Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0083890 | XP_013469370.1 | 95.652 | 483 | 10 | 3 | 1 | 474 | 1 | 481 | 0.0 | 919 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0083890 | sp|F4HW02|GAT1_ARATH | 52.036 | 442 | 203 | 1 | 41 | 473 | 9 | 450 | 1.27e-167 | 483 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0083890 | A0A072VPU6 | 95.652 | 483 | 10 | 3 | 1 | 474 | 1 | 481 | 0.0 | 919 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026420 | Msa0083890 | 0.842054 | 3.268415e-58 | -8.615850e-47 |
| Msa0035790 | Msa0083890 | 0.964510 | 2.036940e-123 | -8.615850e-47 |
| Msa0046680 | Msa0083890 | 0.818202 | 2.216306e-52 | -8.615850e-47 |
| Msa0051480 | Msa0083890 | 0.866674 | 2.399201e-65 | -8.615850e-47 |
| Msa0051620 | Msa0083890 | 0.844933 | 5.560759e-59 | -8.615850e-47 |
| Msa0051730 | Msa0083890 | 0.826204 | 3.084526e-54 | -8.615850e-47 |
| Msa0083890 | Msa0143640 | 0.807561 | 4.760949e-50 | -8.615850e-47 |
| Msa0083890 | Msa0146090 | 0.826972 | 2.022757e-54 | -8.615850e-47 |
| Msa0083890 | Msa0146200 | 0.867107 | 1.745863e-65 | -8.615850e-47 |
| Msa0083890 | Msa0162680 | 0.825514 | 4.498229e-54 | -8.615850e-47 |
| Msa0083890 | Msa0223140 | 0.808685 | 2.743305e-50 | -8.615850e-47 |
| Msa0083890 | Msa0238710 | 0.834378 | 3.103654e-56 | -8.615850e-47 |
| Msa0083890 | Msa0246140 | 0.813861 | 2.065606e-51 | -8.615850e-47 |
| Msa0083890 | Msa0264500 | 0.840919 | 6.504484e-58 | -8.615850e-47 |
| Msa0083890 | Msa0302510 | 0.832977 | 6.946212e-56 | -8.615850e-47 |
| Msa0083890 | Msa0332360 | 0.810206 | 1.293598e-50 | -8.615850e-47 |
| Msa0083890 | Msa0339720 | 0.813089 | 3.053463e-51 | -8.615850e-47 |
| Msa0083890 | Msa0345980 | 0.803632 | 3.177810e-49 | -8.615850e-47 |
| Msa0083890 | Msa0385320 | 0.851419 | 8.983340e-61 | -8.615850e-47 |
| Msa0083890 | Msa0393100 | 0.832077 | 1.161127e-55 | -8.615850e-47 |
| Msa0083890 | Msa0402800 | 0.866105 | 3.635619e-65 | -8.615850e-47 |
| Msa0083890 | Msa0438070 | 0.868239 | 7.566751e-66 | -8.615850e-47 |
| Msa0083890 | Msa0449620 | 0.851948 | 6.361244e-61 | -8.615850e-47 |
| Msa0083890 | Msa0466850 | 0.819381 | 1.196496e-52 | -8.615850e-47 |
| Msa0083890 | Msa0480530 | 0.816474 | 5.429096e-52 | -8.615850e-47 |
| Msa0083890 | Msa0480540 | 0.834436 | 3.000519e-56 | -8.615850e-47 |
| Msa0083890 | Msa0480550 | 0.845869 | 3.103253e-59 | -8.615850e-47 |
| Msa0083890 | Msa0481740 | 0.820468 | 6.750492e-53 | -8.615850e-47 |
| Msa0083890 | Msa0481770 | 0.899096 | 2.778383e-77 | -8.615850e-47 |
| Msa0083890 | Msa0488580 | 0.815465 | 9.116794e-52 | -8.615850e-47 |
| Msa0083890 | Msa0497860 | 0.862786 | 3.960320e-64 | -8.615850e-47 |
| Msa0083890 | Msa0513670 | 0.821920 | 3.123151e-53 | -8.615850e-47 |
| Msa0083890 | Msa0523080 | 0.837301 | 5.635740e-57 | -8.615850e-47 |
| Msa0083890 | Msa0568110 | 0.804659 | 1.942410e-49 | -8.615850e-47 |
| Msa0083890 | Msa0570460 | 0.812428 | 4.260278e-51 | -8.615850e-47 |
| Msa0083890 | Msa0572370 | -0.826361 | 2.829513e-54 | -8.615850e-47 |
| Msa0083890 | Msa0580840 | 0.803398 | 3.553951e-49 | -8.615850e-47 |
| Msa0083890 | Msa0645480 | 0.830635 | 2.628285e-55 | -8.615850e-47 |
| Msa0083890 | Msa0740630 | 0.821548 | 3.808929e-53 | -8.615850e-47 |
| Msa0083890 | Msa0744540 | 0.815397 | 9.439735e-52 | -8.615850e-47 |
| Msa0083890 | Msa0744550 | 0.836541 | 8.809299e-57 | -8.615850e-47 |
| Msa0083890 | Msa0744560 | 0.847548 | 1.078917e-59 | -8.615850e-47 |
| Msa0083890 | Msa0746340 | 0.832890 | 7.300471e-56 | -8.615850e-47 |
| Msa0083890 | Msa0795320 | 0.803592 | 3.238819e-49 | -8.615850e-47 |
| Msa0083890 | Msa0816630 | 0.811509 | 6.755174e-51 | -8.615850e-47 |
| Msa0083890 | Msa0820880 | 0.825389 | 4.815239e-54 | -8.615850e-47 |
| Msa0083890 | Msa0826370 | 0.819801 | 9.594349e-53 | -8.615850e-47 |
| Msa0083890 | Msa0826380 | 0.819416 | 1.175084e-52 | -8.615850e-47 |
| Msa0083890 | Msa0826450 | 0.825067 | 5.736516e-54 | -8.615850e-47 |
| Msa0083890 | Msa0859040 | 0.805585 | 1.243133e-49 | -8.615850e-47 |
| Msa0083890 | Msa0863940 | 0.808182 | 3.511899e-50 | -8.615850e-47 |
| Msa0083890 | Msa0865810 | 0.843197 | 1.624678e-58 | -8.615850e-47 |
| Msa0083890 | Msa0865820 | 0.822044 | 2.923779e-53 | -8.615850e-47 |
| Msa0083890 | Msa0865830 | 0.817637 | 2.974001e-52 | -8.615850e-47 |
| Msa0083890 | Msa1025750 | 0.812006 | 5.268484e-51 | -8.615850e-47 |
| Msa0083890 | Msa1026080 | 0.810323 | 1.220421e-50 | -8.615850e-47 |
| Msa0083890 | Msa1067800 | 0.821918 | 3.127759e-53 | -8.615850e-47 |
| Msa0083890 | Msa1080650 | 0.825021 | 5.881810e-54 | -8.615850e-47 |
| Msa0083890 | Msa1126440 | 0.818095 | 2.343396e-52 | -8.615850e-47 |
| Msa0083890 | Msa1223560 | 0.802977 | 4.342697e-49 | -8.615850e-47 |
| Msa0083890 | Msa1224510 | 0.832679 | 8.238194e-56 | -8.615850e-47 |
| Msa0083890 | Msa1228810 | 0.809599 | 1.747317e-50 | -8.615850e-47 |
| Msa0083890 | Msa1256600 | 0.809196 | 2.132309e-50 | -8.615850e-47 |
| Msa0083890 | Msa1262540 | 0.803187 | 3.928390e-49 | -8.615850e-47 |
| Msa0083890 | Msa1299480 | 0.806355 | 8.564032e-50 | -8.615850e-47 |
| Msa0083890 | Msa1322180 | 0.827292 | 1.696071e-54 | -8.615850e-47 |
| Msa0083890 | Msa1333700 | 0.826636 | 2.433672e-54 | -8.615850e-47 |
| Msa0083890 | Msa1349830 | 0.823712 | 1.194739e-53 | -8.615850e-47 |
| Msa0083890 | Msa1358650 | 0.813880 | 2.045763e-51 | -8.615850e-47 |
