AlfalfaGEDB | Msa0580440

M. sativa cultivar zhongmu-4 / Msa0580440

KEGG: -
GO: GO:0000003 GO:0000226 GO:0003006 GO:0003674 GO:0005215 GO:0005319 GO:0005548 GO:0005575 GO:0005622 GO:0005623 GO:0005628 GO:0005634 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0008150 GO:0008525 GO:0008526 GO:0009653 GO:0009987 GO:0010876 GO:0010927 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016192 GO:0019953 GO:0022402 GO:0022413 GO:0022414 GO:0022607 GO:0030154 GO:0030427 GO:0030435 GO:0030437 GO:0031321 GO:0031322 GO:0032153 GO:0032502 GO:0032505 GO:0032989 GO:0033036 GO:0034293 GO:0035838 GO:0042763 GO:0042764 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043934 GO:0043935 GO:0044085 GO:0044424 GO:0044464 GO:0044703 GO:0048193 GO:0048468 GO:0048646 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0051286 GO:0051321 GO:0051704 GO:0060187 GO:0061024 GO:0071702 GO:0071840 GO:0120009 GO:0120010 GO:1903046
PFAM: PF00650.23

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0580440	XP_024639507.1	97.773	449	10	0	1	449	1	449	0.0	915

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0580440	sp\|F4JYJ3\|SFH11_ARATH	53.039	362	149	4	87	448	22	362	1.97e-138	405

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0580440	G7JW23	97.550	449	10	1	1	449	1	448	0.0	908

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0007970	Msa0580440	0.804255	2.358841e-49	-8.615850e-47
Msa0081520	Msa0580440	0.820979	5.151230e-53	-8.615850e-47
Msa0173890	Msa0580440	0.812315	4.510918e-51	-8.615850e-47
Msa0206840	Msa0580440	0.842306	2.802706e-58	-8.615850e-47
Msa0378720	Msa0580440	0.805829	1.105085e-49	-8.615850e-47
Msa0388770	Msa0580440	0.847507	1.107197e-59	-8.615850e-47
Msa0462070	Msa0580440	0.837129	6.237287e-57	-8.615850e-47
Msa0475790	Msa0580440	0.809263	2.062780e-50	-8.615850e-47
Msa0249540	Msa0580440	0.829277	5.633876e-55	-8.615850e-47
Msa0265850	Msa0580440	0.808021	3.800026e-50	-8.615850e-47
Msa0300320	Msa0580440	0.804739	1.869456e-49	-8.615850e-47
Msa0326590	Msa0580440	0.808773	2.626252e-50	-8.615850e-47
Msa0361080	Msa0580440	0.804900	1.730435e-49	-8.615850e-47
Msa0488790	Msa0580440	0.838283	3.152240e-57	-8.615850e-47
Msa0573380	Msa0580440	0.811661	6.261012e-51	-8.615850e-47
Msa0580440	Msa0699840	0.816128	6.485933e-52	-8.615850e-47
Msa0580440	Msa0742740	0.836014	1.199229e-56	-8.615850e-47
Msa0580440	Msa0782760	0.832053	1.177002e-55	-8.615850e-47
Msa0580440	Msa0796160	0.900513	6.793622e-78	-8.615850e-47
Msa0580440	Msa0820390	0.824910	6.246438e-54	-8.615850e-47
Msa0580440	Msa0823820	0.830925	2.231097e-55	-8.615850e-47
Msa0580440	Msa0833760	0.891573	3.511841e-74	-8.615850e-47
Msa0580440	Msa0863010	0.818588	1.812601e-52	-8.615850e-47
Msa0580440	Msa0996680	0.804065	2.583359e-49	-8.615850e-47
Msa0580440	Msa1020630	0.850895	1.263386e-60	-8.615850e-47
Msa0580440	Msa1031930	0.832697	8.152044e-56	-8.615850e-47
Msa0580440	Msa1071770	0.817456	3.267038e-52	-8.615850e-47
Msa0580440	Msa1113800	0.838426	2.896607e-57	-8.615850e-47
Msa0580440	Msa1132700	0.896255	4.396924e-76	-8.615850e-47
Msa0580440	Msa1150820	0.811720	6.079496e-51	-8.615850e-47
Msa0580440	Msa1158830	0.811188	7.932785e-51	-8.615850e-47
Msa0580440	Msa1160500	0.854053	1.589841e-61	-8.615850e-47
Msa0580440	Msa1181190	0.814041	1.885358e-51	-8.615850e-47
Msa0580440	Msa1184330	0.857188	1.935146e-62	-8.615850e-47
Msa0580440	Msa1227940	0.849861	2.463625e-60	-8.615850e-47
Msa0580440	Msa1271040	0.805283	1.438613e-49	-8.615850e-47
Msa0580440	Msa1341890	0.800203	1.608997e-48	-8.615850e-47
Msa0580440	Msa1356830	0.815125	1.084889e-51	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0580440	MtrunA17_Chr5g0399151	97.550	449	10	1	1	449	1	448	0.0	908
Msa0580440	MtrunA17_Chr4g0035391	54.870	308	132	2	53	356	44	348	3.04e-116	353
Msa0580440	MtrunA17_Chr5g0404711	53.795	303	138	1	54	354	13	315	6.97e-116	348
Msa0580440	MtrunA17_Chr3g0144911	49.847	327	159	2	54	375	44	370	1.36e-112	338
Msa0580440	MtrunA17_Chr1g0155521	55.986	284	123	1	73	356	72	353	4.05e-111	340
