AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1183750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1183750 MtrunA17_Chr8g0335531 88.718 195 14 1 135 329 1 187 2.19e-109 316
Msa1183750 MtrunA17_Chr8g0335531 64.211 190 8 3 1 135 1 185 2.81e-55 178
Msa1183750 MtrunA17_Chr8g0335571 87.940 199 20 1 135 329 1 199 2.44e-103 301
Msa1183750 MtrunA17_Chr8g0335571 62.944 197 11 3 1 135 1 197 8.90e-45 151
Msa1183750 MtrunA17_Chr3g0132441 57.265 117 46 3 139 254 7 120 3.83e-35 126
Msa1183750 MtrunA17_Chr3g0132431 47.552 143 67 4 133 270 1 140 7.58e-33 120
Msa1183750 MtrunA17_Chr3g0132411 49.231 130 62 3 136 264 43 169 1.92e-31 116
Msa1183750 MtrunA17_Chr3g0132511 51.261 119 54 4 138 254 6 122 1.69e-29 112
Msa1183750 MtrunA17_Chr2g0323021 38.065 155 92 3 133 286 1 152 5.51e-29 111
Msa1183750 MtrunA17_Chr5g0394321 35.152 165 96 4 133 294 1 157 2.41e-28 108
Msa1183750 MtrunA17_Chr1g0205701 34.211 152 95 3 145 293 12 161 8.84e-27 104
Msa1183750 MtrunA17_Chr3g0132701 46.377 138 58 5 138 261 6 141 2.52e-25 101
Msa1183750 MtrunA17_Chr1g0196801 37.037 135 82 2 155 289 20 151 6.67e-25 99.0
Msa1183750 MtrunA17_Chr6g0481491 40.164 122 68 2 140 258 7 126 2.09e-22 93.2
Msa1183750 MtrunA17_Chr6g0459441 46.602 103 52 2 153 254 21 121 7.31e-22 90.9
Msa1183750 MtrunA17_Chr1g0211101 36.306 157 90 6 136 286 9 161 1.48e-21 90.1
Msa1183750 MtrunA17_Chr4g0064041 43.284 134 64 5 144 267 10 141 3.28e-21 93.2
Msa1183750 MtrunA17_Chr4g0064041 46.078 102 48 3 158 254 191 290 1.23e-20 91.3
Msa1183750 MtrunA17_Chr7g0253641 43.269 104 56 2 153 255 21 122 1.75e-20 88.6
Msa1183750 MtrunA17_Chr7g0253681 38.655 119 71 2 139 256 8 125 1.50e-19 84.3
Msa1183750 MtrunA17_Chr2g0301431 41.667 120 62 5 137 253 9 123 1.57e-19 83.2
Msa1183750 MtrunA17_Chr7g0253701 38.655 119 70 3 139 256 8 124 6.93e-19 82.4
Msa1183750 MtrunA17_Chr7g0253671 38.655 119 70 3 139 256 8 124 6.93e-19 82.4
Msa1183750 MtrunA17_Chr1g0177341 36.937 111 68 2 146 255 13 122 3.14e-18 80.5
Msa1183750 MtrunA17_Chr1g0177331 36.937 111 68 2 146 255 13 122 3.14e-18 80.5
Msa1183750 MtrunA17_Chr2g0331181 36.029 136 75 4 155 281 24 156 8.37e-18 80.1
Msa1183750 MtrunA17_Chr4g0040291 32.934 167 103 3 155 318 22 182 1.05e-17 79.7
Msa1183750 MtrunA17_Chr7g0253631 38.136 118 65 3 138 254 11 121 2.16e-17 80.1
Msa1183750 MtrunA17_Chr8g0380901 36.290 124 73 4 131 253 1 119 3.11e-17 76.6
Msa1183750 MtrunA17_Chr3g0125761 37.500 120 69 4 135 253 10 124 3.43e-17 76.6
Msa1183750 MtrunA17_Chr8g0360371 37.594 133 72 6 140 264 5 134 4.56e-17 80.5
Msa1183750 MtrunA17_Chr3g0136871 34.722 144 79 4 174 316 48 177 1.28e-16 76.6
Msa1183750 MtrunA17_Chr6g0453921 35.211 142 80 5 144 283 24 155 1.29e-16 76.6
Msa1183750 MtrunA17_Chr6g0453801 30.488 164 105 5 131 287 6 167 2.24e-16 75.9
Msa1183750 MtrunA17_Chr1g0150131 34.965 143 84 4 141 276 7 147 3.03e-16 75.9
Msa1183750 MtrunA17_Chr2g0306461 37.190 121 66 4 144 256 9 127 3.06e-16 76.3
Msa1183750 MtrunA17_Chr3g0125791 41.346 104 55 4 153 255 28 126 4.24e-16 73.6
Msa1183750 MtrunA17_Chr6g0483981 36.025 161 93 5 155 308 24 181 5.82e-16 78.6
Msa1183750 MtrunA17_Chr7g0253731 32.800 125 81 3 133 256 1 123 1.06e-15 73.6
Msa1183750 MtrunA17_Chr4g0001571 38.614 101 58 3 155 254 26 123 1.68e-15 73.2
Msa1183750 MtrunA17_Chr7g0253761 35.593 118 68 3 138 254 11 121 3.03e-15 72.8
Msa1183750 MtrunA17_Chr4g0073901 33.607 122 73 4 139 254 10 129 4.06e-15 72.4
Msa1183750 MtrunA17_Chr2g0324721 34.254 181 96 7 155 318 24 198 4.14e-15 72.8
Msa1183750 MtrunA17_Chr4g0033131 38.393 112 58 5 155 258 25 133 4.43e-14 69.3
Msa1183750 MtrunA17_Chr4g0033531 38.393 112 58 5 155 258 25 133 4.43e-14 69.3
Msa1183750 MtrunA17_Chr4g0073921 33.600 125 75 4 139 257 10 132 1.80e-13 69.7
Msa1183750 MtrunA17_Chr4g0041811 30.357 224 124 7 128 325 1 218 2.11e-13 68.6
Msa1183750 MtrunA17_Chr2g0289741 33.333 126 77 4 159 282 28 148 4.90e-13 66.6
Msa1183750 MtrunA17_Chr4g0064031 38.144 97 52 5 155 243 25 121 9.44e-13 65.5
Msa1183750 MtrunA17_Chr2g0324711 32.143 168 98 7 139 298 8 167 1.27e-12 67.8
Msa1183750 MtrunA17_Chr8g0387804 39.048 105 56 4 155 254 26 127 1.43e-12 63.9
Msa1183750 MtrunA17_Chr4g0039721 30.714 140 88 3 155 286 29 167 2.64e-12 64.7
Msa1183750 MtrunA17_Chr8g0380711 37.624 101 56 5 155 253 25 120 4.40e-12 62.4
Msa1183750 MtrunA17_Chr8g0385031 33.929 168 98 6 139 297 7 170 6.33e-12 65.5
Msa1183750 MtrunA17_Chr6g0453791 33.594 128 76 5 160 286 33 152 1.94e-11 62.0
Msa1183750 MtrunA17_Chr2g0317231 36.364 143 78 6 158 292 25 162 2.80e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1183750 AT2G44790.1 53.704 108 46 1 151 258 25 128 1.25e-33 123
Msa1183750 AT3G60270.1 52.336 107 49 1 151 257 19 123 8.36e-33 120
Msa1183750 AT3G60280.1 53.271 107 48 1 151 257 17 121 2.22e-32 120
Msa1183750 AT2G32300.1 50.847 118 51 3 155 267 23 138 1.93e-31 119
Msa1183750 AT2G32300.2 45.270 148 68 4 155 301 53 188 5.41e-31 119
Msa1183750 AT1G72230.1 45.513 156 77 4 136 287 3 154 5.92e-30 112
Msa1183750 AT3G27200.1 41.803 122 68 2 135 255 3 122 1.85e-26 103
Msa1183750 AT5G07475.1 38.514 148 84 2 137 279 4 149 1.03e-25 102
Msa1183750 AT2G31050.1 40.278 144 81 4 131 271 1 142 3.11e-25 100
Msa1183750 AT2G26720.1 39.706 136 73 4 143 271 9 142 5.93e-24 97.8
Msa1183750 AT1G22480.1 47.154 123 63 1 166 288 27 147 6.63e-24 96.7
Msa1183750 AT5G26330.1 36.290 124 74 3 135 255 1 122 9.78e-23 94.0
Msa1183750 AT5G53870.2 33.871 186 106 7 119 300 1 173 1.74e-19 88.6
Msa1183750 AT5G53870.1 33.871 186 106 7 119 300 1 173 2.02e-19 88.2
Msa1183750 AT3G17675.1 37.778 135 74 4 121 254 2 127 2.15e-19 83.2
Msa1183750 AT2G25060.1 38.636 132 70 5 142 264 15 144 3.73e-18 81.3
Msa1183750 AT5G20230.1 36.364 176 98 7 157 324 24 193 1.40e-17 80.1
Msa1183750 AT5G15350.1 34.483 145 72 5 140 272 1 134 1.91e-16 76.3
Msa1183750 AT4G31840.1 29.703 202 102 9 136 328 3 173 2.21e-16 76.3
Msa1183750 AT1G79800.1 36.585 123 70 3 156 273 32 151 3.72e-16 76.3
Msa1183750 AT2G02850.1 39.286 112 62 4 145 255 23 129 5.53e-16 73.9
Msa1183750 AT4G12880.1 37.500 128 69 6 135 254 1 125 8.28e-16 73.9
Msa1183750 AT4G28365.1 31.818 176 108 7 131 298 1 172 1.19e-15 74.7
Msa1183750 AT4G27520.1 35.246 122 70 4 143 257 12 131 1.58e-15 77.0
Msa1183750 AT4G30590.1 44.578 83 43 2 175 256 50 130 5.07e-15 72.8
Msa1183750 AT1G64640.1 36.111 108 65 2 155 258 30 137 1.50e-14 71.6
Msa1183750 AT5G57920.1 33.333 99 63 2 173 270 43 139 3.01e-14 70.5
Msa1183750 AT5G57920.3 33.333 99 63 2 173 270 75 171 4.91e-14 70.5
Msa1183750 AT3G20570.1 33.333 132 80 4 131 256 1 130 5.10e-14 70.5
Msa1183750 AT5G57920.2 33.333 99 63 2 173 270 42 138 6.00e-14 69.7
Msa1183750 AT3G53330.1 34.400 125 76 4 154 274 184 306 1.30e-12 67.8
Msa1183750 AT1G48940.1 32.283 127 77 4 133 252 1 125 1.34e-11 62.8
Msa1183750 AT2G27035.1 31.783 129 74 5 161 287 32 148 1.83e-11 62.0
Msa1183750 AT3G18590.1 33.333 123 73 3 139 255 8 127 7.57e-11 60.8

Find 75 sgRNAs with CRISPR-Local

