msa1228810:CDS | 25.0% |
| ! | CACCATAATTTATGTACTAT+TGG | + | chr8_2:4332069-4332088 | Msa1228810:three_prime_UTR | 25.0% |
| ! | CACTCAAATAAGAATTTACT+AGG | + | chr8_2:4332250-4332269 | Msa1228810:three_prime_UTR | 25.0% |
| AAATCAGTTGCAAATGCATA+AGG | - | chr8_2:4324086-4324105 | None:intergenic | 30.0% | |
| ! | AAGGAGTTGATTATACCAAA+TGG | + | chr8_2:4324135-4324154 | Msa1228810:intron | 30.0% |
| ! | AGGAGTTGATTATACCAAAT+GGG | + | chr8_2:4324136-4324155 | Msa1228810:intron | 30.0% |
| TCTGGAAAAACATTCAAAGT+TGG | + | chr8_2:4324161-4324180 | Msa1228810:intron | 30.0% | |
| !! | TTCAAAGTTGGTGATAACTT+AGG | + | chr8_2:4324173-4324192 | Msa1228810:intron | 30.0% |
| !!! | TTTTTTATAAGCAAGGAGAG+AGG | + | chr8_2:4324224-4324243 | Msa1228810:intron | 30.0% |
| TTTCATCAACTTCATTCACT+TGG | - | chr8_2:4324451-4324470 | None:intergenic | 30.0% | |
| !!! | AATGGTGTTAGTCTTTTGAT+GGG | + | chr8_2:4324779-4324798 | Msa1228810:CDS | 30.0% |
| !! | CTTTGTTTCAGCAATGATTT+TGG | + | chr8_2:4324808-4324827 | Msa1228810:CDS | 30.0% |
| ATCATACATTCTGATATACG+TGG | + | chr8_2:4324996-4325015 | Msa1228810:intron | 30.0% | |
| ! | TTTGAGGTACTTATTATAGG+AGG | + | chr8_2:4325023-4325042 | Msa1228810:intron | 30.0% |
| ! | TTGAGGTACTTATTATAGGA+GGG | + | chr8_2:4325024-4325043 | Msa1228810:intron | 30.0% |
| !!! | GAAGAATTTTTTGCTAGAGA+AGG | + | chr8_2:4325235-4325254 | Msa1228810:intron | 30.0% |
| TTCTACTAAGTCATTGTGTT+GGG | - | chr8_2:4325293-4325312 | None:intergenic | 30.0% | |
| TTTCTACTAAGTCATTGTGT+TGG | - | chr8_2:4325294-4325313 | None:intergenic | 30.0% | |
| AACACAATGACTTAGTAGAA+AGG | + | chr8_2:4325293-4325312 | Msa1228810:intron | 30.0% | |
| !! | TTTGTTTTCAGCTTCTTTGT+CGG | - | chr8_2:4325430-4325449 | None:intergenic | 30.0% |
| !! | CAAAAGTATTAGAAGAAGCT+TGG | + | chr8_2:4325446-4325465 | Msa1228810:intron | 30.0% |
| TGATGATAGAAGTGAGAAAA+TGG | + | chr8_2:4325555-4325574 | Msa1228810:intron | 30.0% | |
| ! | AGTGAGAAAATGGTAATGAT+AGG | + | chr8_2:4325565-4325584 | Msa1228810:intron | 30.0% |
| !!! | ATTTGCACCTTTTGAGTTTT+GGG | - | chr8_2:4325625-4325644 | None:intergenic | 30.0% |
| !!! | TATTTGCACCTTTTGAGTTT+TGG | - | chr8_2:4325626-4325645 | None:intergenic | 30.0% |
| TAATTAAGTGGTTCAACATC+AGG | - | chr8_2:4325928-4325947 | None:intergenic | 30.0% | |
| TACAAAGAAGCAATGCAAAT+AGG | + | chr8_2:4325946-4325965 | Msa1228810:intron | 30.0% | |
| AGAAAACCATTGATGTGAAA+TGG | + | chr8_2:4326052-4326071 | Msa1228810:intron | 30.0% | |
| CAATTTCAAAACACAAAGCA+AGG | + | chr8_2:4326106-4326125 | Msa1228810:intron | 30.0% | |
| CATTAGATAGCAGTAAGAAA+TGG | + | chr8_2:4326161-4326180 | Msa1228810:intron | 30.0% | |
| TATGGTATACAAACTGCATA+AGG | + | chr8_2:4326288-4326307 | Msa1228810:intron | 30.0% | |
| AAAAGATGCAAAGCTGAATA+TGG | + | chr8_2:4326385-4326404 | Msa1228810:intron | 30.0% | |
| ATTATATGTGGATGACCTAT+TGG | + | chr8_2:4326453-4326472 | Msa1228810:intron | 30.0% | |
| GATTACTTTCAGTTACCAAT+AGG | - | chr8_2:4326471-4326490 | None:intergenic | 30.0% | |
| ! | ATGCATCATTAGAAGTACAT+TGG | + | chr8_2:4326593-4326612 | Msa1228810:intron | 30.0% |
| TCTAGCCTAGCAAATAATAA+AGG | + | chr8_2:4327123-4327142 | Msa1228810:intron | 30.0% | |
| ! | AGGATATTCATTCACGTTTT+GGG | + | chr8_2:4327271-4327290 | Msa1228810:intron | 30.0% |
| TTGATAAACGTAAGAGTTTC+AGG | - | chr8_2:4327504-4327523 | None:intergenic | 30.0% | |
| TAAGAGGTAAGTAAATAAGG+GGG | - | chr8_2:4327982-4328001 | None:intergenic | 30.0% | |
| TATCTATCACAATGGAGAAA+AGG | + | chr8_2:4328094-4328113 | Msa1228810:intron | 30.0% | |
| CAATAAGATAATGCAGTAGT+TGG | - | chr8_2:4328239-4328258 | None:intergenic | 30.0% | |
| CTAAGAATCCTATAACACAT+TGG | + | chr8_2:4328393-4328412 | Msa1228810:intron | 30.0% | |
| AAACTAGGTTCTATTTCATC+AGG | + | chr8_2:4328432-4328451 | Msa1228810:intron | 30.0% | |