Msa0580440	MtrunA17_Chr3g0141821	57.308	260	111	0	93	352	71	330	1.61e-110	337
Msa0580440	MtrunA17_Chr8g0372651	55.435	276	123	0	81	356	45	320	6.13e-109	333
Msa0580440	MtrunA17_Chr3g0144891	51.495	301	144	1	56	354	36	336	6.93e-103	317
Msa0580440	MtrunA17_Chr7g0236461	50.542	277	137	0	81	357	66	342	8.39e-99	308
Msa0580440	MtrunA17_Chr4g0035361	47.561	328	161	4	116	440	2	321	3.09e-95	295
Msa0580440	MtrunA17_Chr3g0080051	43.642	346	174	4	12	356	19	344	2.64e-92	291
Msa0580440	MtrunA17_Chr4g0035381	45.205	292	156	2	92	379	61	352	3.32e-87	271
Msa0580440	MtrunA17_Chr8g0369291	49.819	277	135	2	81	356	59	332	4.43e-86	275
Msa0580440	MtrunA17_Chr3g0102691	29.482	251	154	6	75	322	5	235	1.32e-19	89.7
Msa0580440	MtrunA17_Chr2g0290661	28.571	210	142	3	115	322	38	241	3.81e-18	85.1
Msa0580440	MtrunA17_Chr4g0076441	29.493	217	143	4	110	322	26	236	6.48e-18	84.7
Msa0580440	MtrunA17_Chr3g0131581	29.515	227	127	5	109	327	63	264	9.87e-18	83.2
Msa0580440	MtrunA17_Chr8g0385691	31.111	225	122	6	109	325	43	242	4.34e-16	77.8
Msa0580440	MtrunA17_Chr8g0385681	31.169	231	114	8	109	325	46	245	6.07e-16	77.4
Msa0580440	MtrunA17_Chr3g0131071	28.384	229	139	8	116	333	250	464	7.74e-12	67.4
Msa0580440	MtrunA17_Chr1g0155071	28.837	215	127	7	116	325	46	239	1.76e-11	64.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0580440	AT5G47510.4	53.039	362	149	4	87	448	23	363	1.80e-139	405
Msa0580440	AT5G47510.1	53.039	362	149	4	87	448	22	362	2.00e-139	405
Msa0580440	AT5G47510.2	56.386	321	132	1	87	399	23	343	3.91e-137	397
Msa0580440	AT5G47510.3	52.599	327	134	4	122	448	1	306	8.60e-124	363
Msa0580440	AT4G36490.1	54.110	292	132	1	64	353	25	316	6.08e-115	348
Msa0580440	AT2G21540.3	54.362	298	130	2	91	385	71	365	1.27e-114	347
Msa0580440	AT2G21540.5	54.362	298	130	2	91	385	71	365	1.27e-114	347
Msa0580440	AT2G21540.6	57.353	272	113	1	91	362	71	339	1.15e-113	345
Msa0580440	AT2G21540.2	57.353	272	113	1	91	362	71	339	1.15e-113	345
Msa0580440	AT2G21540.1	57.353	272	113	1	91	362	71	339	1.15e-113	345
Msa0580440	AT2G21540.4	57.353	272	113	1	91	362	71	339	1.15e-113	345
Msa0580440	AT2G18180.2	50.625	320	147	3	62	372	26	343	1.81e-113	344
Msa0580440	AT2G18180.1	50.625	320	147	3	62	372	26	343	2.32e-113	344
Msa0580440	AT4G39180.1	50.804	311	148	2	54	362	33	340	1.16e-111	340
Msa0580440	AT4G39180.3	50.804	311	148	2	54	362	33	340	1.46e-111	340
Msa0580440	AT4G39180.2	50.804	311	148	2	54	362	33	340	1.46e-111	340
Msa0580440	AT1G75370.1	54.237	295	132	1	81	375	79	370	1.54e-110	339
Msa0580440	AT4G39170.1	54.779	272	123	0	81	352	74	345	9.20e-110	337
Msa0580440	AT1G19650.3	48.624	327	160	2	75	401	64	382	1.26e-109	331
Msa0580440	AT1G75370.2	54.237	295	132	1	81	375	79	370	1.38e-109	338
Msa0580440	AT4G39170.2	55.019	269	121	0	81	349	74	342	1.47e-108	334
Msa0580440	AT1G19650.1	48.624	327	160	2	75	401	64	382	5.49e-108	332
Msa0580440	AT4G34580.2	51.495	301	143	1	54	351	24	324	1.14e-107	330
Msa0580440	AT4G34580.1	51.495	301	143	1	54	351	24	324	1.14e-107	330
Msa0580440	AT2G21520.2	51.916	287	134	1	70	352	65	351	1.95e-107	332
Msa0580440	AT2G21520.3	51.916	287	134	1	70	352	65	351	1.95e-107	332
Msa0580440	AT2G21520.1	51.916	287	134	1	70	352	61	347	2.09e-107	331
Msa0580440	AT3G24840.1	46.667	345	176	2	48	384	33	377	2.15e-107	330
Msa0580440	AT3G24840.6	46.667	345	176	2	48	384	33	377	2.15e-107	330
Msa0580440	AT3G24840.4	46.667	345	176	2	48	384	33	377	2.15e-107	330
Msa0580440	AT3G24840.2	46.667	345	176	2	48	384	33	377	2.15e-107	330
Msa0580440	AT3G24840.7	49.045	314	157	1	48	358	33	346	2.65e-107	330
Msa0580440	AT3G24840.3	49.045	314	157	1	48	358	33	346	2.65e-107	330
Msa0580440	AT3G24840.5	49.045	314	157	1	48	358	33	346	2.65e-107	330
Msa0580440	AT2G16380.2	52.249	289	136	1	93	379	66	354	3.66e-106	325
Msa0580440	AT2G16380.1	52.249	289	136	1	93	379	66	354	3.66e-106	325
Msa0580440	AT2G18180.4	51.698	265	119	2	115	372	10	272	2.00e-99	306
Msa0580440	AT2G18180.3	51.698	265	119	2	115	372	10	272	4.34e-99	305
Msa0580440	AT5G56160.2	48.534	307	154	3	54	356	30	336	2.47e-98	303
Msa0580440	AT1G19650.2	49.828	291	138	2	111	401	28	310	2.73e-98	305
