Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1301750 | A0A396IHE8 | 97.744 | 798 | 18 | 0 | 1 | 798 | 47 | 844 | 0.0 | 1576 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0007850 | Msa1301750 | 0.811201 | 7.880782e-51 | -8.615850e-47 |
Msa0047250 | Msa1301750 | 0.806828 | 6.804359e-50 | -8.615850e-47 |
Msa0056270 | Msa1301750 | 0.808903 | 2.464268e-50 | -8.615850e-47 |
Msa0609000 | Msa1301750 | 0.805138 | 1.542644e-49 | -8.615850e-47 |
Msa0706390 | Msa1301750 | 0.814388 | 1.580716e-51 | -8.615850e-47 |
Msa0707390 | Msa1301750 | 0.818522 | 1.875738e-52 | -8.615850e-47 |
Msa0724150 | Msa1301750 | 0.809642 | 1.710722e-50 | -8.615850e-47 |
Msa0744090 | Msa1301750 | 0.800739 | 1.251405e-48 | -8.615850e-47 |
Msa1227690 | Msa1301750 | 0.802040 | 6.775212e-49 | -8.615850e-47 |
Msa1254710 | Msa1301750 | 0.808838 | 2.544170e-50 | -8.615850e-47 |
Msa1294840 | Msa1301750 | 0.806585 | 7.658038e-50 | -8.615850e-47 |
Msa1301750 | Msa1340830 | 0.823647 | 1.237580e-53 | -8.615850e-47 |
Msa1301750 | Msa1365860 | 0.808172 | 3.528881e-50 | -8.615850e-47 |
Msa1301750 | Msa1372310 | 0.805508 | 1.290291e-49 | -8.615850e-47 |
Msa1301750 | Msa1408150 | 0.803996 | 2.670240e-49 | -8.615850e-47 |
Msa1025940 | Msa1301750 | 0.838405 | 2.932255e-57 | -8.615850e-47 |
Msa0267870 | Msa1301750 | 0.830779 | 2.422661e-55 | -8.615850e-47 |
Msa0271810 | Msa1301750 | 0.817320 | 3.506418e-52 | -8.615850e-47 |
Msa0291520 | Msa1301750 | 0.803365 | 3.609931e-49 | -8.615850e-47 |
Msa1178050 | Msa1301750 | 0.832521 | 9.013247e-56 | -8.615850e-47 |
Msa1184370 | Msa1301750 | 0.808138 | 3.587783e-50 | -8.615850e-47 |
Msa1186130 | Msa1301750 | 0.800952 | 1.132231e-48 | -8.615850e-47 |
Msa1201830 | Msa1301750 | 0.806650 | 7.419873e-50 | -8.615850e-47 |
Msa0484290 | Msa1301750 | 0.801602 | 8.335179e-49 | -8.615850e-47 |
Msa0960830 | Msa1301750 | 0.805773 | 1.135462e-49 | -8.615850e-47 |
Msa0963020 | Msa1301750 | 0.815883 | 7.358666e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1301750 | MtrunA17_Chr4g0065291 | 97.744 | 798 | 18 | 0 | 1 | 798 | 47 | 844 | 0.0 | 1576 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1301750 | AT3G09850.1 | 44.154 | 804 | 376 | 19 | 14 | 798 | 32 | 781 | 3.86e-160 | 484 |
Find 198 sgRNAs with CRISPR-Local
Find 468 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAATGGATTTGCAAAATCTT+TGG | 0.211345 | 8_3:+63916080 | Msa1301750:CDS |
AAAGGAACGTGCTTCTTTAC+AGG | 0.237535 | 8_3:-63917392 | None:intergenic |
TCCTCTTCCAATCGCAATTC+AGG | 0.259203 | 8_3:+63915792 | Msa1301750:CDS |
GTGTCTTCTAGTAGAAATTC+AGG | 0.268370 | 8_3:+63916975 | Msa1301750:CDS |
AATGGATTTGCAAAATCTTT+GGG | 0.269171 | 8_3:+63916081 | Msa1301750:CDS |
AGTCGTACCATGAATTCTTT+TGG | 0.270768 | 8_3:-63917528 | None:intergenic |
TTTCTCGGTTTCCTCATTCT+TGG | 0.273772 | 8_3:+63917477 | Msa1301750:CDS |
ACCAACTCTTGAAGAACTTT+TGG | 0.277807 | 8_3:-63921715 | None:intergenic |
ATCAGGTCATCCAGAATAAA+AGG | 0.279922 | 8_3:-63917410 | None:intergenic |
CGGAGTAGCAGCCAAAATTC+TGG | 0.280659 | 8_3:+63920238 | Msa1301750:CDS |
TTTCTAGCAGAAATGGTTCT+TGG | 0.283239 | 8_3:-63917446 | None:intergenic |
AGATTCATCGTCCTTTAAAA+AGG | 0.287200 | 8_3:+63916893 | Msa1301750:CDS |
TTTGTTGAAGGTTCAGGATT+AGG | 0.287935 | 8_3:+63921921 | Msa1301750:CDS |
GAAATTGGAAAAGATTGTTT+TGG | 0.294257 | 8_3:+63919173 | Msa1301750:intron |
AGACAGCAAGAACTTCAATT+TGG | 0.300216 | 8_3:+63921270 | Msa1301750:CDS |
ATGGGATTTGTTGAAGGTTC+AGG | 0.301295 | 8_3:+63921915 | Msa1301750:CDS |
AACCAAGTGATTTCGGCCTT+TGG | 0.325644 | 8_3:-63921623 | None:intergenic |
TCTCTGCTGGCTGAGTTCTT+TGG | 0.327169 | 8_3:-63921306 | None:intergenic |
AATCACTGTTAAAGTTATCT+AGG | 0.331999 | 8_3:+63922127 | Msa1301750:three_prime_UTR |
CGTAAAGTGAAGGACAATAA+AGG | 0.335267 | 8_3:+63921333 | Msa1301750:CDS |
TTTCGTGAACTTCAGTTGTT+AGG | 0.336856 | 8_3:+63921138 | Msa1301750:intron |
GGATCTTCAACTTCAGGTAT+TGG | 0.337942 | 8_3:+63921843 | Msa1301750:CDS |
AGTTCTTTGGTGTCCTGCTC+TGG | 0.340865 | 8_3:-63921293 | None:intergenic |
GAGGTACACACTACTGGTTT+TGG | 0.344696 | 8_3:+63921513 | Msa1301750:CDS |
CTCACTGATTTCTTGTTCAT+AGG | 0.346899 | 8_3:-63921198 | None:intergenic |
AAGGACGATGAATCTAAAAC+TGG | 0.351299 | 8_3:-63916885 | None:intergenic |
CAAGACGCCTCCAGGGAATA+TGG | 0.351405 | 8_3:+63917338 | Msa1301750:CDS |
ACACCTAAACCAAGTGATTT+CGG | 0.352192 | 8_3:-63921630 | None:intergenic |
CTGCTCCATTGGGCGCTGTT+CGG | 0.353983 | 8_3:+63921964 | Msa1301750:CDS |
CAGGTCTTTGCCTCCATGGT+TGG | 0.354838 | 8_3:-63917373 | None:intergenic |
AAAACATCATCGATGCAAAA+TGG | 0.357549 | 8_3:+63917222 | Msa1301750:CDS |
AGGCCGAAATCACTTGGTTT+AGG | 0.361537 | 8_3:+63921627 | Msa1301750:CDS |
ATGCTTCTTTCTAGCAGAAA+TGG | 0.362301 | 8_3:-63917453 | None:intergenic |
GGATCTTCAACTTCAGGTAT+TGG | 0.364462 | 8_3:+63921798 | Msa1301750:CDS |
CTACTAGAAGACACCTTTGA+TGG | 0.365401 | 8_3:-63916966 | None:intergenic |
AGGTGGATTCTTATCCGATT+GGG | 0.368932 | 8_3:+63915764 | Msa1301750:CDS |
AGGTCTTTGCCTCCATGGTT+GGG | 0.375090 | 8_3:-63917372 | None:intergenic |
GAAGTCTCGCGTGGTGGGAT+TGG | 0.375705 | 8_3:+63916612 | Msa1301750:CDS |
TCCACACTGTTCTGCTTTGA+AGG | 0.386666 | 8_3:-63916735 | None:intergenic |
TGAGGTTGCAGAAGATTATC+TGG | 0.387013 | 8_3:+63917181 | Msa1301750:CDS |
CTAGAAAGAAGCATGTTTCT+CGG | 0.388329 | 8_3:+63917462 | Msa1301750:CDS |
GGTGGTTCAAATAACAAATC+TGG | 0.392760 | 8_3:+63916024 | Msa1301750:CDS |
ATTACATCTAAATTAACCTT+TGG | 0.393075 | 8_3:-63922012 | None:intergenic |
TCATCTGACTCGTCCACAAC+AGG | 0.393180 | 8_3:-63917254 | None:intergenic |
TTGAATCTGTGACCAACTAT+TGG | 0.394755 | 8_3:+63922248 | Msa1301750:three_prime_UTR |
AAGTCTCGCGTGGTGGGATT+GGG | 0.395645 | 8_3:+63916613 | Msa1301750:CDS |
TGATCTTGAGAAAATTAATT+CGG | 0.397477 | 8_3:+63918198 | Msa1301750:CDS |
CGGCCTTTGGATAACCTCAA+TGG | 0.399137 | 8_3:-63921610 | None:intergenic |
GAGCAATAATTTGATTCTGC+TGG | 0.402395 | 8_3:-63916695 | None:intergenic |
ATTTGGATTGCAGGTAGAAA+TGG | 0.402640 | 8_3:+63916003 | Msa1301750:intron |
AAAGCCTCCAAAAGAATTCA+TGG | 0.406585 | 8_3:+63917521 | Msa1301750:CDS |
TTTACAGGTCTTTGCCTCCA+TGG | 0.407110 | 8_3:-63917377 | None:intergenic |
AGTAGAAGAGGAAGAGGTAG+AGG | 0.409250 | 8_3:+63915657 | Msa1301750:CDS |
CACTTTACGTCTGTCTCTGC+TGG | 0.414736 | 8_3:-63921319 | None:intergenic |
ACCAATACTTGAAGAGCCTT+TGG | 0.416078 | 8_3:-63921754 | None:intergenic |
CAATAAAGGGAGCGAACAAA+AGG | 0.419499 | 8_3:+63921347 | Msa1301750:CDS |
GGTGAGGCTTTGGAGAAGTT+GGG | 0.423356 | 8_3:+63917302 | Msa1301750:CDS |
GGCCTTTGGATAACCTCAAT+GGG | 0.431755 | 8_3:-63921609 | None:intergenic |
GGTGGAAGTAGAAGAGGAAG+AGG | 0.434037 | 8_3:+63915651 | Msa1301750:CDS |
ATCAAAGATGATGGCAAAGA+TGG | 0.434528 | 8_3:+63921896 | Msa1301750:CDS |
TTATTCTTCACCTGATGTAC+AGG | 0.436427 | 8_3:+63916122 | Msa1301750:CDS |
TATCCCTTCAAGACGCCTCC+AGG | 0.442079 | 8_3:+63917330 | Msa1301750:CDS |
ACAAGGTATTACTGCTCCAT+TGG | 0.445783 | 8_3:+63921953 | Msa1301750:CDS |
CGGTAGCTATGGTGAGGCTT+TGG | 0.449089 | 8_3:+63917292 | Msa1301750:CDS |
AACTTCAATTTGGCCAGAGC+AGG | 0.451062 | 8_3:+63921280 | Msa1301750:CDS |
ACCAAAGGCTCTTCAAGTAT+TGG | 0.451271 | 8_3:+63921753 | Msa1301750:CDS |
TGGTGAGGCTTTGGAGAAGT+TGG | 0.451946 | 8_3:+63917301 | Msa1301750:CDS |
TGCAAGTGGTAGACAGCGCC+TGG | 0.452863 | 8_3:+63920400 | Msa1301750:CDS |
AACACGAGCGGAAGCGGTAG+TGG | 0.453272 | 8_3:+63915687 | Msa1301750:CDS |
TCAGGGTTTCTTTCCATTGG+CGG | 0.454117 | 8_3:+63916993 | Msa1301750:CDS |
GGATAGAAACTGTGATCAAA+TGG | 0.454531 | 8_3:+63916932 | Msa1301750:CDS |
TCTTCTGAGCAAGAAGTACT+TGG | 0.456310 | 8_3:+63917101 | Msa1301750:CDS |