| Msa0083890 | Msa1369320 | 0.808435 | 3.101122e-50 | -8.615850e-47 |
| Msa0083890 | Msa1377050 | 0.849331 | 3.462988e-60 | -8.615850e-47 |
| Msa0083890 | Msa1383790 | 0.819988 | 8.695293e-53 | -8.615850e-47 |
| Msa0083890 | Msa1387610 | 0.805639 | 1.211134e-49 | -8.615850e-47 |
| Msa0083890 | Msa1396160 | 0.965253 | 2.296057e-124 | -8.615850e-47 |
| Msa0083890 | Msa1398120 | 0.814535 | 1.466261e-51 | -8.615850e-47 |
| Msa0083890 | Msa1427000 | 0.801406 | 9.140634e-49 | -8.615850e-47 |
| Msa0083890 | Msa1449470 | 0.805308 | 1.421189e-49 | -8.615850e-47 |
| Msa0083890 | Msa1453600 | 0.894634 | 2.050871e-75 | -8.615850e-47 |
| Msa0083890 | Msa1459920 | 0.805140 | 1.541235e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0083890 | MtrunA17_Chr1g0198081 | 95.652 | 483 | 10 | 3 | 1 | 474 | 1 | 481 | 0.0 | 919 |
| Msa0083890 | MtrunA17_Chr4g0027241 | 56.681 | 464 | 189 | 3 | 19 | 473 | 1 | 461 | 0.0 | 546 |
| Msa0083890 | MtrunA17_Chr8g0387941 | 47.072 | 444 | 222 | 5 | 41 | 474 | 10 | 450 | 7.52e-136 | 399 |
| Msa0083890 | MtrunA17_Chr1g0184721 | 34.112 | 428 | 255 | 8 | 61 | 473 | 24 | 439 | 2.27e-73 | 238 |
| Msa0083890 | MtrunA17_Chr4g0027261 | 55.102 | 196 | 77 | 3 | 279 | 473 | 1 | 186 | 9.30e-66 | 209 |
| Msa0083890 | MtrunA17_Chr6g0458931 | 29.621 | 449 | 284 | 10 | 40 | 472 | 23 | 455 | 5.97e-56 | 192 |
| Msa0083890 | MtrunA17_Chr2g0331721 | 28.721 | 477 | 301 | 13 | 19 | 472 | 1 | 461 | 1.75e-51 | 181 |
| Msa0083890 | MtrunA17_Chr8g0376991 | 29.930 | 431 | 264 | 12 | 61 | 472 | 25 | 436 | 3.06e-48 | 171 |
| Msa0083890 | MtrunA17_Chr5g0436281 | 32.323 | 396 | 239 | 9 | 90 | 473 | 4 | 382 | 5.87e-48 | 169 |
| Msa0083890 | MtrunA17_Chr4g0057851 | 28.132 | 423 | 266 | 11 | 66 | 469 | 17 | 420 | 3.74e-45 | 163 |
| Msa0083890 | MtrunA17_Chr4g0058161 | 29.299 | 471 | 290 | 14 | 20 | 473 | 5 | 449 | 5.13e-45 | 163 |
| Msa0083890 | MtrunA17_Chr6g0459021 | 28.884 | 457 | 289 | 11 | 32 | 472 | 11 | 447 | 3.41e-43 | 158 |
| Msa0083890 | MtrunA17_Chr6g0459031 | 29.907 | 428 | 269 | 9 | 61 | 472 | 16 | 428 | 4.92e-42 | 154 |
| Msa0083890 | MtrunA17_Chr6g0458921 | 29.439 | 428 | 271 | 9 | 61 | 472 | 16 | 428 | 3.68e-41 | 152 |
| Msa0083890 | MtrunA17_Chr7g0230011 | 28.936 | 470 | 291 | 12 | 19 | 472 | 1 | 443 | 5.03e-41 | 152 |
| Msa0083890 | MtrunA17_Chr3g0122921 | 27.409 | 467 | 279 | 15 | 25 | 472 | 3 | 428 | 1.23e-40 | 150 |
| Msa0083890 | MtrunA17_Chr1g0198541 | 29.698 | 431 | 265 | 12 | 61 | 472 | 26 | 437 | 2.36e-39 | 147 |
| Msa0083890 | MtrunA17_Chr1g0198531 | 28.603 | 451 | 280 | 13 | 41 | 472 | 10 | 437 | 5.07e-39 | 146 |
| Msa0083890 | MtrunA17_Chr1g0206871 | 27.332 | 461 | 279 | 11 | 62 | 474 | 18 | 470 | 1.26e-38 | 146 |
| Msa0083890 | MtrunA17_Chr3g0077651 | 29.012 | 486 | 291 | 18 | 11 | 472 | 14 | 469 | 1.98e-38 | 145 |
| Msa0083890 | MtrunA17_Chr5g0422741 | 28.935 | 432 | 267 | 13 | 61 | 472 | 28 | 439 | 9.38e-38 | 143 |
| Msa0083890 | MtrunA17_Chr3g0112971 | 30.628 | 382 | 234 | 10 | 105 | 473 | 72 | 435 | 1.27e-37 | 142 |
| Msa0083890 | MtrunA17_Chr6g0459001 | 28.694 | 467 | 264 | 12 | 61 | 472 | 24 | 476 | 2.77e-37 | 142 |
| Msa0083890 | MtrunA17_Chr6g0459011 | 29.340 | 409 | 257 | 10 | 75 | 467 | 1 | 393 | 7.21e-37 | 139 |
| Msa0083890 | MtrunA17_Chr3g0143701 | 27.064 | 436 | 257 | 16 | 61 | 458 | 86 | 498 | 3.44e-36 | 140 |
| Msa0083890 | MtrunA17_Chr2g0328081 | 27.570 | 428 | 279 | 9 | 61 | 472 | 16 | 428 | 8.79e-35 | 134 |
| Msa0083890 | MtrunA17_Chr3g0125081 | 26.651 | 439 | 279 | 12 | 70 | 472 | 45 | 476 | 1.06e-30 | 124 |
| Msa0083890 | MtrunA17_Chr1g0159761 | 26.450 | 431 | 269 | 14 | 32 | 423 | 2 | 423 | 4.73e-30 | 122 |
| Msa0083890 | MtrunA17_Chr1g0146411 | 26.683 | 401 | 253 | 13 | 70 | 438 | 44 | 435 | 2.31e-29 | 120 |
| Msa0083890 | MtrunA17_Chr4g0037201 | 25.462 | 487 | 296 | 17 | 39 | 474 | 41 | 511 | 2.55e-29 | 120 |
| Msa0083890 | MtrunA17_Chr3g0140761 | 24.520 | 469 | 303 | 14 | 43 | 471 | 21 | 478 | 3.44e-29 | 119 |
| Msa0083890 | MtrunA17_Chr3g0125101 | 25.682 | 440 | 283 | 11 | 70 | 472 | 45 | 477 | 3.64e-29 | 119 |
| Msa0083890 | MtrunA17_Chr3g0130641 | 25.446 | 448 | 276 | 16 | 70 | 474 | 44 | 476 | 6.59e-29 | 119 |
| Msa0083890 | MtrunA17_Chr3g0125091 | 25.051 | 487 | 304 | 16 | 35 | 472 | 3 | 477 | 9.49e-29 | 118 |
| Msa0083890 | MtrunA17_Chr5g0406331 | 28.509 | 456 | 269 | 18 | 51 | 472 | 78 | 510 | 6.63e-27 | 113 |
| Msa0083890 | MtrunA17_Chr1g0146491 | 24.615 | 455 | 286 | 16 | 62 | 471 | 26 | 468 | 3.68e-26 | 110 |
| Msa0083890 | MtrunA17_Chr3g0130651 | 26.582 | 395 | 234 | 14 | 70 | 423 | 37 | 416 | 3.77e-26 | 110 |
| Msa0083890 | MtrunA17_Chr3g0103231 | 25.570 | 395 | 251 | 11 | 70 | 428 | 34 | 421 | 4.11e-26 | 110 |
| Msa0083890 | MtrunA17_Chr8g0384661 | 24.466 | 515 | 326 | 19 | 1 | 474 | 1 | 493 | 1.32e-24 | 106 |
| Msa0083890 | MtrunA17_Chr3g0103221 | 24.306 | 432 | 282 | 13 | 70 | 464 | 41 | 464 | 1.52e-24 | 106 |
| Msa0083890 | MtrunA17_Chr3g0103211 | 26.582 | 395 | 247 | 12 | 70 | 428 | 34 | 421 | 6.92e-23 | 100 |
| Msa0083890 | MtrunA17_Chr3g0140531 | 24.319 | 477 | 312 | 16 | 33 | 471 | 2 | 467 | 1.05e-22 | 100 |
| Msa0083890 | MtrunA17_Chr5g0406351 | 25.607 | 453 | 287 | 16 | 51 | 472 | 99 | 532 | 4.19e-22 | 99.4 |
| Msa0083890 | MtrunA17_Chr5g0447221 | 25.823 | 395 | 250 | 14 | 70 | 428 | 40 | 427 | 1.11e-21 | 97.4 |
| Msa0083890 | MtrunA17_Chr4g0038711 | 24.350 | 423 | 277 | 13 | 69 | 461 | 80 | 489 | 2.40e-21 | 96.7 |