Find 518 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGTTTCAGCAATGATTT+TGG 0.095923 8_1:-19120923 Msa1183750:CDS
CTTTGTTTCAGCAATGATTT+TGG 0.095923 8_1:-19129645 Msa1183750:CDS
TCCATCAGCATAGTTCTTTA+TGG 0.149502 8_1:+19121239 None:intergenic
GTTGTTTCCATTTCAATTAT+TGG 0.194435 8_1:+19120712 None:intergenic
TTCTTTCTTTGTTCTATTGT+TGG 0.249783 8_1:-19121687 Msa1183750:CDS
CACCATAATTTATGTACTAT+TGG 0.264888 8_1:-19120862 Msa1183750:three_prime_UTR
AACCAATAGTACATAAATTA+TGG 0.310625 8_1:+19120860 None:intergenic
GATTACACCAAATGGGCTTC+TGG 0.335655 8_1:-19121599 Msa1183750:CDS
CCATCACCACCAAAGGATAA+TGG 0.368895 8_1:-19120991 Msa1183750:CDS
CCATCACCACCAAAGGATAA+TGG 0.368895 8_1:-19129713 Msa1183750:CDS
CTATGCTGATGGAAATTCTA+AGG 0.389114 8_1:-19121229 Msa1183750:CDS
ACTCCATCAACAACTCCTTC+AGG 0.392365 8_1:-19129752 Msa1183750:CDS
TTGGTTGCCAATAATTGAAA+TGG 0.395366 8_1:-19120719 Msa1183750:three_prime_UTR
CACTCAAATAAGAATTTACT+AGG 0.396468 8_1:-19120681 Msa1183750:three_prime_UTR
GTCCCTGAAGGAGTTGTTGA+TGG 0.397137 8_1:+19129749 None:intergenic
CCATTATCCTTTGGTGGTGA+TGG 0.426718 8_1:+19120991 None:intergenic
CCATTATCCTTTGGTGGTGA+TGG 0.426718 8_1:+19129713 None:intergenic
AAGGAGTTGATTACACCAAA+TGG 0.428315 8_1:-19121607 Msa1183750:CDS
GGAGCTGATGGTGTGGTTGA+TGG 0.434928 8_1:+19121036 None:intergenic
GTTGTTGATGGAGTAGTTGA+TGG 0.440380 8_1:+19129761 None:intergenic
GGTGCCACTTGGAGTTGGGG+TGG 0.440747 8_1:+19121101 None:intergenic
CTAACAGCTCCATTATCCTT+TGG 0.447592 8_1:+19120982 None:intergenic
CTAACAGCTCCATTATCCTT+TGG 0.447592 8_1:+19129704 None:intergenic
TTCAAAGTTGGTGATAACTT+AGG 0.466246 8_1:-19121569 Msa1183750:intron
GTAGTTGATGGTGTGGTTGA+TGG 0.466465 8_1:+19121060 None:intergenic
GTGGTTGATGGAGTAGTTGA+TGG 0.471972 8_1:+19121048 None:intergenic
AAGGTTGCATTGACTAAAGC+AGG 0.472415 8_1:-19121210 Msa1183750:CDS
GGTACCACTTGGAGTTGGGG+TGG 0.472947 8_1:+19129814 None:intergenic
AAATCAGTTGCAAATGCATA+AGG 0.473584 8_1:+19121659 None:intergenic
AAATCAGTTGCAAATGCATA+AGG 0.473584 8_1:+19130370 None:intergenic
ATTGGCAACCAAACAACAAA+AGG 0.482887 8_1:+19120730 None:intergenic
CATCAACTTCATTCACTTGG+TGG 0.484952 8_1:+19130008 None:intergenic
CTCCATCAACAACTCCTTCA+GGG 0.489544 8_1:-19129751 Msa1183750:CDS
CCAGGTCATTGTACTAGTAC+TGG 0.496658 8_1:-19121162 Msa1183750:CDS
CCAGGTCATTGTACTAGTAC+TGG 0.496658 8_1:-19129875 Msa1183750:intron
CATCAACTTCATCCACTTGG+TGG 0.497098 8_1:+19121295 None:intergenic
GAAGTTGAGTTTGTCTCTGA+AGG 0.503772 8_1:+19121015 None:intergenic
AGGAGTTGATTACACCAAAT+GGG 0.504844 8_1:-19121606 Msa1183750:CDS
TACTTCATATGCCCTACTCC+AGG 0.512113 8_1:-19121180 Msa1183750:CDS
AACTCCTTGATTCCATCCAC+TGG 0.514824 8_1:+19121622 None:intergenic
TTTGCAACTGATTTCACTGT+TGG 0.522709 8_1:-19121650 Msa1183750:CDS
TTTGCAACTGATTTCACTGT+TGG 0.522709 8_1:-19130361 Msa1183750:CDS
GAAGTTGAGTTTGTCCCTGA+AGG 0.522749 8_1:+19129737 None:intergenic
ACAGCTCCATTATCCTTTGG+TGG 0.526576 8_1:+19120985 None:intergenic
ACAGCTCCATTATCCTTTGG+TGG 0.526576 8_1:+19129707 None:intergenic
AACTTCATTCACTTGGTGGA+AGG 0.528629 8_1:+19130012 None:intergenic
CTAGTACAATGACCTGGAGT+AGG 0.540305 8_1:+19121168 None:intergenic
TTTGTCTCTGAAGGAGCTGA+TGG 0.541698 8_1:+19121024 None:intergenic
CATCAAAAGACTAACACCAT+TGG 0.545497 8_1:+19120954 None:intergenic
CATCAAAAGACTAACACCAT+TGG 0.545497 8_1:+19129676 None:intergenic
CTCTGAAGGAGCTGATGGTG+TGG 0.549422 8_1:+19121029 None:intergenic
TTTCATCAACTTCATTCACT+TGG 0.552459 8_1:+19130005 None:intergenic
GTGAATGAAGTTGATGAAAG+TGG 0.554625 8_1:-19130001 Msa1183750:CDS
TTCACTGTTGGTGATGCCAG+TGG 0.555149 8_1:-19121638 Msa1183750:CDS
GCCATAAAGAACTATGCTGA+TGG 0.555563 8_1:-19121240 Msa1183750:CDS
TTTCATCAACTTCATCCACT+TGG 0.560272 8_1:+19121292 None:intergenic
AACTTCATCCACTTGGTGGA+AGG 0.561488 8_1:+19121299 None:intergenic
AACTTCTCCATCACCACCAA+AGG 0.566009 8_1:-19120998 Msa1183750:CDS
AACTTCTCCATCACCACCAA+AGG 0.566009 8_1:-19129720 Msa1183750:CDS
TGATGGAGTAGTTGATGGTG+TGG 0.574696 8_1:+19121053 None:intergenic
GATGCCAGTGGATGGAATCA+AGG 0.575971 8_1:-19121626 Msa1183750:CDS
CTGTTGGTGATGCCAGTGGA+TGG 0.591217 8_1:-19121634 Msa1183750:CDS
TAGTACAATGACCTGGAGTA+GGG 0.606340 8_1:+19121169 None:intergenic
GTAGTTGATGGAGTGCCACT+TGG 0.611661 8_1:+19129773 None:intergenic
AGCACCACCCCAACTCCAAG+TGG 0.615986 8_1:-19121105 Msa1183750:CDS
AGTTGCAAATGCATAAGGAA+AGG 0.617334 8_1:+19121664 None:intergenic
CCAGTACTAGTACAATGACC+TGG 0.623789 8_1:+19121162 None:intergenic
ATATGGCTCCTTCCACCAAG+TGG 0.625567 8_1:-19121307 Msa1183750:CDS
CCACCAACAAAATCTCCAAG+TGG 0.631426 8_1:-19129788 Msa1183750:CDS
AGCACCACCCCAACTCCAAG+TGG 0.637196 8_1:-19129818 Msa1183750:CDS
GCAACCAAACAACAAAAGGA+AGG 0.640439 8_1:+19120734 None:intergenic
GGTCATTGTACTAGTACTGG+TGG 0.645353 8_1:-19121159 Msa1183750:CDS
GGTCATTGTACTAGTACTGG+TGG 0.645353 8_1:-19129872 Msa1183750:CDS
GGAGCTGTTAGTGTTTCCAA+TGG 0.664368 8_1:-19120970 Msa1183750:CDS
GGAGCTGTTAGTGTTTCCAA+TGG 0.664368 8_1:-19129692 Msa1183750:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATATTAAAAAATTA+TGG + chr8_1:19126398-19126417 None:intergenic 0.0%
!! AAAAATTAATAAAAAAATTA+TGG + chr8_1:19126572-19126591 None:intergenic 0.0%
!!! TATATATATATATTTTTTAT+TGG + chr8_1:19127841-19127860 None:intergenic 0.0%
!!! TTTTATTTTTTTTATAAGCA+AGG - chr8_1:19120840-19120859 Msa1183750:three_prime_UTR 10.0%
!! TAAAAAAGATTAAAAAATTC+TGG - chr8_1:19125767-19125786 Msa1183750:intron 10.0%
!! ATGTAAAAAATTGAAAAAAA+CGG + chr8_1:19126354-19126373 None:intergenic 10.0%
!! AAAAAAATATTAGAAAATTC+TGG + chr8_1:19126448-19126467 None:intergenic 10.0%
!!! CAATTTATTTTTAAAGTTTT+TGG + chr8_1:19126681-19126700 None:intergenic 10.0%
!!! AAGTCAATTATTTAATTTAT+TGG + chr8_1:19128224-19128243 None:intergenic 10.0%
!! AATTAAATTTAAATTCAACA+TGG - chr8_1:19129169-19129188 Msa1183750:intron 10.0%
!!! ATATTATGTTTTTTCTTATT+TGG - chr8_1:19129597-19129616 Msa1183750:intron 10.0%
!!! ATGTTTTCTTTTTTAATTAA+AGG + chr8_1:19130285-19130304 None:intergenic 10.0%
!!! TTGATCTCTTTTTTAATTAA+AGG + chr8_1:19121586-19121605 None:intergenic 15.0%
!! TGCATAATTAAATGAAAATT+TGG - chr8_1:19123781-19123800 Msa1183750:intron 15.0%
!! GCATAATTAAATGAAAATTT+GGG - chr8_1:19123782-19123801 Msa1183750:intron 15.0%
!! TCTCTTAAAACAATTATATT+GGG + chr8_1:19124194-19124213 None:intergenic 15.0%
!! ATCTCTTAAAACAATTATAT+TGG + chr8_1:19124195-19124214 None:intergenic 15.0%
!! AAATAACTGAAATATAAACT+TGG + chr8_1:19124534-19124553 None:intergenic 15.0%
!!! CAAAATTTTTTTATAGCTTT+TGG - chr8_1:19125427-19125446 Msa1183750:intron 15.0%
!!! CAAATTTTTTTTATAGCTTT+TGG - chr8_1:19125488-19125507 Msa1183750:intron 15.0%
!! AACTATAAAAAAAATTTGCA+GGG + chr8_1:19125547-19125566 None:intergenic 15.0%
!! AAACTATAAAAAAAATTTGC+AGG + chr8_1:19125548-19125567 None:intergenic 15.0%
!! GGAAAAAATAAAAAAAAATC+TGG - chr8_1:19125738-19125757 Msa1183750:intron 15.0%
!!! CGAAAATAAAAATGAAATTT+TGG - chr8_1:19125908-19125927 Msa1183750:intron 15.0%