TGCAAACAAACCTGTACATC+AGG | 0.459981 | 8_3:-63916132 | None:intergenic |
GTTACCAAAGTCACGAGGAC+TGG | 0.461007 | 8_3:+63921986 | Msa1301750:CDS |
GGTCACAGATTCAATGTAGC+AGG | 0.462618 | 8_3:-63922239 | None:intergenic |
ATTCCCTGGAGGCGTCTTGA+AGG | 0.463302 | 8_3:-63917334 | None:intergenic |
GCGCCCAGTCCTCGTGACTT+TGG | 0.473491 | 8_3:-63921990 | None:intergenic |
GCAAAGATGGGATTTGTTGA+AGG | 0.473979 | 8_3:+63921909 | Msa1301750:CDS |
TGGTAGACAGCGCCTGGAAA+AGG | 0.475024 | 8_3:+63920406 | Msa1301750:CDS |
AGCAATAATTTGATTCTGCT+GGG | 0.475436 | 8_3:-63916694 | None:intergenic |
AATTCAGGGTTTCTTTCCAT+TGG | 0.476997 | 8_3:+63916990 | Msa1301750:CDS |
ACCAAAAGTTCTTCAAGAGT+TGG | 0.477228 | 8_3:+63921714 | Msa1301750:CDS |
GACTGATAGTGCAAATAAGA+AGG | 0.478037 | 8_3:+63921458 | Msa1301750:CDS |
GGATGACCTGATGCTCGAAA+AGG | 0.478157 | 8_3:+63917421 | Msa1301750:CDS |
ATGGGAGGTGGAAGTAGAAG+AGG | 0.479292 | 8_3:+63915645 | Msa1301750:CDS |
ATCCAAAGGCCGAAATCACT+TGG | 0.483163 | 8_3:+63921621 | Msa1301750:CDS |
ACAAAAGGATCTTCAACTTC+AGG | 0.485803 | 8_3:+63921792 | Msa1301750:CDS |
ACAAAAGGATCTTCAACTTC+AGG | 0.485803 | 8_3:+63921837 | Msa1301750:CDS |
AAGGTGGATTCTTATCCGAT+TGG | 0.487065 | 8_3:+63915763 | Msa1301750:CDS |
ACCTGAATTGCGATTGGAAG+AGG | 0.489536 | 8_3:-63915793 | None:intergenic |
GTAAAGTGAAGGACAATAAA+GGG | 0.492438 | 8_3:+63921334 | Msa1301750:CDS |
GATTATCTGGAAGGAGTTGG+TGG | 0.493687 | 8_3:+63917194 | Msa1301750:CDS |
GCCAAAATTCTGGGAAAAGA+AGG | 0.494554 | 8_3:+63920248 | Msa1301750:CDS |
GATAGTTCTCATAGAGGACT+AGG | 0.495640 | 8_3:+63916792 | Msa1301750:CDS |
GGAGTAGCAGCCAAAATTCT+GGG | 0.504329 | 8_3:+63920239 | Msa1301750:CDS |
CAAGGTATTACTGCTCCATT+GGG | 0.508666 | 8_3:+63921954 | Msa1301750:CDS |
TGGCAGGAGTTTATCAGTTG+CGG | 0.511083 | 8_3:+63920218 | Msa1301750:CDS |
TTGCTCTTCTGAGCATGTGA+AGG | 0.513482 | 8_3:-63917500 | None:intergenic |
GTGGAATATACATACAGTTA+TGG | 0.514442 | 8_3:+63916753 | Msa1301750:CDS |
AGAACCAACATTAGCAGAGC+TGG | 0.514799 | 8_3:-63921487 | None:intergenic |
AGATCCAACACGAGCGGAAG+CGG | 0.521005 | 8_3:+63915681 | Msa1301750:CDS |
TTTCATCATGCCATATTCCC+TGG | 0.521306 | 8_3:-63917348 | None:intergenic |
TGTCTTCTAGTAGAAATTCA+GGG | 0.524061 | 8_3:+63916976 | Msa1301750:CDS |
GCCACCAGCTCTGCTAATGT+TGG | 0.526599 | 8_3:+63921483 | Msa1301750:CDS |
ATATAGGTACAGCGGTTGGC+AGG | 0.527805 | 8_3:+63920202 | Msa1301750:intron |
ATGATGTGATAGTGCCACTT+GGG | 0.528105 | 8_3:-63916839 | None:intergenic |
AGTTCTTCCAGCGGTAGCTA+TGG | 0.533008 | 8_3:+63917281 | Msa1301750:CDS |
GGAAGAGGAAGGACCCCAAT+CGG | 0.535272 | 8_3:-63915778 | None:intergenic |
CTACGTAGAGGAGAAGCGTC+TGG | 0.535956 | 8_3:+63916051 | Msa1301750:CDS |
AGCCTCACCATAGCTACCGC+TGG | 0.539111 | 8_3:-63917288 | None:intergenic |
AACCCGAAAACCCGTAAAAG+AGG | 0.541769 | 8_3:+63915711 | Msa1301750:CDS |
GATGGAACCTGAATTGCGAT+TGG | 0.542489 | 8_3:-63915799 | None:intergenic |
TGGGATTCCACCATAACAAA+AGG | 0.542965 | 8_3:-63916675 | None:intergenic |
ATGGGATACACTGAAGGAGG+GGG | 0.545803 | 8_3:+63921555 | Msa1301750:CDS |
CCACGAGTTCATCCAATAGT+TGG | 0.547292 | 8_3:-63922260 | None:intergenic |
ACTACCGCTTCCGCTCGTGT+TGG | 0.549189 | 8_3:-63915685 | None:intergenic |
TCACGAGGACTGGGCGCCAA+AGG | 0.550474 | 8_3:+63921996 | Msa1301750:CDS |
ACAACAGTACACAATTAGAA+AGG | 0.550945 | 8_3:-63922046 | None:intergenic |
CGCTGTCTACCACTTGCAGA+TGG | 0.551619 | 8_3:-63920395 | None:intergenic |
GTTGTTAGGAGTTGATGAAG+AGG | 0.552040 | 8_3:+63921152 | Msa1301750:intron |
TTGGGAGATAGTTCTCATAG+AGG | 0.553009 | 8_3:+63916786 | Msa1301750:CDS |
ACCAGGAAGTCTCGCGTGGT+GGG | 0.554154 | 8_3:+63916607 | Msa1301750:intron |
TTCCCTGGAGGCGTCTTGAA+GGG | 0.557047 | 8_3:-63917333 | None:intergenic |
TCAAAGATGATGGCAAAGAT+GGG | 0.557589 | 8_3:+63921897 | Msa1301750:CDS |
GAAGATTATCTGGAAGGAGT+TGG | 0.566201 | 8_3:+63917191 | Msa1301750:CDS |
GGGTTTCGTCATGTTCAGCA+TGG | 0.567965 | 8_3:-63916818 | None:intergenic |
ACACTGTTCTGCTTTGAAGG+AGG | 0.570191 | 8_3:-63916732 | None:intergenic |
GATGATGTGATAGTGCCACT+TGG | 0.570624 | 8_3:-63916840 | None:intergenic |
GTATAACTTAAGACCGCCAA+TGG | 0.571914 | 8_3:-63917006 | None:intergenic |
AAAGGATGTTGGTTCTGATG+AGG | 0.574228 | 8_3:+63916911 | Msa1301750:CDS |
TTACCAAAGTCACGAGGACT+GGG | 0.574667 | 8_3:+63921987 | Msa1301750:CDS |
ATGGATTTGCAAAATCTTTG+GGG | 0.575348 | 8_3:+63916082 | Msa1301750:CDS |
GAGGCTTTGGAGAAGTTGGG+TGG | 0.575721 | 8_3:+63917305 | Msa1301750:CDS |
TGGATTGCAGGTAGAAATGG+TGG | 0.575955 | 8_3:+63916006 | Msa1301750:intron |
GGAAGAAGACTTGCCATCAA+AGG | 0.577067 | 8_3:+63916953 | Msa1301750:CDS |
TACATGTCCTCCATAAAAGT+AGG | 0.584650 | 8_3:-63922200 | None:intergenic |
CCAGTGTCATTTGTATCAAG+CGG | 0.586966 | 8_3:+63921387 | Msa1301750:CDS |
AAAATGGGATACACTGAAGG+AGG | 0.587249 | 8_3:+63921552 | Msa1301750:CDS |
GCATGTGAAGGCCAAGAATG+AGG | 0.587933 | 8_3:-63917488 | None:intergenic |
TTCCAGCGGTAGCTATGGTG+AGG | 0.589555 | 8_3:+63917286 | Msa1301750:CDS |
GGTGGATTCTTATCCGATTG+GGG | 0.594381 | 8_3:+63915765 | Msa1301750:CDS |
GGTGGGATTGGGAACAACAA+TGG | 0.595350 | 8_3:+63916624 | Msa1301750:CDS |
GAAATCACTTGGTTTAGGTG+TGG | 0.596184 | 8_3:+63921632 | Msa1301750:CDS |
AGGACGATGAATCTAAAACT+GGG | 0.596269 | 8_3:-63916884 | None:intergenic |
TGTAGAATGTGTCCGCATCA+CGG | 0.599513 | 8_3:-63920366 | None:intergenic |
AATGGGATACACTGAAGGAG+GGG | 0.599768 | 8_3:+63921554 | Msa1301750:CDS |
ATTGGGAACAACAATGGAGA+TGG | 0.602466 | 8_3:+63916630 | Msa1301750:CDS |
ATCCCTTCAAGACGCCTCCA+GGG | 0.603215 | 8_3:+63917331 | Msa1301750:CDS |
CCAACTATTGGATGAACTCG+TGG | 0.605623 | 8_3:+63922260 | Msa1301750:three_prime_UTR |
TTAAGTGTTGTGATCTTACG+TGG | 0.605767 | 8_3:+63922071 | Msa1301750:three_prime_UTR |
ATTCCACCATAACAAAAGGT+TGG | 0.605848 | 8_3:-63916671 | None:intergenic |
TCAGATTTGTGACCGTGATG+CGG | 0.608465 | 8_3:+63920354 | Msa1301750:intron |
AATAAAGGGAGCGAACAAAA+GGG | 0.610627 | 8_3:+63921348 | Msa1301750:CDS |
GCATTCTCGAGATTGCTCAC+AGG | 0.613292 | 8_3:+63919227 | Msa1301750:CDS |
ACTGATAGTGCAAATAAGAA+GGG | 0.614152 | 8_3:+63921459 | Msa1301750:CDS |
GCTAAAATGGGATACACTGA+AGG | 0.615184 | 8_3:+63921549 | Msa1301750:CDS |
GAGCAATCTCGAGAATGCAT+AGG | 0.616893 | 8_3:-63919222 | None:intergenic |
ATGAATATAGGTACAGCGGT+TGG | 0.619713 | 8_3:+63920198 | Msa1301750:intron |
GCATGATGAAAGCCCAACCA+TGG | 0.621804 | 8_3:+63917360 | Msa1301750:CDS |
ATTGTTAAAAGGGTGTCCGT+TGG | 0.622933 | 8_3:-63922316 | None:intergenic |
GATCCAGCAAGGGACAGTAT+CGG | 0.623134 | 8_3:+63921675 | Msa1301750:CDS |
GTTGCAGAAGATTATCTGGA+AGG | 0.624706 | 8_3:+63917185 | Msa1301750:CDS |
ACATCGATGCCATCTGCAAG+TGG | 0.624959 | 8_3:+63920386 | Msa1301750:CDS |
AGGTATGGCTCAGCCCATTG+AGG | 0.628083 | 8_3:+63921596 | Msa1301750:CDS |
GGAAACAAAATAAGAAAACT+CGG | 0.633851 | 8_3:+63922176 | Msa1301750:three_prime_UTR |
GAAAAGACATCTGATGAGGA+CGG | 0.634225 | 8_3:+63917071 | Msa1301750:CDS |
AAATGGGATACACTGAAGGA+GGG | 0.635043 | 8_3:+63921553 | Msa1301750:CDS |
TAACTTGTACAGTTTCTGAG+TGG | 0.637836 | 8_3:-63921416 | None:intergenic |
TGATTCAGACATTGATGATG+AGG | 0.638404 | 8_3:+63917163 | Msa1301750:CDS |
GTCACAGATTCAATGTAGCA+GGG | 0.640884 | 8_3:-63922238 | None:intergenic |
CATCTGACTCGTCCACAACA+GGG | 0.642232 | 8_3:-63917253 | None:intergenic |
GGACGATGAATCTAAAACTG+GGG | 0.648232 | 8_3:-63916883 | None:intergenic |
CAGAGACAGACGTAAAGTGA+AGG | 0.648868 | 8_3:+63921323 | Msa1301750:CDS |
GTGGTAATTCATCGTTACCG+TGG | 0.649089 | 8_3:+63922090 | Msa1301750:three_prime_UTR |
CAATGTTGATGATCCAGCAA+GGG | 0.649862 | 8_3:+63921665 | Msa1301750:CDS |
TGATGTGATAGTGCCACTTG+GGG | 0.655301 | 8_3:-63916838 | None:intergenic |