| Msa0083890 | MtrunA17_Chr1g0206851 | 27.249 | 389 | 218 | 12 | 124 | 474 | 19 | 380 | 4.28e-21 | 94.7 |
| Msa0083890 | MtrunA17_Chr2g0281341 | 27.551 | 294 | 177 | 10 | 40 | 308 | 77 | 359 | 1.23e-19 | 91.7 |
| Msa0083890 | MtrunA17_Chr3g0103271 | 25.765 | 392 | 245 | 15 | 70 | 423 | 38 | 421 | 1.26e-19 | 91.3 |
| Msa0083890 | MtrunA17_Chr1g0146391 | 23.025 | 443 | 290 | 15 | 70 | 472 | 23 | 454 | 7.63e-19 | 89.0 |
| Msa0083890 | MtrunA17_Chr2g0293331 | 23.266 | 447 | 284 | 15 | 70 | 472 | 23 | 454 | 1.59e-18 | 87.8 |
| Msa0083890 | MtrunA17_Chr1g0146331 | 23.947 | 451 | 277 | 18 | 70 | 472 | 31 | 463 | 1.30e-17 | 85.1 |
| Msa0083890 | MtrunA17_Chr1g0206821 | 26.891 | 238 | 151 | 8 | 62 | 276 | 25 | 262 | 3.33e-17 | 84.3 |
| Msa0083890 | MtrunA17_Chr1g0206821 | 28.000 | 225 | 138 | 4 | 267 | 474 | 313 | 530 | 3.88e-12 | 68.6 |
| Msa0083890 | MtrunA17_Chr1g0206831 | 25.680 | 331 | 206 | 10 | 168 | 470 | 21 | 339 | 5.38e-17 | 82.0 |
| Msa0083890 | MtrunA17_Chr3g0140541 | 23.515 | 404 | 265 | 10 | 70 | 437 | 36 | 431 | 3.27e-16 | 80.9 |
| Msa0083890 | MtrunA17_Chr4g0037361 | 24.262 | 474 | 293 | 16 | 37 | 473 | 15 | 459 | 2.04e-14 | 75.5 |
| Msa0083890 | MtrunA17_Chr2g0281021 | 41.096 | 73 | 33 | 2 | 405 | 472 | 1 | 68 | 2.38e-13 | 65.1 |
| Msa0083890 | MtrunA17_Chr5g0447231 | 23.604 | 394 | 251 | 14 | 70 | 423 | 36 | 419 | 6.23e-13 | 70.5 |
| Msa0083890 | MtrunA17_Chr4g0006031 | 23.576 | 509 | 302 | 21 | 2 | 473 | 5 | 463 | 2.67e-11 | 65.5 |
| Msa0083890 | MtrunA17_Chr5g0436811 | 22.737 | 453 | 268 | 18 | 63 | 473 | 50 | 462 | 4.46e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0083890 | AT1G08230.2 | 52.036 | 442 | 203 | 1 | 41 | 473 | 9 | 450 | 1.30e-168 | 483 |
| Msa0083890 | AT5G41800.1 | 49.431 | 439 | 210 | 4 | 46 | 474 | 13 | 449 | 6.15e-137 | 402 |
| Msa0083890 | AT1G08230.3 | 51.622 | 339 | 164 | 0 | 135 | 473 | 12 | 350 | 5.94e-128 | 375 |
| Msa0083890 | AT1G08230.4 | 51.976 | 329 | 158 | 0 | 145 | 473 | 3 | 331 | 1.53e-125 | 369 |
| Msa0083890 | AT1G08230.6 | 51.976 | 329 | 158 | 0 | 145 | 473 | 3 | 331 | 1.53e-125 | 369 |
| Msa0083890 | AT1G08230.5 | 51.976 | 329 | 158 | 0 | 145 | 473 | 3 | 331 | 1.53e-125 | 369 |
| Msa0083890 | AT5G40780.1 | 29.614 | 466 | 290 | 11 | 23 | 472 | 3 | 446 | 3.50e-54 | 188 |
| Msa0083890 | AT3G55740.1 | 31.776 | 428 | 262 | 10 | 59 | 473 | 28 | 438 | 4.82e-53 | 185 |
| Msa0083890 | AT2G39890.2 | 31.235 | 429 | 263 | 11 | 59 | 473 | 31 | 441 | 7.20e-52 | 182 |
| Msa0083890 | AT2G39890.1 | 31.235 | 429 | 263 | 11 | 59 | 473 | 31 | 441 | 7.20e-52 | 182 |
| Msa0083890 | AT3G55740.2 | 32.323 | 396 | 239 | 9 | 90 | 473 | 4 | 382 | 1.16e-50 | 177 |
| Msa0083890 | AT3G55740.3 | 32.323 | 396 | 239 | 9 | 90 | 473 | 4 | 382 | 1.16e-50 | 177 |
| Msa0083890 | AT2G36590.1 | 32.634 | 429 | 257 | 11 | 59 | 473 | 25 | 435 | 2.84e-50 | 177 |
| Msa0083890 | AT5G40780.3 | 31.643 | 414 | 251 | 10 | 75 | 472 | 1 | 398 | 3.07e-50 | 176 |
| Msa0083890 | AT5G40780.2 | 31.643 | 414 | 251 | 10 | 75 | 472 | 1 | 398 | 3.07e-50 | 176 |
| Msa0083890 | AT2G39890.3 | 31.738 | 397 | 240 | 10 | 90 | 473 | 4 | 382 | 1.99e-49 | 174 |
| Msa0083890 | AT1G48640.1 | 29.148 | 446 | 284 | 11 | 43 | 472 | 24 | 453 | 1.28e-48 | 173 |
| Msa0083890 | AT1G24400.1 | 28.753 | 473 | 286 | 13 | 19 | 472 | 1 | 441 | 2.85e-45 | 164 |
| Msa0083890 | AT1G61270.1 | 29.466 | 431 | 267 | 11 | 49 | 458 | 23 | 437 | 1.42e-43 | 159 |
| Msa0083890 | AT1G71680.1 | 29.095 | 464 | 290 | 13 | 30 | 472 | 3 | 448 | 1.61e-42 | 157 |
| Msa0083890 | AT1G67640.1 | 28.947 | 456 | 283 | 11 | 42 | 472 | 2 | 441 | 8.98e-39 | 146 |
| Msa0083890 | AT3G01760.1 | 27.446 | 419 | 268 | 10 | 61 | 458 | 33 | 436 | 6.88e-38 | 144 |
| Msa0083890 | AT1G25530.1 | 28.538 | 431 | 268 | 12 | 62 | 472 | 30 | 440 | 1.36e-34 | 134 |
| Msa0083890 | AT1G71680.2 | 28.080 | 349 | 221 | 9 | 30 | 360 | 3 | 339 | 2.17e-34 | 132 |
| Msa0083890 | AT2G36590.2 | 32.993 | 294 | 174 | 7 | 59 | 342 | 25 | 305 | 2.54e-34 | 131 |
| Msa0083890 | AT5G09220.1 | 25.778 | 450 | 276 | 14 | 70 | 474 | 56 | 492 | 8.34e-31 | 125 |
| Msa0083890 | AT1G10010.1 | 26.770 | 452 | 283 | 12 | 62 | 473 | 30 | 473 | 2.59e-30 | 123 |
| Msa0083890 | AT1G10010.2 | 26.770 | 452 | 283 | 12 | 62 | 473 | 31 | 474 | 2.85e-30 | 123 |
| Msa0083890 | AT5G63850.1 | 25.499 | 451 | 276 | 15 | 70 | 474 | 29 | 465 | 1.15e-29 | 121 |
| Msa0083890 | AT1G77380.1 | 25.057 | 439 | 286 | 11 | 70 | 471 | 40 | 472 | 1.18e-27 | 115 |
| Msa0083890 | AT1G58360.1 | 23.029 | 482 | 316 | 12 | 31 | 471 | 13 | 480 | 2.76e-26 | 111 |
| Msa0083890 | AT1G44100.1 | 25.658 | 456 | 274 | 17 | 70 | 474 | 38 | 479 | 9.38e-26 | 110 |
| Msa0083890 | AT5G49630.1 | 25.115 | 434 | 261 | 15 | 35 | 420 | 10 | 427 | 1.07e-22 | 101 |
| Msa0083890 | AT4G35180.1 | 25.467 | 428 | 285 | 14 | 61 | 466 | 59 | 474 | 5.25e-21 | 95.9 |
| Msa0083890 | AT1G47670.1 | 24.459 | 462 | 285 | 17 | 36 | 458 | 69 | 505 | 1.45e-18 | 89.0 |
| Msa0083890 | AT5G23810.1 | 25.570 | 395 | 240 | 14 | 70 | 420 | 36 | 420 | 1.47e-15 | 79.3 |
| Msa0083890 | AT4G35180.2 | 27.170 | 265 | 170 | 8 | 61 | 308 | 59 | 317 | 3.42e-15 | 77.0 |
| Msa0083890 | AT1G77690.1 | 23.843 | 432 | 275 | 15 | 34 | 444 | 20 | 418 | 2.14e-13 | 72.4 |
| Msa0083890 | AT2G21050.1 | 23.963 | 434 | 274 | 15 | 16 | 430 | 2 | 398 | 8.23e-13 | 70.9 |
