Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1234120 | XP_003627265.1 | 100.000 | 95 | 0 | 0 | 1 | 95 | 1 | 95 | 5.28e-64 | 198 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1234120 | sp|Q1SF86|ATG12_MEDTR | 100.000 | 95 | 0 | 0 | 1 | 95 | 1 | 95 | 6.59e-67 | 198 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1234120 | G7L6T7 | 100.000 | 95 | 0 | 0 | 1 | 95 | 1 | 95 | 2.52e-64 | 198 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0036140 | Msa1234120 | 0.803860 | 2.849486e-49 | -8.615850e-47 |
| Msa0688070 | Msa1234120 | 0.828581 | 8.304686e-55 | -8.615850e-47 |
| Msa0744170 | Msa1234120 | -0.801507 | 8.716810e-49 | -8.615850e-47 |
| Msa0816590 | Msa1234120 | 0.804948 | 1.690387e-49 | -8.615850e-47 |
| Msa0827350 | Msa1234120 | -0.802498 | 5.452918e-49 | -8.615850e-47 |
| Msa0840380 | Msa1234120 | 0.823589 | 1.277085e-53 | -8.615850e-47 |
| Msa0217680 | Msa1234120 | 0.800195 | 1.615107e-48 | -8.615850e-47 |
| Msa1234120 | Msa1276440 | 0.809166 | 2.164382e-50 | -8.615850e-47 |
| Msa1234120 | Msa1325860 | -0.825179 | 5.396423e-54 | -8.615850e-47 |
| Msa1234120 | Msa1331000 | 0.803372 | 3.597589e-49 | -8.615850e-47 |
| Msa1234120 | Msa1373430 | -0.820897 | 5.381227e-53 | -8.615850e-47 |
| Msa1234120 | Msa1403890 | 0.802646 | 5.083191e-49 | -8.615850e-47 |
| Msa1234120 | Msa1406110 | -0.800063 | 1.717772e-48 | -8.615850e-47 |
| Msa1234120 | Msa1460050 | 0.801693 | 7.982398e-49 | -8.615850e-47 |
| Msa0433410 | Msa1234120 | -0.801272 | 9.737945e-49 | -8.615850e-47 |
| Msa0472960 | Msa1234120 | -0.805945 | 1.044693e-49 | -8.615850e-47 |
| Msa0477130 | Msa1234120 | -0.828092 | 1.089428e-54 | -8.615850e-47 |
| Msa1026410 | Msa1234120 | 0.810146 | 1.332601e-50 | -8.615850e-47 |
| Msa1124540 | Msa1234120 | -0.835830 | 1.335244e-56 | -8.615850e-47 |
| Msa1183100 | Msa1234120 | -0.821695 | 3.521279e-53 | -8.615850e-47 |
| Msa1204530 | Msa1234120 | 0.801142 | 1.035165e-48 | -8.615850e-47 |
| Msa1224480 | Msa1234120 | 0.830734 | 2.485073e-55 | -8.615850e-47 |
| Msa0579200 | Msa1234120 | 0.810439 | 1.152216e-50 | -8.615850e-47 |
| Msa0864470 | Msa1234120 | -0.801183 | 1.015580e-48 | -8.615850e-47 |
| Msa0876850 | Msa1234120 | -0.824288 | 8.755635e-54 | -8.615850e-47 |
| Msa0946690 | Msa1234120 | -0.809750 | 1.621492e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1234120 | MtrunA17_Chr8g0343841 | 100.000 | 95 | 0 | 0 | 1 | 95 | 1 | 95 | 4.85e-68 | 198 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1234120 | AT1G54210.3 | 91.304 | 92 | 8 | 0 | 4 | 95 | 5 | 96 | 1.40e-59 | 177 |
| Msa1234120 | AT1G54210.1 | 91.304 | 92 | 8 | 0 | 4 | 95 | 5 | 96 | 1.40e-59 | 177 |
| Msa1234120 | AT3G13970.1 | 87.097 | 93 | 12 | 0 | 3 | 95 | 2 | 94 | 1.24e-58 | 175 |
| Msa1234120 | AT3G13970.4 | 83.784 | 74 | 12 | 0 | 3 | 76 | 2 | 75 | 6.53e-42 | 132 |
| Msa1234120 | AT3G13970.3 | 76.364 | 55 | 13 | 0 | 3 | 57 | 2 | 56 | 4.59e-26 | 92.0 |
| Msa1234120 | AT3G13970.2 | 76.364 | 55 | 13 | 0 | 3 | 57 | 2 | 56 | 4.59e-26 | 92.0 |
| Msa1234120 | AT1G54210.2 | 47.826 | 92 | 4 | 1 | 4 | 95 | 5 | 52 | 1.00e-19 | 75.5 |
Find 43 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAATATATATTCACATTT+TGG | 0.133512 | 8_2:-11295395 | None:intergenic |
| AAGGAAAAGTACCTTGAATT+TGG | 0.149821 | 8_2:-11291958 | None:intergenic |
| AGTTCTTCTTCACAGAAAAT+AGG | 0.214719 | 8_2:+11291731 | Msa1234120:intron |
| TCAGTGTTCGTTCTTCTTCA+TGG | 0.287098 | 8_2:+11291757 | Msa1234120:exon |
| GTTCTTCTTCACAGAAAATA+GGG | 0.316856 | 8_2:+11291732 | Msa1234120:intron |
| CTATTATGTCAATTTAGTTA+TGG | 0.352557 | 8_2:+11295647 | Msa1234120:three_prime_UTR |
| TGTCAACTACGCTTGTTCTA+TGG | 0.365283 | 8_2:+11295321 | Msa1234120:CDS |
| AAATATATTAACTCTAACTT+TGG | 0.369798 | 8_2:-11295815 | None:intergenic |
| AAATCAATGACCAGTTCATC+AGG | 0.379567 | 8_2:-11294021 | None:intergenic |
| TTCACCGAACCCTGATGAAC+TGG | 0.388516 | 8_2:+11294011 | Msa1234120:CDS |
| TGATAGATGGAGTAAAGAAA+AGG | 0.390540 | 8_2:-11291566 | None:intergenic |
| AGATTCTTGCAAGGTAGAAA+TGG | 0.402897 | 8_2:+11295503 | Msa1234120:three_prime_UTR |
| AATTTGGATTGTTTGAGAAT+AGG | 0.414865 | 8_2:-11291942 | None:intergenic |
| TCTCAAACAATCCAAATTCA+AGG | 0.437260 | 8_2:+11291947 | Msa1234120:CDS |
| CTACGCTTGTTCTATGGCAT+GGG | 0.441506 | 8_2:+11295327 | Msa1234120:CDS |
| ACAGCTCCACAGGGAGTCAT+TGG | 0.444257 | 8_2:+11293884 | Msa1234120:CDS |
| TTCTTCGCAGACAGCTCCAC+AGG | 0.454460 | 8_2:+11293874 | Msa1234120:CDS |
| GTCAATTTAGTTATGGATGA+TGG | 0.461598 | 8_2:+11295654 | Msa1234120:three_prime_UTR |