| AACTAGGTTCTATTTCATCA+GGG | + | chr8_2:4328433-4328452 | Msa1228810:intron | 30.0% | |
| TTTGTCAAGCTTCAAAAACT+TGG | - | chr8_2:4328528-4328547 | None:intergenic | 30.0% | |
| ! | ATGTAAAGTATTCGAGCATT+TGG | + | chr8_2:4328966-4328985 | Msa1228810:intron | 30.0% |
| ! | GTTAATTAGAAGCACATGTT+CGG | + | chr8_2:4329075-4329094 | Msa1228810:intron | 30.0% |
| !!! | ATGTTCGGTAGTTTTTTTGT+GGG | + | chr8_2:4329090-4329109 | Msa1228810:intron | 30.0% |
| GTTTACATACATTGAACACT+TGG | + | chr8_2:4329143-4329162 | Msa1228810:intron | 30.0% | |
| ! | ATGTTTCCTTCTTTTTGCTA+CGG | - | chr8_2:4329209-4329228 | None:intergenic | 30.0% |
| !!! | ACTCCTCTGTTTTAATCATA+TGG | - | chr8_2:4329492-4329511 | None:intergenic | 30.0% |
| TTAGGAACAAAAATGTCTGA+AGG | + | chr8_2:4329570-4329589 | Msa1228810:intron | 30.0% | |
| TATTACTATCATCTTACGTG+TGG | - | chr8_2:4329799-4329818 | None:intergenic | 30.0% | |
| CAAATAAACGTAGCCAAAAA+AGG | - | chr8_2:4329853-4329872 | None:intergenic | 30.0% | |
| ! | TTTGAAAGAAGCATATGATG+TGG | - | chr8_2:4329901-4329920 | None:intergenic | 30.0% |
| TGAGTAGTTGAAGACTTTAA+GGG | - | chr8_2:4330120-4330139 | None:intergenic | 30.0% | |
| ATGAGTAGTTGAAGACTTTA+AGG | - | chr8_2:4330121-4330140 | None:intergenic | 30.0% | |
| !!! | TTTTTTGACAAACTTACGGA+AGG | + | chr8_2:4330159-4330178 | Msa1228810:intron | 30.0% |
| ! | TTTTTGACAAACTTACGGAA+GGG | + | chr8_2:4330160-4330179 | Msa1228810:intron | 30.0% |
| GGACTAAAACTTATTATTGG+TGG | - | chr8_2:4330727-4330746 | None:intergenic | 30.0% | |
| ! | TGCGGACTAAAACTTATTAT+TGG | - | chr8_2:4330730-4330749 | None:intergenic | 30.0% |
| !! | TAATAAGTTTTAGTCCGCAT+TGG | + | chr8_2:4330731-4330750 | Msa1228810:intron | 30.0% |
| GGAAAAAAAGTTAACCAATG+CGG | - | chr8_2:4330748-4330767 | None:intergenic | 30.0% | |
| !!! | GCCAAGTCACAATTTTTTTA+TGG | + | chr8_2:4330875-4330894 | Msa1228810:intron | 30.0% |
| TAAATTCAACATGGAGTAGT+TGG | + | chr8_2:4331033-4331052 | Msa1228810:intron | 30.0% | |
| GACATTGACATAGTAAACAA+AGG | + | chr8_2:4331057-4331076 | Msa1228810:intron | 30.0% | |
| AAATCAGTTGCAAATGCATA+AGG | - | chr8_2:4324086-4324105 | None:intergenic | 30.0% | |
| TCTGGAAAAACTTTCAAAGT+TGG | + | chr8_2:4331350-4331369 | Msa1228810:CDS | 30.0% | |
| !! | TTCAAAGTTGGTGATAACTT+AGG | + | chr8_2:4324173-4324192 | Msa1228810:intron | 30.0% |
| TAGGTATGTATACATTCTGA+CGG | + | chr8_2:4331381-4331400 | Msa1228810:intron | 30.0% | |
| TATATAAACAAAAGGCAAGC+AGG | - | chr8_2:4331421-4331440 | None:intergenic | 30.0% | |
| !!! | AATGGTGTTAGTCTTTTGTT+GGG | + | chr8_2:4331979-4331998 | Msa1228810:CDS | 30.0% |
| !! | CTTTGTTTCAGCAATGATTT+TGG | + | chr8_2:4324808-4324827 | Msa1228810:CDS | 30.0% |
| TTGGTTGCGAATAATTGAAA+TGG | + | chr8_2:4332212-4332231 | Msa1228810:three_prime_UTR | 30.0% | |
| ! | TTTGCAACTGATTTCACTGT+TGG | + | chr8_2:4324092-4324111 | Msa1228810:CDS | 35.0% |
| !! | GTGAATGAAGTTGATGAAAG+TGG | + | chr8_2:4324452-4324471 | Msa1228810:CDS | 35.0% |
| ACCATAAAGAGCTATGATGA+TGG | + | chr8_2:4324500-4324519 | Msa1228810:intron | 35.0% | |
| TCCATCATCATAGCTCTTTA+TGG | - | chr8_2:4324504-4324523 | None:intergenic | 35.0% | |
| !! | CTATGATGATGGAGATTCTA+AGG | + | chr8_2:4324511-4324530 | Msa1228810:intron | 35.0% |
| CATCAAAAGACTAACACCAT+TGG | - | chr8_2:4324780-4324799 | None:intergenic | 35.0% | |
| !!! | CAATGGTGTTAGTCTTTTGA+TGG | + | chr8_2:4324778-4324797 | Msa1228810:CDS | 35.0% |
| !!! | AGCAATGATTTTGGGTTTGA+TGG | + | chr8_2:4324817-4324836 | Msa1228810:intron | 35.0% |
| !!! | ATTTTGGGTTTGATGGTCTA+GGG | + | chr8_2:4324824-4324843 | Msa1228810:intron | 35.0% |
| TGATATACGTGGATCATTTG+AGG | + | chr8_2:4325007-4325026 | Msa1228810:intron | 35.0% | |
| ATGAGCATACTAGAATGTTG+TGG | + | chr8_2:4325072-4325091 | Msa1228810:intron | 35.0% | |