Find 95 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATCCTTCTTCAAGTCTT+TGG | 0.187790 | 1_2:-63067740 | Msa0083890:CDS |
| GCAAAACTAACCTGGATTTC+TGG | 0.197396 | 1_2:+63068753 | None:intergenic |
| ATTCTAGCTAACTACATTAA+TGG | 0.228845 | 1_2:-63067815 | Msa0083890:CDS |
| GTGTTGCTATCTCTGGTTAT+TGG | 0.236584 | 1_2:-63067865 | Msa0083890:CDS |
| CTCCACATATAATGATAAAT+TGG | 0.244397 | 1_2:+63069112 | None:intergenic |
| ATATGCTTTGGGACAGTAAT+TGG | 0.247452 | 1_2:-63069319 | Msa0083890:CDS |
| GCCATTCTTTCCAGATATAA+TGG | 0.250563 | 1_2:-63067135 | Msa0083890:CDS |
| GTTGGTTTGGAGGAGTAATT+TGG | 0.258662 | 1_2:-63070033 | Msa0083890:CDS |
| TTCACTCTTCTGGGTTGGTT+TGG | 0.267371 | 1_2:-63070046 | Msa0083890:CDS |
| ATTGAAAACTGTCCTTTCTT+TGG | 0.270053 | 1_2:+63067230 | None:intergenic |
| CCAAACAATGCCATTATATC+TGG | 0.276029 | 1_2:+63067125 | None:intergenic |
| TAAAGCTTCATTGATCCTTC+TGG | 0.278033 | 1_2:+63069135 | None:intergenic |
| TGGAGTTGTAACTATGCTTT+TGG | 0.281191 | 1_2:-63069094 | Msa0083890:CDS |
| ATCTCTGGTTATTGGGCATT+TGG | 0.283481 | 1_2:-63067857 | Msa0083890:CDS |
| CCAAACAAGGCATAATCTAT+TGG | 0.285091 | 1_2:-63067034 | Msa0083890:CDS |
| TGTTGCTATCTCTGGTTATT+GGG | 0.292003 | 1_2:-63067864 | Msa0083890:CDS |
| TTCTAGCTAACTACATTAAT+GGG | 0.296570 | 1_2:-63067814 | Msa0083890:CDS |
| CCCAGAAGAGTGAATGAAAA+TGG | 0.300763 | 1_2:+63070055 | None:intergenic |
| CCAATAGATTATGCCTTGTT+TGG | 0.304670 | 1_2:+63067034 | None:intergenic |
| GATTCAAATAATTCATTTGT+TGG | 0.306422 | 1_2:+63067266 | None:intergenic |
| CCGAGAGAGTATTCTGTAAA+AGG | 0.306567 | 1_2:-63068852 | Msa0083890:CDS |
| TTCAATTTATCATATGCTTT+GGG | 0.330472 | 1_2:-63069330 | Msa0083890:CDS |
| GTAATTTGGTTGGTCCTTGC+AGG | 0.336273 | 1_2:-63070019 | Msa0083890:CDS |
| CCAGATATAATGGCATTGTT+TGG | 0.340494 | 1_2:-63067125 | Msa0083890:CDS |
| CTTCAATTTATCATATGCTT+TGG | 0.341049 | 1_2:-63069331 | Msa0083890:CDS |
| ACTCTTCTGGGTTGGTTTGG+AGG | 0.360871 | 1_2:-63070043 | Msa0083890:CDS |
| TATTGGGTGAATACATTGAT+TGG | 0.369575 | 1_2:-63067017 | Msa0083890:CDS |
| TATTTCAGTGTTGCTATCTC+TGG | 0.372416 | 1_2:-63067872 | Msa0083890:CDS |
| CCAGTTTAGATTCAGAGATA+TGG | 0.379682 | 1_2:-63069927 | Msa0083890:CDS |
| CAAACAAGGCATAATCTATT+GGG | 0.383365 | 1_2:-63067033 | Msa0083890:CDS |
| CCATATCTCTGAATCTAAAC+TGG | 0.388069 | 1_2:+63069927 | None:intergenic |
| TGGGCATTTGGAAATGAATC+TGG | 0.409926 | 1_2:-63067845 | Msa0083890:CDS |
| TATACAAGTGATAGTGAAAA+GGG | 0.415951 | 1_2:-63070316 | Msa0083890:CDS |
| GCCATTATATCTGGAAAGAA+TGG | 0.421778 | 1_2:+63067134 | None:intergenic |
| TTTCATTCACTCTTCTGGGT+TGG | 0.422245 | 1_2:-63070051 | Msa0083890:CDS |
| CTGTGCCAAGGGTGCTCTCT+AGG | 0.429242 | 1_2:-63067199 | Msa0083890:CDS |
| AAGTTTGTTCTTGTTTCTAA+AGG | 0.431928 | 1_2:-63070241 | Msa0083890:intron |
| AAACTGTTTGGTGTCTTCAA+TGG | 0.434041 | 1_2:-63068816 | Msa0083890:CDS |
| GTAATTGGTGGTCCTCTTGT+GGG | 0.436804 | 1_2:-63069304 | Msa0083890:CDS |
| TCTCATGAAGATAAACTGTT+TGG | 0.440619 | 1_2:-63068828 | Msa0083890:CDS |
| ATATACAAGTGATAGTGAAA+AGG | 0.456820 | 1_2:-63070317 | Msa0083890:CDS |
| TACCAATTTATCATTATATG+TGG | 0.457634 | 1_2:-63069114 | Msa0083890:CDS |
| ATCCTTCTGGATGGTAAAGT+TGG | 0.467861 | 1_2:+63069148 | None:intergenic |
| AGTAATTGGTGGTCCTCTTG+TGG | 0.471430 | 1_2:-63069305 | Msa0083890:CDS |
| AAGAAGGATGAGTATATTTG+TGG | 0.471445 | 1_2:+63067751 | None:intergenic |
| TAGATTATGCCTTGTTTGGA+AGG | 0.476875 | 1_2:+63067038 | None:intergenic |
| TCATTTGACAACATCTATTG+TGG | 0.482815 | 1_2:-63070098 | Msa0083890:CDS |
| CATTTGACAACATCTATTGT+GGG | 0.484467 | 1_2:-63070097 | Msa0083890:CDS |
| AAGAACTATTGCTTCCCAAA+TGG | 0.486675 | 1_2:-63067784 | Msa0083890:CDS |
| GATTCAGCAAGAAAATAAGA+TGG | 0.496713 | 1_2:-63070368 | Msa0083890:CDS |
| AACTTTGGCACCTCCTGTGA+AGG | 0.500740 | 1_2:-63067945 | Msa0083890:CDS |
| TGGGATTATTCCAGAAATCC+AGG | 0.501151 | 1_2:-63068763 | Msa0083890:intron |
| AATGGAAGTGTAAGAATCAC+TGG | 0.501324 | 1_2:+63070073 | None:intergenic |
| CCCTATCACAACTAAAATTG+AGG | 0.506614 | 1_2:+63066986 | None:intergenic |
| CATAATTATTTGCTAGCTCA+AGG | 0.512919 | 1_2:-63070437 | Msa0083890:five_prime_UTR |
| GTGAATACATTGATTGGAGG+AGG | 0.520319 | 1_2:-63067011 | Msa0083890:CDS |
| ACTTCACCTGAGTTAGATGC+AGG | 0.525979 | 1_2:-63070268 | Msa0083890:CDS |
| AATAATCCCACTAGCATATG+TGG | 0.533821 | 1_2:+63068776 | None:intergenic |
| TATCTCAAGGAGTGAAAGGA+TGG | 0.534203 | 1_2:+63069063 | None:intergenic |
| ATTCAGCAAGAAAATAAGAT+GGG | 0.537062 | 1_2:-63070367 | Msa0083890:CDS |
| ATTGACCTAGAGAGCACCCT+TGG | 0.539691 | 1_2:+63067194 | None:intergenic |
| CTCTGAATCTAAACTGGCGG+CGG | 0.546660 | 1_2:+63069933 | None:intergenic |
| TTAGAACATCATGCTCAACT+TGG | 0.548316 | 1_2:-63069956 | Msa0083890:CDS |
| AGACTCTTTCCTCCCACAAG+AGG | 0.553648 | 1_2:+63069292 | None:intergenic |
| TGGGTGAATACATTGATTGG+AGG | 0.555938 | 1_2:-63067014 | Msa0083890:CDS |
| TGCTTTGGGACAGTAATTGG+TGG | 0.556122 | 1_2:-63069316 | Msa0083890:CDS |
| AATGTATCTCAAGGAGTGAA+AGG | 0.559352 | 1_2:+63069059 | None:intergenic |
| ACTTTCAAGCCTTCCAAACA+AGG | 0.562223 | 1_2:-63067047 | Msa0083890:CDS |
| GTTTGGAGGAGTAATTTGGT+TGG | 0.564814 | 1_2:-63070029 | Msa0083890:CDS |
| AATCAGATTAATGTATCTCA+AGG | 0.567736 | 1_2:+63069050 | None:intergenic |
| GAAACATGTTTGAATGATGA+TGG | 0.573969 | 1_2:+63070546 | None:intergenic |
| TACCAACTTTACCATCCAGA+AGG | 0.580856 | 1_2:-63069150 | Msa0083890:CDS |