| ACTACGCTTGTTCTATGGCA+TGG | 0.480273 | 8_2:+11295326 | Msa1234120:CDS |
| TATTTAAGCTCAAAGTGAGT+AGG | 0.481832 | 8_2:-11295766 | None:intergenic |
| TATTTGACATGGCAGATAGC+TGG | 0.490328 | 8_2:+11293822 | Msa1234120:intron |
| GATAGATGGAGTAAAGAAAA+GGG | 0.495512 | 8_2:-11291565 | None:intergenic |
| TAACCTTTACGAACAGAAGT+TGG | 0.498862 | 8_2:-11291794 | None:intergenic |
| ATCTGAAGTTTGAGAAAGGA+AGG | 0.503034 | 8_2:+11291644 | Msa1234120:five_prime_UTR |
| TCTCCAACTTCTGTTCGTAA+AGG | 0.513941 | 8_2:+11291791 | Msa1234120:CDS |
| AACGTGAAGGTTGAGAAAAC+AGG | 0.515362 | 8_2:+11291675 | Msa1234120:five_prime_UTR |
| ATGACCAGTTCATCAGGGTT+CGG | 0.516263 | 8_2:-11294015 | None:intergenic |
| TAAAGACACTCCTAAAATGA+AGG | 0.519006 | 8_2:-11295572 | None:intergenic |
| ATTTAAGCTCAAAGTGAGTA+GGG | 0.520008 | 8_2:-11295765 | None:intergenic |
| TTAGGAGTGTCTTTACATGT+TGG | 0.543666 | 8_2:+11295580 | Msa1234120:three_prime_UTR |
| TCAGATCTGAAGTTTGAGAA+AGG | 0.555866 | 8_2:+11291640 | Msa1234120:five_prime_UTR |
| GTTGTTCATCTTAGAGCCAC+CGG | 0.557111 | 8_2:+11291912 | Msa1234120:CDS |
| TTTGAGAATAGGAGCATCAC+CGG | 0.562343 | 8_2:-11291931 | None:intergenic |
| GCGAAGAAAGTCTATCACTT+TGG | 0.564644 | 8_2:-11293859 | None:intergenic |
| AATTTAGTTATGGATGATGG+TGG | 0.593049 | 8_2:+11295657 | Msa1234120:three_prime_UTR |
| TGAACTTAAAGATTCTTGCA+AGG | 0.614557 | 8_2:+11295494 | Msa1234120:three_prime_UTR |
| AATCAATGACCAGTTCATCA+GGG | 0.626890 | 8_2:-11294020 | None:intergenic |
| TCTTCGCAGACAGCTCCACA+GGG | 0.645509 | 8_2:+11293875 | Msa1234120:CDS |
| TACGCTTGTTCTATGGCATG+GGG | 0.656505 | 8_2:+11295328 | Msa1234120:CDS |
| GAAGGAGAGAACGAACGTGA+AGG | 0.658917 | 8_2:+11291662 | Msa1234120:five_prime_UTR |
| GAGAATAGGAGCATCACCGG+TGG | 0.697312 | 8_2:-11291928 | None:intergenic |
| TGTTTACCAATGACTCCCTG+TGG | 0.715702 | 8_2:-11293890 | None:intergenic |
| TGAGTTTGTGCTGAAACGTG+TGG | 0.728837 | 8_2:-11295433 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAAAAA+AGG | - | chr8_2:11292734-11292753 | None:intergenic | 0.0% |
| !! | AAAAAAAAAAAAAAAAGGTT+TGG | - | chr8_2:11292730-11292749 | None:intergenic | 10.0% |
| !!! | TACTTTTCCTTTTTAATTAA+TGG | + | chr8_2:11291970-11291989 | Msa1234120:intron | 15.0% |
| !!! | ACTTTTCCTTTTTAATTAAT+GGG | + | chr8_2:11291971-11291990 | Msa1234120:intron | 15.0% |
| !!! | TTCTATGATTTTCAATAAAT+TGG | + | chr8_2:11292134-11292153 | Msa1234120:intron | 15.0% |
| !!! | TCTATGATTTTCAATAAATT+GGG | + | chr8_2:11292135-11292154 | Msa1234120:intron | 15.0% |
| !! | AAAATTAATGTTGAAATTTG+GGG | - | chr8_2:11293777-11293796 | None:intergenic | 15.0% |
| !! | CAAAATTAATGTTGAAATTT+GGG | - | chr8_2:11293778-11293797 | None:intergenic | 15.0% |
| !! | TCAAAATTAATGTTGAAATT+TGG | - | chr8_2:11293779-11293798 | None:intergenic | 15.0% |
| !! | TGTATAATGTAAGAAATTAT+TGG | + | chr8_2:11294043-11294062 | Msa1234120:intron | 15.0% |
| !! | AATGAAGATATTAAAAACAA+AGG | - | chr8_2:11294079-11294098 | None:intergenic | 15.0% |
| !!! | ATATGACATTTTATTTTTTG+AGG | + | chr8_2:11294341-11294360 | Msa1234120:intron | 15.0% |
| !! | AAAATTAATGTGTAATTAGT+AGG | + | chr8_2:11294408-11294427 | Msa1234120:intron | 15.0% |
| !! | TATAAAAAGGGATAAAATAT+GGG | - | chr8_2:11295164-11295183 | None:intergenic | 15.0% |
| !! | ATATAAAAAGGGATAAAATA+TGG | - | chr8_2:11295165-11295184 | None:intergenic | 15.0% |
| !! | ACTCTAACATAATATAAAAA+GGG | - | chr8_2:11295176-11295195 | None:intergenic | 15.0% |
| !! | TACTCTAACATAATATAAAA+AGG | - | chr8_2:11295177-11295196 | None:intergenic | 15.0% |
| !!! | AACAATATATATTCACATTT+TGG | - | chr8_2:11295398-11295417 | None:intergenic | 15.0% |
| !! | AAATATATTAACTCTAACTT+TGG | - | chr8_2:11295818-11295837 | None:intergenic | 15.0% |
| !! | AAAAGACCCATTAATTAAAA+AGG | - | chr8_2:11291980-11291999 | None:intergenic | 20.0% |
| !! | TCAAATCAAATTAAGATCAA+GGG | - | chr8_2:11292357-11292376 | None:intergenic | 20.0% |
| !! | ATCAAATCAAATTAAGATCA+AGG | - | chr8_2:11292358-11292377 | None:intergenic | 20.0% |
| !! | ATCTTGGAAAATTTAAATAC+AGG | - | chr8_2:11292401-11292420 | None:intergenic | 20.0% |
| !!! | GTATTTAAATTTTCCAAGAT+AGG | + | chr8_2:11292401-11292420 | Msa1234120:intron | 20.0% |
| !! | TAGATAAATAATAGCATGTT+TGG | + | chr8_2:11292442-11292461 | Msa1234120:intron | 20.0% |
| !! | ATATGTTTGGAAACTAATTT+GGG | - | chr8_2:11292778-11292797 | None:intergenic | 20.0% |
| !! | AATATGTTTGGAAACTAATT+TGG | - | chr8_2:11292779-11292798 | None:intergenic | 20.0% |