GCAATGTTGATGATCCAGCA+AGG | 0.655723 | 8_3:+63921664 | Msa1301750:CDS |
CTCCATGAATATAGGTACAG+CGG | 0.656226 | 8_3:+63920194 | Msa1301750:intron |
CCGCTTGATACAAATGACAC+TGG | 0.657929 | 8_3:-63921387 | None:intergenic |
ACCAACATTAGCAGAGCTGG+TGG | 0.659686 | 8_3:-63921484 | None:intergenic |
AGCCCATTGAGGTTATCCAA+AGG | 0.665722 | 8_3:+63921607 | Msa1301750:CDS |
CATTGAAAAGACATCTGATG+AGG | 0.669248 | 8_3:+63917067 | Msa1301750:CDS |
AGAGGAAGATCCAACACGAG+CGG | 0.669811 | 8_3:+63915675 | Msa1301750:CDS |
TGGGATACACTGAAGGAGGG+GGG | 0.670387 | 8_3:+63921556 | Msa1301750:CDS |
TGATACTGAAGCTGTACCAA+CGG | 0.673061 | 8_3:+63922300 | Msa1301750:three_prime_UTR |
GAATTGCGATTGGAAGAGGA+AGG | 0.674217 | 8_3:-63915789 | None:intergenic |
CATCATGCCATATTCCCTGG+AGG | 0.682222 | 8_3:-63917345 | None:intergenic |
GTATACCAGGAAGTCTCGCG+TGG | 0.684378 | 8_3:+63916603 | Msa1301750:intron |
GATGATGATAGTTCTTCCAG+CGG | 0.696571 | 8_3:+63917272 | Msa1301750:CDS |
AAATCTGGTAGTCTACGTAG+AGG | 0.698660 | 8_3:+63916039 | Msa1301750:CDS |
TCCTTCAAAGCAGAACAGTG+TGG | 0.701697 | 8_3:+63916734 | Msa1301750:CDS |
GAACATGACGAAACCCCAAG+TGG | 0.708926 | 8_3:+63916825 | Msa1301750:CDS |
TGATGAAAGCCCAACCATGG+AGG | 0.712996 | 8_3:+63917363 | Msa1301750:CDS |
ATGGTTGCTAGACCCTGTTG+TGG | 0.719295 | 8_3:+63917241 | Msa1301750:CDS |
CGGTCTTAAGTTATACACAG+AGG | 0.740461 | 8_3:+63917013 | Msa1301750:CDS |
GGATTAGGTAGAGAATCACA+AGG | 0.757337 | 8_3:+63921936 | Msa1301750:CDS |
GTTCGGTTACCAAAGTCACG+AGG | 0.779476 | 8_3:+63921981 | Msa1301750:CDS |
AGAGAGAGAATGCAACACCG+AGG | 0.788547 | 8_3:+63918172 | Msa1301750:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATAAATTGATAATTTATATC+TGG | + | chr8_3:63915903-63915922 | Msa1301750:intron | 10.0% |
!!! | TAAATTGATAATTTATATCT+GGG | + | chr8_3:63915904-63915923 | Msa1301750:intron | 10.0% |
!!! | AATTAAAAGCATATAATTAA+GGG | - | chr8_3:63917591-63917610 | None:intergenic | 10.0% |
!!! | AAATTAAAAGCATATAATTA+AGG | - | chr8_3:63917592-63917611 | None:intergenic | 10.0% |
!! | TAAAATACAAATAAATCAAT+GGG | - | chr8_3:63918583-63918602 | None:intergenic | 10.0% |
!! | ATAAAATACAAATAAATCAA+TGG | - | chr8_3:63918584-63918603 | None:intergenic | 10.0% |
!! | ATATATTATTTAGTAATCAA+CGG | - | chr8_3:63919443-63919462 | None:intergenic | 10.0% |
!! | TTCAAAAAAATAATATATTG+TGG | + | chr8_3:63919619-63919638 | Msa1301750:intron | 10.0% |
!! | ATTAAATTTAGATTTCTAAT+TGG | + | chr8_3:63919824-63919843 | Msa1301750:intron | 10.0% |
!!! | TTAAAATAATTCAGTATTTT+TGG | - | chr8_3:63920992-63921011 | None:intergenic | 10.0% |
!! | TAAATAATTTAGAGATTATT+AGG | - | chr8_3:63921070-63921089 | None:intergenic | 10.0% |
!!! | GTTTGAGTATTTATTTTATT+TGG | + | chr8_3:63915986-63916005 | Msa1301750:intron | 15.0% |
!! | TAATTAATGATATTAATGCA+AGG | - | chr8_3:63917709-63917728 | None:intergenic | 15.0% |
!! | ATCCAAAAAAAAAAAAGTTA+GGG | - | chr8_3:63919149-63919168 | None:intergenic | 15.0% |
!! | AATCCAAAAAAAAAAAAGTT+AGG | - | chr8_3:63919150-63919169 | None:intergenic | 15.0% |
!! | GATTACTAAATAATATATTG+TGG | + | chr8_3:63919445-63919464 | Msa1301750:intron | 15.0% |
!!! | TTGAAAATCAATTTTTGAAT+TGG | - | chr8_3:63919894-63919913 | None:intergenic | 15.0% |
!! | TTAAATAGATGAATATCATA+AGG | - | chr8_3:63920115-63920134 | None:intergenic | 15.0% |
!! | ACAATCAATTATTTGAATAA+GGG | - | chr8_3:63920288-63920307 | None:intergenic | 15.0% |
!! | AACAATCAATTATTTGAATA+AGG | - | chr8_3:63920289-63920308 | None:intergenic | 15.0% |
!!! | ATTTATTTTATTTGGATTGC+AGG | + | chr8_3:63915994-63916013 | Msa1301750:intron | 20.0% |
!! | TATAATTAAGGGAATAACAT+TGG | - | chr8_3:63917580-63917599 | None:intergenic | 20.0% |
!!! | TTTAAATCCCTTGATTATTT+TGG | + | chr8_3:63917739-63917758 | Msa1301750:intron | 20.0% |
!!! | CATGAAATATTAACTTGAAA+TGG | + | chr8_3:63917997-63918016 | Msa1301750:intron | 20.0% |
!!! | AGTGAATGAATTTTAGATAT+TGG | + | chr8_3:63918030-63918049 | Msa1301750:intron | 20.0% |
!! | TGATCTTGAGAAAATTAATT+CGG | + | chr8_3:63918198-63918217 | Msa1301750:CDS | 20.0% |
!! | AACACAGAAATAACTATATT+TGG | - | chr8_3:63918238-63918257 | None:intergenic | 20.0% |
!! | GGATTAAAAAGGAAATATAT+AGG | - | chr8_3:63918483-63918502 | None:intergenic | 20.0% |
!! | TAACAAAATTCAGATTAATG+AGG | - | chr8_3:63919037-63919056 | None:intergenic | 20.0% |
!! | AAAAAAAAAAAAGTTAGGGT+GGG | - | chr8_3:63919145-63919164 | None:intergenic | 20.0% |
!!! | TTTTTTTGGATTCTAGAAAT+TGG | + | chr8_3:63919158-63919177 | Msa1301750:intron | 20.0% |
!!! | TTTGAAATAGCAATACTTTT+TGG | - | chr8_3:63919283-63919302 | None:intergenic | 20.0% |
!!! | TGAGTTTTACAAATAGAAAA+AGG | - | chr8_3:63919648-63919667 | None:intergenic | 20.0% |
!! | AATTTAGATTTCTAATTGGA+CGG | + | chr8_3:63919828-63919847 | Msa1301750:intron | 20.0% |
!!! | ATAAATGTTTTGAAGTTTCA+AGG | - | chr8_3:63920591-63920610 | None:intergenic | 20.0% |
!! | GAAACTTCAAAACATTTATT+TGG | + | chr8_3:63920592-63920611 | Msa1301750:intron | 20.0% |
!!! | TTCTTTTGAAAAACATACAA+AGG | + | chr8_3:63921866-63921885 | Msa1301750:CDS | 20.0% |
!!! | TCTTTTGAAAAACATACAAA+GGG | + | chr8_3:63921867-63921886 | Msa1301750:CDS | 20.0% |
!! | ATTACATCTAAATTAACCTT+TGG | - | chr8_3:63922015-63922034 | None:intergenic | 20.0% |
!!! | TGATTGTAGTTTTTTAACTA+TGG | + | chr8_3:63922155-63922174 | Msa1301750:three_prime_UTR | 20.0% |
!!! | TGAATGTTTTTGTGTTTCAA+TGG | - | chr8_3:63915607-63915626 | None:intergenic | 25.0% |
! | ACAAAAACATTCACGATTAT+TGG | + | chr8_3:63915614-63915633 | Msa1301750:five_prime_UTR | 25.0% |
!! | ATTTGTGTTTTTCTATGCTT+TGG | + | chr8_3:63915964-63915983 | Msa1301750:intron | 25.0% |
!! | AAATGGATTTGCAAAATCTT+TGG | + | chr8_3:63916080-63916099 | Msa1301750:CDS | 25.0% |
!! | AATGGATTTGCAAAATCTTT+GGG | + | chr8_3:63916081-63916100 | Msa1301750:CDS | 25.0% |
!!! | TATGCATTTTTAAGTTTGCT+AGG | + | chr8_3:63916184-63916203 | Msa1301750:intron | 25.0% |
! | TTTGCATCAACAAATTTAGA+TGG | - | chr8_3:63916224-63916243 | None:intergenic | 25.0% |
!!! | ATCCATCAACATAGTTTTAT+AGG | + | chr8_3:63916486-63916505 | Msa1301750:intron | 25.0% |
! | ATCCTATAAAACTATGTTGA+TGG | - | chr8_3:63916491-63916510 | None:intergenic | 25.0% |
!!! | AGTTATGGTGATTTTGTTTT+GGG | + | chr8_3:63916768-63916787 | Msa1301750:CDS | 25.0% |
!!! | TGCTTTAGAAGTTTAAAATG+TGG | - | chr8_3:63917647-63917666 | None:intergenic | 25.0% |
!!! | GCATTGATTTTTTCAGTTAA+AGG | + | chr8_3:63917664-63917683 | Msa1301750:intron | 25.0% |
!! | TTTTCAGTTAAAGGATGATA+TGG | + | chr8_3:63917673-63917692 | Msa1301750:intron | 25.0% |
!! | TATGCATATATTCAAGTTCA+TGG | + | chr8_3:63917938-63917957 | Msa1301750:intron | 25.0% |
! | TTGAGAAAATTAATTCGGTA+AGG | + | chr8_3:63918203-63918222 | Msa1301750:intron | 25.0% |
!!! | ATATAGTTATTTCTGTGTTC+TGG | + | chr8_3:63918239-63918258 | Msa1301750:intron | 25.0% |
! | AAAAGGTAGACAAAAGAAAA+CGG | - | chr8_3:63918282-63918301 | None:intergenic | 25.0% |
! | GAAAGATAAATAGAGAGAAA+AGG | - | chr8_3:63918299-63918318 | None:intergenic | 25.0% |
! | TAACTTCTTGTATCAAAATG+TGG | + | chr8_3:63918370-63918389 | Msa1301750:intron | 25.0% |
! | AATATATAGGTAACAGGATT+AGG | - | chr8_3:63918470-63918489 | None:intergenic | 25.0% |
! | AAAGGAAATATATAGGTAAC+AGG | - | chr8_3:63918476-63918495 | None:intergenic | 25.0% |
! | GAACTTATATGGGATTAAAA+AGG | - | chr8_3:63918494-63918513 | None:intergenic | 25.0% |
! | ACAAAAAGTAAAAGAAGATG+AGG | - | chr8_3:63918989-63919008 | None:intergenic | 25.0% |
! | GAAATACGTGATTCAATATA+AGG | - | chr8_3:63919067-63919086 | None:intergenic | 25.0% |
! | TATTGAATCACGTATTTCTT+TGG | + | chr8_3:63919069-63919088 | Msa1301750:intron | 25.0% |