!! AGTATTTCTCAAAAAAATTT+CGG - chr8_1:19125971-19125990 Msa1183750:intron 15.0%
!!! ATTTTCATTAGTATTTTTTC+CGG - chr8_1:19126055-19126074 Msa1183750:intron 15.0%
!!! ATTTTTGTGTATTTATAAAG+CGG - chr8_1:19126080-19126099 Msa1183750:intron 15.0%
!! TGAAAATAATGAAAAAATTC+TGG + chr8_1:19126259-19126278 None:intergenic 15.0%
!! CGGAAAAAATTAAAAAAATT+TGG + chr8_1:19126334-19126353 None:intergenic 15.0%
!! AAAAATTATAAAAGATTTGC+AGG - chr8_1:19126621-19126640 Msa1183750:intron 15.0%
!! AAAATTATAAAAGATTTGCA+GGG - chr8_1:19126622-19126641 Msa1183750:intron 15.0%
!!! AAACTTTAAAAATAAATTGC+AGG - chr8_1:19126682-19126701 Msa1183750:intron 15.0%
!!! AACTTTAAAAATAAATTGCA+GGG - chr8_1:19126683-19126702 Msa1183750:intron 15.0%
!!! CAAATTTTTTTTATAGCTTT+TGG + chr8_1:19125488-19125507 None:intergenic 15.0%
!!! CAAATTTTTTTTATAGCTTT+TGG + chr8_1:19125488-19125507 None:intergenic 15.0%
!! TATTCAAGTAATCTTAATAA+TGG + chr8_1:19126984-19127003 None:intergenic 15.0%
!!! CATTTTGAATTTTGATTATA+AGG - chr8_1:19127308-19127327 Msa1183750:intron 15.0%
!! TAACATCTTTGATTATTTAT+CGG + chr8_1:19127580-19127599 None:intergenic 15.0%
!!! TTATTTTGCATTTATGATAA+TGG - chr8_1:19128497-19128516 Msa1183750:intron 15.0%
!!! TAAATATTTTTGTCAAGTAT+CGG + chr8_1:19128532-19128551 None:intergenic 15.0%
!! AACAATATATAATATATGCA+AGG - chr8_1:19128784-19128803 Msa1183750:intron 15.0%
!!! TTTTGAGAATTAAAGTTTAT+AGG - chr8_1:19129345-19129364 Msa1183750:intron 15.0%
!!! TATATCAAACTTTTTCAATG+TGG + chr8_1:19120931-19120950 None:intergenic 20.0%
!! GAAAAAACAGTGTTTAAATA+TGG - chr8_1:19121039-19121058 Msa1183750:CDS 20.0%
!! CATCTTAATTTATGTATTCT+TGG - chr8_1:19121492-19121511 Msa1183750:intron 20.0%
!!! AAATTCTTCAAAATCTTTTG+AGG + chr8_1:19121847-19121866 None:intergenic 20.0%
!!! TTTTAAATCCAATTTGAATC+AGG + chr8_1:19122992-19123011 None:intergenic 20.0%
!! ATTTATGTTGTTCTATCTAA+CGG - chr8_1:19124251-19124270 Msa1183750:intron 20.0%
!! GATAGTGATAATTGAATTAA+CGG - chr8_1:19124299-19124318 Msa1183750:intron 20.0%
!! ACGAATTAACAAATTAACTT+AGG + chr8_1:19124410-19124429 None:intergenic 20.0%
!!! ATAATTTTAGAGAAATGACT+AGG + chr8_1:19124504-19124523 None:intergenic 20.0%
!! TTTAAGAGGTAAGTAAATAA+GGG + chr8_1:19124598-19124617 None:intergenic 20.0%
!! ATTTAAGAGGTAAGTAAATA+AGG + chr8_1:19124599-19124618 None:intergenic 20.0%
!! CAATTTCATTAACATTTAAG+AGG + chr8_1:19124612-19124631 None:intergenic 20.0%
!!! TTGACAAATTTGTTTACTTA+AGG - chr8_1:19125154-19125173 Msa1183750:intron 20.0%
!!! TGACAAATTTGTTTACTTAA+GGG - chr8_1:19125155-19125174 Msa1183750:intron 20.0%
!! TTGTTAGGATTATGAATTAA+TGG - chr8_1:19125197-19125216 Msa1183750:intron 20.0%
!! TGTTAGGATTATGAATTAAT+GGG - chr8_1:19125198-19125217 Msa1183750:intron 20.0%
!!! TTTATAATTCGTTTTACTTG+TGG - chr8_1:19125265-19125284 Msa1183750:intron 20.0%
!!! TGTAAAATCTCTTTTCATTA+AGG - chr8_1:19125350-19125369 Msa1183750:intron 20.0%
!!! TTTTCATTAAGGCTAAAATA+TGG - chr8_1:19125361-19125380 Msa1183750:intron 20.0%
!!! AGCTATAAAAAAATTTTGCA+GGG + chr8_1:19125425-19125444 None:intergenic 20.0%
!!! AAGCTATAAAAAAATTTTGC+AGG + chr8_1:19125426-19125445 None:intergenic 20.0%
!! AGCTATAAAAAAAATTTGCA+GGG + chr8_1:19126744-19126763 None:intergenic 20.0%
!! AAGCTATAAAAAAAATTTGC+AGG + chr8_1:19126743-19126762 None:intergenic 20.0%
!! GTATTTCTCAAAAAAATTTC+GGG - chr8_1:19125972-19125991 Msa1183750:intron 20.0%
!!! TTTTCATTAGTATTTTTTCC+GGG - chr8_1:19126056-19126075 Msa1183750:intron 20.0%
!! TATAAATACACAAAAATTCC+CGG + chr8_1:19125993-19126012 None:intergenic 20.0%
!!! TTTTTGTGTATTTATAAAGC+GGG - chr8_1:19126081-19126100 Msa1183750:intron 20.0%
!! TATTTATAAACCGAGAATAA+GGG - chr8_1:19126114-19126133 Msa1183750:intron 20.0%
!! AAGCTATAAAAAAAATTTGC+AGG - chr8_1:19126743-19126762 Msa1183750:intron 20.0%
!! AGCTATAAAAAAAATTTGCA+GGG - chr8_1:19126744-19126763 Msa1183750:intron 20.0%
!! AAGCTATAAAAAAAATTTGC+AGG - chr8_1:19126743-19126762 Msa1183750:intron 20.0%
!! AGCTATAAAAAAAATTTGCA+GGG - chr8_1:19126744-19126763 Msa1183750:intron 20.0%
!! ATTAATGAAAGGCTAAAATA+TGG + chr8_1:19126869-19126888 None:intergenic 20.0%
!!! GGTTTTCATTAATTAATGAA+AGG + chr8_1:19126880-19126899 None:intergenic 20.0%
!! GATCAAAAAACAATGATAAA+CGG - chr8_1:19127252-19127271 Msa1183750:intron 20.0%
!!! ACAAACACTTTATTTTCATA+CGG - chr8_1:19127392-19127411 Msa1183750:intron 20.0%
!! AAAAAACGTAAAACATATCA+CGG + chr8_1:19127418-19127437 None:intergenic 20.0%
!! ATTGATCAAAATGAAAATTG+AGG + chr8_1:19127459-19127478 None:intergenic 20.0%
!! TATATATTTCATGATCTTCT+AGG - chr8_1:19127907-19127926 Msa1183750:intron 20.0%
!!! GTTATTTTTTGACAAACTTA+CGG - chr8_1:19128295-19128314 Msa1183750:intron 20.0%
!! CATTGTATTCTAATTTCTAA+AGG + chr8_1:19129078-19129097 None:intergenic 20.0%
!! GAGAAAAAATAATAATGAAG+TGG + chr8_1:19129116-19129135 None:intergenic 20.0%
!!! TATTTTTTCTCTCTCTTTTT+TGG - chr8_1:19129125-19129144 Msa1183750:intron 20.0%
!!! ATTTTTTCTCTCTCTTTTTT+GGG - chr8_1:19129126-19129145 Msa1183750:intron 20.0%
!! TATTTCAGTATATAAACGAA+AGG + chr8_1:19129574-19129593 None:intergenic 20.0%
!! AACCAATAGTACATAAATTA+TGG + chr8_1:19130219-19130238 None:intergenic 20.0%
!!! GAAAACATTTCTTCTTTTTT+AGG - chr8_1:19130297-19130316 Msa1183750:intron 20.0%
!!! TTCTTTCTTTGTTTTGTTGT+TGG - chr8_1:19120678-19120697 Msa1183750:three_prime_UTR 25.0%
!! TTTGTTTCAGCAATGATTTT+GGG - chr8_1:19121432-19121451 Msa1183750:intron 25.0%
!! TCATTTGAGGTACTTATTAT+AGG - chr8_1:19121643-19121662 Msa1183750:CDS 25.0%
!!! ATTAAGATTTTGAGAACTGA+TGG - chr8_1:19121800-19121819 Msa1183750:intron 25.0%
!! ACTTTTAAATGCTTCACATT+TGG + chr8_1:19122107-19122126 None:intergenic 25.0%
! ATTGCTTCTTTGTAATTAAG+TGG + chr8_1:19122563-19122582 None:intergenic 25.0%
! CATTAGATAGCAATAAGAAA+TGG - chr8_1:19122784-19122803 Msa1183750:intron 25.0%
!! TTTCCTTTTACTTCAAATCT+TGG + chr8_1:19122885-19122904 None:intergenic 25.0%
!! AAGATTTGAAGTAAAAGGAA+AGG - chr8_1:19122884-19122903 Msa1183750:intron 25.0%
! CACAACGATATAATTATATG+TGG - chr8_1:19123064-19123083 Msa1183750:intron 25.0%
! CTGATTTAGAAAACTTTCTT+AGG - chr8_1:19123165-19123184 Msa1183750:intron 25.0%
!! TACTATTTGTTGATCCAATA+AGG - chr8_1:19123675-19123694 Msa1183750:intron 25.0%
! TCATTAATATGTCACCTTAT+TGG + chr8_1:19123692-19123711 None:intergenic 25.0%
! TCATACCTTTATTATTTGCT+AGG + chr8_1:19123745-19123764 None:intergenic 25.0%
! TATAAAAGTCACAACACAAA+AGG - chr8_1:19123862-19123881 Msa1183750:intron 25.0%
! TCTAGCTAATTTCTTTGATT+AGG - chr8_1:19124056-19124075 Msa1183750:intron 25.0%
!! AAATAGCCTTTGATGATTAT+AGG - chr8_1:19124325-19124344 Msa1183750:intron 25.0%
! TTAAGAGGTAAGTAAATAAG+GGG + chr8_1:19124597-19124616 None:intergenic 25.0%
! TAATTTAATTCGTATCCACA+GGG + chr8_1:19124656-19124675 None:intergenic 25.0%
! ATAATTTAATTCGTATCCAC+AGG + chr8_1:19124657-19124676 None:intergenic 25.0%
! TTGCTAATTATCTATCACAA+TGG - chr8_1:19124700-19124719 Msa1183750:intron 25.0%
! TTATCAAGTTTCATCTTCAA+AGG + chr8_1:19124967-19124986 None:intergenic 25.0%
