Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1422230 | A0A072UWV1 | 96.000 | 225 | 6 | 2 | 1 | 222 | 1 | 225 | 1.54e-153 | 434 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000800 | Msa1422230 | 0.805006 | 1.643762e-49 | -8.615850e-47 |
| Msa0005260 | Msa1422230 | 0.834713 | 2.556491e-56 | -8.615850e-47 |
| Msa0026420 | Msa1422230 | 0.822842 | 1.907477e-53 | -8.615850e-47 |
| Msa0030800 | Msa1422230 | 0.824372 | 8.366606e-54 | -8.615850e-47 |
| Msa0051480 | Msa1422230 | 0.821373 | 4.178888e-53 | -8.615850e-47 |
| Msa0051730 | Msa1422230 | 0.803810 | 2.918549e-49 | -8.615850e-47 |
| Msa0052780 | Msa1422230 | 0.813858 | 2.068630e-51 | -8.615850e-47 |
| Msa0071470 | Msa1422230 | 0.817100 | 3.928018e-52 | -8.615850e-47 |
| Msa0078210 | Msa1422230 | 0.814166 | 1.769224e-51 | -8.615850e-47 |
| Msa0086360 | Msa1422230 | 0.805099 | 1.572292e-49 | -8.615850e-47 |
| Msa0090380 | Msa1422230 | 0.814234 | 1.709474e-51 | -8.615850e-47 |
| Msa0092970 | Msa1422230 | 0.810792 | 9.665898e-51 | -8.615850e-47 |
| Msa0097570 | Msa1422230 | 0.811575 | 6.535513e-51 | -8.615850e-47 |
| Msa0104810 | Msa1422230 | 0.851272 | 9.885225e-61 | -8.615850e-47 |
| Msa0119430 | Msa1422230 | 0.808830 | 2.554395e-50 | -8.615850e-47 |
| Msa1344330 | Msa1422230 | 0.802716 | 4.915629e-49 | -8.615850e-47 |
| Msa1349830 | Msa1422230 | 0.826219 | 3.059655e-54 | -8.615850e-47 |
| Msa1355510 | Msa1422230 | 0.833164 | 6.241946e-56 | -8.615850e-47 |
| Msa1359770 | Msa1422230 | 0.804764 | 1.847213e-49 | -8.615850e-47 |
| Msa1369320 | Msa1422230 | 0.841809 | 3.794124e-58 | -8.615850e-47 |
| Msa1370420 | Msa1422230 | 0.810933 | 9.010486e-51 | -8.615850e-47 |
| Msa1377050 | Msa1422230 | 0.818859 | 1.572864e-52 | -8.615850e-47 |
| Msa1387610 | Msa1422230 | 0.818984 | 1.473578e-52 | -8.615850e-47 |
| Msa1398120 | Msa1422230 | 0.810374 | 1.190014e-50 | -8.615850e-47 |
| Msa1399930 | Msa1422230 | 0.815270 | 1.007391e-51 | -8.615850e-47 |
| Msa1401110 | Msa1422230 | 0.841545 | 4.453817e-58 | -8.615850e-47 |
| Msa1402350 | Msa1422230 | 0.810656 | 1.034036e-50 | -8.615850e-47 |
| Msa1403690 | Msa1422230 | 0.807670 | 4.513416e-50 | -8.615850e-47 |
| Msa1412410 | Msa1422230 | 0.816547 | 5.227644e-52 | -8.615850e-47 |
| Msa1413800 | Msa1422230 | 0.846863 | 1.662307e-59 | -8.615850e-47 |
| Msa1420540 | Msa1422230 | 0.824127 | 9.551629e-54 | -8.615850e-47 |
| Msa1422230 | Msa1427000 | 0.812383 | 4.359001e-51 | -8.615850e-47 |
| Msa1422230 | Msa1427860 | 0.814112 | 1.818076e-51 | -8.615850e-47 |
| Msa1422230 | Msa1433410 | 0.809260 | 2.065550e-50 | -8.615850e-47 |
| Msa1422230 | Msa1435320 | 0.855931 | 4.529319e-62 | -8.615850e-47 |
| Msa1422230 | Msa1436090 | 0.845136 | 4.903015e-59 | -8.615850e-47 |
| Msa1422230 | Msa1438160 | 0.824350 | 8.464985e-54 | -8.615850e-47 |