! | CAAAAAAAAAAAAGTTAGGG+TGG | - | chr8_3:63919146-63919165 | None:intergenic | 25.0% |
!!! | CACCCTAACTTTTTTTTTTT+TGG | + | chr8_3:63919144-63919163 | Msa1301750:intron | 25.0% |
!! | GAAATTGGAAAAGATTGTTT+TGG | + | chr8_3:63919173-63919192 | Msa1301750:intron | 25.0% |
! | AACAATCAAATGCTAACATT+TGG | - | chr8_3:63919952-63919971 | None:intergenic | 25.0% |
! | TTAGCATTTGATTGTTATGT+TGG | + | chr8_3:63919956-63919975 | Msa1301750:intron | 25.0% |
!! | CATTTATTTGGAACATTTGA+TGG | + | chr8_3:63920604-63920623 | Msa1301750:intron | 25.0% |
! | AGATTTGAATAAATACCCAA+TGG | - | chr8_3:63920640-63920659 | None:intergenic | 25.0% |
! | AGAGAAAATAAGTGTCAAAA+GGG | + | chr8_3:63920922-63920941 | Msa1301750:intron | 25.0% |
! | TGAGAAAGAAAAATGCTAAA+AGG | + | chr8_3:63921238-63921257 | Msa1301750:CDS | 25.0% |
! | TTCAAAAATGATGGCTAAAA+TGG | + | chr8_3:63921536-63921555 | Msa1301750:CDS | 25.0% |
! | TCAAAAATGATGGCTAAAAT+GGG | + | chr8_3:63921537-63921556 | Msa1301750:CDS | 25.0% |
! | AATCACTGTTAAAGTTATCT+AGG | + | chr8_3:63922127-63922146 | Msa1301750:three_prime_UTR | 25.0% |
! | GGAAACAAAATAAGAAAACT+CGG | + | chr8_3:63922176-63922195 | Msa1301750:three_prime_UTR | 25.0% |
!! | ATGTTTTTGTGTTTCAATGG+CGG | - | chr8_3:63915604-63915623 | None:intergenic | 30.0% |
ACGATTATTGGAAGCAAAAA+TGG | + | chr8_3:63915626-63915645 | Msa1301750:exon | 30.0% | |
CGATTATTGGAAGCAAAAAT+GGG | + | chr8_3:63915627-63915646 | Msa1301750:exon | 30.0% | |
ATGGATTTGCAAAATCTTTG+GGG | + | chr8_3:63916082-63916101 | Msa1301750:CDS | 30.0% | |
!! | TTAAGTTTGCTAGGTGAAAA+TGG | + | chr8_3:63916193-63916212 | Msa1301750:intron | 30.0% |
TCTGCTAAATATCTTCCTTT+AGG | - | chr8_3:63916434-63916453 | None:intergenic | 30.0% | |
AGGAAGATATTTAGCAGAAA+TGG | + | chr8_3:63916436-63916455 | Msa1301750:intron | 30.0% | |
! | TCAGAGTAACTTGCATTTAT+CGG | + | chr8_3:63916579-63916598 | Msa1301750:intron | 30.0% |
AGCAATAATTTGATTCTGCT+GGG | - | chr8_3:63916697-63916716 | None:intergenic | 30.0% | |
GTGGAATATACATACAGTTA+TGG | + | chr8_3:63916753-63916772 | Msa1301750:CDS | 30.0% | |
!! | CAGTTATGGTGATTTTGTTT+TGG | + | chr8_3:63916767-63916786 | Msa1301750:CDS | 30.0% |
! | AGATTCATCGTCCTTTAAAA+AGG | + | chr8_3:63916893-63916912 | Msa1301750:CDS | 30.0% |
! | AGAACCAACATCCTTTTTAA+AGG | - | chr8_3:63916907-63916926 | None:intergenic | 30.0% |
TGTCTTCTAGTAGAAATTCA+GGG | + | chr8_3:63916976-63916995 | Msa1301750:CDS | 30.0% | |
AAAACATCATCGATGCAAAA+TGG | + | chr8_3:63917222-63917241 | Msa1301750:CDS | 30.0% | |
TAACATTGGATCTTTGACAT+AGG | - | chr8_3:63917566-63917585 | None:intergenic | 30.0% | |
GTAATTTCAATCAGCAAGAA+AGG | - | chr8_3:63917621-63917640 | None:intergenic | 30.0% | |
ATATTAATGCAAGGATCTTC+GGG | - | chr8_3:63917700-63917719 | None:intergenic | 30.0% | |
GATATTAATGCAAGGATCTT+CGG | - | chr8_3:63917701-63917720 | None:intergenic | 30.0% | |
! | TCAAGGGATTTAAAACTTTG+CGG | - | chr8_3:63917733-63917752 | None:intergenic | 30.0% |
GCATTTATCTATTATCCTAG+TGG | + | chr8_3:63917830-63917849 | Msa1301750:intron | 30.0% | |
ACAATCTGACATAAGATTTG+TGG | - | chr8_3:63917878-63917897 | None:intergenic | 30.0% | |
! | AAGGTCTTGTAATTGTAGTA+AGG | + | chr8_3:63918527-63918546 | Msa1301750:intron | 30.0% |
ATTACATATACAGTCGTTGT+AGG | + | chr8_3:63918676-63918695 | Msa1301750:intron | 30.0% | |
ATAAGAAACTACCAACATTC+AGG | + | chr8_3:63918808-63918827 | Msa1301750:intron | 30.0% | |
TAAGAAACTACCAACATTCA+GGG | + | chr8_3:63918809-63918828 | Msa1301750:intron | 30.0% | |
GTTTAATAAACCCTGAATGT+TGG | - | chr8_3:63918822-63918841 | None:intergenic | 30.0% | |
!!! | CTTCGTTGCATTTTTTAATC+TGG | - | chr8_3:63918874-63918893 | None:intergenic | 30.0% |
CAGATTAAAAAATGCAACGA+AGG | + | chr8_3:63918872-63918891 | Msa1301750:intron | 30.0% | |
AAGTAAAAGAAGATGAGGAT+CGG | - | chr8_3:63918984-63919003 | None:intergenic | 30.0% | |
AGATTAATGAGGAGCAAAAA+TGG | - | chr8_3:63919026-63919045 | None:intergenic | 30.0% | |
!!! | ATTGGAAAAGATTGTTTTGG+AGG | + | chr8_3:63919176-63919195 | Msa1301750:CDS | 30.0% |
!! | ACTTTTTGGCCATACTATTT+GGG | - | chr8_3:63919269-63919288 | None:intergenic | 30.0% |
!! | TACTTTTTGGCCATACTATT+TGG | - | chr8_3:63919270-63919289 | None:intergenic | 30.0% |
! | GCTTCTGTTCTATTTTCTTA+AGG | + | chr8_3:63919335-63919354 | Msa1301750:intron | 30.0% |
TGGTTCAAAATTATTATGCC+TGG | - | chr8_3:63919874-63919893 | None:intergenic | 30.0% | |
TAAGGGTTTAAAGGAGTTAA+AGG | - | chr8_3:63920015-63920034 | None:intergenic | 30.0% | |
TAATCAATTAGGAATGCAGT+TGG | - | chr8_3:63920087-63920106 | None:intergenic | 30.0% | |
ACTGCATTCCTAATTGATTA+TGG | + | chr8_3:63920087-63920106 | Msa1301750:intron | 30.0% | |
CTGCATTCCTAATTGATTAT+GGG | + | chr8_3:63920088-63920107 | Msa1301750:intron | 30.0% | |
ATAAGGTCCCATAATCAATT+AGG | - | chr8_3:63920098-63920117 | None:intergenic | 30.0% | |
TGCAAATTTAATGTCTAGTC+TGG | + | chr8_3:63920321-63920340 | Msa1301750:intron | 30.0% | |
! | TTGAATTTATGCTTTTCCTC+TGG | + | chr8_3:63920486-63920505 | Msa1301750:intron | 30.0% |
! | TGAATTTATGCTTTTCCTCT+GGG | + | chr8_3:63920487-63920506 | Msa1301750:intron | 30.0% |
AGGAAAAATGAGTGGAAAAT+GGG | - | chr8_3:63920550-63920569 | None:intergenic | 30.0% | |
TAGGAAAAATGAGTGGAAAA+TGG | - | chr8_3:63920551-63920570 | None:intergenic | 30.0% | |
! | TTTGAAGTTTCAAGGACATT+GGG | - | chr8_3:63920583-63920602 | None:intergenic | 30.0% |
!!! | TTTTGAAGTTTCAAGGACAT+TGG | - | chr8_3:63920584-63920603 | None:intergenic | 30.0% |
TGATGGTTCAATTTAACCAT+TGG | + | chr8_3:63920621-63920640 | Msa1301750:intron | 30.0% | |
GATGGTTCAATTTAACCATT+GGG | + | chr8_3:63920622-63920641 | Msa1301750:intron | 30.0% | |
!! | AACTGCTATTTCAATTACTC+AGG | + | chr8_3:63920671-63920690 | Msa1301750:intron | 30.0% |
!! | ACTGCTATTTCAATTACTCA+GGG | + | chr8_3:63920672-63920691 | Msa1301750:intron | 30.0% |
!! | TGTTTGTTGCATCTTTTTGA+AGG | + | chr8_3:63920829-63920848 | Msa1301750:intron | 30.0% |
GAGAGAAAATAAGTGTCAAA+AGG | + | chr8_3:63920921-63920940 | Msa1301750:intron | 30.0% | |
GAGAAAATAAGTGTCAAAAG+GGG | + | chr8_3:63920923-63920942 | Msa1301750:intron | 30.0% | |
TTATTTCAACCCGTAACAAA+CGG | + | chr8_3:63921105-63921124 | Msa1301750:intron | 30.0% | |
GTAAAGTGAAGGACAATAAA+GGG | + | chr8_3:63921334-63921353 | Msa1301750:CDS | 30.0% | |
! | ACTGATAGTGCAAATAAGAA+GGG | + | chr8_3:63921459-63921478 | Msa1301750:CDS | 30.0% |
!!! | TGGTTTTGGTTCAAAAATGA+TGG | + | chr8_3:63921527-63921546 | Msa1301750:CDS | 30.0% |
!! | TCTTTTGAAAAGCACACAAA+AGG | + | chr8_3:63921777-63921796 | Msa1301750:CDS | 30.0% |
!! | TCTTTTGAAAAGCACACAAA+AGG | + | chr8_3:63921777-63921796 | Msa1301750:CDS | 30.0% |
! | GAAAAACATACAAAGGGTTT+TGG | + | chr8_3:63921873-63921892 | Msa1301750:CDS | 30.0% |
ACAACAGTACACAATTAGAA+AGG | - | chr8_3:63922049-63922068 | None:intergenic | 30.0% | |
!! | ATTTTTAGACAGTCTTTCCA+CGG | - | chr8_3:63922110-63922129 | None:intergenic | 30.0% |
TTATTGGAAGCAAAAATGGG+AGG | + | chr8_3:63915630-63915649 | Msa1301750:exon | 35.0% | |
! | TAGCAACTGAACCTCTTTTA+CGG | - | chr8_3:63915725-63915744 | None:intergenic | 35.0% |
TCTGAGAAATCAAACAGAGA+TGG | - | chr8_3:63915820-63915839 | None:intergenic | 35.0% | |
! | GGCTAATGATTTTGCTTCAT+GGG | + | chr8_3:63915925-63915944 | Msa1301750:intron | 35.0% |
ATTTGGATTGCAGGTAGAAA+TGG | + | chr8_3:63916003-63916022 | Msa1301750:intron | 35.0% | |
GGTGGTTCAAATAACAAATC+TGG | + | chr8_3:63916024-63916043 | Msa1301750:CDS | 35.0% | |
TTATTCTTCACCTGATGTAC+AGG | + | chr8_3:63916122-63916141 | Msa1301750:CDS | 35.0% | |
CATGCACATACATATCCTAA+AGG | + | chr8_3:63916416-63916435 | Msa1301750:intron | 35.0% | |