Msa0580440	AT5G56160.1	48.534	307	154	3	54	356	30	336	6.41e-98	305
Msa0580440	AT5G56160.3	48.534	307	154	3	54	356	30	336	6.41e-98	305
Msa0580440	AT2G18180.5	53.441	247	106	2	133	372	1	245	4.64e-95	294
Msa0580440	AT1G55690.3	47.869	305	153	3	54	352	36	340	2.13e-91	290
Msa0580440	AT1G55690.2	47.869	305	153	3	54	352	36	340	2.90e-91	289
Msa0580440	AT1G55690.4	47.869	305	153	3	54	352	36	340	2.90e-91	289
Msa0580440	AT1G55690.1	47.869	305	153	3	54	352	36	340	2.90e-91	289
Msa0580440	AT1G55690.5	47.869	305	153	3	54	352	36	340	2.90e-91	289
Msa0580440	AT2G16380.3	51.807	249	118	1	133	379	1	249	4.85e-89	278
Msa0580440	AT5G47730.4	28.512	242	158	6	90	322	6	241	6.16e-19	88.2
Msa0580440	AT5G47730.1	28.512	242	158	6	90	322	6	241	6.16e-19	88.2
Msa0580440	AT1G55840.1	28.571	238	150	5	89	322	20	241	3.83e-18	85.5
Msa0580440	AT1G55840.2	29.954	217	142	4	110	322	4	214	5.41e-18	84.7
Msa0580440	AT5G47730.2	30.208	192	126	4	133	322	1	186	7.52e-16	78.2
Msa0580440	AT5G47730.3	30.208	192	126	4	133	322	1	186	7.52e-16	78.2
Msa0580440	AT1G01630.1	29.386	228	122	8	109	325	46	245	2.15e-13	70.5
Msa0580440	AT1G75170.2	27.982	218	129	8	116	327	47	242	1.52e-11	65.5
Msa0580440	AT1G75170.1	27.982	218	129	8	116	327	47	242	1.52e-11	65.5

Find 91 sgRNAs with CRISPR-Local

Find 162 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATCAACACTAATTATGTATT+TGG	0.075644	4_1:+85519108	None:intergenic
ATTAGTGTTGATAATAATTT+TGG	0.089634	4_1:-85519097	Msa0580440:three_prime_UTR
ATACAAATTTATTGAGTATT+TGG	0.124347	4_1:+85522130	None:intergenic
TGAATCATTTCTAACAATTC+TGG	0.209519	4_1:+85520130	None:intergenic
TCTTATCCGCTCATGAAATT+TGG	0.226089	4_1:-85521913	Msa0580440:CDS
ATTTGGAAGGAGTAAAAGTT+TGG	0.279082	4_1:-85521896	Msa0580440:CDS
TTTATTATTAATGCTGGTTC+TGG	0.287893	4_1:-85520639	Msa0580440:CDS
TCAACAATTTGTTCATCATT+TGG	0.301735	4_1:+85521847	None:intergenic
GATCTTCCTACTACACAAAA+AGG	0.336401	4_1:-85521973	Msa0580440:CDS
CCTGTGTATATTGAGAGAAT+TGG	0.338897	4_1:-85521228	Msa0580440:CDS
ATAATTGAGAAACATATCTT+TGG	0.343213	4_1:+85521624	None:intergenic
ATGATTATCATACTCTTCTA+AGG	0.346356	4_1:-85521774	Msa0580440:intron
TGCATCATCTTCTGGTGTTA+AGG	0.348901	4_1:-85522040	Msa0580440:CDS
TCCATGAAGATGTACCTTGC+AGG	0.355379	4_1:+85520929	None:intergenic
CTGTCTTCGCCTTTCGCCGT+TGG	0.369283	4_1:+85522096	None:intergenic
TCAACACTAATTATGTATTT+GGG	0.369346	4_1:+85519109	None:intergenic
AGAAAAGATGCATCATCTTC+TGG	0.370086	4_1:-85522048	Msa0580440:CDS
AATAGGAGGATGAATTGATT+TGG	0.371367	4_1:+85522008	None:intergenic
TGTTTCTCAATTATCTGAAA+TGG	0.373010	4_1:-85521615	Msa0580440:CDS
GCATCATCTTCTGGTGTTAA+GGG	0.378251	4_1:-85522039	Msa0580440:CDS
ATTATGTTAGCTTTCTAGAA+TGG	0.382824	4_1:+85518990	None:intergenic
AGAATTGTTAGAAATGATTC+AGG	0.387877	4_1:-85520128	Msa0580440:intron
GTATGATAATCATTGTGTTT+AGG	0.394177	4_1:+85521784	None:intergenic
GCCTGCAAGGTACATCTTCA+TGG	0.400385	4_1:-85520930	Msa0580440:CDS
AAACTCTTTATTATTAATGC+TGG	0.402252	4_1:-85520645	Msa0580440:CDS
ATAATGATCTGTTACCGTTT+CGG	0.410038	4_1:+85519740	None:intergenic
AGCTTCCACCACAAGTATCT+TGG	0.410693	4_1:-85521076	Msa0580440:CDS
ATTTATTGAGTATTTGGATA+AGG	0.414304	4_1:+85522136	None:intergenic
AAGGAGTAAAAGTTTGGAAA+AGG	0.439103	4_1:-85521890	Msa0580440:CDS
TCCTCCTATTGAAACGCATT+GGG	0.444721	4_1:-85521995	Msa0580440:CDS
AGATCCCAATGCGTTTCAAT+AGG	0.448836	4_1:+85521991	None:intergenic
AGTTTGGAAAAGGTTCTAGA+AGG	0.449950	4_1:-85521880	Msa0580440:CDS
AATTGCACATGTTCTGAGTA+TGG	0.450333	4_1:-85520190	Msa0580440:CDS
AGATGATCTAAGTATGTGTT+TGG	0.450664	4_1:-85519640	Msa0580440:CDS
CGCGAAATGCTTTCACGTGA+GGG	0.453780	4_1:-85521817	Msa0580440:CDS
TCGAGTCGACATGATTCATA+AGG	0.459041	4_1:-85521581	Msa0580440:intron
TTATGTTAGCTTTCTAGAAT+GGG	0.460793	4_1:+85518991	None:intergenic
GATTGGCTTGAAGCTAGTCT+TGG	0.461154	4_1:-85519555	Msa0580440:CDS
ATAAGACAACAATGACTTGA+TGG	0.465943	4_1:+85521930	None:intergenic
ATCCTCCTATTGAAACGCAT+TGG	0.466005	4_1:-85521996	Msa0580440:CDS
TGAAAATTATAAGTTACATA+TGG	0.473694	4_1:+85519023	None:intergenic
ATGTTATTATTCTATCATAG+TGG	0.478240	4_1:-85519176	Msa0580440:three_prime_UTR