| Msa1422230 | Msa1439780 | 0.801991 | 6.932735e-49 | -8.615850e-47 |
| Msa1422230 | Msa1443400 | 0.855245 | 7.177904e-62 | -8.615850e-47 |
| Msa1422230 | Msa1448040 | 0.856077 | 4.104475e-62 | -8.615850e-47 |
| Msa1422230 | Msa1449470 | 0.814421 | 1.554189e-51 | -8.615850e-47 |
| Msa1422230 | Msa1453600 | 0.806788 | 6.938871e-50 | -8.615850e-47 |
| Msa1422230 | Msa1459920 | 0.830204 | 3.350440e-55 | -8.615850e-47 |
| Msa0604570 | Msa1422230 | 0.806743 | 7.091579e-50 | -8.615850e-47 |
| Msa0611060 | Msa1422230 | 0.835163 | 1.968666e-56 | -8.615850e-47 |
| Msa0615200 | Msa1422230 | 0.809159 | 2.171134e-50 | -8.615850e-47 |
| Msa0618550 | Msa1422230 | 0.806620 | 7.529954e-50 | -8.615850e-47 |
| Msa0631130 | Msa1422230 | 0.800189 | 1.619998e-48 | -8.615850e-47 |
| Msa0657340 | Msa1422230 | 0.848643 | 5.378376e-60 | -8.615850e-47 |
| Msa0669350 | Msa1422230 | 0.814179 | 1.757733e-51 | -8.615850e-47 |
| Msa0685240 | Msa1422230 | 0.810313 | 1.226577e-50 | -8.615850e-47 |
| Msa0701430 | Msa1422230 | 0.827479 | 1.529595e-54 | -8.615850e-47 |
| Msa0704560 | Msa1422230 | 0.801560 | 8.499839e-49 | -8.615850e-47 |
| Msa0713060 | Msa1422230 | 0.841561 | 4.410986e-58 | -8.615850e-47 |
| Msa0716620 | Msa1422230 | 0.811335 | 7.372295e-51 | -8.615850e-47 |
| Msa0729350 | Msa1422230 | 0.814650 | 1.382560e-51 | -8.615850e-47 |
| Msa0731690 | Msa1422230 | 0.811311 | 7.458117e-51 | -8.615850e-47 |
| Msa0740630 | Msa1422230 | 0.826108 | 3.250882e-54 | -8.615850e-47 |
| Msa0744540 | Msa1422230 | 0.820478 | 6.715432e-53 | -8.615850e-47 |
| Msa0744550 | Msa1422230 | 0.820948 | 5.235942e-53 | -8.615850e-47 |
| Msa0744560 | Msa1422230 | 0.839292 | 1.728625e-57 | -8.615850e-47 |
| Msa0746340 | Msa1422230 | 0.855735 | 5.166373e-62 | -8.615850e-47 |
| Msa0795320 | Msa1422230 | 0.808542 | 2.943304e-50 | -8.615850e-47 |
| Msa0804870 | Msa1422230 | 0.830760 | 2.449907e-55 | -8.615850e-47 |
| Msa0806910 | Msa1422230 | 0.802663 | 5.042795e-49 | -8.615850e-47 |
| Msa0807670 | Msa1422230 | 0.829951 | 3.860821e-55 | -8.615850e-47 |
| Msa0807680 | Msa1422230 | 0.831967 | 1.236195e-55 | -8.615850e-47 |
| Msa0816630 | Msa1422230 | 0.840345 | 9.196916e-58 | -8.615850e-47 |
| Msa0820880 | Msa1422230 | 0.830829 | 2.355212e-55 | -8.615850e-47 |
| Msa0826370 | Msa1422230 | 0.815377 | 9.535992e-52 | -8.615850e-47 |
| Msa0826380 | Msa1422230 | 0.840875 | 6.680853e-58 | -8.615850e-47 |
| Msa0826450 | Msa1422230 | 0.838472 | 2.817655e-57 | -8.615850e-47 |
| Msa0829050 | Msa1422230 | 0.805215 | 1.486212e-49 | -8.615850e-47 |
| Msa0832950 | Msa1422230 | 0.828823 | 7.255348e-55 | -8.615850e-47 |
| Msa0129640 | Msa1422230 | 0.813758 | 2.176756e-51 | -8.615850e-47 |
| Msa0137860 | Msa1422230 | 0.807301 | 5.403174e-50 | -8.615850e-47 |