! TTACTTATCCAATGTGTTAT+AGG + chr8_1:19125018-19125037 None:intergenic 25.0%
! TAAGTAAACACATTGAAACT+AGG - chr8_1:19125031-19125050 Msa1183750:intron 25.0%
! AAACTAGGTTCTATTTCATT+AGG - chr8_1:19125046-19125065 Msa1183750:intron 25.0%
! AACTAGGTTCTATTTCATTA+GGG - chr8_1:19125047-19125066 Msa1183750:intron 25.0%
! GTTAGGATTATGAATTAATG+GGG - chr8_1:19125199-19125218 Msa1183750:intron 25.0%
! CTAACTCTACTAAATGATTA+TGG + chr8_1:19125244-19125263 None:intergenic 25.0%
!! TTAAGGCTAAAATATGGTTT+TGG - chr8_1:19125367-19125386 Msa1183750:intron 25.0%
! TACATAAAAAAACCTAAGCT+CGG + chr8_1:19126018-19126037 None:intergenic 25.0%
! GTATTTATAAACCGAGAATA+AGG - chr8_1:19126113-19126132 Msa1183750:intron 25.0%
!!! TGTATTTTTTCCCTTATTCT+CGG + chr8_1:19126127-19126146 None:intergenic 25.0%
!!! AAAGTGTTAGAAGTTTGTTA+TGG + chr8_1:19126901-19126920 None:intergenic 25.0%
!! TACAAAATGTTTTCATGAGT+TGG + chr8_1:19127044-19127063 None:intergenic 25.0%
! TTAATCCAATTAGTAGTCAT+TGG + chr8_1:19127125-19127144 None:intergenic 25.0%
! AAGAAATGTAGAAATGATTG+AGG - chr8_1:19127360-19127379 Msa1183750:intron 25.0%
!!! TTCATTTTGATCAATTGAGA+TGG - chr8_1:19127464-19127483 Msa1183750:intron 25.0%
! TTACCATATGATTAAAACAG+AGG - chr8_1:19127617-19127636 Msa1183750:intron 25.0%
! AACATATAACGAACGTATTT+AGG - chr8_1:19127683-19127702 Msa1183750:intron 25.0%
!!! CTCAATTTTTTCATTTGTCA+TGG + chr8_1:19127738-19127757 None:intergenic 25.0%
!!! TACGTTTATTTGACTTGTTT+TGG - chr8_1:19128001-19128020 Msa1183750:intron 25.0%
! TTTATTGGAATGTTTGTTTC+TGG + chr8_1:19128209-19128228 None:intergenic 25.0%
! TAATCATATTCAAGACGTAT+CGG + chr8_1:19128396-19128415 None:intergenic 25.0%
!! TTTCACTTATGCATTTTTCT+TGG - chr8_1:19128572-19128591 Msa1183750:intron 25.0%
! AAGACTCACTTAATTTAGAA+CGG - chr8_1:19128613-19128632 Msa1183750:intron 25.0%
!!! TCAAGAGTATCAAAGTAAAT+TGG - chr8_1:19128711-19128730 Msa1183750:intron 25.0%
! TATATAATATATGCAAGGTC+CGG - chr8_1:19128789-19128808 Msa1183750:intron 25.0%
!!! CTTAACAAGATTTTTTTGCT+AGG + chr8_1:19128824-19128843 None:intergenic 25.0%
!!! GTTAAGAAGTGTCAATTTTA+AGG - chr8_1:19128838-19128857 Msa1183750:intron 25.0%
! ACTAAAACTTATTATTCGTG+GGG + chr8_1:19128866-19128885 None:intergenic 25.0%
! GACTAAAACTTATTATTCGT+GGG + chr8_1:19128867-19128886 None:intergenic 25.0%
! GAAAAAAAAGTTAACCAATG+CGG + chr8_1:19128889-19128908 None:intergenic 25.0%
!!! CCAAGTCACAATTTTTTTAT+GGG - chr8_1:19129021-19129040 Msa1183750:intron 25.0%
! TTCTTTCTTTGTTCTATTGT+TGG - chr8_1:19129389-19129408 Msa1183750:intron 25.0%
!!! GTTTGATAATGCTAAATTTG+AGG - chr8_1:19129633-19129652 Msa1183750:intron 25.0%
! GAAAAAACAGTGTTCAAATA+TGG - chr8_1:19129752-19129771 Msa1183750:CDS 25.0%
!! TTTGTTTCAGCAATGATTTT+GGG - chr8_1:19121432-19121451 Msa1183750:intron 25.0%
! CACCATAATTTATGTACTAT+TGG - chr8_1:19130214-19130233 Msa1183750:intron 25.0%
!! GTTGTTTCCATTTCAATTAT+TGG + chr8_1:19130367-19130386 None:intergenic 25.0%
! CACTCAAATAAGAATTTACT+AGG - chr8_1:19130395-19130414 Msa1183750:CDS 25.0%
AAATCAGTTGCAAATGCATA+AGG + chr8_1:19120709-19120728 None:intergenic 30.0%
! AAGGAGTTGATTATACCAAA+TGG - chr8_1:19120758-19120777 Msa1183750:three_prime_UTR 30.0%
! AGGAGTTGATTATACCAAAT+GGG - chr8_1:19120759-19120778 Msa1183750:three_prime_UTR 30.0%
TCTGGAAAAACATTCAAAGT+TGG - chr8_1:19120784-19120803 Msa1183750:three_prime_UTR 30.0%
!! TTCAAAGTTGGTGATAACTT+AGG - chr8_1:19120796-19120815 Msa1183750:three_prime_UTR 30.0%
!!! TTTTTTATAAGCAAGGAGAG+AGG - chr8_1:19120847-19120866 Msa1183750:three_prime_UTR 30.0%
TTTCATCAACTTCATTCACT+TGG + chr8_1:19121074-19121093 None:intergenic 30.0%
!!! AATGGTGTTAGTCTTTTGAT+GGG - chr8_1:19121402-19121421 Msa1183750:intron 30.0%
!! CTTTGTTTCAGCAATGATTT+TGG - chr8_1:19121431-19121450 Msa1183750:intron 30.0%
ATCATACATTCTGATATACG+TGG - chr8_1:19121619-19121638 Msa1183750:CDS 30.0%
! TTTGAGGTACTTATTATAGG+AGG - chr8_1:19121646-19121665 Msa1183750:CDS 30.0%
! TTGAGGTACTTATTATAGGA+GGG - chr8_1:19121647-19121666 Msa1183750:CDS 30.0%
!!! GAAGAATTTTTTGCTAGAGA+AGG - chr8_1:19121858-19121877 Msa1183750:intron 30.0%
TTCTACTAAGTCATTGTGTT+GGG + chr8_1:19121916-19121935 None:intergenic 30.0%
TTTCTACTAAGTCATTGTGT+TGG + chr8_1:19121917-19121936 None:intergenic 30.0%
AACACAATGACTTAGTAGAA+AGG - chr8_1:19121916-19121935 Msa1183750:intron 30.0%
!! TTTGTTTTCAGCTTCTTTGT+CGG + chr8_1:19122053-19122072 None:intergenic 30.0%
!! CAAAAGTATTAGAAGAAGCT+TGG - chr8_1:19122069-19122088 Msa1183750:intron 30.0%
TGATGATAGAAGTGAGAAAA+TGG - chr8_1:19122178-19122197 Msa1183750:intron 30.0%
! AGTGAGAAAATGGTAATGAT+AGG - chr8_1:19122188-19122207 Msa1183750:intron 30.0%
!!! ATTTGCACCTTTTGAGTTTT+GGG + chr8_1:19122248-19122267 None:intergenic 30.0%
!!! TATTTGCACCTTTTGAGTTT+TGG + chr8_1:19122249-19122268 None:intergenic 30.0%
TAATTAAGTGGTTCAACATC+AGG + chr8_1:19122551-19122570 None:intergenic 30.0%
TACAAAGAAGCAATGCAAAT+AGG - chr8_1:19122569-19122588 Msa1183750:intron 30.0%
!! AGAAAAGCATTGATGTGAAA+TGG - chr8_1:19122675-19122694 Msa1183750:intron 30.0%
!! TGATGTGAAATGGATTTTGA+AGG - chr8_1:19122685-19122704 Msa1183750:intron 30.0%
CAATTTCAAAACACAAAGCA+AGG - chr8_1:19122729-19122748 Msa1183750:intron 30.0%
TATGGTATACAAACTGCATA+AGG - chr8_1:19122911-19122930 Msa1183750:intron 30.0%
AAAAGATGCAAAGCTGAATA+TGG - chr8_1:19123008-19123027 Msa1183750:intron 30.0%
ATTATATGTGGATGACCTAT+TGG - chr8_1:19123076-19123095 Msa1183750:intron 30.0%
GATTACTTTCAGTTACCAAT+AGG + chr8_1:19123094-19123113 None:intergenic 30.0%
! ATGCATCATTAGAAGTACAT+TGG - chr8_1:19123216-19123235 Msa1183750:intron 30.0%
TCTAGCCTAGCAAATAATAA+AGG - chr8_1:19123737-19123756 Msa1183750:intron 30.0%
! AGGATATTCATTCACGTTTT+GGG - chr8_1:19123885-19123904 Msa1183750:intron 30.0%
TTGATAAACGTAAGAGTTTC+AGG + chr8_1:19124118-19124137 None:intergenic 30.0%
TAAGAGGTAAGTAAATAAGG+GGG + chr8_1:19124596-19124615 None:intergenic 30.0%
TATCTATCACAATGGAGAAA+AGG - chr8_1:19124708-19124727 Msa1183750:intron 30.0%
CAATAAGATAATGCAGTAGT+TGG + chr8_1:19124853-19124872 None:intergenic 30.0%
CTAAGAATCCTATAACACAT+TGG - chr8_1:19125007-19125026 Msa1183750:intron 30.0%
TTTGTCAAGCTTCAAAAACT+TGG + chr8_1:19125142-19125161 None:intergenic 30.0%
!!! AAAACTGACCTATTTTTGCA+GGG + chr8_1:19126715-19126734 None:intergenic 30.0%
TGTATTTATAAACCGAGCTT+AGG - chr8_1:19126003-19126022 Msa1183750:intron 30.0%
! ATTTATAAAGCGGGAACTTT+TGG - chr8_1:19126090-19126109 Msa1183750:intron 30.0%
! TTTATAAAGCGGGAACTTTT+GGG - chr8_1:19126091-19126110 Msa1183750:intron 30.0%
TTAGTATATATGTCGAGCTT+AGG + chr8_1:19126159-19126178 None:intergenic 30.0%
ATGTCGAAATTTCGAAATTC+TGG + chr8_1:19126208-19126227 None:intergenic 30.0%
!! AAAACTGGCATATTTTTGCA+GGG - chr8_1:19126654-19126673 Msa1183750:intron 30.0%
!!! AAAACTGACCTATTTTTGCA+GGG - chr8_1:19126715-19126734 Msa1183750:intron 30.0%
!!! AAAACTGACCTATTTTTGCA+GGG - chr8_1:19126715-19126734 Msa1183750:intron 30.0%