ATTCCACCATAACAAAAGGT+TGG | - | chr8_3:63916674-63916693 | None:intergenic | 35.0% | |
GAGCAATAATTTGATTCTGC+TGG | - | chr8_3:63916698-63916717 | None:intergenic | 35.0% | |
! | AGGACGATGAATCTAAAACT+GGG | - | chr8_3:63916887-63916906 | None:intergenic | 35.0% |
! | AAGGACGATGAATCTAAAAC+TGG | - | chr8_3:63916888-63916907 | None:intergenic | 35.0% |
! | TCGTCCTTTAAAAAGGATGT+TGG | + | chr8_3:63916900-63916919 | Msa1301750:CDS | 35.0% |
GGATAGAAACTGTGATCAAA+TGG | + | chr8_3:63916932-63916951 | Msa1301750:CDS | 35.0% | |
GTGTCTTCTAGTAGAAATTC+AGG | + | chr8_3:63916975-63916994 | Msa1301750:CDS | 35.0% | |
AATTCAGGGTTTCTTTCCAT+TGG | + | chr8_3:63916990-63917009 | Msa1301750:CDS | 35.0% | |
CATTGAAAAGACATCTGATG+AGG | + | chr8_3:63917067-63917086 | Msa1301750:CDS | 35.0% | |
!! | TGATTCAGACATTGATGATG+AGG | + | chr8_3:63917163-63917182 | Msa1301750:CDS | 35.0% |
ATCAGGTCATCCAGAATAAA+AGG | - | chr8_3:63917413-63917432 | None:intergenic | 35.0% | |
! | TTTCTAGCAGAAATGGTTCT+TGG | - | chr8_3:63917449-63917468 | None:intergenic | 35.0% |
! | ATGCTTCTTTCTAGCAGAAA+TGG | - | chr8_3:63917456-63917475 | None:intergenic | 35.0% |
! | CTAGAAAGAAGCATGTTTCT+CGG | + | chr8_3:63917462-63917481 | Msa1301750:CDS | 35.0% |
AAAGCCTCCAAAAGAATTCA+TGG | + | chr8_3:63917521-63917540 | Msa1301750:CDS | 35.0% | |
! | AGTCGTACCATGAATTCTTT+TGG | - | chr8_3:63917531-63917550 | None:intergenic | 35.0% |
TATTAATGCAAGGATCTTCG+GGG | - | chr8_3:63917699-63917718 | None:intergenic | 35.0% | |
!!! | AATCCCTTGATTATTTTGGC+TGG | + | chr8_3:63917743-63917762 | Msa1301750:intron | 35.0% |
CATCCAGCCAAAATAATCAA+GGG | - | chr8_3:63917749-63917768 | None:intergenic | 35.0% | |
CTATTATCCTAGTGGTTTGA+TGG | + | chr8_3:63917838-63917857 | Msa1301750:intron | 35.0% | |
ATATGTGTCAGCAAAATGAG+TGG | - | chr8_3:63918099-63918118 | None:intergenic | 35.0% | |
! | TTTTCTCAAGATCAACACCT+CGG | - | chr8_3:63918192-63918211 | None:intergenic | 35.0% |
TCGAGTCAGAGAACTTATAT+GGG | - | chr8_3:63918504-63918523 | None:intergenic | 35.0% | |
ATCGAGTCAGAGAACTTATA+TGG | - | chr8_3:63918505-63918524 | None:intergenic | 35.0% | |
TTTATATCTCTGATGACCCT+TGG | + | chr8_3:63918599-63918618 | Msa1301750:intron | 35.0% | |
GATTTGGGTACATGCATTTA+TGG | + | chr8_3:63918629-63918648 | Msa1301750:intron | 35.0% | |
TACACAAGGTAAACAGAAGT+CGG | - | chr8_3:63919312-63919331 | None:intergenic | 35.0% | |
!!! | ATTTTGACTTGGTGGTATTG+TGG | + | chr8_3:63919498-63919517 | Msa1301750:intron | 35.0% |
TTAAAGGAGTTAAAGGTCCA+GGG | - | chr8_3:63920008-63920027 | None:intergenic | 35.0% | |
TTTAAAGGAGTTAAAGGTCC+AGG | - | chr8_3:63920009-63920028 | None:intergenic | 35.0% | |
TCTCAGTTCTCCATGAATAT+AGG | + | chr8_3:63920186-63920205 | Msa1301750:intron | 35.0% | |
! | ACCTTCTTTTCCCAGAATTT+TGG | - | chr8_3:63920252-63920271 | None:intergenic | 35.0% |
TAATGTCTAGTCTGGATTTG+TGG | + | chr8_3:63920329-63920348 | Msa1301750:intron | 35.0% | |
TTGAAGTTTCAAGGACATTG+GGG | - | chr8_3:63920582-63920601 | None:intergenic | 35.0% | |
AAAATAAGTGTCAAAAGGGG+AGG | + | chr8_3:63920926-63920945 | Msa1301750:intron | 35.0% | |
TTTCGTGAACTTCAGTTGTT+AGG | + | chr8_3:63921138-63921157 | Msa1301750:intron | 35.0% | |
!! | GGAAGTTGATTTTTCTGTCA+TGG | + | chr8_3:63921173-63921192 | Msa1301750:CDS | 35.0% |
!! | CTCACTGATTTCTTGTTCAT+AGG | - | chr8_3:63921201-63921220 | None:intergenic | 35.0% |
AGACAGCAAGAACTTCAATT+TGG | + | chr8_3:63921270-63921289 | Msa1301750:CDS | 35.0% | |
CGTAAAGTGAAGGACAATAA+AGG | + | chr8_3:63921333-63921352 | Msa1301750:CDS | 35.0% | |
AATAAAGGGAGCGAACAAAA+GGG | + | chr8_3:63921348-63921367 | Msa1301750:CDS | 35.0% | |
! | TAACTTGTACAGTTTCTGAG+TGG | - | chr8_3:63921419-63921438 | None:intergenic | 35.0% |
! | GACTGATAGTGCAAATAAGA+AGG | + | chr8_3:63921458-63921477 | Msa1301750:CDS | 35.0% |
!!! | TGCTAATGTTGGTTCTTTTG+AGG | + | chr8_3:63921494-63921513 | Msa1301750:CDS | 35.0% |
ACACCTAAACCAAGTGATTT+CGG | - | chr8_3:63921633-63921652 | None:intergenic | 35.0% | |
ACCAAAAGTTCTTCAAGAGT+TGG | + | chr8_3:63921714-63921733 | Msa1301750:CDS | 35.0% | |
! | ACCAACTCTTGAAGAACTTT+TGG | - | chr8_3:63921718-63921737 | None:intergenic | 35.0% |
!! | TCTTTTGAAAAGCGTACCAA+AGG | + | chr8_3:63921738-63921757 | Msa1301750:CDS | 35.0% |
ACAAAAGGATCTTCAACTTC+AGG | + | chr8_3:63921792-63921811 | Msa1301750:CDS | 35.0% | |
ACAAAAGGATCTTCAACTTC+AGG | + | chr8_3:63921792-63921811 | Msa1301750:CDS | 35.0% | |
! | ATCAAAGATGATGGCAAAGA+TGG | + | chr8_3:63921896-63921915 | Msa1301750:CDS | 35.0% |
! | TCAAAGATGATGGCAAAGAT+GGG | + | chr8_3:63921897-63921916 | Msa1301750:CDS | 35.0% |
TTTGTTGAAGGTTCAGGATT+AGG | + | chr8_3:63921921-63921940 | Msa1301750:CDS | 35.0% | |
! | TTAAGTGTTGTGATCTTACG+TGG | + | chr8_3:63922071-63922090 | Msa1301750:three_prime_UTR | 35.0% |
!! | AAAACTCGGTCCTACTTTTA+TGG | + | chr8_3:63922190-63922209 | Msa1301750:three_prime_UTR | 35.0% |
TACATGTCCTCCATAAAAGT+AGG | - | chr8_3:63922203-63922222 | None:intergenic | 35.0% | |
TTGAATCTGTGACCAACTAT+TGG | + | chr8_3:63922248-63922267 | Msa1301750:three_prime_UTR | 35.0% | |
! | AACCTCTTTTACGGGTTTTC+GGG | - | chr8_3:63915716-63915735 | None:intergenic | 40.0% |
! | GAACCTCTTTTACGGGTTTT+CGG | - | chr8_3:63915717-63915736 | None:intergenic | 40.0% |
! | AGCAACTGAACCTCTTTTAC+GGG | - | chr8_3:63915724-63915743 | None:intergenic | 40.0% |
! | AAGGTGGATTCTTATCCGAT+TGG | + | chr8_3:63915763-63915782 | Msa1301750:CDS | 40.0% |
! | AGGTGGATTCTTATCCGATT+GGG | + | chr8_3:63915764-63915783 | Msa1301750:CDS | 40.0% |
! | GGGCTAATGATTTTGCTTCA+TGG | + | chr8_3:63915924-63915943 | Msa1301750:intron | 40.0% |
AAATCTGGTAGTCTACGTAG+AGG | + | chr8_3:63916039-63916058 | Msa1301750:CDS | 40.0% | |
!! | GAAGCGTCTGGTTCTAAAAA+TGG | + | chr8_3:63916063-63916082 | Msa1301750:CDS | 40.0% |
TGCAAACAAACCTGTACATC+AGG | - | chr8_3:63916135-63916154 | None:intergenic | 40.0% | |
TCGTGTCTGACACAAACTAT+AGG | + | chr8_3:63916322-63916341 | Msa1301750:intron | 40.0% | |
TGCATTTATCGGTGTATACC+AGG | + | chr8_3:63916590-63916609 | Msa1301750:intron | 40.0% | |
ATTGGGAACAACAATGGAGA+TGG | + | chr8_3:63916630-63916649 | Msa1301750:CDS | 40.0% | |
TGGGATTCCACCATAACAAA+AGG | - | chr8_3:63916678-63916697 | None:intergenic | 40.0% | |
TTGGGAGATAGTTCTCATAG+AGG | + | chr8_3:63916786-63916805 | Msa1301750:CDS | 40.0% | |
GATAGTTCTCATAGAGGACT+AGG | + | chr8_3:63916792-63916811 | Msa1301750:CDS | 40.0% | |
!! | ATGATGTGATAGTGCCACTT+GGG | - | chr8_3:63916842-63916861 | None:intergenic | 40.0% |
! | GGACGATGAATCTAAAACTG+GGG | - | chr8_3:63916886-63916905 | None:intergenic | 40.0% |
!! | AAAGGATGTTGGTTCTGATG+AGG | + | chr8_3:63916911-63916930 | Msa1301750:CDS | 40.0% |
CTACTAGAAGACACCTTTGA+TGG | - | chr8_3:63916969-63916988 | None:intergenic | 40.0% | |
GTATAACTTAAGACCGCCAA+TGG | - | chr8_3:63917009-63917028 | None:intergenic | 40.0% | |
CGGTCTTAAGTTATACACAG+AGG | + | chr8_3:63917013-63917032 | Msa1301750:CDS | 40.0% | |
GAAAAGACATCTGATGAGGA+CGG | + | chr8_3:63917071-63917090 | Msa1301750:CDS | 40.0% | |
!! | TCTTCTGAGCAAGAAGTACT+TGG | + | chr8_3:63917101-63917120 | Msa1301750:CDS | 40.0% |
TGAGGTTGCAGAAGATTATC+TGG | + | chr8_3:63917181-63917200 | Msa1301750:CDS | 40.0% | |
GTTGCAGAAGATTATCTGGA+AGG | + | chr8_3:63917185-63917204 | Msa1301750:CDS | 40.0% | |
GAAGATTATCTGGAAGGAGT+TGG | + | chr8_3:63917191-63917210 | Msa1301750:CDS | 40.0% | |
GATGATGATAGTTCTTCCAG+CGG | + | chr8_3:63917272-63917291 | Msa1301750:CDS | 40.0% | |
TTTCATCATGCCATATTCCC+TGG | - | chr8_3:63917351-63917370 | None:intergenic | 40.0% | |
AAAGGAACGTGCTTCTTTAC+AGG | - | chr8_3:63917395-63917414 | None:intergenic | 40.0% | |