| Msa0143640 | Msa1422230 | 0.836212 | 1.068248e-56 | -8.615850e-47 |
| Msa0145430 | Msa1422230 | 0.805930 | 1.052147e-49 | -8.615850e-47 |
| Msa0146200 | Msa1422230 | 0.822862 | 1.887852e-53 | -8.615850e-47 |
| Msa0147790 | Msa1422230 | 0.824500 | 7.806516e-54 | -8.615850e-47 |
| Msa0150620 | Msa1422230 | 0.845025 | 5.253344e-59 | -8.615850e-47 |
| Msa0151170 | Msa1422230 | 0.815766 | 7.814005e-52 | -8.615850e-47 |
| Msa0162680 | Msa1422230 | 0.839797 | 1.278023e-57 | -8.615850e-47 |
| Msa0185100 | Msa1422230 | 0.821479 | 3.949850e-53 | -8.615850e-47 |
| Msa0186240 | Msa1422230 | 0.826942 | 2.055972e-54 | -8.615850e-47 |
| Msa0193190 | Msa1422230 | 0.826528 | 2.581503e-54 | -8.615850e-47 |
| Msa0202380 | Msa1422230 | 0.820291 | 7.412117e-53 | -8.615850e-47 |
| Msa0203090 | Msa1422230 | 0.829859 | 4.065058e-55 | -8.615850e-47 |
| Msa0223140 | Msa1422230 | 0.805403 | 1.357546e-49 | -8.615850e-47 |
| Msa0234740 | Msa1422230 | 0.808151 | 3.565327e-50 | -8.615850e-47 |
| Msa0235840 | Msa1422230 | 0.808186 | 3.504791e-50 | -8.615850e-47 |
| Msa0238710 | Msa1422230 | 0.844379 | 7.840488e-59 | -8.615850e-47 |
| Msa1225580 | Msa1422230 | 0.830406 | 2.989672e-55 | -8.615850e-47 |
| Msa1228810 | Msa1422230 | 0.800248 | 1.575776e-48 | -8.615850e-47 |
| Msa1252810 | Msa1422230 | 0.840282 | 9.552344e-58 | -8.615850e-47 |
| Msa1254870 | Msa1422230 | 0.830172 | 3.410942e-55 | -8.615850e-47 |
| Msa1262540 | Msa1422230 | 0.820471 | 6.742070e-53 | -8.615850e-47 |
| Msa1299480 | Msa1422230 | 0.824747 | 6.827274e-54 | -8.615850e-47 |
| Msa1299780 | Msa1422230 | 0.855376 | 6.578086e-62 | -8.615850e-47 |
| Msa1328430 | Msa1422230 | 0.830031 | 3.691061e-55 | -8.615850e-47 |
| Msa1329900 | Msa1422230 | 0.839675 | 1.374708e-57 | -8.615850e-47 |
| Msa1333700 | Msa1422230 | 0.830305 | 3.164791e-55 | -8.615850e-47 |
| Msa0366810 | Msa1422230 | 0.802139 | 6.463869e-49 | -8.615850e-47 |
| Msa0383900 | Msa1422230 | 0.838471 | 2.819177e-57 | -8.615850e-47 |
| Msa0385320 | Msa1422230 | 0.815904 | 7.278675e-52 | -8.615850e-47 |
| Msa0393100 | Msa1422230 | 0.889769 | 1.800625e-73 | -8.615850e-47 |
| Msa0400010 | Msa1422230 | 0.800696 | 1.276868e-48 | -8.615850e-47 |
| Msa0402800 | Msa1422230 | 0.861205 | 1.208037e-63 | -8.615850e-47 |
| Msa0434300 | Msa1422230 | 0.834698 | 2.578809e-56 | -8.615850e-47 |
| Msa0434400 | Msa1422230 | 0.841659 | 4.155277e-58 | -8.615850e-47 |
| Msa0438070 | Msa1422230 | 0.817033 | 4.067067e-52 | -8.615850e-47 |
| Msa0443450 | Msa1422230 | 0.886573 | 3.039641e-72 | -8.615850e-47 |
| Msa0447160 | Msa1422230 | 0.814156 | 1.777858e-51 | -8.615850e-47 |
| Msa0449620 | Msa1422230 | 0.818962 | 1.490858e-52 | -8.615850e-47 |
| Msa0476770 | Msa1422230 | 0.813290 | 2.758182e-51 | -8.615850e-47 |
| Msa0478080 | Msa1422230 | 0.808628 | 2.821438e-50 | -8.615850e-47 |