AATGGATGAATATTGAGAGA+AGG + chr8_1:19126966-19126985 None:intergenic 30.0%
! ATGTAAAGTATTCGAGCATT+TGG - chr8_1:19127097-19127116 Msa1183750:intron 30.0%
TACATGTTGTGTTACACATT+TGG + chr8_1:19127150-19127169 None:intergenic 30.0%
AAATGTGTAACACAACATGT+AGG - chr8_1:19127149-19127168 Msa1183750:intron 30.0%
! GTTAATTAGAAGCACATGTT+CGG - chr8_1:19127206-19127225 Msa1183750:intron 30.0%
!!! ATGTTCGGTAGTTTTTTTGT+GGG - chr8_1:19127221-19127240 Msa1183750:intron 30.0%
GTTTACATACATTGAACACT+TGG - chr8_1:19127274-19127293 Msa1183750:intron 30.0%
! ATGTTTCCTTCTTTTTGCTA+CGG + chr8_1:19127340-19127359 None:intergenic 30.0%
!!! ACTCCTCTGTTTTAATCATA+TGG + chr8_1:19127623-19127642 None:intergenic 30.0%
TTAGGAACAAAAATGTCTGA+AGG - chr8_1:19127701-19127720 Msa1183750:intron 30.0%
TATTACTATCATCTTACGTG+TGG + chr8_1:19127939-19127958 None:intergenic 30.0%
CAAATAAACGTAGCCAAAAA+AGG + chr8_1:19127993-19128012 None:intergenic 30.0%
! TTTGAAAGAAGCATATGATG+TGG + chr8_1:19128041-19128060 None:intergenic 30.0%
TGAGTAGTTGAAGACTTTAA+GGG + chr8_1:19128260-19128279 None:intergenic 30.0%
ATGAGTAGTTGAAGACTTTA+AGG + chr8_1:19128261-19128280 None:intergenic 30.0%
!!! TTTTTTGACAAACTTACGGA+AGG - chr8_1:19128299-19128318 Msa1183750:intron 30.0%
! TTTTTGACAAACTTACGGAA+GGG - chr8_1:19128300-19128319 Msa1183750:intron 30.0%
!! TTTTGCTAGGATTTGAAATC+CGG + chr8_1:19128811-19128830 None:intergenic 30.0%
GGACTAAAACTTATTATTCG+TGG + chr8_1:19128868-19128887 None:intergenic 30.0%
!! TAATAAGTTTTAGTCCGCAT+TGG - chr8_1:19128872-19128891 Msa1183750:intron 30.0%
GTGTATATTACACATTTACC+AGG + chr8_1:19128968-19128987 None:intergenic 30.0%
!!! GCCAAGTCACAATTTTTTTA+TGG - chr8_1:19129020-19129039 Msa1183750:intron 30.0%
CCCATAAAAAAATTGTGACT+TGG + chr8_1:19129024-19129043 None:intergenic 30.0%
GAAAAGAATCTCAATGCATT+AGG - chr8_1:19129043-19129062 Msa1183750:intron 30.0%
TAAATTCAACATGGAGTAGT+TGG - chr8_1:19129178-19129197 Msa1183750:intron 30.0%
GACATTGACATAGTAAACAA+AGG - chr8_1:19129202-19129221 Msa1183750:intron 30.0%
AAATCAGTTGCAAATGCATA+AGG + chr8_1:19120709-19120728 None:intergenic 30.0%
TCTGGAAAAACTTTCAAAGT+TGG - chr8_1:19129495-19129514 Msa1183750:intron 30.0%
!! TTCAAAGTTGGTGATAACTT+AGG - chr8_1:19120796-19120815 Msa1183750:three_prime_UTR 30.0%
TAGGTATGTATACATTCTGA+CGG - chr8_1:19129526-19129545 Msa1183750:intron 30.0%
!!! AATGGTGTTAGTCTTTTGAT+GGG - chr8_1:19121402-19121421 Msa1183750:intron 30.0%
!! CTTTGTTTCAGCAATGATTT+TGG - chr8_1:19121431-19121450 Msa1183750:intron 30.0%
!!! AATTCCTTCCTTTTGTTGTT+TGG - chr8_1:19130338-19130357 Msa1183750:intron 30.0%
TTGGTTGCCAATAATTGAAA+TGG - chr8_1:19130357-19130376 Msa1183750:CDS 30.0%
! TTTGCAACTGATTTCACTGT+TGG - chr8_1:19120715-19120734 Msa1183750:three_prime_UTR 35.0%
!! GTGAATGAAGTTGATGAAAG+TGG - chr8_1:19121075-19121094 Msa1183750:CDS 35.0%
ACCATAAAGAGCTATGATGA+TGG - chr8_1:19121123-19121142 Msa1183750:CDS 35.0%
TCCATCATCATAGCTCTTTA+TGG + chr8_1:19121127-19121146 None:intergenic 35.0%
!! CTATGATGATGGAGATTCTA+AGG - chr8_1:19121134-19121153 Msa1183750:CDS 35.0%
CATCAAAAGACTAACACCAT+TGG + chr8_1:19121403-19121422 None:intergenic 35.0%
!!! CAATGGTGTTAGTCTTTTGA+TGG - chr8_1:19121401-19121420 Msa1183750:intron 35.0%
!!! AGCAATGATTTTGGGTTTGA+TGG - chr8_1:19121440-19121459 Msa1183750:intron 35.0%
!!! ATTTTGGGTTTGATGGTCTA+GGG - chr8_1:19121447-19121466 Msa1183750:intron 35.0%
TGATATACGTGGATCATTTG+AGG - chr8_1:19121630-19121649 Msa1183750:CDS 35.0%
ATGAGCATACTAGAATGTTG+TGG - chr8_1:19121695-19121714 Msa1183750:CDS 35.0%
!! AAGATTTTGAGAACTGATGG+TGG - chr8_1:19121803-19121822 Msa1183750:intron 35.0%
TCTACTAAGTCATTGTGTTG+GGG + chr8_1:19121915-19121934 None:intergenic 35.0%
! TTGTTTTCAGCTTCTTTGTC+GGG + chr8_1:19122052-19122071 None:intergenic 35.0%
GTATTAGAAGAAGCTTGGAA+TGG - chr8_1:19122074-19122093 Msa1183750:intron 35.0%
GTATGATCCCAAAACTCAAA+AGG - chr8_1:19122238-19122257 Msa1183750:intron 35.0%
ACGAAAACGAAACACAAAAC+TGG - chr8_1:19122288-19122307 Msa1183750:intron 35.0%
CGAAAACGAAACACAAAACT+GGG - chr8_1:19122289-19122308 Msa1183750:intron 35.0%
TTCACTTTGATCTGATTCAG+CGG + chr8_1:19122354-19122373 None:intergenic 35.0%
!! GGAACTTGTCTAGTTCTATA+TGG + chr8_1:19122449-19122468 None:intergenic 35.0%
TCACAATCTTCAAGTCAAGT+GGG + chr8_1:19122470-19122489 None:intergenic 35.0%
TCATCATTCATTGCAGTATC+AGG + chr8_1:19122500-19122519 None:intergenic 35.0%
GATACTGCAATGAATGATGA+AGG - chr8_1:19122500-19122519 Msa1183750:intron 35.0%
AAGCAATGCAAATAGGTGTA+TGG - chr8_1:19122576-19122595 Msa1183750:intron 35.0%
CTATTGAGAAGACTAACATC+TGG - chr8_1:19122627-19122646 Msa1183750:intron 35.0%
! TCAATGCTTTTCTTCTTCTC+TGG + chr8_1:19122668-19122687 None:intergenic 35.0%
! CCTTTTACTTCAAATCTTGG+AGG + chr8_1:19122882-19122901 None:intergenic 35.0%
! CCTCCAAGATTTGAAGTAAA+AGG - chr8_1:19122879-19122898 Msa1183750:intron 35.0%
! AGTAAAAGGAAAGGAGCATA+TGG - chr8_1:19122893-19122912 Msa1183750:intron 35.0%
! AAACTGCATAAGGCACTTTA+TGG - chr8_1:19122921-19122940 Msa1183750:intron 35.0%
ATCCAATTTGAATCAGGAAC+TGG + chr8_1:19122986-19123005 None:intergenic 35.0%
AGTTCAAACACACAATGTAG+TGG - chr8_1:19123129-19123148 Msa1183750:intron 35.0%
GTTCAAACACACAATGTAGT+GGG - chr8_1:19123130-19123149 Msa1183750:intron 35.0%
AGCTTAGCATTTGTTTCAGA+AGG + chr8_1:19123291-19123310 None:intergenic 35.0%
!! TTCTGAAACAAATGCTAAGC+TGG - chr8_1:19123290-19123309 Msa1183750:intron 35.0%
ACAGAATTCGAACTGATAGT+TGG - chr8_1:19123345-19123364 Msa1183750:intron 35.0%
TATCATGTCTGCTATTGCAT+AGG + chr8_1:19123383-19123402 None:intergenic 35.0%
ACAGTGAGATGAGATTTCTT+AGG + chr8_1:19123447-19123466 None:intergenic 35.0%
! AGAGTGCTAAGATATGTGAA+AGG - chr8_1:19123474-19123493 Msa1183750:intron 35.0%
! TATTTGCTAGGCTAGACAAA+TGG + chr8_1:19123733-19123752 None:intergenic 35.0%
ATTGCCTTCAATTCTTCTCT+CGG + chr8_1:19123836-19123855 None:intergenic 35.0%
AAAAGTCACAACACAAAAGG+AGG - chr8_1:19123865-19123884 Msa1183750:intron 35.0%
! GAGGATATTCATTCACGTTT+TGG - chr8_1:19123884-19123903 Msa1183750:intron 35.0%
! GGATATTCATTCACGTTTTG+GGG - chr8_1:19123886-19123905 Msa1183750:intron 35.0%
CGCATACACAAAGAAATAGA+AGG - chr8_1:19123959-19123978 Msa1183750:intron 35.0%
! ACAAAGAAATAGAAGGCACA+AGG - chr8_1:19123966-19123985 Msa1183750:intron 35.0%
! TTCTATCTAACGGACAATCT+AGG - chr8_1:19124261-19124280 Msa1183750:intron 35.0%
! TCTATCTAACGGACAATCTA+GGG - chr8_1:19124262-19124281 Msa1183750:intron 35.0%
GGTGAACCTATAATCATCAA+AGG + chr8_1:19124334-19124353 None:intergenic 35.0%
GATGATTATAGGTTCACCTA+AGG - chr8_1:19124336-19124355 Msa1183750:intron 35.0%
ATAGGTTCACCTAAGGAATT+AGG - chr8_1:19124343-19124362 Msa1183750:intron 35.0%
TAGGTTCACCTAAGGAATTA+GGG - chr8_1:19124344-19124363 Msa1183750:intron 35.0%
TCATAATCCCCTAATTCCTT+AGG + chr8_1:19124355-19124374 None:intergenic 35.0%
ATGATTAGATGAGAGGACTT+AGG - chr8_1:19124371-19124390 Msa1183750:intron 35.0%
CATTCGTAGACTTAAGAAAC+AGG - chr8_1:19124444-19124463 Msa1183750:intron 35.0%