| !! | AAGATTTTGAGAACTGATGG+TGG | + | chr8_2:4325180-4325199 | Msa1228810:intron | 35.0% |
| TCTACTAAGTCATTGTGTTG+GGG | - | chr8_2:4325292-4325311 | None:intergenic | 35.0% | |
| ! | TTGTTTTCAGCTTCTTTGTC+GGG | - | chr8_2:4325429-4325448 | None:intergenic | 35.0% |
| GTATTAGAAGAAGCTTGGAA+TGG | + | chr8_2:4325451-4325470 | Msa1228810:intron | 35.0% | |
| GTATGATCCCAAAACTCAAA+AGG | + | chr8_2:4325615-4325634 | Msa1228810:intron | 35.0% | |
| ACGAAAACGAAACACAAAAC+TGG | + | chr8_2:4325665-4325684 | Msa1228810:intron | 35.0% | |
| CGAAAACGAAACACAAAACT+GGG | + | chr8_2:4325666-4325685 | Msa1228810:intron | 35.0% | |
| TTCACTTTGATCTGATTCAG+CGG | - | chr8_2:4325731-4325750 | None:intergenic | 35.0% | |
| !! | GGAACTTGTCTAGTTCTATA+TGG | - | chr8_2:4325826-4325845 | None:intergenic | 35.0% |
| TCACAATCTTCAAGTCAAGT+GGG | - | chr8_2:4325847-4325866 | None:intergenic | 35.0% | |
| TCATCATTCATTGCAGTATC+AGG | - | chr8_2:4325877-4325896 | None:intergenic | 35.0% | |
| GATACTGCAATGAATGATGA+AGG | + | chr8_2:4325877-4325896 | Msa1228810:intron | 35.0% | |
| AAGCAATGCAAATAGGTGTA+TGG | + | chr8_2:4325953-4325972 | Msa1228810:intron | 35.0% | |
| CTATTGAGAAGACTAACATC+TGG | + | chr8_2:4326004-4326023 | Msa1228810:intron | 35.0% | |
| ! | TCAATGGTTTTCTTCTTCTC+TGG | - | chr8_2:4326045-4326064 | None:intergenic | 35.0% |
| ! | CCTTTTACTTCAAATCTTGG+AGG | - | chr8_2:4326259-4326278 | None:intergenic | 35.0% |
| ! | CCTCCAAGATTTGAAGTAAA+AGG | + | chr8_2:4326256-4326275 | Msa1228810:intron | 35.0% |
| ! | AGTAAAAGGAAAGGAGCATA+TGG | + | chr8_2:4326270-4326289 | Msa1228810:intron | 35.0% |
| ! | AAACTGCATAAGGCACTTTA+TGG | + | chr8_2:4326298-4326317 | Msa1228810:intron | 35.0% |
| ATCCAATTTGAATCAGGAAC+TGG | - | chr8_2:4326363-4326382 | None:intergenic | 35.0% | |
| AGTTCAAACACACAATGTAG+TGG | + | chr8_2:4326506-4326525 | Msa1228810:intron | 35.0% | |
| GTTCAAACACACAATGTAGT+GGG | + | chr8_2:4326507-4326526 | Msa1228810:intron | 35.0% | |
| AGCTTAGCATTTGTTTCAGA+AGG | - | chr8_2:4326668-4326687 | None:intergenic | 35.0% | |
| !! | TTCTGAAACAAATGCTAAGC+TGG | + | chr8_2:4326667-4326686 | Msa1228810:intron | 35.0% |
| ACAGAATTCGAACTGATAGT+TGG | + | chr8_2:4326722-4326741 | Msa1228810:intron | 35.0% | |
| ACAGTGAGATGAGATTTCTT+AGG | - | chr8_2:4326824-4326843 | None:intergenic | 35.0% | |
| ! | AGAGTGCTAAGATATGTGAA+AGG | + | chr8_2:4326851-4326870 | Msa1228810:intron | 35.0% |
| ! | TATTTGCTAGGCTAGACAAA+TGG | - | chr8_2:4327119-4327138 | None:intergenic | 35.0% |
| ATTGCCTTCAATTCTTCTCT+CGG | - | chr8_2:4327222-4327241 | None:intergenic | 35.0% | |
| AAAAGTCACAACACAAAAGG+AGG | + | chr8_2:4327251-4327270 | Msa1228810:intron | 35.0% | |
| ! | GAGGATATTCATTCACGTTT+TGG | + | chr8_2:4327270-4327289 | Msa1228810:intron | 35.0% |
| ! | GGATATTCATTCACGTTTTG+GGG | + | chr8_2:4327272-4327291 | Msa1228810:intron | 35.0% |
| CGCATACACAAAGAAATAGA+AGG | + | chr8_2:4327345-4327364 | Msa1228810:intron | 35.0% | |
| ! | ACAAAGAAATAGAAGGCACA+AGG | + | chr8_2:4327352-4327371 | Msa1228810:intron | 35.0% |
| ! | TTCTATCTAACGGACAATCT+AGG | + | chr8_2:4327647-4327666 | Msa1228810:intron | 35.0% |
| ! | TCTATCTAACGGACAATCTA+GGG | + | chr8_2:4327648-4327667 | Msa1228810:intron | 35.0% |
| GGTGAACCTATAATCATCAA+AGG | - | chr8_2:4327720-4327739 | None:intergenic | 35.0% | |
| GATGATTATAGGTTCACCTA+AGG | + | chr8_2:4327722-4327741 | Msa1228810:intron | 35.0% | |
| ATAGGTTCACCTAAGGAATT+AGG | + | chr8_2:4327729-4327748 | Msa1228810:intron | 35.0% | |
| TAGGTTCACCTAAGGAATTA+GGG | + | chr8_2:4327730-4327749 | Msa1228810:intron | 35.0% | |
| TCATAATCCCCTAATTCCTT+AGG | - | chr8_2:4327741-4327760 | None:intergenic | 35.0% | |
| ATGATTAGATGAGAGGACTT+AGG | + | chr8_2:4327757-4327776 | Msa1228810:intron | 35.0% | |
| CATTCGTAGACTTAAGAAAC+AGG | + | chr8_2:4327830-4327849 | Msa1228810:intron | 35.0% | |