CTTCTGGTGTTAAGGGATTG+AGG	0.494321	4_1:-85522032	Msa0580440:CDS
CTTGATAAGCCTTTCTTGTG+TGG	0.496556	4_1:+85521173	None:intergenic
CTGTGTATATTGAGAGAATT+GGG	0.498675	4_1:-85521227	Msa0580440:CDS
TGTCATTGAGCTCACCATCT+TGG	0.505312	4_1:+85519396	None:intergenic
ACAAGTATCTTGGATGTCAA+TGG	0.505672	4_1:-85521066	Msa0580440:CDS
AAGTATGTGTTTGGCACTTG+AGG	0.508698	4_1:-85519631	Msa0580440:CDS
TTGCTACTGTGCGTTCACTT+AGG	0.508717	4_1:+85520583	None:intergenic
GGCAAATAACCACACAAGAA+AGG	0.513788	4_1:-85521182	Msa0580440:CDS
TCGCGAAATGCTTTCACGTG+AGG	0.516953	4_1:-85521818	Msa0580440:CDS
GAGACAACAAGGGCTAGAAC+AGG	0.521228	4_1:-85519609	Msa0580440:CDS
CTAGAACAGGCTTGTCATGT+AGG	0.524567	4_1:-85519596	Msa0580440:CDS
CTCCTTCCAAATTTCATGAG+CGG	0.525376	4_1:+85521907	None:intergenic
GTTCTGGCTTTAAGATGTTG+TGG	0.526574	4_1:-85520623	Msa0580440:CDS
TTAGCTGCTAATGAACATGC+AGG	0.545388	4_1:+85521108	None:intergenic
ATGAGTACTCCAACGGCGAA+AGG	0.545746	4_1:-85522105	Msa0580440:CDS
GGTTGCTTGATGAGTGATCA+AGG	0.549060	4_1:-85520166	Msa0580440:CDS
TACTATCCTCATGGATACCA+TGG	0.558498	4_1:-85521270	Msa0580440:CDS
TCCCAATGCGTTTCAATAGG+AGG	0.565630	4_1:+85521994	None:intergenic
CATGCAGACAACGGAAGAGA+TGG	0.568473	4_1:-85519811	Msa0580440:intron
CTTTGACGTCAAGGTTTCTG+CGG	0.568605	4_1:-85521672	Msa0580440:intron
TTACATATGGTATCATGTTG+TGG	0.571513	4_1:+85519036	None:intergenic
ATCCGCTCATGAAATTTGGA+AGG	0.576650	4_1:-85521909	Msa0580440:CDS
AAATGATGAACAAATTGTTG+AGG	0.576847	4_1:-85521845	Msa0580440:CDS
AGGATCATTGATGTCCGAAA+CGG	0.582632	4_1:-85519754	Msa0580440:intron
TGATAATCATTGTGTTTAGG+TGG	0.583255	4_1:+85521787	None:intergenic
CACAACAATGTGGTTTCAGA+AGG	0.586412	4_1:-85519774	Msa0580440:CDS
AGAAAATCAACATTCGTTCG+TGG	0.592508	4_1:-85519073	Msa0580440:three_prime_UTR
CAATTATCTGAAATGGCGAA+AGG	0.593477	4_1:-85521608	Msa0580440:CDS
CTAATTTCTCAAAGCCTGCA+AGG	0.598822	4_1:-85520943	Msa0580440:CDS
TTACCTCAGTGTGTTGCTAG+AGG	0.609354	4_1:-85520408	Msa0580440:CDS
TGCCACATTTATCAACTCCA+TGG	0.612313	4_1:+85521253	None:intergenic
CCAATTCTCTCAATATACAC+AGG	0.625976	4_1:+85521228	None:intergenic
TGGCACTTGAGGAGACAACA+AGG	0.626058	4_1:-85519620	Msa0580440:CDS
TGCACTTCAAGACACCAAGA+TGG	0.631706	4_1:-85519410	Msa0580440:intron
TAGCTGCTAATGAACATGCA+GGG	0.636345	4_1:+85521109	None:intergenic
TGATGAGTGATCAAGGCCCA+TGG	0.641896	4_1:-85520159	Msa0580440:CDS
ATTGACATCCAAGATACTTG+TGG	0.642379	4_1:+85521068	None:intergenic
TGATAGATATTAACAAACTG+TGG	0.642658	4_1:-85521203	Msa0580440:CDS
TGATAGCAGTTATTATCCTG+AGG	0.642954	4_1:-85520894	Msa0580440:intron
CAGACAACGGAAGAGATGGA+TGG	0.654863	4_1:-85519807	Msa0580440:CDS
GACATCCAAGATACTTGTGG+TGG	0.658366	4_1:+85521071	None:intergenic
TGTATGAATGAGTACTCCAA+CGG	0.664945	4_1:-85522112	Msa0580440:exon
TACCATGGAGTTGATAAATG+TGG	0.686716	4_1:-85521255	Msa0580440:CDS
TGCTAGAGGATATTGATCCG+AGG	0.699774	4_1:-85520394	Msa0580440:intron
GGCACTTGAGGAGACAACAA+GGG	0.705217	4_1:-85519619	Msa0580440:CDS
TGCACATGTTCTGAGTATGG+AGG	0.721718	4_1:-85520187	Msa0580440:CDS
TCAACTCCATGGTATCCATG+AGG	0.729821	4_1:+85521264	None:intergenic
TATCCTCTAGCAACACACTG+AGG	0.753762	4_1:+85520405	None:intergenic
TGCGTGCGAACACAACAATG+TGG	0.799380	4_1:-85519784	Msa0580440:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AATAAGTTTTTAAAAAGTTA+TGG	+	chr4_1:85519732-85519751	None:intergenic	10.0%
!!	ATACAAATTTATTGAGTATT+TGG	+	chr4_1:85519065-85519084	None:intergenic	15.0%
!!!	ATATGAAATTTTTATTTGGT+TGG	-	chr4_1:85519676-85519695	Msa0580440:intron	15.0%
!!!	TAATCAATTAAATTTGTTCT+TGG	+	chr4_1:85521273-85521292	None:intergenic	15.0%
!!!	ATTAGTGTTGATAATAATTT+TGG	-	chr4_1:85522095-85522114	Msa0580440:CDS	15.0%
!!!	TTAGTGTTGATAATAATTTT+GGG	-	chr4_1:85522096-85522115	Msa0580440:CDS	15.0%
!!	TGAAAATTATAAGTTACATA+TGG	+	chr4_1:85522172-85522191	None:intergenic	15.0%
!!	ATTTATTGAGTATTTGGATA+AGG	+	chr4_1:85519059-85519078	None:intergenic	20.0%
!!	ATAATTGAGAAACATATCTT+TGG	+	chr4_1:85519571-85519590	None:intergenic	20.0%
!!	AACAAATTAAAACTCAACTA+TGG	+	chr4_1:85519833-85519852	None:intergenic	20.0%
!!!	TTTTGATGTCATTCATTTTT+TGG	-	chr4_1:85519852-85519871	Msa0580440:intron	20.0%