ACCAAAAACCAATTTGCCTA+AGG - chr8_1:19124567-19124586 Msa1183750:intron 35.0%
TCAACAATGCTGCAATATCA+TGG - chr8_1:19124812-19124831 Msa1183750:intron 35.0%
TCAAGCAATTTGACTGGATA+CGG - chr8_1:19124909-19124928 Msa1183750:intron 35.0%
GTGTTATAGGATTCTTAGCA+AGG + chr8_1:19125005-19125024 None:intergenic 35.0%
ATTAGGGAACAAGTGACAAA+GGG - chr8_1:19125063-19125082 Msa1183750:intron 35.0%
!!! CAAAACTGACCTATTTTTGC+AGG + chr8_1:19126714-19126733 None:intergenic 35.0%
! CTGCAAAAATAGGTCAGTTT+TGG - chr8_1:19125453-19125472 Msa1183750:intron 35.0%
!!! AAAACTGGCCTATTTTTGCA+GGG + chr8_1:19125515-19125534 None:intergenic 35.0%
!! CAAAACTGGCATATTTTTGC+AGG - chr8_1:19126653-19126672 Msa1183750:intron 35.0%
! CTGCAAAAATAGGTCAGTTT+TGG + chr8_1:19125453-19125472 None:intergenic 35.0%
!!! CAAAACTGACCTATTTTTGC+AGG - chr8_1:19126714-19126733 Msa1183750:intron 35.0%
! CTGCAAAAATAGGTCAGTTT+TGG + chr8_1:19125453-19125472 None:intergenic 35.0%
!!! CAAAACTGACCTATTTTTGC+AGG - chr8_1:19126714-19126733 Msa1183750:intron 35.0%
! CAAAACTGACCTATTTTGCA+GGG - chr8_1:19126836-19126855 Msa1183750:intron 35.0%
AAGAATGGAGAATGAGAAAG+TGG + chr8_1:19126941-19126960 None:intergenic 35.0%
TATTGAGAGAAGGAGAAGAA+TGG + chr8_1:19126956-19126975 None:intergenic 35.0%
GAATACTTTACATCATGGCA+TGG + chr8_1:19127090-19127109 None:intergenic 35.0%
TGCTCGAATACTTTACATCA+TGG + chr8_1:19127095-19127114 None:intergenic 35.0%
GGATAGTGCATGTGATATTT+AGG - chr8_1:19127170-19127189 Msa1183750:intron 35.0%
!!! CATGTTCGGTAGTTTTTTTG+TGG - chr8_1:19127220-19127239 Msa1183750:intron 35.0%
ACCTAATCTATTCAACCTTG+AGG - chr8_1:19128066-19128085 Msa1183750:intron 35.0%
!! GCTTTGGAACAAAGAAAAAG+AGG - chr8_1:19128088-19128107 Msa1183750:intron 35.0%
!! GAATGTTTGTTTCTGGAGAA+GGG + chr8_1:19128202-19128221 None:intergenic 35.0%
! AGTAGTTGAAGACTTTAAGG+GGG + chr8_1:19128258-19128277 None:intergenic 35.0%
GAGTAGTTGAAGACTTTAAG+GGG + chr8_1:19128259-19128278 None:intergenic 35.0%
GAACGGAGAGAATAAACATT+AGG - chr8_1:19128630-19128649 Msa1183750:intron 35.0%
ATGATAGATGAGGTTATGGA+AGG + chr8_1:19129253-19129272 None:intergenic 35.0%
TCCATAACCTCATCTATCAT+TGG - chr8_1:19129253-19129272 Msa1183750:intron 35.0%
AGTTGCAAATGCATAAGGAA+AGG + chr8_1:19120704-19120723 None:intergenic 35.0%
! TTTGCAACTGATTTCACTGT+TGG - chr8_1:19120715-19120734 Msa1183750:three_prime_UTR 35.0%
! AAGGAGTTGATTACACCAAA+TGG - chr8_1:19129469-19129488 Msa1183750:intron 35.0%
! AGGAGTTGATTACACCAAAT+GGG - chr8_1:19129470-19129489 Msa1183750:intron 35.0%
TTTCATCAACTTCATCCACT+TGG + chr8_1:19129787-19129806 None:intergenic 35.0%
TCCATCAGCATAGTTCTTTA+TGG + chr8_1:19129840-19129859 None:intergenic 35.0%
CTATGCTGATGGAAATTCTA+AGG - chr8_1:19129847-19129866 Msa1183750:CDS 35.0%
! TTGATGGAGATTTTGTTGGT+GGG + chr8_1:19130003-19130022 None:intergenic 35.0%
CATCAAAAGACTAACACCAT+TGG + chr8_1:19121403-19121422 None:intergenic 35.0%
!!! CAATGGTGTTAGTCTTTTGA+TGG - chr8_1:19121401-19121420 Msa1183750:intron 35.0%
!!! AGCAATGATTTTGGGTTTGA+TGG - chr8_1:19121440-19121459 Msa1183750:intron 35.0%
!!! GCAATGATTTTGGGTTTGAT+GGG - chr8_1:19121441-19121460 Msa1183750:intron 35.0%
ATTGGCAACCAAACAACAAA+AGG + chr8_1:19130349-19130368 None:intergenic 35.0%
! GATTATACCAAATGGGCTTC+TGG - chr8_1:19120766-19120785 Msa1183750:three_prime_UTR 40.0%
! TGTTTTTCCAGAAGCCCATT+TGG + chr8_1:19120776-19120795 None:intergenic 40.0%
! AACTTCATTCACTTGGTGGA+AGG + chr8_1:19121067-19121086 None:intergenic 40.0%
CATCAACTTCATTCACTTGG+TGG + chr8_1:19121071-19121090 None:intergenic 40.0%
!! AAGGTTGCATTGACTAAAGC+AGG - chr8_1:19121153-19121172 Msa1183750:CDS 40.0%
TACTTCATATGTCCTACTCC+AGG - chr8_1:19121183-19121202 Msa1183750:CDS 40.0%
! ACTTGGAGATTTTGTTGGTG+GGG + chr8_1:19121289-19121308 None:intergenic 40.0%
! CACTTGGAGATTTTGTTGGT+GGG + chr8_1:19121290-19121309 None:intergenic 40.0%
! GTTGTTGATGGAGTAGTTGA+TGG + chr8_1:19121318-19121337 None:intergenic 40.0%
CTAACAGCTCCATTATCCTT+TGG + chr8_1:19121375-19121394 None:intergenic 40.0%
!!! GATTTTGGGTTTGATGGTCT+AGG - chr8_1:19121446-19121465 Msa1183750:intron 40.0%
!! TTTGAGAACTGATGGTGGTA+AGG - chr8_1:19121808-19121827 Msa1183750:intron 40.0%
! AAGAAGCATGCTCAAGCAAA+AGG - chr8_1:19121965-19121984 Msa1183750:intron 40.0%
GTTCTATATGGTCTCACTAC+AGG + chr8_1:19122437-19122456 None:intergenic 40.0%
CTCACAATCTTCAAGTCAAG+TGG + chr8_1:19122471-19122490 None:intergenic 40.0%
! CACTTGACTTGAAGATTGTG+AGG - chr8_1:19122469-19122488 Msa1183750:intron 40.0%
AAAACACAAAGCAAGGCTAG+TGG - chr8_1:19122736-19122755 Msa1183750:intron 40.0%
ATTCTCTTGTTCCATGCTCT+AGG + chr8_1:19122960-19122979 None:intergenic 40.0%
GACCAGTTCCTGATTCAAAT+TGG - chr8_1:19122981-19123000 Msa1183750:intron 40.0%
AGGAATGACTGCTATTGCAA+TGG - chr8_1:19123185-19123204 Msa1183750:intron 40.0%
GGAATGACTGCTATTGCAAT+GGG - chr8_1:19123186-19123205 Msa1183750:intron 40.0%
GTCATCACATTGCTTTCAGT+TGG + chr8_1:19123525-19123544 None:intergenic 40.0%
! GGGTCAAACAACTTTGCTTT+TGG + chr8_1:19123815-19123834 None:intergenic 40.0%
TTGCCTTCAATTCTTCTCTC+GGG + chr8_1:19123835-19123854 None:intergenic 40.0%
TGGAGAGGAAGAAACAGAAA+CGG - chr8_1:19123930-19123949 Msa1183750:intron 40.0%
ACTGATACTAGCGTGTATCT+CGG - chr8_1:19124224-19124243 Msa1183750:intron 40.0%
AGGTTCACCTAAGGAATTAG+GGG - chr8_1:19124345-19124364 Msa1183750:intron 40.0%
GGGGATTATGATTAGATGAG+AGG - chr8_1:19124364-19124383 Msa1183750:intron 40.0%
ATGAGAGGACTTAGGATCAA+GGG - chr8_1:19124379-19124398 Msa1183750:intron 40.0%
!!! GCCTTAGGCAAATTGGTTTT+TGG + chr8_1:19124571-19124590 None:intergenic 40.0%
GGACTGTTCTAATCTCTACT+TGG + chr8_1:19124635-19124654 None:intergenic 40.0%
! GGAGAAAAGGTTGTACTGAT+AGG - chr8_1:19124721-19124740 Msa1183750:intron 40.0%
TAGGCTACTCTGATTCAGAT+TGG - chr8_1:19124740-19124759 Msa1183750:intron 40.0%
GGTGTGAAGATAGAAGTGAT+AGG - chr8_1:19124761-19124780 Msa1183750:intron 40.0%
AGCTTGTCAAGCAATTTGAC+TGG - chr8_1:19124903-19124922 Msa1183750:intron 40.0%
GAAAGAACTAGACTGTGAAG+TGG - chr8_1:19124936-19124955 Msa1183750:intron 40.0%
CATTAGGGAACAAGTGACAA+AGG - chr8_1:19125062-19125081 Msa1183750:intron 40.0%
GTTTACTTAAGGGACAAGCT+AGG - chr8_1:19125165-19125184 Msa1183750:intron 40.0%
! GCTAGGTCTCATTGATTGTT+AGG - chr8_1:19125182-19125201 Msa1183750:intron 40.0%
!! CAAAACTGGCCTATTTTGCA+GGG + chr8_1:19125394-19125413 None:intergenic 40.0%
! CTTTTGGTCCCTGCAAAAAT+AGG - chr8_1:19125443-19125462 Msa1183750:intron 40.0%
! CTTTTGGTCCCTGCAAAAAT+AGG - chr8_1:19125443-19125462 Msa1183750:intron 40.0%
!!! CAAAACTGGCCTATTTTTGC+AGG + chr8_1:19125516-19125535 None:intergenic 40.0%
! CTGCAAAAATAGGCCAGTTT+TGG - chr8_1:19125514-19125533 Msa1183750:intron 40.0%
! CTTTTGGTCCCTGCAAAAAT+AGG + chr8_1:19125443-19125462 None:intergenic 40.0%
! CTTTTGGTCCCTGCAAAAAT+AGG + chr8_1:19125443-19125462 None:intergenic 40.0%
! CCTGCAAAATAGGTCAGTTT+TGG + chr8_1:19126838-19126857 None:intergenic 40.0%
! CCAAAACTGACCTATTTTGC+AGG - chr8_1:19126835-19126854 Msa1183750:intron 40.0%