| ACCAAAAACCAATTTGCCTA+AGG | + | chr8_2:4327953-4327972 | Msa1228810:intron | 35.0% | |
| TCAACAATGCTGCAATATCA+TGG | + | chr8_2:4328198-4328217 | Msa1228810:intron | 35.0% | |
| TCAAGCAATTTGACTGGATA+CGG | + | chr8_2:4328295-4328314 | Msa1228810:intron | 35.0% | |
| CTATCAAGTTTCAGCTTCAA+AGG | - | chr8_2:4328353-4328372 | None:intergenic | 35.0% | |
| AAGAATGGAGAATGAGAAAG+TGG | - | chr8_2:4328810-4328829 | None:intergenic | 35.0% | |
| AATGGATGAATACTGAGAGA+AGG | - | chr8_2:4328835-4328854 | None:intergenic | 35.0% | |
| GAATACTTTACATCATGGCA+TGG | - | chr8_2:4328959-4328978 | None:intergenic | 35.0% | |
| TGCTCGAATACTTTACATCA+TGG | - | chr8_2:4328964-4328983 | None:intergenic | 35.0% | |
| GGATAGTGCATGTGATATTT+AGG | + | chr8_2:4329039-4329058 | Msa1228810:intron | 35.0% | |
| !!! | CATGTTCGGTAGTTTTTTTG+TGG | + | chr8_2:4329089-4329108 | Msa1228810:intron | 35.0% |
| ACCTAATCTATTCAACCTTG+AGG | + | chr8_2:4329926-4329945 | Msa1228810:intron | 35.0% | |
| !! | GCTTTGGAACAAAGAAAAAG+AGG | + | chr8_2:4329948-4329967 | Msa1228810:intron | 35.0% |
| !! | GAATGTTTGTTTCTGGAGAA+GGG | - | chr8_2:4330062-4330081 | None:intergenic | 35.0% |
| ! | AGTAGTTGAAGACTTTAAGG+GGG | - | chr8_2:4330118-4330137 | None:intergenic | 35.0% |
| GAGTAGTTGAAGACTTTAAG+GGG | - | chr8_2:4330119-4330138 | None:intergenic | 35.0% | |
| GAACGGAGAGAATAAACATT+AGG | + | chr8_2:4330489-4330508 | Msa1228810:intron | 35.0% | |
| ATGATAGATGAGGTTATGGA+AGG | - | chr8_2:4331108-4331127 | None:intergenic | 35.0% | |
| TCCATAACCTCATCTATCAT+TGG | + | chr8_2:4331108-4331127 | Msa1228810:intron | 35.0% | |
| AGTTGCAAATGCATAAGGAA+AGG | - | chr8_2:4324081-4324100 | None:intergenic | 35.0% | |
| ! | TTTGCAACTGATTTCACTGT+TGG | + | chr8_2:4324092-4324111 | Msa1228810:CDS | 35.0% |
| ! | AAGGAGTTGATTACACCAAA+TGG | + | chr8_2:4331324-4331343 | Msa1228810:CDS | 35.0% |
| ! | AGGAGTTGATTACACCAAAT+GGG | + | chr8_2:4331325-4331344 | Msa1228810:CDS | 35.0% |
| TTTCATCAACTTCATCCACT+TGG | - | chr8_2:4331642-4331661 | None:intergenic | 35.0% | |
| TCCATCAGCATAGTTCTTTA+TGG | - | chr8_2:4331695-4331714 | None:intergenic | 35.0% | |
| CTATGCTGATGGAAATTCTA+AGG | + | chr8_2:4331702-4331721 | Msa1228810:CDS | 35.0% | |
| ! | TTGATGGAGATTTTGTTGGT+GGG | - | chr8_2:4331858-4331877 | None:intergenic | 35.0% |
| CAACAAAAGACTAACACCAT+TGG | - | chr8_2:4331980-4331999 | None:intergenic | 35.0% | |
| !!! | CAATGGTGTTAGTCTTTTGT+TGG | + | chr8_2:4331978-4331997 | Msa1228810:CDS | 35.0% |
| !!! | AGCAATGATTTTGGGTTTGA+TGG | + | chr8_2:4324817-4324836 | Msa1228810:intron | 35.0% |
| !!! | GCAATGATTTTGGGTTTGAT+GGG | + | chr8_2:4324818-4324837 | Msa1228810:intron | 35.0% |
| !!! | AATTCCGTCCTTTTGTTGTT+TGG | + | chr8_2:4332193-4332212 | Msa1228810:three_prime_UTR | 35.0% |
| ATTCGCAACCAAACAACAAA+AGG | - | chr8_2:4332204-4332223 | None:intergenic | 35.0% | |
| ! | GATTATACCAAATGGGCTTC+TGG | + | chr8_2:4324143-4324162 | Msa1228810:intron | 40.0% |
| ! | TGTTTTTCCAGAAGCCCATT+TGG | - | chr8_2:4324153-4324172 | None:intergenic | 40.0% |
| ! | AACTTCATTCACTTGGTGGA+AGG | - | chr8_2:4324444-4324463 | None:intergenic | 40.0% |
| CATCAACTTCATTCACTTGG+TGG | - | chr8_2:4324448-4324467 | None:intergenic | 40.0% | |
| !! | AAGGTTGCATTGACTAAAGC+AGG | + | chr8_2:4324530-4324549 | Msa1228810:intron | 40.0% |
| TACTTCATATGTCCTACTCC+AGG | + | chr8_2:4324560-4324579 | Msa1228810:intron | 40.0% | |
| ! | CACTTGGAGATTTTGTTGGT+GGG | - | chr8_2:4324667-4324686 | None:intergenic | 40.0% |
| ! | GTTGTTGATGGAGTAGTTGA+TGG | - | chr8_2:4324695-4324714 | None:intergenic | 40.0% |
| CTAACAGCTCCATTATCCTT+TGG | - | chr8_2:4324752-4324771 | None:intergenic | 40.0% | |
| !!! | GATTTTGGGTTTGATGGTCT+AGG | + | chr8_2:4324823-4324842 | Msa1228810:intron | 40.0% |
| !! | TTTGAGAACTGATGGTGGTA+AGG | + | chr8_2:4325185-4325204 | Msa1228810:intron | 40.0% |