| !!! | TACTTTCTCTCTTTATTTTT+AGG | + | chr8_2:11292865-11292884 | Msa1234120:intron | 20.0% |
| !! | AAATAATAACTTTCAGAGTT+CGG | - | chr8_2:11293498-11293517 | None:intergenic | 20.0% |
| !! | TAACAAGTATTCTTAATTGT+TGG | + | chr8_2:11293561-11293580 | Msa1234120:intron | 20.0% |
| !!! | ATACTTATCACATTTTCTAT+GGG | - | chr8_2:11294466-11294485 | None:intergenic | 20.0% |
| !! | AGATAGAGATTTGATTATTA+TGG | - | chr8_2:11294600-11294619 | None:intergenic | 20.0% |
| !! | TAAGAGAAAATGAAAACATA+AGG | - | chr8_2:11295254-11295273 | None:intergenic | 20.0% |
| !!! | TATGTTTTCATTTTCTCTTA+TGG | + | chr8_2:11295254-11295273 | Msa1234120:intron | 20.0% |
| !!! | ATGTTTTCATTTTCTCTTAT+GGG | + | chr8_2:11295255-11295274 | Msa1234120:intron | 20.0% |
| !!! | AAAATTCTGAAAAATCAAAG+TGG | - | chr8_2:11295281-11295300 | None:intergenic | 20.0% |
| !!! | ACTTTGATTTTTCAGAATTT+TGG | + | chr8_2:11295280-11295299 | Msa1234120:intron | 20.0% |
| !! | ATGAATAAAAACTAAAAGTG+TGG | - | chr8_2:11295608-11295627 | None:intergenic | 20.0% |
| !!! | TTATTCATGCCTTATTTTTT+TGG | + | chr8_2:11295620-11295639 | Msa1234120:three_prime_UTR | 20.0% |
| !!! | TATTCATGCCTTATTTTTTT+GGG | + | chr8_2:11295621-11295640 | Msa1234120:three_prime_UTR | 20.0% |
| !! | AATAGATTCCCAAAAAAATA+AGG | - | chr8_2:11295632-11295651 | None:intergenic | 20.0% |
| !! | CTATTATGTCAATTTAGTTA+TGG | + | chr8_2:11295647-11295666 | Msa1234120:three_prime_UTR | 20.0% |
| !! | TTTTTATCTTTTTGTGACAG+TGG | + | chr8_2:11291890-11291909 | Msa1234120:intron | 25.0% |
| ! | AATTTGGATTGTTTGAGAAT+AGG | - | chr8_2:11291945-11291964 | None:intergenic | 25.0% |
| ! | TTGGTTATGGTTTATTTGTT+TGG | + | chr8_2:11292060-11292079 | Msa1234120:intron | 25.0% |
| ! | CTTTGTATTAAATAGCACAT+TGG | - | chr8_2:11292579-11292598 | None:intergenic | 25.0% |
| ! | CCTACAACATTTAATATGTT+TGG | - | chr8_2:11292791-11292810 | None:intergenic | 25.0% |
| ! | CCAAACATATTAAATGTTGT+AGG | + | chr8_2:11292788-11292807 | Msa1234120:intron | 25.0% |
| ! | TGGTATTAACTGTAATTGAA+TGG | + | chr8_2:11292965-11292984 | Msa1234120:intron | 25.0% |
| ! | TTATAGTTTCTTGCCTATAA+TGG | + | chr8_2:11293014-11293033 | Msa1234120:intron | 25.0% |
| ! | TATAGTTTCTTGCCTATAAT+GGG | + | chr8_2:11293015-11293034 | Msa1234120:intron | 25.0% |
| ! | ATTAAAAACTATACTCCACT+AGG | + | chr8_2:11293223-11293242 | Msa1234120:intron | 25.0% |
| ! | AACAAGTTTGATAGAATCAA+TGG | - | chr8_2:11293284-11293303 | None:intergenic | 25.0% |
| ! | AGAGCAAAATGTTTGTATAT+AGG | + | chr8_2:11293304-11293323 | Msa1234120:intron | 25.0% |
| ! | CTTGAGAAAAGTTTATAAAG+AGG | + | chr8_2:11293706-11293725 | Msa1234120:intron | 25.0% |
| ! | ACTTACATACATATTTGACA+TGG | + | chr8_2:11293811-11293830 | Msa1234120:intron | 25.0% |
| ! | TTGTTGTGTAAAAACTGTAT+AGG | + | chr8_2:11294178-11294197 | Msa1234120:intron | 25.0% |
| ! | AACTGTATAGGAAAAATTGT+AGG | + | chr8_2:11294190-11294209 | Msa1234120:intron | 25.0% |
| !! | TGGCAAAAACATAAACTTTT+TGG | + | chr8_2:11294243-11294262 | Msa1234120:intron | 25.0% |
| ! | CTATAATTAACAAGAAGCAA+AGG | - | chr8_2:11294301-11294320 | None:intergenic | 25.0% |
| !!! | TGACATTTTATTTTTTGAGG+TGG | + | chr8_2:11294344-11294363 | Msa1234120:intron | 25.0% |
| !!! | GACATTTTATTTTTTGAGGT+GGG | + | chr8_2:11294345-11294364 | Msa1234120:intron | 25.0% |
| !!! | ACATTTTATTTTTTGAGGTG+GGG | + | chr8_2:11294346-11294365 | Msa1234120:intron | 25.0% |
| !! | GATACTTATCACATTTTCTA+TGG | - | chr8_2:11294467-11294486 | None:intergenic | 25.0% |
| ! | TTATCAATTGGTATTATTGC+TGG | - | chr8_2:11294720-11294739 | None:intergenic | 25.0% |
| !!! | GATATTTAGCTTTTAATGGA+GGG | - | chr8_2:11294763-11294782 | None:intergenic | 25.0% |
| !!! | TGATATTTAGCTTTTAATGG+AGG | - | chr8_2:11294764-11294783 | None:intergenic | 25.0% |
| ! | TCCATTAAAAGCTAAATATC+AGG | + | chr8_2:11294763-11294782 | Msa1234120:intron | 25.0% |
| ! | CCATTAAAAGCTAAATATCA+GGG | + | chr8_2:11294764-11294783 | Msa1234120:intron | 25.0% |
| ! | CATTAAAAGCTAAATATCAG+GGG | + | chr8_2:11294765-11294784 | Msa1234120:intron | 25.0% |
| ! | ATTAAAAGCTAAATATCAGG+GGG | + | chr8_2:11294766-11294785 | Msa1234120:intron | 25.0% |
| ! | ATTAAGTAGTATGAAATGCT+TGG | - | chr8_2:11294821-11294840 | None:intergenic | 25.0% |
| ! | AAGCATTTCATACTACTTAA+TGG | + | chr8_2:11294820-11294839 | Msa1234120:intron | 25.0% |
| ! | AGCATTTCATACTACTTAAT+GGG | + | chr8_2:11294821-11294840 | Msa1234120:intron | 25.0% |
| ! | TTTACATGAAATAAATCTGC+TGG | - | chr8_2:11294890-11294909 | None:intergenic | 25.0% |