| Msa0480530 | Msa1422230 | 0.818626 | 1.776483e-52 | -8.615850e-47 |
| Msa0480540 | Msa1422230 | 0.820285 | 7.436360e-53 | -8.615850e-47 |
| Msa0480550 | Msa1422230 | 0.841171 | 5.586832e-58 | -8.615850e-47 |
| Msa0481770 | Msa1422230 | 0.801060 | 1.075758e-48 | -8.615850e-47 |
| Msa1000800 | Msa1422230 | 0.805820 | 1.110047e-49 | -8.615850e-47 |
| Msa1025750 | Msa1422230 | 0.822255 | 2.612421e-53 | -8.615850e-47 |
| Msa1027910 | Msa1422230 | 0.822739 | 2.016558e-53 | -8.615850e-47 |
| Msa1030200 | Msa1422230 | 0.800479 | 1.413914e-48 | -8.615850e-47 |
| Msa1030210 | Msa1422230 | 0.838834 | 2.271838e-57 | -8.615850e-47 |
| Msa1061970 | Msa1422230 | 0.835635 | 1.496115e-56 | -8.615850e-47 |
| Msa1064240 | Msa1422230 | 0.812290 | 4.566432e-51 | -8.615850e-47 |
| Msa1064510 | Msa1422230 | 0.808220 | 3.446366e-50 | -8.615850e-47 |
| Msa1069250 | Msa1422230 | 0.841500 | 4.575194e-58 | -8.615850e-47 |
| Msa1075090 | Msa1422230 | 0.802807 | 4.709053e-49 | -8.615850e-47 |
| Msa1080820 | Msa1422230 | 0.836676 | 8.139241e-57 | -8.615850e-47 |
| Msa1082600 | Msa1422230 | 0.800415 | 1.456683e-48 | -8.615850e-47 |
| Msa1084890 | Msa1422230 | 0.807543 | 4.801701e-50 | -8.615850e-47 |
| Msa1089600 | Msa1422230 | 0.823763 | 1.162421e-53 | -8.615850e-47 |
| Msa1095590 | Msa1422230 | 0.824347 | 8.478368e-54 | -8.615850e-47 |
| Msa1098970 | Msa1422230 | 0.803596 | 3.232521e-49 | -8.615850e-47 |
| Msa1102210 | Msa1422230 | 0.808833 | 2.549748e-50 | -8.615850e-47 |
| Msa1105360 | Msa1422230 | 0.808764 | 2.637894e-50 | -8.615850e-47 |
| Msa0245400 | Msa1422230 | 0.830019 | 3.717717e-55 | -8.615850e-47 |
| Msa0246140 | Msa1422230 | 0.845035 | 5.219272e-59 | -8.615850e-47 |
| Msa0254640 | Msa1422230 | 0.845396 | 4.169730e-59 | -8.615850e-47 |
| Msa0264680 | Msa1422230 | 0.832647 | 8.388474e-56 | -8.615850e-47 |
| Msa0265480 | Msa1422230 | 0.829696 | 4.455749e-55 | -8.615850e-47 |
| Msa0267900 | Msa1422230 | 0.829385 | 5.302453e-55 | -8.615850e-47 |
| Msa0273070 | Msa1422230 | 0.816994 | 4.149799e-52 | -8.615850e-47 |
| Msa0276430 | Msa1422230 | 0.811088 | 8.337601e-51 | -8.615850e-47 |
| Msa0284730 | Msa1422230 | 0.818641 | 1.762786e-52 | -8.615850e-47 |
| Msa0302510 | Msa1422230 | 0.822017 | 2.965998e-53 | -8.615850e-47 |
| Msa0302730 | Msa1422230 | 0.815094 | 1.102520e-51 | -8.615850e-47 |
| Msa0306310 | Msa1422230 | 0.862254 | 5.770843e-64 | -8.615850e-47 |
| Msa0307350 | Msa1422230 | 0.809148 | 2.183700e-50 | -8.615850e-47 |
| Msa0316470 | Msa1422230 | 0.846662 | 1.886753e-59 | -8.615850e-47 |
| Msa0319680 | Msa1422230 | 0.868548 | 6.014839e-66 | -8.615850e-47 |
| Msa0324810 | Msa1422230 | 0.800891 | 1.164963e-48 | -8.615850e-47 |
| Msa0332360 | Msa1422230 | 0.836699 | 8.028335e-57 | -8.615850e-47 |