| ! | AAGAAGCATGCTCAAGCAAA+AGG | + | chr8_2:4325342-4325361 | Msa1228810:intron | 40.0% |
| AGCTTGATTCTCTTTGCATC+AGG | - | chr8_2:4325535-4325554 | None:intergenic | 40.0% | |
| GTTCTATATGGTCTCACTAC+AGG | - | chr8_2:4325814-4325833 | None:intergenic | 40.0% | |
| CTCACAATCTTCAAGTCAAG+TGG | - | chr8_2:4325848-4325867 | None:intergenic | 40.0% | |
| ! | CACTTGACTTGAAGATTGTG+AGG | + | chr8_2:4325846-4325865 | Msa1228810:intron | 40.0% |
| AAAACACAAAGCAAGGCTAG+TGG | + | chr8_2:4326113-4326132 | Msa1228810:intron | 40.0% | |
| ATTCTCTTGTTCCATGCTCT+AGG | - | chr8_2:4326337-4326356 | None:intergenic | 40.0% | |
| GACCAGTTCCTGATTCAAAT+TGG | + | chr8_2:4326358-4326377 | Msa1228810:intron | 40.0% | |
| AGGAATGACTGCTATTGCAA+TGG | + | chr8_2:4326562-4326581 | Msa1228810:intron | 40.0% | |
| GGAATGACTGCTATTGCAAT+GGG | + | chr8_2:4326563-4326582 | Msa1228810:intron | 40.0% | |
| GTCATCACATTGCTTTCAGT+TGG | - | chr8_2:4326902-4326921 | None:intergenic | 40.0% | |
| ! | GGGTCAAACAACTTTGCTTT+TGG | - | chr8_2:4327201-4327220 | None:intergenic | 40.0% |
| TTGCCTTCAATTCTTCTCTC+GGG | - | chr8_2:4327221-4327240 | None:intergenic | 40.0% | |
| TGGAGAGGAAGAAACAGAAA+CGG | + | chr8_2:4327316-4327335 | Msa1228810:intron | 40.0% | |
| AGGTTCACCTAAGGAATTAG+GGG | + | chr8_2:4327731-4327750 | Msa1228810:intron | 40.0% | |
| GGGGATTATGATTAGATGAG+AGG | + | chr8_2:4327750-4327769 | Msa1228810:intron | 40.0% | |
| ATGAGAGGACTTAGGATCAA+GGG | + | chr8_2:4327765-4327784 | Msa1228810:intron | 40.0% | |
| !!! | GCCTTAGGCAAATTGGTTTT+TGG | - | chr8_2:4327957-4327976 | None:intergenic | 40.0% |
| GGACTGTTCTAATCTCTACT+TGG | - | chr8_2:4328021-4328040 | None:intergenic | 40.0% | |
| ! | GGAGAAAAGGTTGTACTGAT+AGG | + | chr8_2:4328107-4328126 | Msa1228810:intron | 40.0% |
| TAGGCTACTCTGATTCAGAT+TGG | + | chr8_2:4328126-4328145 | Msa1228810:intron | 40.0% | |
| GGTGTGAAGATAGAAGTGAT+AGG | + | chr8_2:4328147-4328166 | Msa1228810:intron | 40.0% | |
| AGCTTGTCAAGCAATTTGAC+TGG | + | chr8_2:4328289-4328308 | Msa1228810:intron | 40.0% | |
| GAAAGAACTAGACTGTGAAG+TGG | + | chr8_2:4328322-4328341 | Msa1228810:intron | 40.0% | |
| ATCAGGGAACAAGTGACAAA+GGG | + | chr8_2:4328449-4328468 | Msa1228810:intron | 40.0% | |
| GTTTACTTAAGGGACAAGCT+AGG | + | chr8_2:4328551-4328570 | Msa1228810:intron | 40.0% | |
| ! | GCTAGGTCTCATTGATTGTT+AGG | + | chr8_2:4328568-4328587 | Msa1228810:intron | 40.0% |
| GGAGAATGAGAAAGTGGTTA+TGG | - | chr8_2:4328804-4328823 | None:intergenic | 40.0% | |
| TACTGAGAGAAGGAGAAGAA+TGG | - | chr8_2:4328825-4328844 | None:intergenic | 40.0% | |
| ! | TGGTGCCAATGACTACTAAT+TGG | + | chr8_2:4328986-4329005 | Msa1228810:intron | 40.0% |
| ! | AGGAGTACATGACAAACTCA+AGG | + | chr8_2:4329506-4329525 | Msa1228810:intron | 40.0% |
| ACTATCATCTTACGTGTGGA+AGG | - | chr8_2:4329795-4329814 | None:intergenic | 40.0% | |
| ! | AAAAGGCACGAATAGTCAGT+TGG | - | chr8_2:4329836-4329855 | None:intergenic | 40.0% |
| !!! | CTGACTATTCGTGCCTTTTT+TGG | + | chr8_2:4329837-4329856 | Msa1228810:intron | 40.0% |
| GCCTCAAGGTTGAATAGATT+AGG | - | chr8_2:4329930-4329949 | None:intergenic | 40.0% | |
| TCTATTCAACCTTGAGGCTT+TGG | + | chr8_2:4329932-4329951 | Msa1228810:intron | 40.0% | |
| TTCTTTGTTCCAAAGCCTCA+AGG | - | chr8_2:4329944-4329963 | None:intergenic | 40.0% | |
| GGAGAAGGGAATAACTAACT+AGG | - | chr8_2:4330048-4330067 | None:intergenic | 40.0% | |
| !! | GGAATGTTTGTTTCTGGAGA+AGG | - | chr8_2:4330063-4330082 | None:intergenic | 40.0% |
| ATGATTACACACAACGTACG+CGG | - | chr8_2:4330769-4330788 | None:intergenic | 40.0% | |
| GAAGCACGTGTGGTATTTAA+TGG | - | chr8_2:4330803-4330822 | None:intergenic | 40.0% | |
| ACTTGGCAAGCTAATAGACA+TGG | - | chr8_2:4330862-4330881 | None:intergenic | 40.0% | |