! | GAAGCACGTTCCTTTTATTC+TGG | + | chr8_3:63917400-63917419 | Msa1301750:CDS | 40.0% |
TTTCTCGGTTTCCTCATTCT+TGG | + | chr8_3:63917477-63917496 | Msa1301750:CDS | 40.0% | |
! | CGTACCATGAATTCTTTTGG+AGG | - | chr8_3:63917528-63917547 | None:intergenic | 40.0% |
CATTGGATCTTTGACATAGG+TGG | - | chr8_3:63917563-63917582 | None:intergenic | 40.0% | |
CCATCCAGCCAAAATAATCA+AGG | - | chr8_3:63917750-63917769 | None:intergenic | 40.0% | |
!!! | CCTTGATTATTTTGGCTGGA+TGG | + | chr8_3:63917747-63917766 | Msa1301750:intron | 40.0% |
TGCTGACACATATTCTGTAC+AGG | + | chr8_3:63918106-63918125 | Msa1301750:intron | 40.0% | |
! | ACAAGCTTTTCACGAACATC+TGG | + | chr8_3:63918435-63918454 | Msa1301750:intron | 40.0% |
! | AAGTTCTCTGACTCGATGAA+AGG | + | chr8_3:63918508-63918527 | Msa1301750:intron | 40.0% |
ACATATACAGTCGTTGTAGG+AGG | + | chr8_3:63918679-63918698 | Msa1301750:intron | 40.0% | |
! | TTCCTTTTGATGCCTCTCAA+AGG | - | chr8_3:63918711-63918730 | None:intergenic | 40.0% |
ACTCATTCTAATCATGGGAG+TGG | - | chr8_3:63918959-63918978 | None:intergenic | 40.0% | |
CGGACACTCATTCTAATCAT+GGG | - | chr8_3:63918964-63918983 | None:intergenic | 40.0% | |
TCGGACACTCATTCTAATCA+TGG | - | chr8_3:63918965-63918984 | None:intergenic | 40.0% | |
! | CCATACTATTTGGGACAGAA+AGG | - | chr8_3:63919260-63919279 | None:intergenic | 40.0% |
CCTTTCTGTCCCAAATAGTA+TGG | + | chr8_3:63919257-63919276 | Msa1301750:intron | 40.0% | |
CTTCTGTTTACCTTGTGTAC+TGG | + | chr8_3:63919313-63919332 | Msa1301750:intron | 40.0% | |
!!! | AGTCTGGTGGTATTTTGACT+TGG | + | chr8_3:63919487-63919506 | Msa1301750:intron | 40.0% |
! | TGGATCTTAACCCATTGACT+TGG | + | chr8_3:63919518-63919537 | Msa1301750:intron | 40.0% |
!! | GGATCTTAACCCATTGACTT+GGG | + | chr8_3:63919519-63919538 | Msa1301750:intron | 40.0% |
! | TTGGTATTTTCTTCCTTGCC+AGG | + | chr8_3:63919975-63919994 | Msa1301750:intron | 40.0% |
GGAGAACTGAGATCATTACA+GGG | - | chr8_3:63920178-63920197 | None:intergenic | 40.0% | |
TGGAGAACTGAGATCATTAC+AGG | - | chr8_3:63920179-63920198 | None:intergenic | 40.0% | |
CTCCATGAATATAGGTACAG+CGG | + | chr8_3:63920194-63920213 | Msa1301750:intron | 40.0% | |
AACCGCTGTACCTATATTCA+TGG | - | chr8_3:63920199-63920218 | None:intergenic | 40.0% | |
ATGAATATAGGTACAGCGGT+TGG | + | chr8_3:63920198-63920217 | Msa1301750:intron | 40.0% | |
! | GCCAAAATTCTGGGAAAAGA+AGG | + | chr8_3:63920248-63920267 | Msa1301750:CDS | 40.0% |
GGAAGAGTAGGAAAAATGAG+TGG | - | chr8_3:63920558-63920577 | None:intergenic | 40.0% | |
! | TTTTTACAGCTGAGACTGAG+AGG | + | chr8_3:63920726-63920745 | Msa1301750:intron | 40.0% |
! | TAGTCAGAGTCCGTTTGTTA+CGG | - | chr8_3:63921118-63921137 | None:intergenic | 40.0% |
!! | GTTGTTAGGAGTTGATGAAG+AGG | + | chr8_3:63921152-63921171 | Msa1301750:intron | 40.0% |
CAATAAAGGGAGCGAACAAA+AGG | + | chr8_3:63921347-63921366 | Msa1301750:CDS | 40.0% | |
!! | CCAGTGTCATTTGTATCAAG+CGG | + | chr8_3:63921387-63921406 | Msa1301750:CDS | 40.0% |
!!! | TCTTTTGAGGTACACACTAC+TGG | + | chr8_3:63921507-63921526 | Msa1301750:CDS | 40.0% |
GCTAAAATGGGATACACTGA+AGG | + | chr8_3:63921549-63921568 | Msa1301750:CDS | 40.0% | |
AAAATGGGATACACTGAAGG+AGG | + | chr8_3:63921552-63921571 | Msa1301750:CDS | 40.0% | |
AAATGGGATACACTGAAGGA+GGG | + | chr8_3:63921553-63921572 | Msa1301750:CDS | 40.0% | |
GGGAAAAAATGGTCAAGGTA+TGG | + | chr8_3:63921581-63921600 | Msa1301750:CDS | 40.0% | |
GAAATCACTTGGTTTAGGTG+TGG | + | chr8_3:63921632-63921651 | Msa1301750:CDS | 40.0% | |
!! | CAATGTTGATGATCCAGCAA+GGG | + | chr8_3:63921665-63921684 | Msa1301750:CDS | 40.0% |
ACCAAAGGCTCTTCAAGTAT+TGG | + | chr8_3:63921753-63921772 | Msa1301750:CDS | 40.0% | |
ACCAATACTTGAAGAGCCTT+TGG | - | chr8_3:63921757-63921776 | None:intergenic | 40.0% | |
GGATCTTCAACTTCAGGTAT+TGG | + | chr8_3:63921798-63921817 | Msa1301750:CDS | 40.0% | |
GGATCTTCAACTTCAGGTAT+TGG | + | chr8_3:63921798-63921817 | Msa1301750:CDS | 40.0% | |
!!! | GGGTTTTGGATCAAAGATGA+TGG | + | chr8_3:63921887-63921906 | Msa1301750:CDS | 40.0% |
!! | GCAAAGATGGGATTTGTTGA+AGG | + | chr8_3:63921909-63921928 | Msa1301750:CDS | 40.0% |
!! | ATGGGATTTGTTGAAGGTTC+AGG | + | chr8_3:63921915-63921934 | Msa1301750:CDS | 40.0% |
GGATTAGGTAGAGAATCACA+AGG | + | chr8_3:63921936-63921955 | Msa1301750:CDS | 40.0% | |
! | ACAAGGTATTACTGCTCCAT+TGG | + | chr8_3:63921953-63921972 | Msa1301750:CDS | 40.0% |
! | CAAGGTATTACTGCTCCATT+GGG | + | chr8_3:63921954-63921973 | Msa1301750:CDS | 40.0% |
GTCACAGATTCAATGTAGCA+GGG | - | chr8_3:63922241-63922260 | None:intergenic | 40.0% | |
TGATACTGAAGCTGTACCAA+CGG | + | chr8_3:63922300-63922319 | Msa1301750:three_prime_UTR | 40.0% | |
TTGGAAGCAAAAATGGGAGG+TGG | + | chr8_3:63915633-63915652 | Msa1301750:exon | 45.0% | |
AGTAGAAGAGGAAGAGGTAG+AGG | + | chr8_3:63915657-63915676 | Msa1301750:CDS | 45.0% | |
AACCCGAAAACCCGTAAAAG+AGG | + | chr8_3:63915711-63915730 | Msa1301750:CDS | 45.0% | |
!!! | AGAGAAGCACTTTTCGTCGA+AGG | + | chr8_3:63915744-63915763 | Msa1301750:CDS | 45.0% |
! | GGTGGATTCTTATCCGATTG+GGG | + | chr8_3:63915765-63915784 | Msa1301750:CDS | 45.0% |
GAATTGCGATTGGAAGAGGA+AGG | - | chr8_3:63915792-63915811 | None:intergenic | 45.0% | |
TCCTCTTCCAATCGCAATTC+AGG | + | chr8_3:63915792-63915811 | Msa1301750:CDS | 45.0% | |
ACCTGAATTGCGATTGGAAG+AGG | - | chr8_3:63915796-63915815 | None:intergenic | 45.0% | |
GATGGAACCTGAATTGCGAT+TGG | - | chr8_3:63915802-63915821 | None:intergenic | 45.0% | |
TGGATTGCAGGTAGAAATGG+TGG | + | chr8_3:63916006-63916025 | Msa1301750:intron | 45.0% | |
GTGTGCGCTTAAATGTTCGA+AGG | - | chr8_3:63916288-63916307 | None:intergenic | 45.0% | |
!! | ACACTGTTCTGCTTTGAAGG+AGG | - | chr8_3:63916735-63916754 | None:intergenic | 45.0% |
TCCTTCAAAGCAGAACAGTG+TGG | + | chr8_3:63916734-63916753 | Msa1301750:CDS | 45.0% | |
TCCACACTGTTCTGCTTTGA+AGG | - | chr8_3:63916738-63916757 | None:intergenic | 45.0% | |
!! | TGATGTGATAGTGCCACTTG+GGG | - | chr8_3:63916841-63916860 | None:intergenic | 45.0% |
! | GATGATGTGATAGTGCCACT+TGG | - | chr8_3:63916843-63916862 | None:intergenic | 45.0% |
GGAAGAAGACTTGCCATCAA+AGG | + | chr8_3:63916953-63916972 | Msa1301750:CDS | 45.0% | |
TCAGGGTTTCTTTCCATTGG+CGG | + | chr8_3:63916993-63917012 | Msa1301750:CDS | 45.0% | |
GATTATCTGGAAGGAGTTGG+TGG | + | chr8_3:63917194-63917213 | Msa1301750:CDS | 45.0% | |
TTTACAGGTCTTTGCCTCCA+TGG | - | chr8_3:63917380-63917399 | None:intergenic | 45.0% | |
!! | TTGGATCCTTTTCGAGCATC+AGG | - | chr8_3:63917430-63917449 | None:intergenic | 45.0% |
TTGCTCTTCTGAGCATGTGA+AGG | - | chr8_3:63917503-63917522 | None:intergenic | 45.0% | |
GCTGGATGGTTGAAATAGCA+GGG | + | chr8_3:63917761-63917780 | Msa1301750:intron | 45.0% | |
ATAGCAGGGCTGGAAAAAAC+TGG | + | chr8_3:63917775-63917794 | Msa1301750:intron | 45.0% | |
AGCTCATCCATCAAACCACT+AGG | - | chr8_3:63917848-63917867 | None:intergenic | 45.0% | |
GTGTCAGCAAAATGAGTGGT+TGG | - | chr8_3:63918095-63918114 | None:intergenic | 45.0% | |
TGGGTACATGCATTTATGGC+AGG | + | chr8_3:63918633-63918652 | Msa1301750:intron | 45.0% | |
!! | TGCCTTTGAGAGGCATCAAA+AGG | + | chr8_3:63918706-63918725 | Msa1301750:intron | 45.0% |
GTTACCATGCTTGACTCAGT+TGG | + | chr8_3:63919113-63919132 | Msa1301750:intron | 45.0% | |
AACTCCAACTGAGTCAAGCA+TGG | - | chr8_3:63919120-63919139 | None:intergenic | 45.0% | |
GAGCAATCTCGAGAATGCAT+AGG | - | chr8_3:63919225-63919244 | None:intergenic | 45.0% | |
AGAACAGAAGCCAGTACACA+AGG | - | chr8_3:63919326-63919345 | None:intergenic | 45.0% | |
ATTGTGGATACCAACCCACT+TGG | + | chr8_3:63919461-63919480 | Msa1301750:intron | 45.0% | |