| Msa0339720 | Msa1422230 | 0.808106 | 3.645781e-50 | -8.615850e-47 |
| Msa0340370 | Msa1422230 | 0.816848 | 4.475100e-52 | -8.615850e-47 |
| Msa0345980 | Msa1422230 | 0.851601 | 7.979067e-61 | -8.615850e-47 |
| Msa0356580 | Msa1422230 | 0.827788 | 1.289228e-54 | -8.615850e-47 |
| Msa1110900 | Msa1422230 | 0.813780 | 2.152683e-51 | -8.615850e-47 |
| Msa1118960 | Msa1422230 | 0.841513 | 4.541796e-58 | -8.615850e-47 |
| Msa1120580 | Msa1422230 | 0.834125 | 3.590846e-56 | -8.615850e-47 |
| Msa1131790 | Msa1422230 | 0.827235 | 1.749445e-54 | -8.615850e-47 |
| Msa1154240 | Msa1422230 | 0.823510 | 1.332415e-53 | -8.615850e-47 |
| Msa1157110 | Msa1422230 | 0.836579 | 8.613151e-57 | -8.615850e-47 |
| Msa1165430 | Msa1422230 | 0.809285 | 2.040228e-50 | -8.615850e-47 |
| Msa1173150 | Msa1422230 | 0.814762 | 1.306302e-51 | -8.615850e-47 |
| Msa1174280 | Msa1422230 | 0.829208 | 5.852952e-55 | -8.615850e-47 |
| Msa1184400 | Msa1422230 | 0.817000 | 4.136203e-52 | -8.615850e-47 |
| Msa1187490 | Msa1422230 | 0.815092 | 1.103765e-51 | -8.615850e-47 |
| Msa1199870 | Msa1422230 | 0.830704 | 2.527841e-55 | -8.615850e-47 |
| Msa1202110 | Msa1422230 | 0.834063 | 3.721054e-56 | -8.615850e-47 |
| Msa1211610 | Msa1422230 | 0.821721 | 3.472881e-53 | -8.615850e-47 |
| Msa1212470 | Msa1422230 | 0.842421 | 2.613234e-58 | -8.615850e-47 |
| Msa1217260 | Msa1422230 | 0.817025 | 4.083635e-52 | -8.615850e-47 |
| Msa1221220 | Msa1422230 | 0.804708 | 1.897312e-49 | -8.615850e-47 |
| Msa1223560 | Msa1422230 | 0.811234 | 7.751082e-51 | -8.615850e-47 |
| Msa1224510 | Msa1422230 | 0.848699 | 5.189368e-60 | -8.615850e-47 |
| Msa0485160 | Msa1422230 | 0.803161 | 3.977752e-49 | -8.615850e-47 |
| Msa0488580 | Msa1422230 | 0.869187 | 3.736178e-66 | -8.615850e-47 |
| Msa0493870 | Msa1422230 | 0.805368 | 1.380449e-49 | -8.615850e-47 |
| Msa0497690 | Msa1422230 | 0.809640 | 1.712024e-50 | -8.615850e-47 |
| Msa0497860 | Msa1422230 | 0.858013 | 1.102337e-62 | -8.615850e-47 |
| Msa0500770 | Msa1422230 | 0.823034 | 1.721304e-53 | -8.615850e-47 |
| Msa0506370 | Msa1422230 | 0.803931 | 2.754355e-49 | -8.615850e-47 |
| Msa0521380 | Msa1422230 | 0.816360 | 5.757029e-52 | -8.615850e-47 |
| Msa0522140 | Msa1422230 | 0.825625 | 4.233918e-54 | -8.615850e-47 |
| Msa0522170 | Msa1422230 | 0.828091 | 1.089744e-54 | -8.615850e-47 |
| Msa0534610 | Msa1422230 | 0.810343 | 1.208443e-50 | -8.615850e-47 |
| Msa0549140 | Msa1422230 | 0.805012 | 1.639455e-49 | -8.615850e-47 |
| Msa0550550 | Msa1422230 | 0.808408 | 3.143583e-50 | -8.615850e-47 |
| Msa0565180 | Msa1422230 | 0.824972 | 6.041727e-54 | -8.615850e-47 |
| Msa0573950 | Msa1422230 | 0.825959 | 3.526395e-54 | -8.615850e-47 |
| Msa0576560 | Msa1422230 | 0.830078 | 3.594933e-55 | -8.615850e-47 |
| Msa0580840 | Msa1422230 | 0.830456 | 2.906730e-55 | -8.615850e-47 |