| TAGATGAGGTTATGGAAGGA+GGG | - | chr8_2:4331104-4331123 | None:intergenic | 40.0% | |
| ATAGATGAGGTTATGGAAGG+AGG | - | chr8_2:4331105-4331124 | None:intergenic | 40.0% | |
| GCCAATGATAGATGAGGTTA+TGG | - | chr8_2:4331112-4331131 | None:intergenic | 40.0% | |
| ACTTGTGCCAATGATAGATG+AGG | - | chr8_2:4331118-4331137 | None:intergenic | 40.0% | |
| ! | AGTTTTTCCAGAAGCCCATT+TGG | - | chr8_2:4331342-4331361 | None:intergenic | 40.0% |
| GCCATAAAGAACTATGCTGA+TGG | + | chr8_2:4331691-4331710 | Msa1228810:CDS | 40.0% | |
| !! | AAGGTTGCATTGACTAAAGC+AGG | + | chr8_2:4324530-4324549 | Msa1228810:intron | 40.0% |
| ! | TGATGGAGATTTTGTTGGTG+GGG | - | chr8_2:4331857-4331876 | None:intergenic | 40.0% |
| !! | GTTGATGGAGATTTTGTTGG+TGG | - | chr8_2:4331859-4331878 | None:intergenic | 40.0% |
| !!! | GTGGTTGATGGAGATTTTGT+TGG | - | chr8_2:4331862-4331881 | None:intergenic | 40.0% |
| GAAGTTGAGTTTGTCTCTGA+AGG | - | chr8_2:4331919-4331938 | None:intergenic | 40.0% | |
| CTAACAGCTCCATTATCCTT+TGG | - | chr8_2:4324752-4324771 | None:intergenic | 40.0% | |
| !!! | ATTTTGGGTTTGATGGGCTA+GGG | + | chr8_2:4332024-4332043 | Msa1228810:CDS | 40.0% |
| GCAACCAAACAACAAAAGGA+CGG | - | chr8_2:4332200-4332219 | None:intergenic | 40.0% | |
| GAGAGAGGACAAACATCAAG+AGG | + | chr8_2:4324239-4324258 | Msa1228810:intron | 45.0% | |
| CTAGTACAATGACCTGGAGT+AGG | - | chr8_2:4324575-4324594 | None:intergenic | 45.0% | |
| CCAGTACTAGTACAATGACC+TGG | - | chr8_2:4324581-4324600 | None:intergenic | 45.0% | |
| CCAGGTCATTGTACTAGTAC+TGG | + | chr8_2:4324578-4324597 | Msa1228810:intron | 45.0% | |
| ! | GGTCATTGTACTAGTACTGG+TGG | + | chr8_2:4324581-4324600 | Msa1228810:intron | 45.0% |
| !! | TGGAGATTTTGTTGGTGGGA+GGG | - | chr8_2:4324663-4324682 | None:intergenic | 45.0% |
| !! | TTGGAGATTTTGTTGGTGGG+AGG | - | chr8_2:4324664-4324683 | None:intergenic | 45.0% |
| ! | CCACTTGGAGATTTTGTTGG+TGG | - | chr8_2:4324668-4324687 | None:intergenic | 45.0% |
| CCACCAACAAAATCTCCAAG+TGG | + | chr8_2:4324665-4324684 | Msa1228810:CDS | 45.0% | |
| !!! | GTGCCACTTGGAGATTTTGT+TGG | - | chr8_2:4324671-4324690 | None:intergenic | 45.0% |
| ACTCCATCAACAACTCCTTC+AGG | + | chr8_2:4324701-4324720 | Msa1228810:CDS | 45.0% | |
| CTCCATCAACAACTCCTTCA+GGG | + | chr8_2:4324702-4324721 | Msa1228810:CDS | 45.0% | |
| GAAGTTGAGTTTGTCCCTGA+AGG | - | chr8_2:4324719-4324738 | None:intergenic | 45.0% | |
| AACTTCTCCATCACCACCAA+AGG | + | chr8_2:4324733-4324752 | Msa1228810:CDS | 45.0% | |
| !! | CCATTATCCTTTGGTGGTGA+TGG | - | chr8_2:4324743-4324762 | None:intergenic | 45.0% |
| CCATCACCACCAAAGGATAA+TGG | + | chr8_2:4324740-4324759 | Msa1228810:CDS | 45.0% | |
| ACAGCTCCATTATCCTTTGG+TGG | - | chr8_2:4324749-4324768 | None:intergenic | 45.0% | |
| GGAGCTGTTAGTGTTTCCAA+TGG | + | chr8_2:4324761-4324780 | Msa1228810:CDS | 45.0% | |
| !! | ACTGATGGTGGTAAGGACTA+AGG | + | chr8_2:4325192-4325211 | Msa1228810:intron | 45.0% |
| ! | TCATTGTGTTGGGGAGTGTA+GGG | - | chr8_2:4325283-4325302 | None:intergenic | 45.0% |
| ! | AGGACAAGCCTCACAAGTTT+TGG | + | chr8_2:4325362-4325381 | Msa1228810:intron | 45.0% |
| ! | GGACAAGCCTCACAAGTTTT+GGG | + | chr8_2:4325363-4325382 | Msa1228810:intron | 45.0% |
| ! | GACAAGCCTCACAAGTTTTG+GGG | + | chr8_2:4325364-4325383 | Msa1228810:intron | 45.0% |
| TCTTCTCCCCAAAACTTGTG+AGG | - | chr8_2:4325373-4325392 | None:intergenic | 45.0% | |
| ! | GGCACTTTATGGATTGAAGC+AGG | + | chr8_2:4326309-4326328 | Msa1228810:intron | 45.0% |
| GACTGCTATTGCAATGGGAA+TGG | + | chr8_2:4326568-4326587 | Msa1228810:intron | 45.0% | |
| TGACCCGAGAGAAGAATTGA+AGG | + | chr8_2:4327215-4327234 | Msa1228810:intron | 45.0% | |
| !!! | CATTCACGTTTTGGGGAACA+AGG | + | chr8_2:4327279-4327298 | Msa1228810:intron | 45.0% |
| ! | ACAAGGCTGAATCACGGTTT+TGG | + | chr8_2:4327296-4327315 | Msa1228810:intron | 45.0% |