| TCAATCCAAAGACTTGAAGA+AGG | 0.582668 | 1_2:+63067735 | None:intergenic |
| AGCATATGATAAATTGAAGA+GGG | 0.583245 | 1_2:+63069335 | None:intergenic |
| TTGCTACCACATATGCTAGT+GGG | 0.592496 | 1_2:-63068782 | Msa0083890:CDS |
| CAATGCGCAATGCTGTGCCA+AGG | 0.592672 | 1_2:-63067211 | Msa0083890:CDS |
| TTTGCTCCTGCATCTAACTC+AGG | 0.601599 | 1_2:+63070262 | None:intergenic |
| ATTGCTACCACATATGCTAG+TGG | 0.604816 | 1_2:-63068783 | Msa0083890:CDS |
| TATGCAACATTTCTCACCGT+CGG | 0.606735 | 1_2:-63069006 | Msa0083890:CDS |
| ACTTTGGCACCTCCTGTGAA+GGG | 0.608006 | 1_2:-63067944 | Msa0083890:CDS |
| ATTGGCAAAATGAAATCTAG+AGG | 0.608137 | 1_2:+63067086 | None:intergenic |
| AAGCATATGATAAATTGAAG+AGG | 0.610873 | 1_2:+63069334 | None:intergenic |
| AATGCGCAATGCTGTGCCAA+GGG | 0.611647 | 1_2:-63067210 | Msa0083890:CDS |
| GCTTCATTGATCCTTCTGGA+TGG | 0.631067 | 1_2:+63069139 | None:intergenic |
| TGTGGGAGGAAAGAGTCTCA+AGG | 0.646216 | 1_2:-63069287 | Msa0083890:intron |
| TCAAGTCTTTGGATTGACTG+CGG | 0.653522 | 1_2:-63067729 | Msa0083890:intron |
| TGAATACATTGATTGGAGGA+GGG | 0.653687 | 1_2:-63067010 | Msa0083890:CDS |
| TATCTCTGAATCTAAACTGG+CGG | 0.664050 | 1_2:+63069930 | None:intergenic |
| TCTAGCTAACTACATTAATG+GGG | 0.669275 | 1_2:-63067813 | Msa0083890:CDS |
| AGAATGTGATCACTCCTGCA+AGG | 0.671411 | 1_2:+63070005 | None:intergenic |
| ATTGGTGGTCCTCTTGTGGG+AGG | 0.671489 | 1_2:-63069301 | Msa0083890:CDS |
| TTTACAGAATACTCTCTCGG+CGG | 0.727989 | 1_2:+63068855 | None:intergenic |
| ACCGACGTATATCGAGCCGA+CGG | 0.742222 | 1_2:+63068990 | None:intergenic |
| GTAGGATCATGGTTACACTG+TGG | 0.750740 | 1_2:-63070124 | Msa0083890:intron |
| ACCGTCGGCTCGATATACGT+CGG | 0.773213 | 1_2:-63068991 | Msa0083890:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATTAATTAATTTACTATA+TGG | - | chr1_2:63067243-63067262 | Msa0083890:CDS | 10.0% |
| !! | AATTAATTTACTATATGGTT+TGG | - | chr1_2:63067248-63067267 | Msa0083890:CDS | 15.0% |
| !! | ATAAGCATTACTATATAATA+AGG | + | chr1_2:63069998-63070017 | None:intergenic | 15.0% |
| !!! | GAATTATTTGAATCAATTTT+CGG | - | chr1_2:63070151-63070170 | Msa0083890:intron | 15.0% |
| !!! | ATAATCATTTTTACATATTC+AGG | + | chr1_2:63070509-63070528 | None:intergenic | 15.0% |
| !! | TGAATATGTAAAAATGATTA+TGG | - | chr1_2:63070508-63070527 | Msa0083890:five_prime_UTR | 15.0% |
| !!! | AAAGAAAGAAAAGTACTAAA+AGG | + | chr1_2:63067541-63067560 | None:intergenic | 20.0% |
| !!! | TCATTGTTGTTATTAATCAT+TGG | - | chr1_2:63067562-63067581 | Msa0083890:intron | 20.0% |
| !! | TTCAATTTATCATATGCTTT+GGG | - | chr1_2:63068078-63068097 | Msa0083890:intron | 20.0% |
| !! | TACCAATTTATCATTATATG+TGG | - | chr1_2:63068294-63068313 | Msa0083890:intron | 20.0% |
| !!! | AGAATTGATTTTGACATTTT+TGG | - | chr1_2:63068774-63068793 | Msa0083890:CDS | 20.0% |
| !!! | AATGTAAAGTGATTTTGATT+TGG | + | chr1_2:63068930-63068949 | None:intergenic | 20.0% |
| !! | AAATCAAAATCACTTTACAT+TGG | - | chr1_2:63068929-63068948 | Msa0083890:intron | 20.0% |
| !! | AAAGTGAGTTAAATGTTAAA+CGG | - | chr1_2:63069019-63069038 | Msa0083890:CDS | 20.0% |
| !! | ATCAAAATCAAAATCTCTTT+CGG | + | chr1_2:63069219-63069238 | None:intergenic | 20.0% |
| !!! | AAGAGATTTTGATTTTGATT+TGG | - | chr1_2:63069220-63069239 | Msa0083890:intron | 20.0% |
| !! | GATTTATTGAAATAAGCTTA+AGG | + | chr1_2:63069881-63069900 | None:intergenic | 20.0% |
| !! | TTATTTCAATAAATCTTCGA+TGG | - | chr1_2:63069886-63069905 | Msa0083890:intron | 20.0% |
| !! | TTATAACTTGATTATATTGC+AGG | - | chr1_2:63070108-63070127 | Msa0083890:CDS | 20.0% |
| !! | GATTCAAATAATTCATTTGT+TGG | + | chr1_2:63070145-63070164 | None:intergenic | 20.0% |
| !! | GTTATATTGTAAAAAACCAT+TGG | + | chr1_2:63070343-63070362 | None:intergenic | 20.0% |
| ! | ATTCAGCAAGAAAATAAGAT+GGG | - | chr1_2:63067041-63067060 | Msa0083890:CDS | 25.0% |
| !! | ATATACAAGTGATAGTGAAA+AGG | - | chr1_2:63067091-63067110 | Msa0083890:CDS | 25.0% |
| !! | TATACAAGTGATAGTGAAAA+GGG | - | chr1_2:63067092-63067111 | Msa0083890:CDS | 25.0% |
| !!! | AAGTTTGTTCTTGTTTCTAA+AGG | - | chr1_2:63067167-63067186 | Msa0083890:CDS | 25.0% |
| !! | TTTGGTTGTGTATATTTTGT+AGG | - | chr1_2:63067266-63067285 | Msa0083890:CDS | 25.0% |
| ! | AATATTGTGCTTATATGAGT+AGG | + | chr1_2:63067670-63067689 | None:intergenic | 25.0% |
| ! | GTAACTTAAAGTGACTAAAT+TGG | + | chr1_2:63067715-63067734 | None:intergenic | 25.0% |
| ! | AGCATATGATAAATTGAAGA+GGG | + | chr1_2:63068076-63068095 | None:intergenic | 25.0% |
| ! | AAGCATATGATAAATTGAAG+AGG | + | chr1_2:63068077-63068096 | None:intergenic | 25.0% |
| ! | CTTCAATTTATCATATGCTT+TGG | - | chr1_2:63068077-63068096 | Msa0083890:intron | 25.0% |
| ! | TCTCAAGGTAATAACATAAA+AGG | - | chr1_2:63068136-63068155 | Msa0083890:intron | 25.0% |
| ! | GAAACTATAGTATAAGAATG+TGG | + | chr1_2:63068198-63068217 | None:intergenic | 25.0% |
| ! | CTTATACTATAGTTTCACTA+AGG | - | chr1_2:63068202-63068221 | Msa0083890:intron | 25.0% |
| ! | CTCCACATATAATGATAAAT+TGG | + | chr1_2:63068299-63068318 | None:intergenic | 25.0% |
| ! | AATCAGATTAATGTATCTCA+AGG | + | chr1_2:63068361-63068380 | None:intergenic | 25.0% |
| ! | TAGAGAACAAATGTTGTAAA+TGG | - | chr1_2:63068696-63068715 | Msa0083890:intron | 25.0% |
| !!! | TTTTGTTTCACTTTATGAAG+AGG | - | chr1_2:63068730-63068749 | Msa0083890:intron | 25.0% |
| !!! | CACTTTAGAAACAATTTTGA+AGG | + | chr1_2:63068825-63068844 | None:intergenic | 25.0% |