!! GGTTTTGATCCCTGCAAAAT+AGG + chr8_1:19126848-19126867 None:intergenic 40.0%
GGAGAATGAGAAAGTGGTTA+TGG + chr8_1:19126935-19126954 None:intergenic 40.0%
! TGGTGCCAATGACTACTAAT+TGG - chr8_1:19127117-19127136 Msa1183750:intron 40.0%
! AGGAGTACATGACAAACTCA+AGG - chr8_1:19127637-19127656 Msa1183750:intron 40.0%
ACTATCATCTTACGTGTGGA+AGG + chr8_1:19127935-19127954 None:intergenic 40.0%
! AAAAGGCACGAATAGTCAGT+TGG + chr8_1:19127976-19127995 None:intergenic 40.0%
!!! CTGACTATTCGTGCCTTTTT+TGG - chr8_1:19127977-19127996 Msa1183750:intron 40.0%
GCCTCAAGGTTGAATAGATT+AGG + chr8_1:19128070-19128089 None:intergenic 40.0%
TCTATTCAACCTTGAGGCTT+TGG - chr8_1:19128072-19128091 Msa1183750:intron 40.0%
TTCTTTGTTCCAAAGCCTCA+AGG + chr8_1:19128084-19128103 None:intergenic 40.0%
GGAGAAGGGAATAACTAACT+AGG + chr8_1:19128188-19128207 None:intergenic 40.0%
!! GGAATGTTTGTTTCTGGAGA+AGG + chr8_1:19128203-19128222 None:intergenic 40.0%
ATGATTACACACAACGTACG+CGG + chr8_1:19128911-19128930 None:intergenic 40.0%
GAAGCACGTGTGGTATTTAA+TGG + chr8_1:19128946-19128965 None:intergenic 40.0%
ACTTGGCAAGCTAATAGACA+TGG + chr8_1:19129007-19129026 None:intergenic 40.0%
TAGATGAGGTTATGGAAGGA+GGG + chr8_1:19129249-19129268 None:intergenic 40.0%
ATAGATGAGGTTATGGAAGG+AGG + chr8_1:19129250-19129269 None:intergenic 40.0%
GCCAATGATAGATGAGGTTA+TGG + chr8_1:19129257-19129276 None:intergenic 40.0%
ACTTGTGCCAATGATAGATG+AGG + chr8_1:19129263-19129282 None:intergenic 40.0%
! AGTTTTTCCAGAAGCCCATT+TGG + chr8_1:19129487-19129506 None:intergenic 40.0%
GCCATAAAGAACTATGCTGA+TGG - chr8_1:19129836-19129855 Msa1183750:CDS 40.0%
!! AAGGTTGCATTGACTAAAGC+AGG - chr8_1:19121153-19121172 Msa1183750:CDS 40.0%
TAGTACAATGACCTGGAGTA+GGG + chr8_1:19121197-19121216 None:intergenic 40.0%
! TGATGGAGATTTTGTTGGTG+GGG + chr8_1:19130002-19130021 None:intergenic 40.0%
!! GTTGATGGAGATTTTGTTGG+TGG + chr8_1:19130004-19130023 None:intergenic 40.0%
!!! GTGGTTGATGGAGATTTTGT+TGG + chr8_1:19130007-19130026 None:intergenic 40.0%
GAAGTTGAGTTTGTCTCTGA+AGG + chr8_1:19130064-19130083 None:intergenic 40.0%
CTAACAGCTCCATTATCCTT+TGG + chr8_1:19121375-19121394 None:intergenic 40.0%
!!! ATTTTGGGTTTGATGGGCTA+GGG - chr8_1:19130169-19130188 Msa1183750:intron 40.0%
GCAACCAAACAACAAAAGGA+AGG + chr8_1:19130345-19130364 None:intergenic 40.0%
GAGAGAGGACAAACATCAAG+AGG - chr8_1:19120862-19120881 Msa1183750:three_prime_UTR 45.0%
CTAGTACAATGACCTGGAGT+AGG + chr8_1:19121198-19121217 None:intergenic 45.0%
CCAGTACTAGTACAATGACC+TGG + chr8_1:19121204-19121223 None:intergenic 45.0%
CCAGGTCATTGTACTAGTAC+TGG - chr8_1:19121201-19121220 Msa1183750:CDS 45.0%
! GGTCATTGTACTAGTACTGG+TGG - chr8_1:19121204-19121223 Msa1183750:CDS 45.0%
!! TTGGAGATTTTGTTGGTGGG+GGG + chr8_1:19121287-19121306 None:intergenic 45.0%
!! CTTGGAGATTTTGTTGGTGG+GGG + chr8_1:19121288-19121307 None:intergenic 45.0%
! CCACTTGGAGATTTTGTTGG+TGG + chr8_1:19121291-19121310 None:intergenic 45.0%
CCACCAACAAAATCTCCAAG+TGG - chr8_1:19121288-19121307 Msa1183750:CDS 45.0%
!!! GTGCCACTTGGAGATTTTGT+TGG + chr8_1:19121294-19121313 None:intergenic 45.0%
ACTCCATCAACAACTCCTTC+AGG - chr8_1:19121324-19121343 Msa1183750:intron 45.0%
CTCCATCAACAACTCCTTCA+GGG - chr8_1:19121325-19121344 Msa1183750:intron 45.0%
GAAGTTGAGTTTGTCCCTGA+AGG + chr8_1:19121342-19121361 None:intergenic 45.0%
AACTTCTCCATCACCACCAA+AGG - chr8_1:19121356-19121375 Msa1183750:intron 45.0%
!! CCATTATCCTTTGGTGGTGA+TGG + chr8_1:19121366-19121385 None:intergenic 45.0%
CCATCACCACCAAAGGATAA+TGG - chr8_1:19121363-19121382 Msa1183750:intron 45.0%
ACAGCTCCATTATCCTTTGG+TGG + chr8_1:19121372-19121391 None:intergenic 45.0%
GGAGCTGTTAGTGTTTCCAA+TGG - chr8_1:19121384-19121403 Msa1183750:intron 45.0%
!! ACTGATGGTGGTAAGGACTA+AGG - chr8_1:19121815-19121834 Msa1183750:intron 45.0%
! TCATTGTGTTGGGGAGTGTA+GGG + chr8_1:19121906-19121925 None:intergenic 45.0%
! AGGACAAGCCTCACAAGTTT+TGG - chr8_1:19121985-19122004 Msa1183750:intron 45.0%
! GGACAAGCCTCACAAGTTTT+GGG - chr8_1:19121986-19122005 Msa1183750:intron 45.0%
! GACAAGCCTCACAAGTTTTG+GGG - chr8_1:19121987-19122006 Msa1183750:intron 45.0%
! AGCTTGCTTCTCTTTGCATC+AGG + chr8_1:19122158-19122177 None:intergenic 45.0%
! GGCACTTTATGGATTGAAGC+AGG - chr8_1:19122932-19122951 Msa1183750:intron 45.0%
GACTGCTATTGCAATGGGAA+TGG - chr8_1:19123191-19123210 Msa1183750:intron 45.0%
TGACCCGAGAGAAGAATTGA+AGG - chr8_1:19123829-19123848 Msa1183750:intron 45.0%
!!! CATTCACGTTTTGGGGAACA+AGG - chr8_1:19123893-19123912 Msa1183750:intron 45.0%
! ACAAGGCTGAATCACGGTTT+TGG - chr8_1:19123910-19123929 Msa1183750:intron 45.0%
! TCTAACGGACAATCTAGGGA+TGG - chr8_1:19124266-19124285 Msa1183750:intron 45.0%
GATGAGAGGACTTAGGATCA+AGG - chr8_1:19124378-19124397 Msa1183750:intron 45.0%
GTAAATAAGGGGGTTGCCTT+AGG + chr8_1:19124586-19124605 None:intergenic 45.0%
AGAGATTAGAACAGTCCCTG+TGG - chr8_1:19124638-19124657 Msa1183750:intron 45.0%
TGCGAAACTGAGTACATAGC+AGG - chr8_1:19124871-19124890 Msa1183750:intron 45.0%
TCAACTAGCTGCACTTCAGT+TGG + chr8_1:19125111-19125130 None:intergenic 45.0%
!! GGTTTTGGTCCCTGCAAAAT+AGG - chr8_1:19125382-19125401 Msa1183750:intron 45.0%
!! CCAAAACTGGCCTATTTTGC+AGG + chr8_1:19125395-19125414 None:intergenic 45.0%
! CCTGCAAAATAGGCCAGTTT+TGG - chr8_1:19125392-19125411 Msa1183750:intron 45.0%
GCAGGGACTAAAACCAAAAC+TGG + chr8_1:19126700-19126719 None:intergenic 45.0%
GCAGGGACTAAAACCAAAAC+TGG + chr8_1:19126700-19126719 None:intergenic 45.0%
GCAGGGACTAAAAGCAAAAC+TGG - chr8_1:19126639-19126658 Msa1183750:intron 45.0%
TGACAAACTTACGGAAGGGT+TGG - chr8_1:19128304-19128323 Msa1183750:intron 45.0%
TAAATACCACACGTGCTTCC+TGG - chr8_1:19128947-19128966 Msa1183750:intron 45.0%
AGATGAGGTTATGGAAGGAG+GGG + chr8_1:19129248-19129267 None:intergenic 45.0%
AACTCCTTGATTCCATCCAC+TGG + chr8_1:19129457-19129476 None:intergenic 45.0%
! GATTACACCAAATGGGCTTC+TGG - chr8_1:19129477-19129496 Msa1183750:intron 45.0%
! AACTTCATCCACTTGGTGGA+AGG + chr8_1:19129780-19129799 None:intergenic 45.0%
CATCAACTTCATCCACTTGG+TGG + chr8_1:19129784-19129803 None:intergenic 45.0%
TACTTCATATGCCCTACTCC+AGG - chr8_1:19129896-19129915 Msa1183750:intron 45.0%
CTAGTACAATGACCTGGAGT+AGG + chr8_1:19121198-19121217 None:intergenic 45.0%
CCAGTACTAGTACAATGACC+TGG + chr8_1:19121204-19121223 None:intergenic 45.0%
CCAGGTCATTGTACTAGTAC+TGG - chr8_1:19121201-19121220 Msa1183750:CDS 45.0%
! GGTCATTGTACTAGTACTGG+TGG - chr8_1:19121204-19121223 Msa1183750:CDS 45.0%
!! ATGGAGATTTTGTTGGTGGG+GGG + chr8_1:19130000-19130019 None:intergenic 45.0%
!! GATGGAGATTTTGTTGGTGG+GGG + chr8_1:19130001-19130020 None:intergenic 45.0%
!! GTAGTTGATGGTGTGGTTGA+TGG + chr8_1:19130019-19130038 None:intergenic 45.0%
!! TGATGGAGTAGTTGATGGTG+TGG + chr8_1:19130026-19130045 None:intergenic 45.0%
!! GTGGTTGATGGAGTAGTTGA+TGG + chr8_1:19130031-19130050 None:intergenic 45.0%
! TTTGTCTCTGAAGGAGCTGA+TGG + chr8_1:19130055-19130074 None:intergenic 45.0%
AACTTCTCCATCACCACCAA+AGG - chr8_1:19121356-19121375 Msa1183750:intron 45.0%