| ! | TCTAACGGACAATCTAGGGA+TGG | + | chr8_2:4327652-4327671 | Msa1228810:intron | 45.0% |
| GATGAGAGGACTTAGGATCA+AGG | + | chr8_2:4327764-4327783 | Msa1228810:intron | 45.0% | |
| GTAAATAAGGGGGTTGCCTT+AGG | - | chr8_2:4327972-4327991 | None:intergenic | 45.0% | |
| AGAGATTAGAACAGTCCCTG+TGG | + | chr8_2:4328024-4328043 | Msa1228810:intron | 45.0% | |
| TGCGAAACTGAGTACATAGC+AGG | + | chr8_2:4328257-4328276 | Msa1228810:intron | 45.0% | |
| CATCAGGGAACAAGTGACAA+AGG | + | chr8_2:4328448-4328467 | Msa1228810:intron | 45.0% | |
| TCAACTAGCTGCACTTCAGT+TGG | - | chr8_2:4328497-4328516 | None:intergenic | 45.0% | |
| TGACAAACTTACGGAAGGGT+TGG | + | chr8_2:4330164-4330183 | Msa1228810:intron | 45.0% | |
| TAAATACCACACGTGCTTCC+TGG | + | chr8_2:4330804-4330823 | Msa1228810:intron | 45.0% | |
| AGATGAGGTTATGGAAGGAG+GGG | - | chr8_2:4331103-4331122 | None:intergenic | 45.0% | |
| AACTCCTTGATTCCATCCAC+TGG | - | chr8_2:4331312-4331331 | None:intergenic | 45.0% | |
| ! | GATTACACCAAATGGGCTTC+TGG | + | chr8_2:4331332-4331351 | Msa1228810:CDS | 45.0% |
| ! | AACTTCATCCACTTGGTGGA+AGG | - | chr8_2:4331635-4331654 | None:intergenic | 45.0% |
| CATCAACTTCATCCACTTGG+TGG | - | chr8_2:4331639-4331658 | None:intergenic | 45.0% | |
| TACTTCATATGCCCTACTCC+AGG | + | chr8_2:4331751-4331770 | Msa1228810:CDS | 45.0% | |
| TCGTACAATGACCTGGAGTA+GGG | - | chr8_2:4331765-4331784 | None:intergenic | 45.0% | |
| !! | ATGGAGATTTTGTTGGTGGG+GGG | - | chr8_2:4331855-4331874 | None:intergenic | 45.0% |
| !! | GATGGAGATTTTGTTGGTGG+GGG | - | chr8_2:4331856-4331875 | None:intergenic | 45.0% |
| !! | GTAGTTGATGGTGTGGTTGA+TGG | - | chr8_2:4331874-4331893 | None:intergenic | 45.0% |
| !! | TGATGGAGTAGTTGATGGTG+TGG | - | chr8_2:4331881-4331900 | None:intergenic | 45.0% |
| !! | GTGGTTGATGGAGTAGTTGA+TGG | - | chr8_2:4331886-4331905 | None:intergenic | 45.0% |
| ! | TTTGTCTCTGAAGGAGCTGA+TGG | - | chr8_2:4331910-4331929 | None:intergenic | 45.0% |
| AACTTCTCCATCACCACCAA+AGG | + | chr8_2:4324733-4324752 | Msa1228810:CDS | 45.0% | |
| !! | CCATTATCCTTTGGTGGTGA+TGG | - | chr8_2:4324743-4324762 | None:intergenic | 45.0% |
| CCATCACCACCAAAGGATAA+TGG | + | chr8_2:4324740-4324759 | Msa1228810:CDS | 45.0% | |
| ACAGCTCCATTATCCTTTGG+TGG | - | chr8_2:4324749-4324768 | None:intergenic | 45.0% | |
| GGAGCTGTTAGTGTTTCCAA+TGG | + | chr8_2:4324761-4324780 | Msa1228810:CDS | 45.0% | |
| !!! | GATTTTGGGTTTGATGGGCT+AGG | + | chr8_2:4332023-4332042 | Msa1228810:CDS | 45.0% |
| !! | TTCACTGTTGGTGATGCCAG+TGG | + | chr8_2:4324104-4324123 | Msa1228810:intron | 50.0% |
| AACTCCTTGAGTCCATCCAC+TGG | - | chr8_2:4324123-4324142 | None:intergenic | 50.0% | |
| !! | GTAGTTGATGGAGTGCCACT+TGG | - | chr8_2:4324683-4324702 | None:intergenic | 50.0% |
| GTCCCTGAAGGAGTTGTTGA+TGG | - | chr8_2:4324707-4324726 | None:intergenic | 50.0% | |
| ! | GTCATTGTGTTGGGGAGTGT+AGG | - | chr8_2:4325284-4325303 | None:intergenic | 50.0% |
| GTGGCTAGAAGCTGTGAGAT+TGG | + | chr8_2:4326132-4326151 | Msa1228810:intron | 50.0% | |
| TGAAGCAGGATCCTAGAGCA+TGG | + | chr8_2:4326323-4326342 | Msa1228810:intron | 50.0% | |
| TGGGGAACAAGGCTGAATCA+CGG | + | chr8_2:4327290-4327309 | Msa1228810:intron | 50.0% | |
| !!! | GCTGAATCACGGTTTTGGAG+AGG | + | chr8_2:4327301-4327320 | Msa1228810:intron | 50.0% |
| CGCTTGCCGTAGCAAAAAGA+AGG | + | chr8_2:4329200-4329219 | Msa1228810:intron | 50.0% | |
| AGAGGCCAACCTTTGTGACA+TGG | + | chr8_2:4329966-4329985 | Msa1228810:intron | 50.0% | |
| ATCTCGCGTCCATGTCACAA+AGG | - | chr8_2:4329978-4329997 | None:intergenic | 50.0% | |
| ! | CATTTACCAGGAAGCACGTG+TGG | - | chr8_2:4330813-4330832 | None:intergenic | 50.0% |
| !! | TTCACTGTTGGTGATGCCAG+TGG | + | chr8_2:4324104-4324123 | Msa1228810:intron | 50.0% |
| GATGCCAGTGGATGGAATCA+AGG | + | chr8_2:4331305-4331324 | Msa1228810:CDS | 50.0% | |