| ! | AAGTTAAAAATCGATTGTAG+AGG | + | chr1_2:63068870-63068889 | None:intergenic | 25.0% |
| ! | AAGCTAAAAATCAATTGAAG+AGG | - | chr1_2:63069073-63069092 | Msa0083890:CDS | 25.0% |
| ! | TCTAACTTGAAGTTAGAATT+TGG | + | chr1_2:63069107-63069126 | None:intergenic | 25.0% |
| ! | TAGAATTGATTATGACATCT+TGG | + | chr1_2:63069170-63069189 | None:intergenic | 25.0% |
| !! | AGTCACTTGACATATATTTT+TGG | + | chr1_2:63069410-63069429 | None:intergenic | 25.0% |
| !! | ATTCTAGCTAACTACATTAA+TGG | - | chr1_2:63069593-63069612 | Msa0083890:intron | 25.0% |
| !! | TTCTAGCTAACTACATTAAT+GGG | - | chr1_2:63069594-63069613 | Msa0083890:intron | 25.0% |
| ! | ATGTATATGCATAACAGTTT+GGG | + | chr1_2:63069713-63069732 | None:intergenic | 25.0% |
| ! | AATGTATATGCATAACAGTT+TGG | + | chr1_2:63069714-63069733 | None:intergenic | 25.0% |
| ! | GAACTTATTTATAGCTTAGT+TGG | - | chr1_2:63069773-63069792 | Msa0083890:intron | 25.0% |
| ! | TAAATGTACATGTTACTGTT+TGG | - | chr1_2:63069811-63069830 | Msa0083890:intron | 25.0% |
| ! | TGAAAGAGTTTATGTTATGT+TGG | - | chr1_2:63069844-63069863 | Msa0083890:intron | 25.0% |
| ! | TCAAGTTATAATCATTCATC+AGG | + | chr1_2:63070099-63070118 | None:intergenic | 25.0% |
| GAAACATGTTTGAATGATGA+TGG | + | chr1_2:63066865-63066884 | None:intergenic | 30.0% | |
| ! | CATAATTATTTGCTAGCTCA+AGG | - | chr1_2:63066971-63066990 | Msa0083890:CDS | 30.0% |
| GATTCAGCAAGAAAATAAGA+TGG | - | chr1_2:63067040-63067059 | Msa0083890:CDS | 30.0% | |
| ! | GTGTATATTTTGTAGGATCA+TGG | - | chr1_2:63067273-63067292 | Msa0083890:CDS | 30.0% |
| TCATTTGACAACATCTATTG+TGG | - | chr1_2:63067310-63067329 | Msa0083890:intron | 30.0% | |
| CATTTGACAACATCTATTGT+GGG | - | chr1_2:63067311-63067330 | Msa0083890:intron | 30.0% | |
| ! | GATATGGCTAGAGATATTTT+AGG | - | chr1_2:63067497-63067516 | Msa0083890:intron | 30.0% |
| ATATGAGTAGGAATCAAACT+CGG | + | chr1_2:63067658-63067677 | None:intergenic | 30.0% | |
| !! | TCTCTGAAATTGTATACAGT+AGG | + | chr1_2:63067907-63067926 | None:intergenic | 30.0% |
| ! | ATATAGTATTTTGCCCATCT+TGG | + | chr1_2:63068050-63068069 | None:intergenic | 30.0% |
| AGATGGGCAAAATACTATAT+AGG | - | chr1_2:63068050-63068069 | Msa0083890:intron | 30.0% | |
| GTAAGGAGATAAAAACACAA+TGG | - | chr1_2:63068439-63068458 | Msa0083890:intron | 30.0% | |
| AGATAAAAACACAATGGCAT+TGG | - | chr1_2:63068445-63068464 | Msa0083890:intron | 30.0% | |
| TCTCATGAAGATAAACTGTT+TGG | - | chr1_2:63068580-63068599 | Msa0083890:intron | 30.0% | |
| AACAAAATGCAAAACTAACC+TGG | + | chr1_2:63068666-63068685 | None:intergenic | 30.0% | |
| TGGATACATTCACTGAAAAA+TGG | + | chr1_2:63068910-63068929 | None:intergenic | 30.0% | |
| GGATACAAAATCTATTCTAG+AGG | + | chr1_2:63069195-63069214 | None:intergenic | 30.0% | |
| AAAATCAAAATCTCTTTCGG+AGG | + | chr1_2:63069216-63069235 | None:intergenic | 30.0% | |
| CACAACTAAATAGTTGTGTT+TGG | + | chr1_2:63069345-63069364 | None:intergenic | 30.0% | |
| TTGGTTATTCTAAACTCACA+AGG | + | chr1_2:63069391-63069410 | None:intergenic | 30.0% | |
| !!! | CAGTTCTTGTGCAATTTTTT+AGG | - | chr1_2:63069439-63069458 | Msa0083890:intron | 30.0% |
| !!! | TGCAATTTTTTAGGCAACTT+TGG | - | chr1_2:63069448-63069467 | Msa0083890:intron | 30.0% |
| TCTAGCTAACTACATTAATG+GGG | - | chr1_2:63069595-63069614 | Msa0083890:intron | 30.0% | |
| AAGAAGGATGAGTATATTTG+TGG | + | chr1_2:63069660-63069679 | None:intergenic | 30.0% | |
| ! | TCAATTTTGCGATTCAAACT+CGG | - | chr1_2:63069736-63069755 | Msa0083890:intron | 30.0% |
| ! | TCCTCTTTGATAATAGACAT+AGG | - | chr1_2:63069928-63069947 | Msa0083890:CDS | 30.0% |
| ACCTATGTCTATTATCAAAG+AGG | + | chr1_2:63069932-63069951 | None:intergenic | 30.0% | |
| ATTGAAAACTGTCCTTTCTT+TGG | + | chr1_2:63070181-63070200 | None:intergenic | 30.0% | |
| ATTGGCAAAATGAAATCTAG+AGG | + | chr1_2:63070325-63070344 | None:intergenic | 30.0% | |
| ! | TCTAGATTTCATTTTGCCAA+TGG | - | chr1_2:63070324-63070343 | Msa0083890:CDS | 30.0% |
| CAAACAAGGCATAATCTATT+GGG | - | chr1_2:63070375-63070394 | Msa0083890:CDS | 30.0% | |
| TATTGGGTGAATACATTGAT+TGG | - | chr1_2:63070391-63070410 | Msa0083890:CDS | 30.0% | |
| !!! | TCCTCAATTTTAGTTGTGAT+AGG | - | chr1_2:63070421-63070440 | Msa0083890:exon | 30.0% |
| !!! | CCTCAATTTTAGTTGTGATA+GGG | - | chr1_2:63070422-63070441 | Msa0083890:exon | 30.0% |
| !!! | CTCAATTTTAGTTGTGATAG+GGG | - | chr1_2:63070423-63070442 | Msa0083890:exon | 30.0% |
| !!! | TCAATTTTAGTTGTGATAGG+GGG | - | chr1_2:63070424-63070443 | Msa0083890:exon | 30.0% |
| ! | AATGGAAGTGTAAGAATCAC+TGG | + | chr1_2:63067338-63067357 | None:intergenic | 35.0% |
| ! | TCCATTTTCATTCACTCTTC+TGG | - | chr1_2:63067352-63067371 | Msa0083890:intron | 35.0% |
| ! | CCATTTTCATTCACTCTTCT+GGG | - | chr1_2:63067353-63067372 | Msa0083890:intron | 35.0% |
| TTAGAACATCATGCTCAACT+TGG | - | chr1_2:63067452-63067471 | Msa0083890:intron | 35.0% | |
| TATCTCTGAATCTAAACTGG+CGG | + | chr1_2:63067481-63067500 | None:intergenic | 35.0% | |
| CCATATCTCTGAATCTAAAC+TGG | + | chr1_2:63067484-63067503 | None:intergenic | 35.0% | |
| CCAGTTTAGATTCAGAGATA+TGG | - | chr1_2:63067481-63067500 | Msa0083890:intron | 35.0% | |
| GAAATTGTATACAGTAGGCA+AGG | + | chr1_2:63067902-63067921 | None:intergenic | 35.0% | |
| !! | TGATGAGTTGCTTTGTTTGT+TGG | - | chr1_2:63067933-63067952 | Msa0083890:CDS | 35.0% |
| TTGCTTGAAAATGTTGTGAC+AGG | - | chr1_2:63068023-63068042 | Msa0083890:intron | 35.0% | |