| ! | GCAGATTTATTTCATGTAAA+TGG | + | chr8_2:11294890-11294909 | Msa1234120:intron | 25.0% |
| !!! | TACTACTGTTTCTGAAATTT+AGG | - | chr8_2:11295036-11295055 | None:intergenic | 25.0% |
| ! | AAATGGAGCAAAAATTAACA+CGG | + | chr8_2:11295520-11295539 | Msa1234120:three_prime_UTR | 25.0% |
| !!! | ATTTGAAATGCCTTCATTTT+AGG | + | chr8_2:11295562-11295581 | Msa1234120:three_prime_UTR | 25.0% |
| TCTTCAAAAATCTGGAAAAG+AGG | + | chr8_2:11291515-11291534 | Msa1234120:five_prime_UTR | 30.0% | |
| AAAAATCTGGAAAAGAGGAA+GGG | + | chr8_2:11291520-11291539 | Msa1234120:five_prime_UTR | 30.0% | |
| GATAGATGGAGTAAAGAAAA+GGG | - | chr8_2:11291568-11291587 | None:intergenic | 30.0% | |
| TGATAGATGGAGTAAAGAAA+AGG | - | chr8_2:11291569-11291588 | None:intergenic | 30.0% | |
| TGTTGTTGTAGTTTGATAGA+TGG | - | chr8_2:11291582-11291601 | None:intergenic | 30.0% | |
| AGTTCTTCTTCACAGAAAAT+AGG | + | chr8_2:11291731-11291750 | Msa1234120:intron | 30.0% | |
| GTTCTTCTTCACAGAAAATA+GGG | + | chr8_2:11291732-11291751 | Msa1234120:intron | 30.0% | |
| TCTCAAACAATCCAAATTCA+AGG | + | chr8_2:11291947-11291966 | Msa1234120:CDS | 30.0% | |
| !! | AAGGAAAAGTACCTTGAATT+TGG | - | chr8_2:11291961-11291980 | None:intergenic | 30.0% |
| ACCAACAAACATGATCAAAA+GGG | - | chr8_2:11292045-11292064 | None:intergenic | 30.0% | |
| AACCAACAAACATGATCAAA+AGG | - | chr8_2:11292046-11292065 | None:intergenic | 30.0% | |
| ! | TTGATCATGTTTGTTGGTTA+TGG | + | chr8_2:11292047-11292066 | Msa1234120:intron | 30.0% |
| GAATTGAAATTCAAGCTTCT+GGG | + | chr8_2:11292082-11292101 | Msa1234120:intron | 30.0% | |
| AAAAAATGTTCAGTTGAGCT+AGG | - | chr8_2:11292225-11292244 | None:intergenic | 30.0% | |
| !!! | ACTGAACATTTTTTGTTACC+CGG | + | chr8_2:11292231-11292250 | Msa1234120:intron | 30.0% |
| AATTAAGATCAAGGGCAATA+GGG | - | chr8_2:11292349-11292368 | None:intergenic | 30.0% | |
| AAATTAAGATCAAGGGCAAT+AGG | - | chr8_2:11292350-11292369 | None:intergenic | 30.0% | |
| GATTATGTTAACTCCTATCT+TGG | - | chr8_2:11292417-11292436 | None:intergenic | 30.0% | |
| TTTGGAAATCCTAATTTCTG+CGG | - | chr8_2:11292712-11292731 | None:intergenic | 30.0% | |
| TAACTGTGAGAAATTCAATG+TGG | + | chr8_2:11292816-11292835 | Msa1234120:intron | 30.0% | |
| TGAGAAATTCAATGTGGTTT+AGG | + | chr8_2:11292822-11292841 | Msa1234120:intron | 30.0% | |
| !!! | CTCTTTATTTTTAGGTGAGA+AGG | + | chr8_2:11292873-11292892 | Msa1234120:intron | 30.0% |
| !! | AATGGCATTGCAATTTGTTA+GGG | + | chr8_2:11292905-11292924 | Msa1234120:intron | 30.0% |
| TGGAGTAGTCCAATTATTAA+AGG | + | chr8_2:11293048-11293067 | Msa1234120:intron | 30.0% | |
| CACTCTCAACCTTTAATAAT+TGG | - | chr8_2:11293060-11293079 | None:intergenic | 30.0% | |
| GTGAATCATTTCCAAAAGTT+TGG | - | chr8_2:11293099-11293118 | None:intergenic | 30.0% | |
| ! | TCTAAAATGAAATGCGGTAT+AGG | - | chr8_2:11293369-11293388 | None:intergenic | 30.0% |
| ! | AGTGCATCTAAAATGAAATG+CGG | - | chr8_2:11293375-11293394 | None:intergenic | 30.0% |
| TTCTCAGATATGAAAAATGC+TGG | + | chr8_2:11293438-11293457 | Msa1234120:intron | 30.0% | |
| ! | AGATATGAAAAATGCTGGTT+TGG | + | chr8_2:11293443-11293462 | Msa1234120:intron | 30.0% |
| !! | GATATGAAAAATGCTGGTTT+GGG | + | chr8_2:11293444-11293463 | Msa1234120:intron | 30.0% |
| !! | ATATGAAAAATGCTGGTTTG+GGG | + | chr8_2:11293445-11293464 | Msa1234120:intron | 30.0% |
| GAGAAAAGTTTATAAAGAGG+AGG | + | chr8_2:11293709-11293728 | Msa1234120:intron | 30.0% | |
| ATATTAATAACCGCAAAACC+AGG | - | chr8_2:11294128-11294147 | None:intergenic | 30.0% | |
| ATAGGAAAAATTGTAGGTGT+AGG | + | chr8_2:11294196-11294215 | Msa1234120:intron | 30.0% | |
| ACAAAGAGATATCCACAAAA+AGG | - | chr8_2:11294222-11294241 | None:intergenic | 30.0% | |
| TTTGTGGATATCTCTTTGTT+TGG | + | chr8_2:11294223-11294242 | Msa1234120:intron | 30.0% | |
| !! | AAGCAAAGGCATCATAATAT+TGG | - | chr8_2:11294287-11294306 | None:intergenic | 30.0% |
| !! | TGTCTAGATAGAAGTACTAA+AGG | + | chr8_2:11294431-11294450 | Msa1234120:intron | 30.0% |
| !! | TCACATTTTCTATGGGTTAA+TGG | - | chr8_2:11294459-11294478 | None:intergenic | 30.0% |
| !!! | TCTTGACATCTAGCTTTTAA+GGG | - | chr8_2:11294509-11294528 | None:intergenic | 30.0% |
| GTGTTTGGATGATTATCAAT+TGG | - | chr8_2:11294732-11294751 | None:intergenic | 30.0% | |
| !!! | CCCTGATATTTAGCTTTTAA+TGG | - | chr8_2:11294767-11294786 | None:intergenic | 30.0% |
| TTAAAAGCTAAATATCAGGG+GGG | + | chr8_2:11294767-11294786 | Msa1234120:intron | 30.0% | |
| GCATTTCATACTACTTAATG+GGG | + | chr8_2:11294822-11294841 | Msa1234120:intron | 30.0% | |