!!	GTGTTTCATAATTTACTATA+TGG	-	chr4_1:85520173-85520192	Msa0580440:CDS	20.0%
!!	AAACTCTTTATTATTAATGC+TGG	-	chr4_1:85520547-85520566	Msa0580440:intron	20.0%
!!	GTAACATATTCATCAAAAAA+AGG	+	chr4_1:85520884-85520903	None:intergenic	20.0%
!!	ATATGTTACTACTTACAATT+AGG	-	chr4_1:85520895-85520914	Msa0580440:CDS	20.0%
!!	TAGCATTACAAAAAATTGAT+TGG	-	chr4_1:85521620-85521639	Msa0580440:CDS	20.0%
!!	ATGTTATTATTCTATCATAG+TGG	-	chr4_1:85522016-85522035	Msa0580440:CDS	20.0%
!!	TCAACACTAATTATGTATTT+GGG	+	chr4_1:85522086-85522105	None:intergenic	20.0%
!!	ATCAACACTAATTATGTATT+TGG	+	chr4_1:85522087-85522106	None:intergenic	20.0%
!!!	TTTTCTGCTTATAGTTTTGA+AGG	-	chr4_1:85519029-85519048	Msa0580440:three_prime_UTR	25.0%
!!	TCAACAATTTGTTCATCATT+TGG	+	chr4_1:85519348-85519367	None:intergenic	25.0%
!	AAATGATGAACAAATTGTTG+AGG	-	chr4_1:85519347-85519366	Msa0580440:intron	25.0%
!	GTATGATAATCATTGTGTTT+AGG	+	chr4_1:85519411-85519430	None:intergenic	25.0%
!	ATGATTATCATACTCTTCTA+AGG	-	chr4_1:85519418-85519437	Msa0580440:CDS	25.0%
!!	TCTGTTCTAAATCATGTTTA+TGG	-	chr4_1:85519474-85519493	Msa0580440:intron	25.0%
!	TGTTTCTCAATTATCTGAAA+TGG	-	chr4_1:85519577-85519596	Msa0580440:CDS	25.0%
!!!	TCATTTTTTGGTACATAATC+AGG	-	chr4_1:85519864-85519883	Msa0580440:intron	25.0%
!	TGATAGATATTAACAAACTG+TGG	-	chr4_1:85519989-85520008	Msa0580440:intron	25.0%
!!!	AATTTTAATCGACTTCGATA+GGG	+	chr4_1:85520501-85520520	None:intergenic	25.0%
!!!	TTTATTATTAATGCTGGTTC+TGG	-	chr4_1:85520553-85520572	Msa0580440:intron	25.0%
!!!	ATACAAAAGTCATTTTACCT+CGG	+	chr4_1:85520818-85520837	None:intergenic	25.0%
!	AAATCTAAGAGTTTCATTGA+AGG	+	chr4_1:85520939-85520958	None:intergenic	25.0%
!	TGAATCATTTCTAACAATTC+TGG	+	chr4_1:85521065-85521084	None:intergenic	25.0%
!	AGAATTGTTAGAAATGATTC+AGG	-	chr4_1:85521064-85521083	Msa0580440:CDS	25.0%
!	TTTATTTGTCTTGTAGAAAC+AGG	-	chr4_1:85521145-85521164	Msa0580440:CDS	25.0%
!	TATAGTTGTCACGAAAAAAT+GGG	-	chr4_1:85521175-85521194	Msa0580440:CDS	25.0%
!	AAAATTATTCATGCAGACAA+CGG	-	chr4_1:85521372-85521391	Msa0580440:intron	25.0%
!	CATTTAACTATGTTTAAGCA+AGG	+	chr4_1:85521512-85521531	None:intergenic	25.0%
!	AATTTCTCTATGTTAAACCT+AGG	-	chr4_1:85521690-85521709	Msa0580440:intron	25.0%
!	ATTTCTCTATGTTAAACCTA+GGG	-	chr4_1:85521691-85521710	Msa0580440:intron	25.0%
!!!	TGTTTCTTTTTTTCTCTTTC+AGG	-	chr4_1:85521858-85521877	Msa0580440:CDS	25.0%
!!	AAAAAAGAGTTGATTATGTC+AGG	-	chr4_1:85522060-85522079	Msa0580440:CDS	25.0%
	AATAGGAGGATGAATTGATT+TGG	+	chr4_1:85519187-85519206	None:intergenic	30.0%
!	TTCTTTCCTTTTTGTGTAGT+AGG	+	chr4_1:85519228-85519247	None:intergenic	30.0%
	ATAAGACAACAATGACTTGA+TGG	+	chr4_1:85519265-85519284	None:intergenic	30.0%
	ATTTGGAAGGAGTAAAAGTT+TGG	-	chr4_1:85519296-85519315	Msa0580440:exon	30.0%
	AAGGAGTAAAAGTTTGGAAA+AGG	-	chr4_1:85519302-85519321	Msa0580440:CDS	30.0%
	TGATAATCATTGTGTTTAGG+TGG	+	chr4_1:85519408-85519427	None:intergenic	30.0%
	CTAAATCATGTTTATGGACT+TGG	-	chr4_1:85519480-85519499	Msa0580440:intron	30.0%
!	ATAAGGTGAATTGACTCAAA+AGG	-	chr4_1:85519628-85519647	Msa0580440:CDS	30.0%
	GTGAAAAAATACTATCCTCA+TGG	-	chr4_1:85519913-85519932	Msa0580440:intron	30.0%
	CTGTGTATATTGAGAGAATT+GGG	-	chr4_1:85519965-85519984	Msa0580440:intron	30.0%
	CATAACCAAATCAGCATTAT+TGG	+	chr4_1:85520200-85520219	None:intergenic	30.0%
!!	GAATTTTAATCGACTTCGAT+AGG	+	chr4_1:85520502-85520521	None:intergenic	30.0%
	CAGTAGCAAAAATTCAAGTA+TGG	-	chr4_1:85520623-85520642	Msa0580440:CDS	30.0%
	AGTTGCTACTGAAAAAATCA+CGG	+	chr4_1:85520848-85520867	None:intergenic	30.0%
!!	AGTAACTTGCCAACATTTTT+GGG	-	chr4_1:85520975-85520994	Msa0580440:intron	30.0%
!	ACAATTCTGGATTTTTCCAT+GGG	+	chr4_1:85521052-85521071	None:intergenic	30.0%
!	AACAATTCTGGATTTTTCCA+TGG	+	chr4_1:85521053-85521072	None:intergenic	30.0%
	AGGTTTGTCAATATCAAGAA+CGG	-	chr4_1:85521084-85521103	Msa0580440:CDS	30.0%
	CTATAGTTGTCACGAAAAAA+TGG	-	chr4_1:85521174-85521193	Msa0580440:CDS	30.0%
	TTATTCAACTACCATGCTTT+CGG	-	chr4_1:85521247-85521266	Msa0580440:CDS	30.0%
	ATAATGATCTGTTACCGTTT+CGG	+	chr4_1:85521455-85521474	None:intergenic	30.0%