| Msa0585060 | Msa1422230 | 0.809652 | 1.702507e-50 | -8.615850e-47 |
| Msa0588710 | Msa1422230 | 0.807795 | 4.244071e-50 | -8.615850e-47 |
| Msa0590390 | Msa1422230 | 0.818051 | 2.398435e-52 | -8.615850e-47 |
| Msa0590810 | Msa1422230 | 0.810274 | 1.250811e-50 | -8.615850e-47 |
| Msa0859040 | Msa1422230 | 0.805683 | 1.185649e-49 | -8.615850e-47 |
| Msa0863940 | Msa1422230 | 0.830267 | 3.233757e-55 | -8.615850e-47 |
| Msa0865810 | Msa1422230 | 0.822205 | 2.683224e-53 | -8.615850e-47 |
| Msa0865820 | Msa1422230 | 0.832150 | 1.113691e-55 | -8.615850e-47 |
| Msa0865830 | Msa1422230 | 0.810921 | 9.061773e-51 | -8.615850e-47 |
| Msa0874640 | Msa1422230 | 0.833574 | 4.931180e-56 | -8.615850e-47 |
| Msa0881510 | Msa1422230 | 0.806653 | 7.408385e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1422230 | MtrunA17_Chr3g0094671 | 96.000 | 225 | 6 | 2 | 1 | 222 | 1 | 225 | 2.97e-157 | 434 |
| Msa1422230 | MtrunA17_Chr5g0441951 | 60.090 | 223 | 72 | 4 | 1 | 220 | 1 | 209 | 8.50e-87 | 255 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1422230 | AT5G12340.1 | 44.385 | 187 | 94 | 5 | 33 | 209 | 22 | 208 | 1.26e-45 | 151 |
| Msa1422230 | AT5G12340.2 | 44.385 | 187 | 94 | 5 | 33 | 209 | 25 | 211 | 1.29e-45 | 151 |
| Msa1422230 | AT1G28190.1 | 27.094 | 203 | 129 | 6 | 9 | 203 | 25 | 216 | 1.36e-12 | 65.5 |
Find 32 sgRNAs with CRISPR-Local
Find 44 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTAAGCTTGAAACTATTT+TGG | 0.091162 | tig0025352:+70362 | Msa1422230:CDS |
| CGTCAGCTAAGCTTATATTT+TGG | 0.226292 | tig0025352:+69872 | Msa1422230:CDS |
| AACAAGTCAACAATCAAATT+TGG | 0.260285 | tig0025352:+70138 | Msa1422230:CDS |
| TTGCATGAAAAGAGATCAAT+AGG | 0.299018 | tig0025352:-70060 | None:intergenic |
| TTCATCACAAGGCTTGTTAA+TGG | 0.314435 | tig0025352:+70225 | Msa1422230:CDS |
| GCGTGACAAACCATCGTCTC+TGG | 0.356966 | tig0025352:-69955 | None:intergenic |
| TGAAATGCTTGTGAAGTCTA+AGG | 0.382530 | tig0025352:+70326 | Msa1422230:CDS |
| CTTGTTAATGGAGATAGATC+AGG | 0.402456 | tig0025352:+70237 | Msa1422230:CDS |
| CAATCCTTCAAATACTCAAA+AGG | 0.411864 | tig0025352:-70168 | None:intergenic |
| TCCAAAATAGTTTCAAGCTT+AGG | 0.413585 | tig0025352:-70363 | None:intergenic |
| TTAGAAGACGAACTCTTTCA+AGG | 0.441583 | tig0025352:+70018 | Msa1422230:CDS |
| GCTTGTGAAGTCTAAGGATC+AGG | 0.441885 | tig0025352:+70332 | Msa1422230:CDS |
| TATCTAGCATACACAGTTTG+TGG | 0.453920 | tig0025352:-70432 | None:intergenic |
| TCGTCTTCTAAATCCAAACT+AGG | 0.463904 | tig0025352:-70006 | None:intergenic |
| TGATGGAAAAGTGTTGATAA+AGG | 0.464603 | tig0025352:+70191 | Msa1422230:CDS |
| AAACAAGGTTAGACTTAGAA+AGG | 0.491346 | tig0025352:+70386 | Msa1422230:CDS |
| CTAAATCCAAACTAGGGATC+GGG | 0.491708 | tig0025352:-69999 | None:intergenic |