| CATTTCATACTACTTAATGG+GGG | + | chr8_2:11294823-11294842 | Msa1234120:intron | 30.0% | |
| CTATAATTATGAGCTCATAC+TGG | - | chr8_2:11294993-11295012 | None:intergenic | 30.0% | |
| !!! | TTTCAGAATTTTGGCTTTGA+TGG | + | chr8_2:11295289-11295308 | Msa1234120:intron | 30.0% |
| !!! | ATTCACATTTTGGAATTAGC+AGG | - | chr8_2:11295388-11295407 | None:intergenic | 30.0% |
| TGAACTTAAAGATTCTTGCA+AGG | + | chr8_2:11295494-11295513 | Msa1234120:three_prime_UTR | 30.0% | |
| TAAAGACACTCCTAAAATGA+AGG | - | chr8_2:11295575-11295594 | None:intergenic | 30.0% | |
| GTCAATTTAGTTATGGATGA+TGG | + | chr8_2:11295654-11295673 | Msa1234120:three_prime_UTR | 30.0% | |
| ! | AATTTAGTTATGGATGATGG+TGG | + | chr8_2:11295657-11295676 | Msa1234120:three_prime_UTR | 30.0% |
| ATTTAAGCTCAAAGTGAGTA+GGG | - | chr8_2:11295768-11295787 | None:intergenic | 30.0% | |
| TATTTAAGCTCAAAGTGAGT+AGG | - | chr8_2:11295769-11295788 | None:intergenic | 30.0% | |
| CAAAAATCTGGAAAAGAGGA+AGG | + | chr8_2:11291519-11291538 | Msa1234120:five_prime_UTR | 35.0% | |
| ! | TCAGATCTGAAGTTTGAGAA+AGG | + | chr8_2:11291640-11291659 | Msa1234120:five_prime_UTR | 35.0% |
| ! | ATCTGAAGTTTGAGAAAGGA+AGG | + | chr8_2:11291644-11291663 | Msa1234120:five_prime_UTR | 35.0% |
| TAACCTTTACGAACAGAAGT+TGG | - | chr8_2:11291797-11291816 | None:intergenic | 35.0% | |
| ! | ACCCTTTTGATCATGTTTGT+TGG | + | chr8_2:11292041-11292060 | Msa1234120:intron | 35.0% |
| GGAATTGAAATTCAAGCTTC+TGG | + | chr8_2:11292081-11292100 | Msa1234120:intron | 35.0% | |
| !!! | CTGAACATTTTTTGTTACCC+GGG | + | chr8_2:11292232-11292251 | Msa1234120:intron | 35.0% |
| ! | ATGTGTGTCTGTGAGTTTTT+AGG | + | chr8_2:11292277-11292296 | Msa1234120:intron | 35.0% |
| !!! | TTTTTTGTCTGTAGACAGAG+TGG | - | chr8_2:11292312-11292331 | None:intergenic | 35.0% |
| TTGACAAGATTGGTAGAGTT+GGG | - | chr8_2:11292501-11292520 | None:intergenic | 35.0% | |
| GTATTGTCAAATAGCAGCTA+TGG | + | chr8_2:11292598-11292617 | Msa1234120:intron | 35.0% | |
| GTTTGGAAACTAATTTGGGT+GGG | - | chr8_2:11292774-11292793 | None:intergenic | 35.0% | |
| TGTTTGGAAACTAATTTGGG+TGG | - | chr8_2:11292775-11292794 | None:intergenic | 35.0% | |
| TCAATGTGGTTTAGGTGAAT+TGG | + | chr8_2:11292830-11292849 | Msa1234120:intron | 35.0% | |
| TGGTTTAGGTGAATTGGTAA+CGG | + | chr8_2:11292836-11292855 | Msa1234120:intron | 35.0% | |
| GTGAGAAGGTTGTAATTGAA+TGG | + | chr8_2:11292887-11292906 | Msa1234120:intron | 35.0% | |
| ! | GAATGGCATTGCAATTTGTT+AGG | + | chr8_2:11292904-11292923 | Msa1234120:intron | 35.0% |
| !! | ATGGCATTGCAATTTGTTAG+GGG | + | chr8_2:11292906-11292925 | Msa1234120:intron | 35.0% |
| CAAGAACTTACACCCATTAT+AGG | - | chr8_2:11293030-11293049 | None:intergenic | 35.0% | |
| !! | CTATAATGGGTGTAAGTTCT+TGG | + | chr8_2:11293028-11293047 | Msa1234120:intron | 35.0% |
| ! | GAGAGTGTAAGAAAAACTCT+AGG | + | chr8_2:11293073-11293092 | Msa1234120:intron | 35.0% |
| ! | AAAACTCTAGGCCAAACTTT+TGG | + | chr8_2:11293085-11293104 | Msa1234120:intron | 35.0% |
| ! | CTTTTCTTACTACGTAGAGT+TGG | - | chr8_2:11293154-11293173 | None:intergenic | 35.0% |
| GTATTTCATAGCTAACTGCA+CGG | + | chr8_2:11293181-11293200 | Msa1234120:intron | 35.0% | |
| AAAACTATACTCCACTAGGT+AGG | + | chr8_2:11293227-11293246 | Msa1234120:intron | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr8_2:11293753-11293772 | None:intergenic | 35.0% | |
| AATCAATGACCAGTTCATCA+GGG | - | chr8_2:11294023-11294042 | None:intergenic | 35.0% | |
| AAATCAATGACCAGTTCATC+AGG | - | chr8_2:11294024-11294043 | None:intergenic | 35.0% | |
| ! | ATGATGCATATTTCTGATCC+TGG | + | chr8_2:11294107-11294126 | Msa1234120:intron | 35.0% |
| !!! | TATTTCTGATCCTGGTTTTG+CGG | + | chr8_2:11294115-11294134 | Msa1234120:intron | 35.0% |
| !!! | TTATTTTTTGAGGTGGGGAT+TGG | + | chr8_2:11294351-11294370 | Msa1234120:intron | 35.0% |
| TGATAAGTATCCAAGCACTA+TGG | + | chr8_2:11294476-11294495 | Msa1234120:intron | 35.0% | |
| GATAAGTATCCAAGCACTAT+GGG | + | chr8_2:11294477-11294496 | Msa1234120:intron | 35.0% | |
| !!! | CTCTTGACATCTAGCTTTTA+AGG | - | chr8_2:11294510-11294529 | None:intergenic | 35.0% |
| ATCGAGTAGTATGAGATGTT+TGG | - | chr8_2:11294561-11294580 | None:intergenic | 35.0% | |
| GATAATCATCCAAACACTTG+AGG | + | chr8_2:11294735-11294754 | Msa1234120:intron | 35.0% | |
| TAAAAGCTAAATATCAGGGG+GGG | + | chr8_2:11294768-11294787 | Msa1234120:intron | 35.0% | |
| AAGTAGTATGAAATGCTTGG+TGG | - | chr8_2:11294818-11294837 | None:intergenic | 35.0% | |
| !! | TTATAGGGAACTTGGTGTAA+CGG | - | chr8_2:11294860-11294879 | None:intergenic | 35.0% |