| !! | ATATGCTTTGGGACAGTAAT+TGG | - | chr1_2:63068089-63068108 | Msa0083890:intron | 35.0% |
| TAAAGCTTCATTGATCCTTC+TGG | + | chr1_2:63068276-63068295 | None:intergenic | 35.0% | |
| ! | TGGAGTTGTAACTATGCTTT+TGG | - | chr1_2:63068314-63068333 | Msa0083890:intron | 35.0% |
| AATGTATCTCAAGGAGTGAA+AGG | + | chr1_2:63068352-63068371 | None:intergenic | 35.0% | |
| !! | AATTGACTGTGTTGATTGCA+TGG | - | chr1_2:63068503-63068522 | Msa0083890:intron | 35.0% |
| ! | CCTTTTACAGAATACTCTCT+CGG | + | chr1_2:63068559-63068578 | None:intergenic | 35.0% |
| !! | AAACTGTTTGGTGTCTTCAA+TGG | - | chr1_2:63068592-63068611 | Msa0083890:intron | 35.0% |
| AATAATCCCACTAGCATATG+TGG | + | chr1_2:63068635-63068654 | None:intergenic | 35.0% | |
| ! | TTGAACATTTTTCCCTTCAC+AGG | + | chr1_2:63069479-63069498 | None:intergenic | 35.0% |
| GTGAAGGGAAAAATGTTCAA+AGG | - | chr1_2:63069479-63069498 | Msa0083890:intron | 35.0% | |
| ! | TATTTCAGTGTTGCTATCTC+TGG | - | chr1_2:63069536-63069555 | Msa0083890:intron | 35.0% |
| TGTTGCTATCTCTGGTTATT+GGG | - | chr1_2:63069544-63069563 | Msa0083890:intron | 35.0% | |
| AAGAACTATTGCTTCCCAAA+TGG | - | chr1_2:63069624-63069643 | Msa0083890:intron | 35.0% | |
| GTGGTCAAGAAAAACCATTT+GGG | + | chr1_2:63069641-63069660 | None:intergenic | 35.0% | |
| TGTGGTCAAGAAAAACCATT+TGG | + | chr1_2:63069642-63069661 | None:intergenic | 35.0% | |
| TCAATCCAAAGACTTGAAGA+AGG | + | chr1_2:63069676-63069695 | None:intergenic | 35.0% | |
| ! | CAATTTTGCGATTCAAACTC+GGG | - | chr1_2:63069737-63069756 | Msa0083890:intron | 35.0% |
| ! | ATTTTCGGAGATCCAAAGAA+AGG | - | chr1_2:63070166-63070185 | Msa0083890:intron | 35.0% |
| GCCATTCTTTCCAGATATAA+TGG | - | chr1_2:63070273-63070292 | Msa0083890:CDS | 35.0% | |
| GCCATTATATCTGGAAAGAA+TGG | + | chr1_2:63070277-63070296 | None:intergenic | 35.0% | |
| CCAAACAATGCCATTATATC+TGG | + | chr1_2:63070286-63070305 | None:intergenic | 35.0% | |
| CCAGATATAATGGCATTGTT+TGG | - | chr1_2:63070283-63070302 | Msa0083890:CDS | 35.0% | |
| !! | TAGATTATGCCTTGTTTGGA+AGG | + | chr1_2:63070373-63070392 | None:intergenic | 35.0% |
| ! | CCAATAGATTATGCCTTGTT+TGG | + | chr1_2:63070377-63070396 | None:intergenic | 35.0% |
| CCAAACAAGGCATAATCTAT+TGG | - | chr1_2:63070374-63070393 | Msa0083890:CDS | 35.0% | |
| ! | TGAATACATTGATTGGAGGA+GGG | - | chr1_2:63070398-63070417 | Msa0083890:CDS | 35.0% |
| CCCTATCACAACTAAAATTG+AGG | + | chr1_2:63070425-63070444 | None:intergenic | 35.0% | |
| CCCAGAAGAGTGAATGAAAA+TGG | + | chr1_2:63067356-63067375 | None:intergenic | 40.0% | |
| TTTCATTCACTCTTCTGGGT+TGG | - | chr1_2:63067357-63067376 | Msa0083890:intron | 40.0% | |
| !! | GTTGGTTTGGAGGAGTAATT+TGG | - | chr1_2:63067375-63067394 | Msa0083890:intron | 40.0% |
| GTTTGGAGGAGTAATTTGGT+TGG | - | chr1_2:63067379-63067398 | Msa0083890:intron | 40.0% | |
| GACTAAATTGGCGATTCTCT+CGG | + | chr1_2:63067703-63067722 | None:intergenic | 40.0% | |
| !! | GTTGCTTTGTTTGTTGGACA+CGG | - | chr1_2:63067939-63067958 | Msa0083890:CDS | 40.0% |
| !! | TGTTTCGAACCTTTGAAGCA+CGG | + | chr1_2:63067995-63068014 | None:intergenic | 40.0% |
| TACCAACTTTACCATCCAGA+AGG | - | chr1_2:63068258-63068277 | Msa0083890:intron | 40.0% | |
| ATCCTTCTGGATGGTAAAGT+TGG | + | chr1_2:63068263-63068282 | None:intergenic | 40.0% | |
| TATCTCAAGGAGTGAAAGGA+TGG | + | chr1_2:63068348-63068367 | None:intergenic | 40.0% | |
| TATGCAACATTTCTCACCGT+CGG | - | chr1_2:63068402-63068421 | Msa0083890:intron | 40.0% | |
| TTTACAGAATACTCTCTCGG+CGG | + | chr1_2:63068556-63068575 | None:intergenic | 40.0% | |
| !! | CCGAGAGAGTATTCTGTAAA+AGG | - | chr1_2:63068556-63068575 | Msa0083890:intron | 40.0% |
| ATTGCTACCACATATGCTAG+TGG | - | chr1_2:63068625-63068644 | Msa0083890:intron | 40.0% | |
| TTGCTACCACATATGCTAGT+GGG | - | chr1_2:63068626-63068645 | Msa0083890:intron | 40.0% | |
| TGGGATTATTCCAGAAATCC+AGG | - | chr1_2:63068645-63068664 | Msa0083890:intron | 40.0% | |
| GCAAAACTAACCTGGATTTC+TGG | + | chr1_2:63068658-63068677 | None:intergenic | 40.0% | |
| !! | GACTCACTTTTGTGTGTACT+TGG | - | chr1_2:63068951-63068970 | Msa0083890:intron | 40.0% |
| !! | TTTGTGTGTACTTGGTTCTG+CGG | - | chr1_2:63068959-63068978 | Msa0083890:intron | 40.0% |
| ! | AACATTTTTCCCTTCACAGG+AGG | + | chr1_2:63069476-63069495 | None:intergenic | 40.0% |
| ! | GTGTTGCTATCTCTGGTTAT+TGG | - | chr1_2:63069543-63069562 | Msa0083890:intron | 40.0% |
| ATCTCTGGTTATTGGGCATT+TGG | - | chr1_2:63069551-63069570 | Msa0083890:intron | 40.0% | |
| TGGGCATTTGGAAATGAATC+TGG | - | chr1_2:63069563-63069582 | Msa0083890:intron | 40.0% | |
| CTCATCCTTCTTCAAGTCTT+TGG | - | chr1_2:63069668-63069687 | Msa0083890:intron | 40.0% | |
| TCAAGTCTTTGGATTGACTG+CGG | - | chr1_2:63069679-63069698 | Msa0083890:intron | 40.0% | |
| CAACATTGCTGCAAAAAGTG+TGG | + | chr1_2:63070254-63070273 | None:intergenic | 40.0% | |
| ACTTTCAAGCCTTCCAAACA+AGG | - | chr1_2:63070361-63070380 | Msa0083890:CDS | 40.0% | |
| ! | TGGGTGAATACATTGATTGG+AGG | - | chr1_2:63070394-63070413 | Msa0083890:CDS | 40.0% |
| ! | GTGAATACATTGATTGGAGG+AGG | - | chr1_2:63070397-63070416 | Msa0083890:CDS | 40.0% |
| ACTTCACCTGAGTTAGATGC+AGG | - | chr1_2:63067140-63067159 | Msa0083890:CDS | 45.0% | |
| TTTGCTCCTGCATCTAACTC+AGG | + | chr1_2:63067149-63067168 | None:intergenic | 45.0% | |
| GTAGGATCATGGTTACACTG+TGG | - | chr1_2:63067284-63067303 | Msa0083890:intron | 45.0% | |
| !! | TTCACTCTTCTGGGTTGGTT+TGG | - | chr1_2:63067362-63067381 | Msa0083890:intron | 45.0% |