	TACCTATGTCCTTATTATGT+AGG	-	chr4_1:85521483-85521502	Msa0580440:intron	30.0%
	ACCTATGTCCTTATTATGTA+GGG	-	chr4_1:85521484-85521503	Msa0580440:intron	30.0%
	GCTTAAACATAGTTAAATGC+AGG	-	chr4_1:85521513-85521532	Msa0580440:intron	30.0%
	AGATGATCTAAGTATGTGTT+TGG	-	chr4_1:85521552-85521571	Msa0580440:intron	30.0%
	TAGGGAATCCAATATGTTTA+GGG	-	chr4_1:85521709-85521728	Msa0580440:intron	30.0%
	GCAAATTACCCTAAACATAT+TGG	+	chr4_1:85521720-85521739	None:intergenic	30.0%
	TTACATATGGTATCATGTTG+TGG	+	chr4_1:85522159-85522178	None:intergenic	30.0%
	TGTATGAATGAGTACTCCAA+CGG	-	chr4_1:85519080-85519099	Msa0580440:three_prime_UTR	35.0%
	AGAAAAGATGCATCATCTTC+TGG	-	chr4_1:85519144-85519163	Msa0580440:three_prime_UTR	35.0%
	GATCTTCCTACTACACAAAA+AGG	-	chr4_1:85519219-85519238	Msa0580440:three_prime_UTR	35.0%
	TCTTATCCGCTCATGAAATT+TGG	-	chr4_1:85519279-85519298	Msa0580440:three_prime_UTR	35.0%
!!	AGTTTGGAAAAGGTTCTAGA+AGG	-	chr4_1:85519312-85519331	Msa0580440:CDS	35.0%
!	CAATTATCTGAAATGGCGAA+AGG	-	chr4_1:85519584-85519603	Msa0580440:CDS	35.0%
!!	TACCATGGAGTTGATAAATG+TGG	-	chr4_1:85519937-85519956	Msa0580440:intron	35.0%
	CCAATTCTCTCAATATACAC+AGG	+	chr4_1:85519967-85519986	None:intergenic	35.0%
	CCTGTGTATATTGAGAGAAT+TGG	-	chr4_1:85519964-85519983	Msa0580440:intron	35.0%
	ATTGACATCCAAGATACTTG+TGG	+	chr4_1:85520127-85520146	None:intergenic	35.0%
	ACAAGTATCTTGGATGTCAA+TGG	-	chr4_1:85520126-85520145	Msa0580440:intron	35.0%
!	ATGGTCCAATAATGCTGATT+TGG	-	chr4_1:85520192-85520211	Msa0580440:CDS	35.0%
!!	AATGCTGATTTGGTTATGTG+TGG	-	chr4_1:85520202-85520221	Msa0580440:CDS	35.0%
	TGTGGTTGTATTATTCTTCC+AGG	-	chr4_1:85520220-85520239	Msa0580440:intron	35.0%
	GTGGTTGTATTATTCTTCCA+GGG	-	chr4_1:85520221-85520240	Msa0580440:intron	35.0%
	TTGAGAAATTAGACATTCCC+TGG	+	chr4_1:85520241-85520260	None:intergenic	35.0%
	TGATAGCAGTTATTATCCTG+AGG	-	chr4_1:85520298-85520317	Msa0580440:intron	35.0%
!!	TGATCAACAAAAAGTACCTC+AGG	+	chr4_1:85520317-85520336	None:intergenic	35.0%
	TTTGTTGATCATAGCTCATG+CGG	-	chr4_1:85520326-85520345	Msa0580440:intron	35.0%
	ATCTTCAACATTCCTGTTTC+AGG	-	chr4_1:85520748-85520767	Msa0580440:intron	35.0%
!!!	AACATTCCTGTTTCAGGTTT+TGG	-	chr4_1:85520754-85520773	Msa0580440:intron	35.0%
!!!	ACATTCCTGTTTCAGGTTTT+GGG	-	chr4_1:85520755-85520774	Msa0580440:intron	35.0%
	GAAGGTAGAACATCACAAAA+AGG	+	chr4_1:85520921-85520940	None:intergenic	35.0%
!!	CAGTAACTTGCCAACATTTT+TGG	-	chr4_1:85520974-85520993	Msa0580440:intron	35.0%
	CAATTACCACCCAAAAATGT+TGG	+	chr4_1:85520987-85521006	None:intergenic	35.0%
!	AATTGCACATGTTCTGAGTA+TGG	-	chr4_1:85521002-85521021	Msa0580440:intron	35.0%
	GAAAAGCTACTTATCGTCAA+AGG	+	chr4_1:85521327-85521346	None:intergenic	35.0%
!	TTGACGATAAGTAGCTTTTC+TGG	-	chr4_1:85521327-85521346	Msa0580440:intron	35.0%
	TCTGGTAGAAATAACTGACA+AGG	-	chr4_1:85521345-85521364	Msa0580440:intron	35.0%
	TCCCTACATAATAAGGACAT+AGG	+	chr4_1:85521488-85521507	None:intergenic	35.0%
	CTAAACATATTGGATTCCCT+AGG	+	chr4_1:85521710-85521729	None:intergenic	35.0%
	CTAGGGAATCCAATATGTTT+AGG	-	chr4_1:85521708-85521727	Msa0580440:intron	35.0%
	AGAAAATCAACATTCGTTCG+TGG	-	chr4_1:85522119-85522138	Msa0580440:exon	35.0%
!	TGCATCATCTTCTGGTGTTA+AGG	-	chr4_1:85519152-85519171	Msa0580440:three_prime_UTR	40.0%
!	GCATCATCTTCTGGTGTTAA+GGG	-	chr4_1:85519153-85519172	Msa0580440:three_prime_UTR	40.0%
	ATCCTCCTATTGAAACGCAT+TGG	-	chr4_1:85519196-85519215	Msa0580440:three_prime_UTR	40.0%
	TCCTCCTATTGAAACGCATT+GGG	-	chr4_1:85519197-85519216	Msa0580440:three_prime_UTR	40.0%
	AGATCCCAATGCGTTTCAAT+AGG	+	chr4_1:85519204-85519223	None:intergenic	40.0%
	ATCCGCTCATGAAATTTGGA+AGG	-	chr4_1:85519283-85519302	Msa0580440:exon	40.0%
	CTCCTTCCAAATTTCATGAG+CGG	+	chr4_1:85519288-85519307	None:intergenic	40.0%
	TCGAGTCGACATGATTCATA+AGG	-	chr4_1:85519611-85519630	Msa0580440:CDS	40.0%
	TACTATCCTCATGGATACCA+TGG	-	chr4_1:85519922-85519941	Msa0580440:intron	40.0%
	TGCCACATTTATCAACTCCA+TGG	+	chr4_1:85519942-85519961	None:intergenic	40.0%
	GGCAAATAACCACACAAGAA+AGG	-	chr4_1:85520010-85520029	Msa0580440:intron	40.0%
	CTTGATAAGCCTTTCTTGTG+TGG	+	chr4_1:85520022-85520041	None:intergenic	40.0%