| !!! | TTTTGGCTTTGATGGAAAAC+TGG | + | chr8_2:11295297-11295316 | Msa1234120:CDS | 35.0% |
| AGATTCTTGCAAGGTAGAAA+TGG | + | chr8_2:11295503-11295522 | Msa1234120:three_prime_UTR | 35.0% | |
| !! | TTAGGAGTGTCTTTACATGT+TGG | + | chr8_2:11295580-11295599 | Msa1234120:three_prime_UTR | 35.0% |
| ! | CTGTGTGATGATGATGAAGA+AGG | - | chr8_2:11291608-11291627 | None:intergenic | 40.0% |
| AACGTGAAGGTTGAGAAAAC+AGG | + | chr8_2:11291675-11291694 | Msa1234120:five_prime_UTR | 40.0% | |
| TCAGTGTTCGTTCTTCTTCA+TGG | + | chr8_2:11291757-11291776 | Msa1234120:exon | 40.0% | |
| TCTCCAACTTCTGTTCGTAA+AGG | + | chr8_2:11291791-11291810 | Msa1234120:CDS | 40.0% | |
| !! | TTTGAGAATAGGAGCATCAC+CGG | - | chr8_2:11291934-11291953 | None:intergenic | 40.0% |
| TTCAGTTGAGCTAGGTCTTA+CGG | - | chr8_2:11292217-11292236 | None:intergenic | 40.0% | |
| AAACTCACAGACACACATAG+TGG | - | chr8_2:11292275-11292294 | None:intergenic | 40.0% | |
| TAGCATGTTTGGTCTCAAAG+TGG | + | chr8_2:11292453-11292472 | Msa1234120:intron | 40.0% | |
| GTTGACAAGATTGGTAGAGT+TGG | - | chr8_2:11292502-11292521 | None:intergenic | 40.0% | |
| CTACCAATCTTGTCAACTAG+CGG | + | chr8_2:11292505-11292524 | Msa1234120:intron | 40.0% | |
| AAATAGCAGCTATGGTGTAG+TGG | + | chr8_2:11292606-11292625 | Msa1234120:intron | 40.0% | |
| ! | GCGGAAAATAGCAGTTTGTT+AGG | - | chr8_2:11292635-11292654 | None:intergenic | 40.0% |
| ACCTACTAGAGTTCAACGTA+CGG | - | chr8_2:11292661-11292680 | None:intergenic | 40.0% | |
| ! | GGTTTAGGTGAATTGGTAAC+GGG | + | chr8_2:11292837-11292856 | Msa1234120:intron | 40.0% |
| !! | GTTTAGGTGAATTGGTAACG+GGG | + | chr8_2:11292838-11292857 | Msa1234120:intron | 40.0% |
| !! | TTTAGGTGAATTGGTAACGG+GGG | + | chr8_2:11292839-11292858 | Msa1234120:intron | 40.0% |
| !! | TGAGTTCTAGAGTCTGTCAA+TGG | + | chr8_2:11292945-11292964 | Msa1234120:intron | 40.0% |
| TATACTCCACTAGGTAGGAT+TGG | + | chr8_2:11293232-11293251 | Msa1234120:intron | 40.0% | |
| CTACTTACTCGAGTCAATAG+CGG | + | chr8_2:11293258-11293277 | Msa1234120:intron | 40.0% | |
| TGAAATGCGGTATAGGTTAC+AGG | - | chr8_2:11293362-11293381 | None:intergenic | 40.0% | |
| ! | GAGACTCAATCAATTTTCGC+AGG | - | chr8_2:11293530-11293549 | None:intergenic | 40.0% |
| TGGAAATTCCGCCTTAATTG+CGG | + | chr8_2:11293581-11293600 | Msa1234120:intron | 40.0% | |
| !! | CTTCATTGTGTTGGCTTTGA+GGG | + | chr8_2:11293649-11293668 | Msa1234120:intron | 40.0% |
| !! | TTCATTGTGTTGGCTTTGAG+GGG | + | chr8_2:11293650-11293669 | Msa1234120:intron | 40.0% |
| GAGTGTTATCTATTCGACGT+GGG | - | chr8_2:11293687-11293706 | None:intergenic | 40.0% | |
| ! | AGAGTGTTATCTATTCGACG+TGG | - | chr8_2:11293688-11293707 | None:intergenic | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr8_2:11293751-11293770 | Msa1234120:intron | 40.0% |
| TATTTGACATGGCAGATAGC+TGG | + | chr8_2:11293822-11293841 | Msa1234120:intron | 40.0% | |
| GCGAAGAAAGTCTATCACTT+TGG | - | chr8_2:11293862-11293881 | None:intergenic | 40.0% | |
| ! | AGCCTTTAAAGAACCAGATG+GGG | - | chr8_2:11293933-11293952 | None:intergenic | 40.0% |
| ! | GAGCCTTTAAAGAACCAGAT+GGG | - | chr8_2:11293934-11293953 | None:intergenic | 40.0% |
| ! | AGAGCCTTTAAAGAACCAGA+TGG | - | chr8_2:11293935-11293954 | None:intergenic | 40.0% |
| !!! | GACATCTAGCTTTTAAGGGA+GGG | - | chr8_2:11294505-11294524 | None:intergenic | 40.0% |
| !!! | TGACATCTAGCTTTTAAGGG+AGG | - | chr8_2:11294506-11294525 | None:intergenic | 40.0% |
| ! | TGTTTGGTGGAGTGTATAAG+TGG | - | chr8_2:11294545-11294564 | None:intergenic | 40.0% |
| GAGTAGTATGAGATGTTTGG+TGG | - | chr8_2:11294558-11294577 | None:intergenic | 40.0% | |
| TGGATAGGATTACCTGTAGA+GGG | - | chr8_2:11294685-11294704 | None:intergenic | 40.0% | |
| TTGGATAGGATTACCTGTAG+AGG | - | chr8_2:11294686-11294705 | None:intergenic | 40.0% | |
| AAAAGCTAAATATCAGGGGG+GGG | + | chr8_2:11294769-11294788 | Msa1234120:intron | 40.0% | |
| ATACTACTTAATGGGGGACT+TGG | + | chr8_2:11294829-11294848 | Msa1234120:intron | 40.0% | |
| !! | TATAGGGAACTTGGTGTAAC+GGG | - | chr8_2:11294859-11294878 | None:intergenic | 40.0% |
| ! | GAGCATTGTTATAGGGAACT+TGG | - | chr8_2:11294868-11294887 | None:intergenic | 40.0% |
| !! | TCTGCTGGAGCATTGTTATA+GGG | - | chr8_2:11294875-11294894 | None:intergenic | 40.0% |
| !! | ATCTGCTGGAGCATTGTTAT+AGG | - | chr8_2:11294876-11294895 | None:intergenic | 40.0% |
| ACAGTAGTAGAACTGAACCA+CGG | + | chr8_2:11295047-11295066 | Msa1234120:intron | 40.0% | |
| GGATAGATAAAAAGCAACCG+TGG | - | chr8_2:11295067-11295086 | None:intergenic | 40.0% | |