| ! | GTAATTTGGTTGGTCCTTGC+AGG | - | chr1_2:63067389-63067408 | Msa0083890:intron | 45.0% |
| AGAATGTGATCACTCCTGCA+AGG | + | chr1_2:63067406-63067425 | None:intergenic | 45.0% | |
| TCATTGGACCACTAGTGCTA+AGG | - | chr1_2:63067578-63067597 | Msa0083890:intron | 45.0% | |
| ! | TTGTTTGTTGGACACGGACA+TGG | - | chr1_2:63067945-63067964 | Msa0083890:CDS | 45.0% |
| ATGTTGTGACAGGACCAAGA+TGG | - | chr1_2:63068033-63068052 | Msa0083890:intron | 45.0% | |
| TGTTGTGACAGGACCAAGAT+GGG | - | chr1_2:63068034-63068053 | Msa0083890:intron | 45.0% | |
| !! | TGCTTTGGGACAGTAATTGG+TGG | - | chr1_2:63068092-63068111 | Msa0083890:intron | 45.0% |
| ! | AGTAATTGGTGGTCCTCTTG+TGG | - | chr1_2:63068103-63068122 | Msa0083890:intron | 45.0% |
| ! | GTAATTGGTGGTCCTCTTGT+GGG | - | chr1_2:63068104-63068123 | Msa0083890:intron | 45.0% |
| GCTTCATTGATCCTTCTGGA+TGG | + | chr1_2:63068272-63068291 | None:intergenic | 45.0% | |
| TTGATTGCATGGTCCAATGC+AGG | - | chr1_2:63068514-63068533 | Msa0083890:intron | 45.0% | |
| ! | ATCTTTCGAGTGACCTGCAT+TGG | + | chr1_2:63068530-63068549 | None:intergenic | 45.0% |
| !! | ACTCTTCTGGGTTGGTTTGG+AGG | - | chr1_2:63067365-63067384 | Msa0083890:intron | 50.0% |
| CTCTGAATCTAAACTGGCGG+CGG | + | chr1_2:63067478-63067497 | None:intergenic | 50.0% | |
| TAAGGTCTAGCGCAAGTGGT+TGG | - | chr1_2:63067596-63067615 | Msa0083890:intron | 50.0% | |
| GCGATTCTCTCGGTTCAATC+AGG | + | chr1_2:63067693-63067712 | None:intergenic | 50.0% | |
| GGTGACACGTCTAATTCCAG+AGG | - | chr1_2:63067966-63067985 | Msa0083890:intron | 50.0% | |
| AGACTCTTTCCTCCCACAAG+AGG | + | chr1_2:63068119-63068138 | None:intergenic | 50.0% | |
| TGTGGGAGGAAAGAGTCTCA+AGG | - | chr1_2:63068121-63068140 | Msa0083890:intron | 50.0% | |
| AACTTTGGCACCTCCTGTGA+AGG | - | chr1_2:63069463-63069482 | Msa0083890:intron | 50.0% | |
| ACTTTGGCACCTCCTGTGAA+GGG | - | chr1_2:63069464-63069483 | Msa0083890:intron | 50.0% | |
| TTGCGATTCAAACTCGGGTG+CGG | - | chr1_2:63069742-63069761 | Msa0083890:intron | 50.0% | |
| AATGCGCAATGCTGTGCCAA+GGG | - | chr1_2:63070198-63070217 | Msa0083890:intron | 50.0% | |
| !! | ATTGACCTAGAGAGCACCCT+TGG | + | chr1_2:63070217-63070236 | None:intergenic | 50.0% |
| GCGCTAGACCTTAGCACTAG+TGG | + | chr1_2:63067589-63067608 | None:intergenic | 55.0% | |
| GTGCTAAGGTCTAGCGCAAG+TGG | - | chr1_2:63067592-63067611 | Msa0083890:intron | 55.0% | |
| !! | CTTTGAAGCACGGACACCTC+TGG | + | chr1_2:63067985-63068004 | None:intergenic | 55.0% |
| !! | CAGAGGTGTCCGTGCTTCAA+AGG | - | chr1_2:63067983-63068002 | Msa0083890:intron | 55.0% |
| ! | ATTGGTGGTCCTCTTGTGGG+AGG | - | chr1_2:63068107-63068126 | Msa0083890:intron | 55.0% |
| !! | ACCGTCGGCTCGATATACGT+CGG | - | chr1_2:63068417-63068436 | Msa0083890:intron | 55.0% |
| ACCGACGTATATCGAGCCGA+CGG | + | chr1_2:63068421-63068440 | None:intergenic | 55.0% | |
| CGGCTCGATATACGTCGGTA+AGG | - | chr1_2:63068422-63068441 | Msa0083890:intron | 55.0% | |
| TGCGATTCAAACTCGGGTGC+GGG | - | chr1_2:63069743-63069762 | Msa0083890:intron | 55.0% | |
| TTCAAACTCGGGTGCGGGTT+TGG | - | chr1_2:63069748-63069767 | Msa0083890:intron | 55.0% | |
| CAATGCGCAATGCTGTGCCA+AGG | - | chr1_2:63070197-63070216 | Msa0083890:intron | 55.0% | |
| !! | CTGTGCCAAGGGTGCTCTCT+AGG | - | chr1_2:63070209-63070228 | Msa0083890:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 63066848 | 63070582 | 63066848 | ID=Msa0083890;Name=Msa0083890 |
| chr1_2 | mRNA | 63066848 | 63070582 | 63066848 | ID=Msa0083890-mRNA-1;Parent=Msa0083890;Name=Msa0083890-mRNA-1;_AED=0.13;_eAED=0.13;_QI=157|0.83|0.85|1|1|1|7|72|474 |
| chr1_2 | exon | 63066848 | 63067300 | 63066848 | ID=Msa0083890-mRNA-1:exon:21100;Parent=Msa0083890-mRNA-1 |
| chr1_2 | exon | 63067730 | 63067969 | 63067730 | ID=Msa0083890-mRNA-1:exon:21099;Parent=Msa0083890-mRNA-1 |
| chr1_2 | exon | 63068764 | 63068894 | 63068764 | ID=Msa0083890-mRNA-1:exon:21098;Parent=Msa0083890-mRNA-1 |
| chr1_2 | exon | 63068992 | 63069178 | 63068992 | ID=Msa0083890-mRNA-1:exon:21097;Parent=Msa0083890-mRNA-1 |
| chr1_2 | exon | 63069288 | 63069358 | 63069288 | ID=Msa0083890-mRNA-1:exon:21096;Parent=Msa0083890-mRNA-1 |
| chr1_2 | exon | 63069912 | 63070142 | 63069912 | ID=Msa0083890-mRNA-1:exon:21095;Parent=Msa0083890-mRNA-1 |
| chr1_2 | exon | 63070242 | 63070582 | 63070242 | ID=Msa0083890-mRNA-1:exon:21094;Parent=Msa0083890-mRNA-1 |
| chr1_2 | five_prime_UTR | 63070426 | 63070582 | 63070426 | ID=Msa0083890-mRNA-1:five_prime_utr;Parent=Msa0083890-mRNA-1 |
| chr1_2 | CDS | 63070242 | 63070425 | 63070242 | ID=Msa0083890-mRNA-1:cds;Parent=Msa0083890-mRNA-1 |
| chr1_2 | CDS | 63069912 | 63070142 | 63069912 | ID=Msa0083890-mRNA-1:cds;Parent=Msa0083890-mRNA-1 |
| chr1_2 | CDS | 63069288 | 63069358 | 63069288 | ID=Msa0083890-mRNA-1:cds;Parent=Msa0083890-mRNA-1 |
| chr1_2 | CDS | 63068992 | 63069178 | 63068992 | ID=Msa0083890-mRNA-1:cds;Parent=Msa0083890-mRNA-1 |
| chr1_2 | CDS | 63068764 | 63068894 | 63068764 | ID=Msa0083890-mRNA-1:cds;Parent=Msa0083890-mRNA-1 |
| chr1_2 | CDS | 63067730 | 63067969 | 63067730 | ID=Msa0083890-mRNA-1:cds;Parent=Msa0083890-mRNA-1 |
| chr1_2 | CDS | 63066920 | 63067300 | 63066920 | ID=Msa0083890-mRNA-1:cds;Parent=Msa0083890-mRNA-1 |
| chr1_2 | three_prime_UTR | 63066848 | 63066919 | 63066848 | ID=Msa0083890-mRNA-1:three_prime_utr;Parent=Msa0083890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