| AATCCTTCAAATACTCAAAA+GGG | 0.496327 | tig0025352:-70167 | None:intergenic |
| TGAAGTCTAAGGATCAGGTT+TGG | 0.505035 | tig0025352:+70337 | Msa1422230:CDS |
| TCTAAATCCAAACTAGGGAT+CGG | 0.527145 | tig0025352:-70000 | None:intergenic |
| ACAAGCCTTGTGATGAACTC+TGG | 0.550575 | tig0025352:-70219 | None:intergenic |
| CGTGACAAACCATCGTCTCT+GGG | 0.573900 | tig0025352:-69954 | None:intergenic |
| GGTTCCACGAGATTGCTAAA+CGG | 0.584296 | tig0025352:+69898 | Msa1422230:CDS |
| CGTCTTCTAAATCCAAACTA+GGG | 0.587535 | tig0025352:-70005 | None:intergenic |
| TTGTTAATGGAGATAGATCA+GGG | 0.611228 | tig0025352:+70238 | Msa1422230:CDS |
| TCAACTCAGGGGTACTACAA+AGG | 0.612009 | tig0025352:-70293 | None:intergenic |
| GAGTATTTGAAGGATTGTGA+TGG | 0.613286 | tig0025352:+70174 | Msa1422230:CDS |
| TGCATGAAAAGAGATCAATA+GGG | 0.622739 | tig0025352:-70059 | None:intergenic |
| AATATAAGCTTAGCTGACGA+TGG | 0.633636 | tig0025352:-69868 | None:intergenic |
| CTTACCGTTTAGCAATCTCG+TGG | 0.635041 | tig0025352:-69902 | None:intergenic |
| GTTCGAGTACCCAGAGACGA+TGG | 0.655665 | tig0025352:+69945 | Msa1422230:CDS |
| TTATGCCAGAGTTCATCACA+AGG | 0.712497 | tig0025352:+70214 | Msa1422230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATGATAATTTTCTGTTTTG+AGG | - | tig0025352:69823-69842 | None:intergenic | 25.0% |
| ! | AACAAGTCAACAATCAAATT+TGG | + | tig0025352:70138-70157 | Msa1422230:CDS | 25.0% |
| ! | AATCCTTCAAATACTCAAAA+GGG | - | tig0025352:70170-70189 | None:intergenic | 25.0% |
| !!! | ATAATGTTTTTTCAACTCAG+GGG | - | tig0025352:70307-70326 | None:intergenic | 25.0% |
| !!! | CATAATGTTTTTTCAACTCA+GGG | - | tig0025352:70308-70327 | None:intergenic | 25.0% |
| !!! | TCATAATGTTTTTTCAACTC+AGG | - | tig0025352:70309-70328 | None:intergenic | 25.0% |
| !!! | TGAAACTATTTTGGAAAACA+AGG | + | tig0025352:70371-70390 | Msa1422230:CDS | 25.0% |
| TGCATGAAAAGAGATCAATA+GGG | - | tig0025352:70062-70081 | None:intergenic | 30.0% | |
| TTGCATGAAAAGAGATCAAT+AGG | - | tig0025352:70063-70082 | None:intergenic | 30.0% | |
| CAATCCTTCAAATACTCAAA+AGG | - | tig0025352:70171-70190 | None:intergenic | 30.0% | |
| !! | TGATGGAAAAGTGTTGATAA+AGG | + | tig0025352:70191-70210 | Msa1422230:CDS | 30.0% |
| TTGTTAATGGAGATAGATCA+GGG | + | tig0025352:70238-70257 | Msa1422230:CDS | 30.0% | |
| ! | TCCTAAGCTTGAAACTATTT+TGG | + | tig0025352:70362-70381 | Msa1422230:CDS | 30.0% |
| TCCAAAATAGTTTCAAGCTT+AGG | - | tig0025352:70366-70385 | None:intergenic | 30.0% | |
| AAACAAGGTTAGACTTAGAA+AGG | + | tig0025352:70386-70405 | Msa1422230:CDS | 30.0% | |
| AAAGGAGAGAAAAAGAGAAA+AGG | + | tig0025352:70404-70423 | Msa1422230:CDS | 30.0% | |
| !!! | CTGTTTTGAGGATGAAAACA+TGG | - | tig0025352:69811-69830 | None:intergenic | 35.0% |
| AATATAAGCTTAGCTGACGA+TGG | - | tig0025352:69871-69890 | None:intergenic | 35.0% | |