TTGTGGATACCAACCCACTT+GGG | + | chr8_3:63919462-63919481 | Msa1301750:intron | 45.0% | |
!!! | CTGGTGGTATTTTGACTTGG+TGG | + | chr8_3:63919490-63919509 | Msa1301750:intron | 45.0% |
!! | TAACCCATTGACTTGGGTCT+TGG | + | chr8_3:63919525-63919544 | Msa1301750:intron | 45.0% |
!! | AACCCATTGACTTGGGTCTT+GGG | + | chr8_3:63919526-63919545 | Msa1301750:intron | 45.0% |
! | GCTCTGTTTCTTTCACAACC+AGG | + | chr8_3:63919853-63919872 | Msa1301750:intron | 45.0% |
GATGCGAGCTAAGGGTTTAA+AGG | - | chr8_3:63920024-63920043 | None:intergenic | 45.0% | |
TGCAATGCTACAATGCAGTG+GGG | - | chr8_3:63920048-63920067 | None:intergenic | 45.0% | |
CTGCAATGCTACAATGCAGT+GGG | - | chr8_3:63920049-63920068 | None:intergenic | 45.0% | |
ACTGCAATGCTACAATGCAG+TGG | - | chr8_3:63920050-63920069 | None:intergenic | 45.0% | |
TGGCAGGAGTTTATCAGTTG+CGG | + | chr8_3:63920218-63920237 | Msa1301750:CDS | 45.0% | |
GGAGTAGCAGCCAAAATTCT+GGG | + | chr8_3:63920239-63920258 | Msa1301750:CDS | 45.0% | |
TCAGATTTGTGACCGTGATG+CGG | + | chr8_3:63920354-63920373 | Msa1301750:intron | 45.0% | |
TGTAGAATGTGTCCGCATCA+CGG | - | chr8_3:63920369-63920388 | None:intergenic | 45.0% | |
! | CACAGAACAGAACCTTTTCC+AGG | - | chr8_3:63920421-63920440 | None:intergenic | 45.0% |
CTGGAAAAGGTTCTGTTCTG+TGG | + | chr8_3:63920419-63920438 | Msa1301750:intron | 45.0% | |
CTCTGTATCTCAAGCCTCAA+GGG | - | chr8_3:63920524-63920543 | None:intergenic | 45.0% | |
ACTCTGTATCTCAAGCCTCA+AGG | - | chr8_3:63920525-63920544 | None:intergenic | 45.0% | |
TTGAGGCTTGAGATACAGAG+TGG | + | chr8_3:63920524-63920543 | Msa1301750:intron | 45.0% | |
AAGTTTCAAGGACATTGGGG+TGG | - | chr8_3:63920579-63920598 | None:intergenic | 45.0% | |
! | AGTCAGAGTCCGTTTGTTAC+GGG | - | chr8_3:63921117-63921136 | None:intergenic | 45.0% |
AACTTCAATTTGGCCAGAGC+AGG | + | chr8_3:63921280-63921299 | Msa1301750:CDS | 45.0% | |
CAGAGACAGACGTAAAGTGA+AGG | + | chr8_3:63921323-63921342 | Msa1301750:CDS | 45.0% | |
CCGCTTGATACAAATGACAC+TGG | - | chr8_3:63921390-63921409 | None:intergenic | 45.0% | |
AGAACCAACATTAGCAGAGC+TGG | - | chr8_3:63921490-63921509 | None:intergenic | 45.0% | |
!!! | GAGGTACACACTACTGGTTT+TGG | + | chr8_3:63921513-63921532 | Msa1301750:CDS | 45.0% |
AATGGGATACACTGAAGGAG+GGG | + | chr8_3:63921554-63921573 | Msa1301750:CDS | 45.0% | |
GGGTTGGGAAAAAATGGTCA+AGG | + | chr8_3:63921576-63921595 | Msa1301750:CDS | 45.0% | |
AGCCCATTGAGGTTATCCAA+AGG | + | chr8_3:63921607-63921626 | Msa1301750:CDS | 45.0% | |
GGCCTTTGGATAACCTCAAT+GGG | - | chr8_3:63921612-63921631 | None:intergenic | 45.0% | |
ATCCAAAGGCCGAAATCACT+TGG | + | chr8_3:63921621-63921640 | Msa1301750:CDS | 45.0% | |
AACCAAGTGATTTCGGCCTT+TGG | - | chr8_3:63921626-63921645 | None:intergenic | 45.0% | |
AGGCCGAAATCACTTGGTTT+AGG | + | chr8_3:63921627-63921646 | Msa1301750:CDS | 45.0% | |
!! | GCAATGTTGATGATCCAGCA+AGG | + | chr8_3:63921664-63921683 | Msa1301750:CDS | 45.0% |
TTACCAAAGTCACGAGGACT+GGG | + | chr8_3:63921987-63922006 | Msa1301750:CDS | 45.0% | |
GTGGTAATTCATCGTTACCG+TGG | + | chr8_3:63922090-63922109 | Msa1301750:three_prime_UTR | 45.0% | |
!! | ACTCGGTCCTACTTTTATGG+AGG | + | chr8_3:63922193-63922212 | Msa1301750:three_prime_UTR | 45.0% |
GGTCACAGATTCAATGTAGC+AGG | - | chr8_3:63922242-63922261 | None:intergenic | 45.0% | |
CCACGAGTTCATCCAATAGT+TGG | - | chr8_3:63922263-63922282 | None:intergenic | 45.0% | |
CCAACTATTGGATGAACTCG+TGG | + | chr8_3:63922260-63922279 | Msa1301750:three_prime_UTR | 45.0% | |
!!! | ATTAAATAAAGTTTTTATAT+TGG | + | chr8_3:63919760-63919779 | Msa1301750:intron | 5.0% |
!!! | TAAAAAAAATGATTTTTATT+AGG | + | chr8_3:63921009-63921028 | Msa1301750:intron | 5.0% |
ATGGGAGGTGGAAGTAGAAG+AGG | + | chr8_3:63915645-63915664 | Msa1301750:CDS | 50.0% | |
GGTGGAAGTAGAAGAGGAAG+AGG | + | chr8_3:63915651-63915670 | Msa1301750:CDS | 50.0% | |
AGAGGAAGATCCAACACGAG+CGG | + | chr8_3:63915675-63915694 | Msa1301750:CDS | 50.0% | |
!! | GAAGCACTTTTCGTCGAAGG+TGG | + | chr8_3:63915747-63915766 | Msa1301750:CDS | 50.0% |
GGTGGGATTGGGAACAACAA+TGG | + | chr8_3:63916624-63916643 | Msa1301750:CDS | 50.0% | |
! | GCTGCGCCAACCTTTTGTTA+TGG | + | chr8_3:63916665-63916684 | Msa1301750:CDS | 50.0% |
!! | GCGCCAACCTTTTGTTATGG+TGG | + | chr8_3:63916668-63916687 | Msa1301750:CDS | 50.0% |
GGGTTTCGTCATGTTCAGCA+TGG | - | chr8_3:63916821-63916840 | None:intergenic | 50.0% | |
GAACATGACGAAACCCCAAG+TGG | + | chr8_3:63916825-63916844 | Msa1301750:CDS | 50.0% | |
ATGGTTGCTAGACCCTGTTG+TGG | + | chr8_3:63917241-63917260 | Msa1301750:CDS | 50.0% | |
! | CATCTGACTCGTCCACAACA+GGG | - | chr8_3:63917256-63917275 | None:intergenic | 50.0% |
! | TCATCTGACTCGTCCACAAC+AGG | - | chr8_3:63917257-63917276 | None:intergenic | 50.0% |
AGTTCTTCCAGCGGTAGCTA+TGG | + | chr8_3:63917281-63917300 | Msa1301750:CDS | 50.0% | |
!! | TGGTGAGGCTTTGGAGAAGT+TGG | + | chr8_3:63917301-63917320 | Msa1301750:CDS | 50.0% |
!! | GGTGAGGCTTTGGAGAAGTT+GGG | + | chr8_3:63917302-63917321 | Msa1301750:CDS | 50.0% |
CATCATGCCATATTCCCTGG+AGG | - | chr8_3:63917348-63917367 | None:intergenic | 50.0% | |
GCATGATGAAAGCCCAACCA+TGG | + | chr8_3:63917360-63917379 | Msa1301750:CDS | 50.0% | |
TGATGAAAGCCCAACCATGG+AGG | + | chr8_3:63917363-63917382 | Msa1301750:CDS | 50.0% | |
AGGTCTTTGCCTCCATGGTT+GGG | - | chr8_3:63917375-63917394 | None:intergenic | 50.0% | |
GGATGACCTGATGCTCGAAA+AGG | + | chr8_3:63917421-63917440 | Msa1301750:CDS | 50.0% | |
GCATGTGAAGGCCAAGAATG+AGG | - | chr8_3:63917491-63917510 | None:intergenic | 50.0% | |
GGCTGGATGGTTGAAATAGC+AGG | + | chr8_3:63917760-63917779 | Msa1301750:intron | 50.0% | |
GATGGTTGAAATAGCAGGGC+TGG | + | chr8_3:63917765-63917784 | Msa1301750:intron | 50.0% | |
ACTGTGTGTGAGCATGAGCA+GGG | - | chr8_3:63918064-63918083 | None:intergenic | 50.0% | |
TACTGTGTGTGAGCATGAGC+AGG | - | chr8_3:63918065-63918084 | None:intergenic | 50.0% | |
GCTCATGCTCACACACAGTA+TGG | + | chr8_3:63918065-63918084 | Msa1301750:intron | 50.0% | |
AGAGAGAGAATGCAACACCG+AGG | + | chr8_3:63918172-63918191 | Msa1301750:CDS | 50.0% | |
TCTGATGACCCTTGGAGTGT+GGG | + | chr8_3:63918607-63918626 | Msa1301750:intron | 50.0% | |
ACCCTTGGAGTGTGGGATTT+GGG | + | chr8_3:63918614-63918633 | Msa1301750:intron | 50.0% | |
ACCCAAATCCCACACTCCAA+GGG | - | chr8_3:63918618-63918637 | None:intergenic | 50.0% | |
TACCCAAATCCCACACTCCA+AGG | - | chr8_3:63918619-63918638 | None:intergenic | 50.0% | |
! | AGGAGGCATATGCCTTTGAG+AGG | + | chr8_3:63918696-63918715 | Msa1301750:intron | 50.0% |
GCATTCTCGAGATTGCTCAC+AGG | + | chr8_3:63919227-63919246 | Msa1301750:CDS | 50.0% | |
ACCACCAGACTAACCCAAGT+GGG | - | chr8_3:63919478-63919497 | None:intergenic | 50.0% | |
TACCACCAGACTAACCCAAG+TGG | - | chr8_3:63919479-63919498 | None:intergenic | 50.0% | |
CTCCCAAGACCCAAGTCAAT+GGG | - | chr8_3:63919531-63919550 | None:intergenic | 50.0% | |
ACTCCCAAGACCCAAGTCAA+TGG | - | chr8_3:63919532-63919551 | None:intergenic | 50.0% | |
GAATCGAACCTGAGACCTTG+AGG | - | chr8_3:63919563-63919582 | None:intergenic | 50.0% | |
GTCTCAGGTTCGATTCTCTC+CGG | + | chr8_3:63919567-63919586 | Msa1301750:intron | 50.0% | |
CAATGCTACAATGCAGTGGG+GGG | - | chr8_3:63920046-63920065 | None:intergenic | 50.0% | |
GCAATGCTACAATGCAGTGG+GGG | - | chr8_3:63920047-63920066 | None:intergenic | 50.0% | |
! | TCAACTGTTCTGAGCAGCGT+TGG | + | chr8_3:63920152-63920171 | Msa1301750:intron | 50.0% |
ATATAGGTACAGCGGTTGGC+AGG | + | chr8_3:63920202-63920221 | Msa1301750:intron | 50.0% | |
CGGAGTAGCAGCCAAAATTC+TGG | + | chr8_3:63920238-63920257 | Msa1301750:CDS | 50.0% | |
ACATCGATGCCATCTGCAAG+TGG | + | chr8_3:63920386-63920405 | Msa1301750:CDS | 50.0% | |