!! CCATTATCCTTTGGTGGTGA+TGG + chr8_1:19121366-19121385 None:intergenic 45.0%
CCATCACCACCAAAGGATAA+TGG - chr8_1:19121363-19121382 Msa1183750:intron 45.0%
ACAGCTCCATTATCCTTTGG+TGG + chr8_1:19121372-19121391 None:intergenic 45.0%
GGAGCTGTTAGTGTTTCCAA+TGG - chr8_1:19121384-19121403 Msa1183750:intron 45.0%
!!! GATTTTGGGTTTGATGGGCT+AGG - chr8_1:19130168-19130187 Msa1183750:intron 45.0%
!!! TTTTTTTTAAAAAAAAATTC+TGG - chr8_1:19125566-19125585 Msa1183750:intron 5.0%
!! AAAAATTAATAAAAAAATTC+TGG - chr8_1:19125596-19125615 Msa1183750:intron 5.0%
!! AATAAAAAATTAAAAAATTC+TGG - chr8_1:19125633-19125652 Msa1183750:intron 5.0%
!! TAAAAAATATTAAAAAATTC+TGG - chr8_1:19125672-19125691 Msa1183750:intron 5.0%
!! AATAATAAAAATGAAAAAAA+AGG - chr8_1:19125717-19125736 Msa1183750:intron 5.0%
!!! TTCTAAAAAAATTAAAATTA+TGG - chr8_1:19125812-19125831 Msa1183750:intron 5.0%
!!! ATAAATTTTTTTTAAAATTC+TGG + chr8_1:19126500-19126519 None:intergenic 5.0%
!! AAAAAATATTAAAAAAATTC+TGG + chr8_1:19126538-19126557 None:intergenic 5.0%
!!! TTTTATAAATTAAAAAATTC+TGG + chr8_1:19126602-19126621 None:intergenic 5.0%
!! TTCACTGTTGGTGATGCCAG+TGG - chr8_1:19120727-19120746 Msa1183750:three_prime_UTR 50.0%
AACTCCTTGAGTCCATCCAC+TGG + chr8_1:19120746-19120765 None:intergenic 50.0%
!! TGGAGATTTTGTTGGTGGGG+GGG + chr8_1:19121286-19121305 None:intergenic 50.0%
!! GTAGTTGATGGAGTGCCACT+TGG + chr8_1:19121306-19121325 None:intergenic 50.0%
GTCCCTGAAGGAGTTGTTGA+TGG + chr8_1:19121330-19121349 None:intergenic 50.0%
! GTCATTGTGTTGGGGAGTGT+AGG + chr8_1:19121907-19121926 None:intergenic 50.0%
GCTTCTCCCCAAAACTTGTG+AGG + chr8_1:19121996-19122015 None:intergenic 50.0%
GTGGCTAGAAGCTGTGAGAT+TGG - chr8_1:19122755-19122774 Msa1183750:intron 50.0%
TGAAGCAGGATCCTAGAGCA+TGG - chr8_1:19122946-19122965 Msa1183750:intron 50.0%
TGGGGAACAAGGCTGAATCA+CGG - chr8_1:19123904-19123923 Msa1183750:intron 50.0%
!!! GCTGAATCACGGTTTTGGAG+AGG - chr8_1:19123915-19123934 Msa1183750:intron 50.0%
CGCTTGCCGTAGCAAAAAGA+AGG - chr8_1:19127331-19127350 Msa1183750:intron 50.0%
AGAGGCCAACCTTTGTGACA+TGG - chr8_1:19128106-19128125 Msa1183750:intron 50.0%
ATCTCGCGTCCATGTCACAA+AGG + chr8_1:19128118-19128137 None:intergenic 50.0%
! CATTTACCAGGAAGCACGTG+TGG + chr8_1:19128956-19128975 None:intergenic 50.0%
!! TTCACTGTTGGTGATGCCAG+TGG - chr8_1:19120727-19120746 Msa1183750:three_prime_UTR 50.0%
GATGCCAGTGGATGGAATCA+AGG - chr8_1:19129450-19129469 Msa1183750:intron 50.0%
ATATGGCTCCTTCCACCAAG+TGG - chr8_1:19121056-19121075 Msa1183750:CDS 50.0%
!! TGGAGATTTTGTTGGTGGGG+GGG + chr8_1:19121286-19121305 None:intergenic 50.0%
!! CTGTTGGTGATGCCAGTGGA+TGG - chr8_1:19120731-19120750 Msa1183750:three_prime_UTR 55.0%
! GATGCCAGTGGATGGACTCA+AGG - chr8_1:19120739-19120758 Msa1183750:three_prime_UTR 55.0%
GGGGGTTGCCTTAGGCAAAT+TGG + chr8_1:19124578-19124597 None:intergenic 55.0%
CGCGTCCATGTCACAAAGGT+TGG + chr8_1:19128114-19128133 None:intergenic 55.0%
!! CTGTTGGTGATGCCAGTGGA+TGG - chr8_1:19120731-19120750 Msa1183750:three_prime_UTR 55.0%
! GGAGCTGATGGTGTGGTTGA+TGG + chr8_1:19130043-19130062 None:intergenic 55.0%
! CTCTGAAGGAGCTGATGGTG+TGG + chr8_1:19130050-19130069 None:intergenic 55.0%
AGCACCACCCCAACTCCAAG+TGG - chr8_1:19121258-19121277 Msa1183750:CDS 60.0%
GGTACCACTTGGAGTTGGGG+TGG + chr8_1:19121265-19121284 None:intergenic 60.0%
!! GGGGGTACCACTTGGAGTTG+GGG + chr8_1:19121268-19121287 None:intergenic 60.0%
!! GGGGGGTACCACTTGGAGTT+GGG + chr8_1:19121269-19121288 None:intergenic 60.0%
AGCACCACCCCAACTCCAAG+TGG - chr8_1:19121258-19121277 Msa1183750:CDS 60.0%
!! GGGGGGGTACCACTTGGAGT+TGG + chr8_1:19121270-19121289 None:intergenic 65.0%
!! GTTGGTGGGGGGGTACCACT+TGG + chr8_1:19121276-19121295 None:intergenic 65.0%
!! GGTGCCACTTGGAGTTGGGG+TGG + chr8_1:19129978-19129997 None:intergenic 65.0%
!! GGGGGTGCCACTTGGAGTTG+GGG + chr8_1:19129981-19130000 None:intergenic 65.0%
!! GGGGGGTGCCACTTGGAGTT+GGG + chr8_1:19129982-19130001 None:intergenic 65.0%
!! GGGGGGGTGCCACTTGGAGT+TGG + chr8_1:19129983-19130002 None:intergenic 70.0%
!! GTTGGTGGGGGGGTGCCACT+TGG + chr8_1:19129989-19130008 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 19120656 19130442 19120656 ID=Msa1183750;Name=Msa1183750
chr8_1 mRNA 19120656 19130442 19120656 ID=Msa1183750-mRNA-1;Parent=Msa1183750;Name=Msa1183750-mRNA-1;_AED=0.16;_eAED=0.16;_QI=2|0.25|0.2|1|0.25|0.2|5|253|329
chr8_1 exon 19120656 19121336 19120656 ID=Msa1183750-mRNA-1:exon:7398;Parent=Msa1183750-mRNA-1
chr8_1 exon 19121570 19121731 19121570 ID=Msa1183750-mRNA-1:exon:7397;Parent=Msa1183750-mRNA-1
chr8_1 exon 19129645 19129893 19129645 ID=Msa1183750-mRNA-1:exon:7396;Parent=Msa1183750-mRNA-1
chr8_1 exon 19129987 19130049 19129987 ID=Msa1183750-mRNA-1:exon:7395;Parent=Msa1183750-mRNA-1
chr8_1 exon 19130353 19130442 19130353 ID=Msa1183750-mRNA-1:exon:7394;Parent=Msa1183750-mRNA-1
chr8_1 five_prime_UTR 19130441 19130442 19130441 ID=Msa1183750-mRNA-1:five_prime_utr;Parent=Msa1183750-mRNA-1
chr8_1 CDS 19130353 19130440 19130353 ID=Msa1183750-mRNA-1:cds;Parent=Msa1183750-mRNA-1
chr8_1 CDS 19129987 19130049 19129987 ID=Msa1183750-mRNA-1:cds;Parent=Msa1183750-mRNA-1
chr8_1 CDS 19129645 19129893 19129645 ID=Msa1183750-mRNA-1:cds;Parent=Msa1183750-mRNA-1
chr8_1 CDS 19121570 19121731 19121570 ID=Msa1183750-mRNA-1:cds;Parent=Msa1183750-mRNA-1
chr8_1 CDS 19120909 19121336 19120909 ID=Msa1183750-mRNA-1:cds;Parent=Msa1183750-mRNA-1
chr8_1 three_prime_UTR 19120656 19120908 19120656 ID=Msa1183750-mRNA-1:three_prime_utr;Parent=Msa1183750-mRNA-1
Gene Sequence

>Msa1183750

ATGAATACATCAATGATAGCTTCTTTCTTTGTTTTGTTGTTGGCTTTTCCTTATGCATTTGCAACTGATTTCACTGTTGGTGATGCCATGTTTAAATATGGCTCCTTCCACCAAGTGAATGAAGTTGATGAAAGTGGCTACAAAAGCTGCAGTCATTGTACTAGTACTGGTGGCATGAAGCTTGAAGTCAATGTTGTTGCTGCTAGCACCACCCCAACTCCAAGTGGTACCCCCCCACCAACAAAATCTCCAAGTGGCACTCCATCAACTACTCCATCAACAACTCCTTCAGGGACAAACTCAACTTCTCCATCACCACCAAAGGATAATGGAGCTGTTAGTGTTTCCAATGGTGTTAGTCTTTTGATGGGTTCTTTCTTTGTTTCAGCAATGATTTTGGGCATGAATACATCAATGATAGCTTCTTTCTTTGTTCTATTGTTGGCCTTTCCTTATGCATTTGCAACTGATTTCACTGTTGGTGATGCCAGTGGATGGAATCAAGGAGTTGATTACACCAAATGGGCTTCTGGAAAAACTTTCAAAGTTGGTGATAACTTAGTGTTCAAATATGGCTCCTTCCACCAAGTGGATGAAGTTGATGAAAGTGACTACAAAAGCTGCACTTCAAGCAACGCCATAAAGAACTATGCTGATGGAAATTCTAAGGTTGCATTGACTAAAGCAGGAAAAATTTACTTCATATGCCCTACTCCAGGTCATTGTACTAGTACTGGTGGCATGAAGCTTGAAGTCAATGTTGTTGCTGCTAGCACCACCCCAACTCCAAGTGGCACCCCCCCACCAACAAAATCTCCATCAACCACACCATCAACTACTCCATCAACCACACCATCAGCTCCTTCAGAGACAAACTCAACTTCTCCATCACCACCAAAGGATAATGGAGCTGTTAGTGTTTCCAATGGTGTTAGTCTTTTGATGGGTTCTTTCTTTGTTTCAGCAATGATTTTGGGTTTGATGGGCTAG
Protein sequence

>Msa1183750

MNTSMIASFFVLLLAFPYAFATDFTVGDAMFKYGSFHQVNEVDESGYKSCSHCTSTGGMKLEVNVVAASTTPTPSGTPPPTKSPSGTPSTTPSTTPSGTNSTSPSPPKDNGAVSVSNGVSLLMGSFFVSAMILGMNTSMIASFFVLLLAFPYAFATDFTVGDASGWNQGVDYTKWASGKTFKVGDNLVFKYGSFHQVDEVDESDYKSCTSSNAIKNYADGNSKVALTKAGKIYFICPTPGHCTSTGGMKLEVNVVAASTTPTPSGTPPPTKSPSTTPSTTPSTTPSAPSETNSTSPSPPKDNGAVSVSNGVSLLMGSFFVSAMILGLMG*