| TCATGCTTGATGAGGGAAAT+TGG | - | chr8_2:11295088-11295107 | None:intergenic | 40.0% | |
| ! | GCAGTTTTCATGCTTGATGA+GGG | - | chr8_2:11295095-11295114 | None:intergenic | 40.0% |
| ! | AGCAGTTTTCATGCTTGATG+AGG | - | chr8_2:11295096-11295115 | None:intergenic | 40.0% |
| TCATCAAGCATGAAAACTGC+TGG | + | chr8_2:11295095-11295114 | Msa1234120:intron | 40.0% | |
| AGGGATAAAATATGGGCATC+AGG | - | chr8_2:11295157-11295176 | None:intergenic | 40.0% | |
| TGTCAACTACGCTTGTTCTA+TGG | + | chr8_2:11295321-11295340 | Msa1234120:CDS | 40.0% | |
| GGTTGAGAAAACAGGTCTGA+AGG | + | chr8_2:11291683-11291702 | Msa1234120:intron | 45.0% | |
| GTTGTTCATCTTAGAGCCAC+CGG | + | chr8_2:11291912-11291931 | Msa1234120:CDS | 45.0% | |
| ! | AGAGTTCAACGTACGGATTG+CGG | - | chr8_2:11292654-11292673 | None:intergenic | 45.0% |
| TCCGTACGTTGAACTCTAGT+AGG | + | chr8_2:11292657-11292676 | Msa1234120:intron | 45.0% | |
| GAGTTACCACCGCAGAAATT+AGG | + | chr8_2:11292700-11292719 | Msa1234120:intron | 45.0% | |
| GGAAATCCTAATTTCTGCGG+TGG | - | chr8_2:11292709-11292728 | None:intergenic | 45.0% | |
| AATGCGAACCGCAATTAAGG+CGG | - | chr8_2:11293592-11293611 | None:intergenic | 45.0% | |
| CTGCAATGAAGGCTAACCAA+AGG | - | chr8_2:11293619-11293638 | None:intergenic | 45.0% | |
| !! | CAACACAATGAAGGTGTTGG+AGG | - | chr8_2:11293642-11293661 | None:intergenic | 45.0% |
| CTCCAACACCTTCATTGTGT+TGG | + | chr8_2:11293640-11293659 | Msa1234120:intron | 45.0% | |
| ! | AGCCAACACAATGAAGGTGT+TGG | - | chr8_2:11293645-11293664 | None:intergenic | 45.0% |
| CCTCAAAGCCAACACAATGA+AGG | - | chr8_2:11293651-11293670 | None:intergenic | 45.0% | |
| !! | CCTTCATTGTGTTGGCTTTG+AGG | + | chr8_2:11293648-11293667 | Msa1234120:intron | 45.0% |
| !! | TCATTGTGTTGGCTTTGAGG+GGG | + | chr8_2:11293651-11293670 | Msa1234120:intron | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr8_2:11293744-11293763 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr8_2:11293741-11293760 | Msa1234120:intron | 45.0% |
| TGTTTACCAATGACTCCCTG+TGG | - | chr8_2:11293893-11293912 | None:intergenic | 45.0% | |
| CTATTTACTCTACCCCCATC+TGG | + | chr8_2:11293917-11293936 | Msa1234120:intron | 45.0% | |
| !! | ACCCCCATCTGGTTCTTTAA+AGG | + | chr8_2:11293928-11293947 | Msa1234120:intron | 45.0% |
| ! | GCCTTTAAAGAACCAGATGG+GGG | - | chr8_2:11293932-11293951 | None:intergenic | 45.0% |
| ATGACCAGTTCATCAGGGTT+CGG | - | chr8_2:11294018-11294037 | None:intergenic | 45.0% | |
| ! | TGTAGGTGTAGGCCTTTTTG+TGG | + | chr8_2:11294207-11294226 | Msa1234120:intron | 45.0% |
| ! | TGGGGATTGGTAGAGTAGTA+TGG | + | chr8_2:11294364-11294383 | Msa1234120:intron | 45.0% |
| ATACTACTCGATGCGAGACT+TGG | + | chr8_2:11294569-11294588 | Msa1234120:intron | 45.0% | |
| TACTACTCGATGCGAGACTT+GGG | + | chr8_2:11294570-11294589 | Msa1234120:intron | 45.0% | |
| TGGTTGCTGATAGCTTGGAT+AGG | - | chr8_2:11294700-11294719 | None:intergenic | 45.0% | |
| ! | ATTGCTGGTTGCTGATAGCT+TGG | - | chr8_2:11294705-11294724 | None:intergenic | 45.0% |
| ! | GGTGGAGTATTTAAGTGCCT+TGG | - | chr8_2:11294800-11294819 | None:intergenic | 45.0% |
| !! | ATAGGGAACTTGGTGTAACG+GGG | - | chr8_2:11294858-11294877 | None:intergenic | 45.0% |
| GCATCAGGCTTGTCACATAT+GGG | - | chr8_2:11295142-11295161 | None:intergenic | 45.0% | |
| ACTACGCTTGTTCTATGGCA+TGG | + | chr8_2:11295326-11295345 | Msa1234120:CDS | 45.0% | |
| CTACGCTTGTTCTATGGCAT+GGG | + | chr8_2:11295327-11295346 | Msa1234120:CDS | 45.0% | |
| TACGCTTGTTCTATGGCATG+GGG | + | chr8_2:11295328-11295347 | Msa1234120:CDS | 45.0% | |
| TGAGTTTGTGCTGAAACGTG+TGG | - | chr8_2:11295436-11295455 | None:intergenic | 45.0% | |
| GAAGGAGAGAACGAACGTGA+AGG | + | chr8_2:11291662-11291681 | Msa1234120:five_prime_UTR | 50.0% | |
| GAGCTAGGTCTTACGGACAA+TGG | - | chr8_2:11292210-11292229 | None:intergenic | 50.0% | |
| !!! | TGTTACCCGGGTTTTGAACC+CGG | + | chr8_2:11292244-11292263 | Msa1234120:intron | 50.0% |
| ! | ACACACATAGTGGAGATCCC+GGG | - | chr8_2:11292265-11292284 | None:intergenic | 50.0% |
| ! | GACACACATAGTGGAGATCC+CGG | - | chr8_2:11292266-11292285 | None:intergenic | 50.0% |
| GGTAGAGTTGGGCTAATGCT+TGG | - | chr8_2:11292490-11292509 | None:intergenic | 50.0% | |
| ! | GTGCCGCTAGTTGACAAGAT+TGG | - | chr8_2:11292511-11292530 | None:intergenic | 50.0% |
| ACTCCACTAGGTAGGATTGG+TGG | + | chr8_2:11293235-11293254 | Msa1234120:intron | 50.0% | |
| TAGCCACCAATCCTACCTAG+TGG | - | chr8_2:11293241-11293260 | None:intergenic | 50.0% | |