!! | AGTTCTTTGGTGTCCTGCTC+TGG | - | chr8_3:63921296-63921315 | None:intergenic | 50.0% |
! | TCTCTGCTGGCTGAGTTCTT+TGG | - | chr8_3:63921309-63921328 | None:intergenic | 50.0% |
CACTTTACGTCTGTCTCTGC+TGG | - | chr8_3:63921322-63921341 | None:intergenic | 50.0% | |
ACCAACATTAGCAGAGCTGG+TGG | - | chr8_3:63921487-63921506 | None:intergenic | 50.0% | |
ATGGGATACACTGAAGGAGG+GGG | + | chr8_3:63921555-63921574 | Msa1301750:CDS | 50.0% | |
CGGCCTTTGGATAACCTCAA+TGG | - | chr8_3:63921613-63921632 | None:intergenic | 50.0% | |
GATCCAGCAAGGGACAGTAT+CGG | + | chr8_3:63921675-63921694 | Msa1301750:CDS | 50.0% | |
GTTCGGTTACCAAAGTCACG+AGG | + | chr8_3:63921981-63922000 | Msa1301750:CDS | 50.0% | |
GTTACCAAAGTCACGAGGAC+TGG | + | chr8_3:63921986-63922005 | Msa1301750:CDS | 50.0% | |
AGATCCAACACGAGCGGAAG+CGG | + | chr8_3:63915681-63915700 | Msa1301750:CDS | 55.0% | |
GGAAGAGGAAGGACCCCAAT+CGG | - | chr8_3:63915781-63915800 | None:intergenic | 55.0% | |
!! | CTACGTAGAGGAGAAGCGTC+TGG | + | chr8_3:63916051-63916070 | Msa1301750:CDS | 55.0% |
GTATACCAGGAAGTCTCGCG+TGG | + | chr8_3:63916603-63916622 | Msa1301750:intron | 55.0% | |
! | AAGTCTCGCGTGGTGGGATT+GGG | + | chr8_3:63916613-63916632 | Msa1301750:CDS | 55.0% |
TTCCAGCGGTAGCTATGGTG+AGG | + | chr8_3:63917286-63917305 | Msa1301750:CDS | 55.0% | |
CGGTAGCTATGGTGAGGCTT+TGG | + | chr8_3:63917292-63917311 | Msa1301750:CDS | 55.0% | |
!! | GAGGCTTTGGAGAAGTTGGG+TGG | + | chr8_3:63917305-63917324 | Msa1301750:CDS | 55.0% |
TATCCCTTCAAGACGCCTCC+AGG | + | chr8_3:63917330-63917349 | Msa1301750:CDS | 55.0% | |
ATCCCTTCAAGACGCCTCCA+GGG | + | chr8_3:63917331-63917350 | Msa1301750:CDS | 55.0% | |
!! | TTCCCTGGAGGCGTCTTGAA+GGG | - | chr8_3:63917336-63917355 | None:intergenic | 55.0% |
!! | ATTCCCTGGAGGCGTCTTGA+AGG | - | chr8_3:63917337-63917356 | None:intergenic | 55.0% |
CAAGACGCCTCCAGGGAATA+TGG | + | chr8_3:63917338-63917357 | Msa1301750:CDS | 55.0% | |
CAGGTCTTTGCCTCCATGGT+TGG | - | chr8_3:63917376-63917395 | None:intergenic | 55.0% | |
CTGTGTGTGAGCATGAGCAG+GGG | - | chr8_3:63918063-63918082 | None:intergenic | 55.0% | |
CTCTGATGACCCTTGGAGTG+TGG | + | chr8_3:63918606-63918625 | Msa1301750:intron | 55.0% | |
GACCCTTGGAGTGTGGGATT+TGG | + | chr8_3:63918613-63918632 | Msa1301750:intron | 55.0% | |
CCAGACTAACCCAAGTGGGT+TGG | - | chr8_3:63919474-63919493 | None:intergenic | 55.0% | |
!! | CCAACCCACTTGGGTTAGTC+TGG | + | chr8_3:63919471-63919490 | Msa1301750:intron | 55.0% |
!! | ACCCACTTGGGTTAGTCTGG+TGG | + | chr8_3:63919474-63919493 | Msa1301750:intron | 55.0% |
TCGAACCTGAGACCTTGAGG+AGG | - | chr8_3:63919560-63919579 | None:intergenic | 55.0% | |
AAGGTCCAGGGTTCGAATCC+TGG | - | chr8_3:63919996-63920015 | None:intergenic | 55.0% | |
CGCTGTCTACCACTTGCAGA+TGG | - | chr8_3:63920398-63920417 | None:intergenic | 55.0% | |
TGGTAGACAGCGCCTGGAAA+AGG | + | chr8_3:63920406-63920425 | Msa1301750:CDS | 55.0% | |
AGGGCAGTGATGAAACCCAG+AGG | - | chr8_3:63920505-63920524 | None:intergenic | 55.0% | |
GGGTTTCATCACTGCCCTTG+AGG | + | chr8_3:63920507-63920526 | Msa1301750:intron | 55.0% | |
GGACATTGGGGTGGAAGAGT+AGG | - | chr8_3:63920570-63920589 | None:intergenic | 55.0% | |
GCCACCAGCTCTGCTAATGT+TGG | + | chr8_3:63921483-63921502 | Msa1301750:CDS | 55.0% | |
TGGGATACACTGAAGGAGGG+GGG | + | chr8_3:63921556-63921575 | Msa1301750:CDS | 55.0% | |
ATACACTGAAGGAGGGGGGT+TGG | + | chr8_3:63921560-63921579 | Msa1301750:CDS | 55.0% | |
TACACTGAAGGAGGGGGGTT+GGG | + | chr8_3:63921561-63921580 | Msa1301750:CDS | 55.0% | |
GGAGGGGGGTTGGGAAAAAA+TGG | + | chr8_3:63921570-63921589 | Msa1301750:CDS | 55.0% | |
AGGTATGGCTCAGCCCATTG+AGG | + | chr8_3:63921596-63921615 | Msa1301750:CDS | 55.0% | |
! | GTACCGATACTGTCCCTTGC+TGG | - | chr8_3:63921681-63921700 | None:intergenic | 55.0% |
ACTACCGCTTCCGCTCGTGT+TGG | - | chr8_3:63915688-63915707 | None:intergenic | 60.0% | |
AACACGAGCGGAAGCGGTAG+TGG | + | chr8_3:63915687-63915706 | Msa1301750:CDS | 60.0% | |
TACCAGGAAGTCTCGCGTGG+TGG | + | chr8_3:63916606-63916625 | Msa1301750:intron | 60.0% | |
ACCAGGAAGTCTCGCGTGGT+GGG | + | chr8_3:63916607-63916626 | Msa1301750:intron | 60.0% | |
! | GAAGTCTCGCGTGGTGGGAT+TGG | + | chr8_3:63916612-63916631 | Msa1301750:CDS | 60.0% |
AGCCTCACCATAGCTACCGC+TGG | - | chr8_3:63917291-63917310 | None:intergenic | 60.0% | |
! | TGGGAGTGTGCTCCTCCTCA+AGG | + | chr8_3:63919545-63919564 | Msa1301750:intron | 60.0% |
GTGCTCCTCCTCAAGGTCTC+AGG | + | chr8_3:63919552-63919571 | Msa1301750:intron | 60.0% | |
CCAGGGTTCGAATCCTGGCA+AGG | - | chr8_3:63919991-63920010 | None:intergenic | 60.0% | |
CCTTGCCAGGATTCGAACCC+TGG | + | chr8_3:63919988-63920007 | Msa1301750:intron | 60.0% | |
AGTGGGGGGATGCGAGCTAA+GGG | - | chr8_3:63920032-63920051 | None:intergenic | 60.0% | |
TGCAAGTGGTAGACAGCGCC+TGG | + | chr8_3:63920400-63920419 | Msa1301750:CDS | 60.0% | |
! | CTGCTCCATTGGGCGCTGTT+CGG | + | chr8_3:63921964-63921983 | Msa1301750:CDS | 60.0% |
GGTAACCGAACAGCGCCCAA+TGG | - | chr8_3:63921972-63921991 | None:intergenic | 60.0% | |
TCCCACCACGCGAGACTTCC+TGG | - | chr8_3:63916611-63916630 | None:intergenic | 65.0% | |
CAGTGGGGGGATGCGAGCTA+AGG | - | chr8_3:63920033-63920052 | None:intergenic | 65.0% | |
GCGCCCAGTCCTCGTGACTT+TGG | - | chr8_3:63921993-63922012 | None:intergenic | 65.0% | |
TCACGAGGACTGGGCGCCAA+AGG | + | chr8_3:63921996-63922015 | Msa1301750:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_3 | gene | 63915600 | 63922327 | 63915600 | ID=Msa1301750;Name=Msa1301750 |
chr8_3 | mRNA | 63915600 | 63922327 | 63915600 | ID=Msa1301750-mRNA-1;Parent=Msa1301750;Name=Msa1301750-mRNA-1;_AED=0.03;_eAED=0.03;_QI=45|1|1|1|1|1|8|305|798 |
chr8_3 | exon | 63915600 | 63915813 | 63915600 | ID=Msa1301750-mRNA-1:exon:19176;Parent=Msa1301750-mRNA-1 |
chr8_3 | exon | 63916016 | 63916143 | 63916016 | ID=Msa1301750-mRNA-1:exon:19177;Parent=Msa1301750-mRNA-1 |
chr8_3 | exon | 63916612 | 63917542 | 63916612 | ID=Msa1301750-mRNA-1:exon:19178;Parent=Msa1301750-mRNA-1 |
chr8_3 | exon | 63918128 | 63918219 | 63918128 | ID=Msa1301750-mRNA-1:exon:19179;Parent=Msa1301750-mRNA-1 |
chr8_3 | exon | 63919174 | 63919248 | 63919174 | ID=Msa1301750-mRNA-1:exon:19180;Parent=Msa1301750-mRNA-1 |
chr8_3 | exon | 63920208 | 63920269 | 63920208 | ID=Msa1301750-mRNA-1:exon:19181;Parent=Msa1301750-mRNA-1 |
chr8_3 | exon | 63920358 | 63920427 | 63920358 | ID=Msa1301750-mRNA-1:exon:19182;Parent=Msa1301750-mRNA-1 |
chr8_3 | exon | 63921153 | 63922327 | 63921153 | ID=Msa1301750-mRNA-1:exon:19183;Parent=Msa1301750-mRNA-1 |
chr8_3 | five_prime_UTR | 63915600 | 63915644 | 63915600 | ID=Msa1301750-mRNA-1:five_prime_utr;Parent=Msa1301750-mRNA-1 |
chr8_3 | CDS | 63915645 | 63915813 | 63915645 | ID=Msa1301750-mRNA-1:cds;Parent=Msa1301750-mRNA-1 |
chr8_3 | CDS | 63916016 | 63916143 | 63916016 | ID=Msa1301750-mRNA-1:cds;Parent=Msa1301750-mRNA-1 |
chr8_3 | CDS | 63916612 | 63917542 | 63916612 | ID=Msa1301750-mRNA-1:cds;Parent=Msa1301750-mRNA-1 |
chr8_3 | CDS | 63918128 | 63918219 | 63918128 | ID=Msa1301750-mRNA-1:cds;Parent=Msa1301750-mRNA-1 |
chr8_3 | CDS | 63919174 | 63919248 | 63919174 | ID=Msa1301750-mRNA-1:cds;Parent=Msa1301750-mRNA-1 |
chr8_3 | CDS | 63920208 | 63920269 | 63920208 | ID=Msa1301750-mRNA-1:cds;Parent=Msa1301750-mRNA-1 |
chr8_3 | CDS | 63920358 | 63920427 | 63920358 | ID=Msa1301750-mRNA-1:cds;Parent=Msa1301750-mRNA-1 |
chr8_3 | CDS | 63921153 | 63922022 | 63921153 | ID=Msa1301750-mRNA-1:cds;Parent=Msa1301750-mRNA-1 |
chr8_3 | three_prime_UTR | 63922023 | 63922327 | 63922023 | ID=Msa1301750-mRNA-1:three_prime_utr;Parent=Msa1301750-mRNA-1 |
Gene Sequence |
Protein sequence |