	TAGCTGCTAATGAACATGCA+GGG	+	chr4_1:85520086-85520105	None:intergenic	40.0%
	TTAGCTGCTAATGAACATGC+AGG	+	chr4_1:85520087-85520106	None:intergenic	40.0%
	CTAATTTCTCAAAGCCTGCA+AGG	-	chr4_1:85520249-85520268	Msa0580440:intron	40.0%
!!	GTTCTGGCTTTAAGATGTTG+TGG	-	chr4_1:85520569-85520588	Msa0580440:intron	40.0%
	GTGCAAAATCATTGCATCTG+AGG	+	chr4_1:85520676-85520695	None:intergenic	40.0%
	TAGAACCCAAAACCTGAAAC+AGG	+	chr4_1:85520763-85520782	None:intergenic	40.0%
!!	AACTTGCCAACATTTTTGGG+TGG	-	chr4_1:85520978-85520997	Msa0580440:intron	40.0%
	CACAACAATGTGGTTTCAGA+AGG	-	chr4_1:85521418-85521437	Msa0580440:intron	40.0%
	AGGATCATTGATGTCCGAAA+CGG	-	chr4_1:85521438-85521457	Msa0580440:intron	40.0%
	GCAAGGATCCCTACATAATA+AGG	+	chr4_1:85521495-85521514	None:intergenic	40.0%
	AAGTATGTGTTTGGCACTTG+AGG	-	chr4_1:85521561-85521580	Msa0580440:intron	40.0%
!	CTTCTGGTGTTAAGGGATTG+AGG	-	chr4_1:85519160-85519179	Msa0580440:three_prime_UTR	45.0%
	TCCCAATGCGTTTCAATAGG+AGG	+	chr4_1:85519201-85519220	None:intergenic	45.0%
	CTGTATTGCCTTTGACGTCA+AGG	-	chr4_1:85519511-85519530	Msa0580440:intron	45.0%
	CTTTGACGTCAAGGTTTCTG+CGG	-	chr4_1:85519520-85519539	Msa0580440:intron	45.0%
	TCAACTCCATGGTATCCATG+AGG	+	chr4_1:85519931-85519950	None:intergenic	45.0%
	AGCTTCCACCACAAGTATCT+TGG	-	chr4_1:85520116-85520135	Msa0580440:intron	45.0%
	GACATCCAAGATACTTGTGG+TGG	+	chr4_1:85520124-85520143	None:intergenic	45.0%
	TCCATGAAGATGTACCTTGC+AGG	+	chr4_1:85520266-85520285	None:intergenic	45.0%
	TAGCTCATGCGGAGATGATT+TGG	-	chr4_1:85520337-85520356	Msa0580440:intron	45.0%
	TTGCTACTGTGCGTTCACTT+AGG	+	chr4_1:85520612-85520631	None:intergenic	45.0%
	TGTATCAACCTCTAGCTGAC+AGG	-	chr4_1:85520709-85520728	Msa0580440:intron	45.0%
!	TTACCTCAGTGTGTTGCTAG+AGG	-	chr4_1:85520784-85520803	Msa0580440:intron	45.0%
	TATCCTCTAGCAACACACTG+AGG	+	chr4_1:85520790-85520809	None:intergenic	45.0%
	TGCTAGAGGATATTGATCCG+AGG	-	chr4_1:85520798-85520817	Msa0580440:intron	45.0%
!	TGCACATGTTCTGAGTATGG+AGG	-	chr4_1:85521005-85521024	Msa0580440:intron	45.0%
	GGTTGCTTGATGAGTGATCA+AGG	-	chr4_1:85521026-85521045	Msa0580440:intron	45.0%
	TTTGTTCTTGGCCGAAAGCA+TGG	+	chr4_1:85521261-85521280	None:intergenic	45.0%
	CTAGAACAGGCTTGTCATGT+AGG	-	chr4_1:85521596-85521615	Msa0580440:CDS	45.0%
!!	GATTGGCTTGAAGCTAGTCT+TGG	-	chr4_1:85521637-85521656	Msa0580440:CDS	45.0%
	TGCACTTCAAGACACCAAGA+TGG	-	chr4_1:85521782-85521801	Msa0580440:CDS	45.0%
	TGTCATTGAGCTCACCATCT+TGG	+	chr4_1:85521799-85521818	None:intergenic	45.0%
!!!	TTAAATATGAAATTTTTATT+TGG	-	chr4_1:85519672-85519691	Msa0580440:intron	5.0%
	ATGAGTACTCCAACGGCGAA+AGG	-	chr4_1:85519087-85519106	Msa0580440:three_prime_UTR	50.0%
	TCGCGAAATGCTTTCACGTG+AGG	-	chr4_1:85519374-85519393	Msa0580440:intron	50.0%
	CGCGAAATGCTTTCACGTGA+GGG	-	chr4_1:85519375-85519394	Msa0580440:intron	50.0%
	CGCAGAAACCTTGACGTCAA+AGG	+	chr4_1:85519522-85519541	None:intergenic	50.0%
	GCCTGCAAGGTACATCTTCA+TGG	-	chr4_1:85520262-85520281	Msa0580440:intron	50.0%
	AACACAAGCCTGTCAGCTAG+AGG	+	chr4_1:85520720-85520739	None:intergenic	50.0%
	TGATGAGTGATCAAGGCCCA+TGG	-	chr4_1:85521033-85521052	Msa0580440:intron	50.0%
	CATGCAGACAACGGAAGAGA+TGG	-	chr4_1:85521381-85521400	Msa0580440:intron	50.0%
	CAGACAACGGAAGAGATGGA+TGG	-	chr4_1:85521385-85521404	Msa0580440:intron	50.0%
	TGCGTGCGAACACAACAATG+TGG	-	chr4_1:85521408-85521427	Msa0580440:intron	50.0%
	TGGCACTTGAGGAGACAACA+AGG	-	chr4_1:85521572-85521591	Msa0580440:intron	50.0%
	GGCACTTGAGGAGACAACAA+GGG	-	chr4_1:85521573-85521592	Msa0580440:intron	50.0%
	GAGACAACAAGGGCTAGAAC+AGG	-	chr4_1:85521583-85521602	Msa0580440:CDS	50.0%
	CTGTCTTCGCCTTTCGCCGT+TGG	+	chr4_1:85519099-85519118	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_1	gene	85518999	85522215	85518999	ID=Msa0580440;Name=Msa0580440
chr4_1	mRNA	85518999	85522215	85518999	ID=Msa0580440-mRNA-1;Parent=Msa0580440;Name=Msa0580440-mRNA-1;_AED=0.12;_eAED=0.12;_QI=88\|0.9\|0.90\|1\|1\|1\|11\|300\|449
chr4_1	exon	85518999	85519334	85518999	ID=Msa0580440-mRNA-1:exon:31474;Parent=Msa0580440-mRNA-1