| CGCAATGCGAACCGCAATTA+AGG | - | chr8_2:11293595-11293614 | None:intergenic | 50.0% | |
| GAACTCCTCACCTTACAAGC+CGG | + | chr8_2:11293731-11293750 | Msa1234120:intron | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr8_2:11293739-11293758 | None:intergenic | 50.0% |
| TTCACCGAACCCTGATGAAC+TGG | + | chr8_2:11294011-11294030 | Msa1234120:CDS | 50.0% | |
| GGTGGAGTGTATAAGTGGCT+TGG | - | chr8_2:11294540-11294559 | None:intergenic | 50.0% | |
| GCTCTTGAGAACTGACATCC+CGG | + | chr8_2:11294626-11294645 | Msa1234120:intron | 50.0% | |
| TACCTATCTCAGCCCTCTAC+AGG | + | chr8_2:11294670-11294689 | Msa1234120:intron | 50.0% | |
| TACCTGTAGAGGGCTGAGAT+AGG | - | chr8_2:11294675-11294694 | None:intergenic | 50.0% | |
| TGGAGGGTTCCTCAAGTGTT+TGG | - | chr8_2:11294747-11294766 | None:intergenic | 50.0% | |
| CAGGCTTGTCACATATGGGA+TGG | - | chr8_2:11295138-11295157 | None:intergenic | 50.0% | |
| GGCATCAGGCTTGTCACATA+TGG | - | chr8_2:11295143-11295162 | None:intergenic | 50.0% | |
| !! | GAGAATAGGAGCATCACCGG+TGG | - | chr8_2:11291931-11291950 | None:intergenic | 55.0% |
| !!! | GTTACCCGGGTTTTGAACCC+GGG | + | chr8_2:11292245-11292264 | Msa1234120:intron | 55.0% |
| AGATCCCGGGTTCAAAACCC+GGG | - | chr8_2:11292252-11292271 | None:intergenic | 55.0% | |
| GAGATCCCGGGTTCAAAACC+CGG | - | chr8_2:11292253-11292272 | None:intergenic | 55.0% | |
| ! | GGTGTTGGAGGCTGCAATGA+AGG | - | chr8_2:11293630-11293649 | None:intergenic | 55.0% |
| !! | TTGTGTTGGCTTTGAGGGGG+TGG | + | chr8_2:11293654-11293673 | Msa1234120:intron | 55.0% |
| TTCTTCGCAGACAGCTCCAC+AGG | + | chr8_2:11293874-11293893 | Msa1234120:CDS | 55.0% | |
| TCTTCGCAGACAGCTCCACA+GGG | + | chr8_2:11293875-11293894 | Msa1234120:CDS | 55.0% | |
| ACAGCTCCACAGGGAGTCAT+TGG | + | chr8_2:11293884-11293903 | Msa1234120:CDS | 55.0% | |
| CTTGAGAACTGACATCCCGG+TGG | + | chr8_2:11294629-11294648 | Msa1234120:intron | 55.0% | |
| ATCAGGGGGGGGAATAACCA+AGG | + | chr8_2:11294780-11294799 | Msa1234120:intron | 55.0% | |
| GCGGTTCGCATTGCGACCTT+TGG | + | chr8_2:11293600-11293619 | Msa1234120:intron | 60.0% | |
| GGGAGGGTTCCCATAGTGCT+TGG | - | chr8_2:11294489-11294508 | None:intergenic | 60.0% | |
| ATCCCGGTGGCTGCACACTA+CGG | + | chr8_2:11294642-11294661 | Msa1234120:intron | 60.0% | |
| CGCCGTAGTGTGCAGCCACC+GGG | - | chr8_2:11294647-11294666 | None:intergenic | 70.0% | |
| GCGCCGTAGTGTGCAGCCAC+CGG | - | chr8_2:11294648-11294667 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 11291513 | 11295847 | 11291513 | ID=Msa1234120;Name=Msa1234120 |
| chr8_2 | mRNA | 11291513 | 11295847 | 11291513 | ID=Msa1234120-mRNA-1;Parent=Msa1234120;Name=Msa1234120-mRNA-1;_AED=0.07;_eAED=0.07;_QI=182|1|1|1|0.66|0.57|7|493|95 |
| chr8_2 | exon | 11291513 | 11291582 | 11291513 | ID=Msa1234120-mRNA-1:exon:4396;Parent=Msa1234120-mRNA-1 |
| chr8_2 | exon | 11291615 | 11291696 | 11291615 | ID=Msa1234120-mRNA-1:exon:4397;Parent=Msa1234120-mRNA-1 |
| chr8_2 | exon | 11291746 | 11291812 | 11291746 | ID=Msa1234120-mRNA-1:exon:4398;Parent=Msa1234120-mRNA-1 |
| chr8_2 | exon | 11291910 | 11291968 | 11291910 | ID=Msa1234120-mRNA-1:exon:4399;Parent=Msa1234120-mRNA-1 |
| chr8_2 | exon | 11293837 | 11293905 | 11293837 | ID=Msa1234120-mRNA-1:exon:4400;Parent=Msa1234120-mRNA-1 |
| chr8_2 | exon | 11293988 | 11294050 | 11293988 | ID=Msa1234120-mRNA-1:exon:4401;Parent=Msa1234120-mRNA-1 |
| chr8_2 | exon | 11295295 | 11295847 | 11295295 | ID=Msa1234120-mRNA-1:exon:4402;Parent=Msa1234120-mRNA-1 |
| chr8_2 | five_prime_UTR | 11291513 | 11291582 | 11291513 | ID=Msa1234120-mRNA-1:five_prime_utr;Parent=Msa1234120-mRNA-1 |
| chr8_2 | five_prime_UTR | 11291615 | 11291696 | 11291615 | ID=Msa1234120-mRNA-1:five_prime_utr;Parent=Msa1234120-mRNA-1 |
| chr8_2 | five_prime_UTR | 11291746 | 11291775 | 11291746 | ID=Msa1234120-mRNA-1:five_prime_utr;Parent=Msa1234120-mRNA-1 |
| chr8_2 | CDS | 11291776 | 11291812 | 11291776 | ID=Msa1234120-mRNA-1:cds;Parent=Msa1234120-mRNA-1 |
| chr8_2 | CDS | 11291910 | 11291968 | 11291910 | ID=Msa1234120-mRNA-1:cds;Parent=Msa1234120-mRNA-1 |
| chr8_2 | CDS | 11293837 | 11293905 | 11293837 | ID=Msa1234120-mRNA-1:cds;Parent=Msa1234120-mRNA-1 |
| chr8_2 | CDS | 11293988 | 11294050 | 11293988 | ID=Msa1234120-mRNA-1:cds;Parent=Msa1234120-mRNA-1 |
| chr8_2 | CDS | 11295295 | 11295354 | 11295295 | ID=Msa1234120-mRNA-1:cds;Parent=Msa1234120-mRNA-1 |
| chr8_2 | three_prime_UTR | 11295355 | 11295847 | 11295355 | ID=Msa1234120-mRNA-1:three_prime_utr;Parent=Msa1234120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