| ! | CGTCAGCTAAGCTTATATTT+TGG | + | tig0025352:69872-69891 | Msa1422230:CDS | 35.0% |
| !!! | GCTAAGCTTATATTTTGGCA+AGG | + | tig0025352:69877-69896 | Msa1422230:CDS | 35.0% |
| TCTAAATCCAAACTAGGGAT+CGG | - | tig0025352:70003-70022 | None:intergenic | 35.0% | |
| CGTCTTCTAAATCCAAACTA+GGG | - | tig0025352:70008-70027 | None:intergenic | 35.0% | |
| TCGTCTTCTAAATCCAAACT+AGG | - | tig0025352:70009-70028 | None:intergenic | 35.0% | |
| TTAGAAGACGAACTCTTTCA+AGG | + | tig0025352:70018-70037 | Msa1422230:CDS | 35.0% | |
| GAGTATTTGAAGGATTGTGA+TGG | + | tig0025352:70174-70193 | Msa1422230:CDS | 35.0% | |
| !! | TTCATCACAAGGCTTGTTAA+TGG | + | tig0025352:70225-70244 | Msa1422230:CDS | 35.0% |
| CTTGTTAATGGAGATAGATC+AGG | + | tig0025352:70237-70256 | Msa1422230:CDS | 35.0% | |
| TGAAATGCTTGTGAAGTCTA+AGG | + | tig0025352:70326-70345 | Msa1422230:CDS | 35.0% | |
| TATCTAGCATACACAGTTTG+TGG | - | tig0025352:70435-70454 | None:intergenic | 35.0% | |
| CTAAATCCAAACTAGGGATC+GGG | - | tig0025352:70002-70021 | None:intergenic | 40.0% | |
| !! | GTGCCCTTTTGAGTATTTGA+AGG | + | tig0025352:70164-70183 | Msa1422230:CDS | 40.0% |
| TTATGCCAGAGTTCATCACA+AGG | + | tig0025352:70214-70233 | Msa1422230:CDS | 40.0% | |
| TGAAGTCTAAGGATCAGGTT+TGG | + | tig0025352:70337-70356 | Msa1422230:CDS | 40.0% | |
| GGTTCCACGAGATTGCTAAA+CGG | + | tig0025352:69898-69917 | Msa1422230:CDS | 45.0% | |
| CTTACCGTTTAGCAATCTCG+TGG | - | tig0025352:69905-69924 | None:intergenic | 45.0% | |
| !!! | CACGCTGACTCGTTTTTCAT+CGG | + | tig0025352:69973-69992 | Msa1422230:CDS | 45.0% |
| ! | ACAAGCCTTGTGATGAACTC+TGG | - | tig0025352:70222-70241 | None:intergenic | 45.0% |
| !! | TCAACTCAGGGGTACTACAA+AGG | - | tig0025352:70296-70315 | None:intergenic | 45.0% |
| GCTTGTGAAGTCTAAGGATC+AGG | + | tig0025352:70332-70351 | Msa1422230:CDS | 45.0% | |
| CTAAACGGTAAGCACATCGC+TGG | + | tig0025352:69913-69932 | Msa1422230:CDS | 50.0% | |
| CGTGACAAACCATCGTCTCT+GGG | - | tig0025352:69957-69976 | None:intergenic | 50.0% | |
| GTTCGAGTACCCAGAGACGA+TGG | + | tig0025352:69945-69964 | Msa1422230:CDS | 55.0% | |
| GCGTGACAAACCATCGTCTC+TGG | - | tig0025352:69958-69977 | None:intergenic | 55.0% | |
| CGGACACCCGATCCCTAGTT+TGG | + | tig0025352:69993-70012 | Msa1422230:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0025352 | gene | 69787 | 70455 | 69787 | ID=Msa1422230;Name=Msa1422230 |
| tig0025352 | mRNA | 69787 | 70455 | 69787 | ID=Msa1422230-mRNA-1;Parent=Msa1422230;Name=Msa1422230-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|222 |
| tig0025352 | exon | 69787 | 70455 | 69787 | ID=Msa1422230-mRNA-1:exon:2452;Parent=Msa1422230-mRNA-1 |
| tig0025352 | CDS | 69787 | 70455 | 69787 | ID=Msa1422230-mRNA-1:cds;Parent=Msa1422230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