chr4_1	exon	85519411	85519455	85519411	ID=Msa0580440-mRNA-1:exon:31473;Parent=Msa0580440-mRNA-1
chr4_1	exon	85519542	85519679	85519542	ID=Msa0580440-mRNA-1:exon:31472;Parent=Msa0580440-mRNA-1
chr4_1	exon	85519755	85519826	85519755	ID=Msa0580440-mRNA-1:exon:31471;Parent=Msa0580440-mRNA-1
chr4_1	exon	85520129	85520237	85520129	ID=Msa0580440-mRNA-1:exon:31470;Parent=Msa0580440-mRNA-1
chr4_1	exon	85520395	85520444	85520395	ID=Msa0580440-mRNA-1:exon:31469;Parent=Msa0580440-mRNA-1
chr4_1	exon	85520575	85520676	85520575	ID=Msa0580440-mRNA-1:exon:31468;Parent=Msa0580440-mRNA-1
chr4_1	exon	85520895	85520972	85520895	ID=Msa0580440-mRNA-1:exon:31467;Parent=Msa0580440-mRNA-1
chr4_1	exon	85521062	85521328	85521062	ID=Msa0580440-mRNA-1:exon:31466;Parent=Msa0580440-mRNA-1
chr4_1	exon	85521582	85521681	85521582	ID=Msa0580440-mRNA-1:exon:31465;Parent=Msa0580440-mRNA-1
chr4_1	exon	85521775	85522215	85521775	ID=Msa0580440-mRNA-1:exon:31464;Parent=Msa0580440-mRNA-1
chr4_1	five_prime_UTR	85522128	85522215	85522128	ID=Msa0580440-mRNA-1:five_prime_utr;Parent=Msa0580440-mRNA-1
chr4_1	CDS	85521775	85522127	85521775	ID=Msa0580440-mRNA-1:cds;Parent=Msa0580440-mRNA-1
chr4_1	CDS	85521582	85521681	85521582	ID=Msa0580440-mRNA-1:cds;Parent=Msa0580440-mRNA-1
chr4_1	CDS	85521062	85521328	85521062	ID=Msa0580440-mRNA-1:cds;Parent=Msa0580440-mRNA-1
chr4_1	CDS	85520895	85520972	85520895	ID=Msa0580440-mRNA-1:cds;Parent=Msa0580440-mRNA-1
chr4_1	CDS	85520575	85520676	85520575	ID=Msa0580440-mRNA-1:cds;Parent=Msa0580440-mRNA-1
chr4_1	CDS	85520395	85520444	85520395	ID=Msa0580440-mRNA-1:cds;Parent=Msa0580440-mRNA-1
chr4_1	CDS	85520129	85520237	85520129	ID=Msa0580440-mRNA-1:cds;Parent=Msa0580440-mRNA-1
chr4_1	CDS	85519755	85519826	85519755	ID=Msa0580440-mRNA-1:cds;Parent=Msa0580440-mRNA-1
chr4_1	CDS	85519542	85519679	85519542	ID=Msa0580440-mRNA-1:cds;Parent=Msa0580440-mRNA-1
chr4_1	CDS	85519411	85519455	85519411	ID=Msa0580440-mRNA-1:cds;Parent=Msa0580440-mRNA-1
chr4_1	CDS	85519299	85519334	85519299	ID=Msa0580440-mRNA-1:cds;Parent=Msa0580440-mRNA-1
chr4_1	three_prime_UTR	85518999	85519298	85518999	ID=Msa0580440-mRNA-1:three_prime_utr;Parent=Msa0580440-mRNA-1

Gene Sequence

>Msa0580440

ATGAGTACTCCAACGGCGAAAGGCGAAGACAGAGATATTGTTATAACAAGAAGTGATAGAAAAGATGCATCATCTTCTGGTGTTAAGGGATTGAGGACCAAATCAATTCATCCTCCTATTGAAACGCATTGGGATCTTCCTACTACACAAAAAGGAAAGAAAAAAGCTTCATTCTCCATCAAGTCATTGTTGTCTTATCCGCTCATGAAATTTGGAAGGAGTAAAAGTTTGGAAAAGGTTCTAGAAGGAACTCATGATCCAAATGATGAACAAATTGTTGAGGCTTTTCGCGAAATGCTTTCACGTGAGGGTCTATTACCACCTAAACACAATGATTATCATACTCTTCTAAGGTTTCTGCGGATGAATGATTTTGATATGACAATATCCAAAGATATGTTTCTCAATTATCTGAAATGGCGAAAGGAATTTCGAGTCGACATGATTCATAAGGAATTCAAATTCACAGAATACACAGAAGTGAAAAAATACTATCCTCATGGATACCATGGAGTTGATAAATGTGGCAGACCTGTGTATATTGAGAGAATTGGGATGATAGATATTAACAAACTGTGGCAAATAACCACACAAGAAAGGCTTATCAAGCATCATGTGTCAGAACAAGAGAAAACACTAAGAGTAAGATACCCTGCATGTTCATTAGCAGCTAAAAGACACATAGCTTCCACCACAAGTATCTTGGATGTCAATGGAGTAGGAATGTCTAATTTCTCAAAGCCTGCAAGGTACATCTTCATGGAAATTCAGAAGATTGATAGCAGTTATTATCCTGAGACTCTAAATAAACTCTTTATTATTAATGCTGGTTCTGGCTTTAAGATGTTGTGGAAAGCAGTGAAAGCATTCCTAAGTGAACGCACAGTAGCAAAAATTCAAGTTTTGGGTTCTAATTACCTCAGTGTGTTGCTAGAGGATATTGATCCGAGTAACTTGCCAACATTTTTGGGTGGTAATTGCACATGTTCTGAGTATGGAGGTTGCTTGATGAGTGATCAAGGCCCATGGAAAAATCCAGAATTGTTAGAAATGATTCAGACAACGGAAGAGATGGATGGTGCGTGCGAACACAACAATGTGGTTTCAGAAGGATCATTGATGTCCGAAACGGTTGAAATGCAAAACAAAGATGATCTAAGTATGTGTTTGGCACTTGAGGAGACAACAAGGGCTAGAACAGGCTTGTCATGTAGGTTAGCATTACAAAAAATTGATTGGCTTGAAGCTAGTCTTGGAGATATCAAGAATCAGAAAATAAAGACATTAGAAGATGCACTTCAAGACACCAAGATGGCATTGAAAGAACTTGCACAACATATAGAACAATAA

Protein sequence

>Msa0580440

MSTPTAKGEDRDIVITRSDRKDASSSGVKGLRTKSIHPPIETHWDLPTTQKGKKKASFSIKSLLSYPLMKFGRSKSLEKVLEGTHDPNDEQIVEAFREMLSREGLLPPKHNDYHTLLRFLRMNDFDMTISKDMFLNYLKWRKEFRVDMIHKEFKFTEYTEVKKYYPHGYHGVDKCGRPVYIERIGMIDINKLWQITTQERLIKHHVSEQEKTLRVRYPACSLAAKRHIASTTSILDVNGVGMSNFSKPARYIFMEIQKIDSSYYPETLNKLFIINAGSGFKMLWKAVKAFLSERTVAKIQVLGSNYLSVLLEDIDPSNLPTFLGGNCTCSEYGGCLMSDQGPWKNPELLEMIQTTEEMDGACEHNNVVSEGSLMSETVEMQNKDDLSMCLALEETTRARTGLSCRLALQKIDWLEASLGDIKNQKIKTLEDALQDTKMALKELAQHIEQ*