| ATATGGCTCCTTCCACCAAG+TGG | + | chr8_2:4324433-4324452 | Msa1228810:CDS | 50.0% | |
| CTCGTACAATGACCTGGAGT+AGG | - | chr8_2:4331766-4331785 | None:intergenic | 50.0% | |
| CCAGTACTCGTACAATGACC+TGG | - | chr8_2:4331772-4331791 | None:intergenic | 50.0% | |
| CCAGGTCATTGTACGAGTAC+TGG | + | chr8_2:4331769-4331788 | Msa1228810:CDS | 50.0% | |
| !! | GGTCATTGTACGAGTACTGG+TGG | + | chr8_2:4331772-4331791 | Msa1228810:CDS | 50.0% |
| !! | TGGAGATTTTGTTGGTGGGG+GGG | - | chr8_2:4331854-4331873 | None:intergenic | 50.0% |
| !! | CTGTTGGTGATGCCAGTGGA+TGG | + | chr8_2:4324108-4324127 | Msa1228810:intron | 55.0% |
| ! | GATGCCAGTGGATGGACTCA+AGG | + | chr8_2:4324116-4324135 | Msa1228810:intron | 55.0% |
| !! | GAGGGTACCACTTGGAGTTG+GGG | - | chr8_2:4324645-4324664 | None:intergenic | 55.0% |
| !! | GGAGGGTACCACTTGGAGTT+GGG | - | chr8_2:4324646-4324665 | None:intergenic | 55.0% |
| GGGGGTTGCCTTAGGCAAAT+TGG | - | chr8_2:4327964-4327983 | None:intergenic | 55.0% | |
| CGCGTCCATGTCACAAAGGT+TGG | - | chr8_2:4329974-4329993 | None:intergenic | 55.0% | |
| !! | CTGTTGGTGATGCCAGTGGA+TGG | + | chr8_2:4324108-4324127 | Msa1228810:intron | 55.0% |
| ! | GGAGCTGATGGTGTGGTTGA+TGG | - | chr8_2:4331898-4331917 | None:intergenic | 55.0% |
| ! | CTCTGAAGGAGCTGATGGTG+TGG | - | chr8_2:4331905-4331924 | None:intergenic | 55.0% |
| AGCACCACCCCAACTCCAAG+TGG | + | chr8_2:4324635-4324654 | Msa1228810:CDS | 60.0% | |
| GGTACCACTTGGAGTTGGGG+TGG | - | chr8_2:4324642-4324661 | None:intergenic | 60.0% | |
| !! | GGGAGGGTACCACTTGGAGT+TGG | - | chr8_2:4324647-4324666 | None:intergenic | 60.0% |
| !! | GTTGGTGGGAGGGTACCACT+TGG | - | chr8_2:4324653-4324672 | None:intergenic | 60.0% |
| AGCACCACCCCAACTCCAAG+TGG | + | chr8_2:4324635-4324654 | Msa1228810:CDS | 60.0% | |
| !! | GGTGCCACTTGGAGTTGGGG+TGG | - | chr8_2:4331833-4331852 | None:intergenic | 65.0% |
| !! | GGGGGTGCCACTTGGAGTTG+GGG | - | chr8_2:4331836-4331855 | None:intergenic | 65.0% |
| !! | GGGGGGTGCCACTTGGAGTT+GGG | - | chr8_2:4331837-4331856 | None:intergenic | 65.0% |
| !! | GGGGGGGTGCCACTTGGAGT+TGG | - | chr8_2:4331838-4331857 | None:intergenic | 70.0% |
| !! | GTTGGTGGGGGGGTGCCACT+TGG | - | chr8_2:4331844-4331863 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 4324033 | 4332298 | 4324033 | ID=Msa1228810;Name=Msa1228810 |
| chr8_2 | mRNA | 4324033 | 4332298 | 4324033 | ID=Msa1228810-mRNA-1;Parent=Msa1228810;Name=Msa1228810-mRNA-1;_AED=0.16;_eAED=0.16;_QI=2|0.25|0.2|1|0.25|0.2|5|254|329 |
| chr8_2 | exon | 4324033 | 4324122 | 4324033 | ID=Msa1228810-mRNA-1:exon:1423;Parent=Msa1228810-mRNA-1 |
| chr8_2 | exon | 4324426 | 4324488 | 4324426 | ID=Msa1228810-mRNA-1:exon:1424;Parent=Msa1228810-mRNA-1 |
| chr8_2 | exon | 4324582 | 4324830 | 4324582 | ID=Msa1228810-mRNA-1:exon:1425;Parent=Msa1228810-mRNA-1 |
| chr8_2 | exon | 4331222 | 4331383 | 4331222 | ID=Msa1228810-mRNA-1:exon:1426;Parent=Msa1228810-mRNA-1 |
| chr8_2 | exon | 4331617 | 4332298 | 4331617 | ID=Msa1228810-mRNA-1:exon:1427;Parent=Msa1228810-mRNA-1 |
| chr8_2 | five_prime_UTR | 4324033 | 4324034 | 4324033 | ID=Msa1228810-mRNA-1:five_prime_utr;Parent=Msa1228810-mRNA-1 |
| chr8_2 | CDS | 4324035 | 4324122 | 4324035 | ID=Msa1228810-mRNA-1:cds;Parent=Msa1228810-mRNA-1 |
| chr8_2 | CDS | 4324426 | 4324488 | 4324426 | ID=Msa1228810-mRNA-1:cds;Parent=Msa1228810-mRNA-1 |
| chr8_2 | CDS | 4324582 | 4324830 | 4324582 | ID=Msa1228810-mRNA-1:cds;Parent=Msa1228810-mRNA-1 |
| chr8_2 | CDS | 4331222 | 4331383 | 4331222 | ID=Msa1228810-mRNA-1:cds;Parent=Msa1228810-mRNA-1 |
| chr8_2 | CDS | 4331617 | 4332044 | 4331617 | ID=Msa1228810-mRNA-1:cds;Parent=Msa1228810-mRNA-1 |
| chr8_2 | three_prime_UTR | 4332045 | 4332298 | 4332045 | ID=Msa1228810-mRNA-1:three_prime_utr;Parent=Msa1228810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
