Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0724150 | XP_003613477.1 | 93.151 | 219 | 10 | 1 | 1 | 219 | 1 | 214 | 8.17e-133 | 382 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0724150 | G7K703 | 93.151 | 219 | 10 | 1 | 1 | 219 | 1 | 214 | 3.90e-133 | 382 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006880 | Msa0724150 | 0.828099 | 1.085114e-54 | -8.615850e-47 |
| Msa0008410 | Msa0724150 | 0.820281 | 7.451526e-53 | -8.615850e-47 |
| Msa0015680 | Msa0724150 | 0.810775 | 9.749339e-51 | -8.615850e-47 |
| Msa0024480 | Msa0724150 | 0.809188 | 2.140278e-50 | -8.615850e-47 |
| Msa0026660 | Msa0724150 | 0.811783 | 5.890084e-51 | -8.615850e-47 |
| Msa0033880 | Msa0724150 | 0.830786 | 2.413373e-55 | -8.615850e-47 |
| Msa0055100 | Msa0724150 | 0.805626 | 1.218792e-49 | -8.615850e-47 |
| Msa0055150 | Msa0724150 | 0.809722 | 1.644536e-50 | -8.615850e-47 |
| Msa0057140 | Msa0724150 | 0.818940 | 1.508124e-52 | -8.615850e-47 |
| Msa0068000 | Msa0724150 | 0.808753 | 2.652042e-50 | -8.615850e-47 |
| Msa0077010 | Msa0724150 | 0.800972 | 1.121562e-48 | -8.615850e-47 |
| Msa0097950 | Msa0724150 | 0.803369 | 3.603203e-49 | -8.615850e-47 |
| Msa0098740 | Msa0724150 | 0.803206 | 3.893697e-49 | -8.615850e-47 |
| Msa0108870 | Msa0724150 | 0.815453 | 9.173175e-52 | -8.615850e-47 |
| Msa0115500 | Msa0724150 | 0.801491 | 8.782999e-49 | -8.615850e-47 |
| Msa0609000 | Msa0724150 | 0.804868 | 1.756627e-49 | -8.615850e-47 |
| Msa0626680 | Msa0724150 | 0.806296 | 8.814300e-50 | -8.615850e-47 |
| Msa0628290 | Msa0724150 | 0.833893 | 4.104319e-56 | -8.615850e-47 |
| Msa0633570 | Msa0724150 | 0.808988 | 2.363200e-50 | -8.615850e-47 |
| Msa0641140 | Msa0724150 | 0.804751 | 1.858600e-49 | -8.615850e-47 |
| Msa0647930 | Msa0724150 | 0.801880 | 7.305941e-49 | -8.615850e-47 |
| Msa0651150 | Msa0724150 | 0.812012 | 5.250922e-51 | -8.615850e-47 |
| Msa0652300 | Msa0724150 | 0.800075 | 1.708809e-48 | -8.615850e-47 |
| Msa0661090 | Msa0724150 | 0.808158 | 3.553857e-50 | -8.615850e-47 |
| Msa0687230 | Msa0724150 | 0.805405 | 1.356380e-49 | -8.615850e-47 |
| Msa0704800 | Msa0724150 | 0.804433 | 2.165375e-49 | -8.615850e-47 |
| Msa0705000 | Msa0724150 | 0.812539 | 4.030150e-51 | -8.615850e-47 |
| Msa0705040 | Msa0724150 | 0.807132 | 5.867656e-50 | -8.615850e-47 |
| Msa0724150 | Msa0735310 | 0.821904 | 3.150949e-53 | -8.615850e-47 |
| Msa0724150 | Msa0744090 | 0.823836 | 1.117720e-53 | -8.615850e-47 |
| Msa0724150 | Msa0744100 | 0.811005 | 8.691893e-51 | -8.615850e-47 |
| Msa0724150 | Msa0756930 | 0.803371 | 3.598856e-49 | -8.615850e-47 |
| Msa0724150 | Msa0781270 | 0.812441 | 4.232644e-51 | -8.615850e-47 |
| Msa0724150 | Msa0814250 | 0.813570 | 2.393952e-51 | -8.615850e-47 |
| Msa0724150 | Msa0814320 | 0.804728 | 1.879547e-49 | -8.615850e-47 |
| Msa0724150 | Msa0825270 | 0.827632 | 1.405034e-54 | -8.615850e-47 |
| Msa0724150 | Msa0825280 | 0.813946 | 1.978596e-51 | -8.615850e-47 |
| Msa0724150 | Msa0828680 | 0.811530 | 6.685973e-51 | -8.615850e-47 |
| Msa0724150 | Msa0836500 | 0.811927 | 5.479105e-51 | -8.615850e-47 |
| Msa0724150 | Msa0839200 | 0.802365 | 5.808667e-49 | -8.615850e-47 |
| Msa0724150 | Msa0851470 | 0.820834 | 5.562487e-53 | -8.615850e-47 |
| Msa0724150 | Msa0881580 | 0.801744 | 7.794065e-49 | -8.615850e-47 |
| Msa0724150 | Msa0888940 | 0.838648 | 2.538873e-57 | -8.615850e-47 |
| Msa0724150 | Msa0899350 | 0.811588 | 6.494853e-51 | -8.615850e-47 |
| Msa0724150 | Msa0943170 | 0.834414 | 3.038364e-56 | -8.615850e-47 |
| Msa0724150 | Msa0950000 | 0.808753 | 2.652536e-50 | -8.615850e-47 |
| Msa0724150 | Msa0960830 | 0.801308 | 9.571353e-49 | -8.615850e-47 |
| Msa0724150 | Msa0963020 | 0.824618 | 7.322608e-54 | -8.615850e-47 |
| Msa0724150 | Msa0967370 | 0.825690 | 4.085494e-54 | -8.615850e-47 |
| Msa0724150 | Msa0976330 | 0.801014 | 1.099379e-48 | -8.615850e-47 |
| Msa0724150 | Msa0980940 | 0.826196 | 3.097443e-54 | -8.615850e-47 |
| Msa0724150 | Msa0981430 | 0.857776 | 1.296240e-62 | -8.615850e-47 |
| Msa0724150 | Msa0990590 | 0.800463 | 1.424438e-48 | -8.615850e-47 |
| Msa0724150 | Msa1025940 | 0.839452 | 1.571233e-57 | -8.615850e-47 |
| Msa0724150 | Msa1044350 | 0.807449 | 5.027515e-50 | -8.615850e-47 |
| Msa0724150 | Msa1083880 | 0.847875 | 8.768696e-60 | -8.615850e-47 |
| Msa0724150 | Msa1093330 | 0.818587 | 1.813010e-52 | -8.615850e-47 |
| Msa0724150 | Msa1125550 | 0.807348 | 5.282648e-50 | -8.615850e-47 |
| Msa0724150 | Msa1178050 | 0.824284 | 8.772546e-54 | -8.615850e-47 |
| Msa0724150 | Msa1179980 | 0.811583 | 6.511701e-51 | -8.615850e-47 |
| Msa0724150 | Msa1181170 | -0.818637 | 1.766543e-52 | -8.615850e-47 |
| Msa0724150 | Msa1184370 | 0.818097 | 2.341342e-52 | -8.615850e-47 |
| Msa0724150 | Msa1186130 | 0.815896 | 7.310455e-52 | -8.615850e-47 |
| Msa0724150 | Msa1201830 | 0.826519 | 2.594187e-54 | -8.615850e-47 |
| Msa0724150 | Msa1227690 | 0.841055 | 5.993515e-58 | -8.615850e-47 |
| Msa0724150 | Msa1235250 | 0.802552 | 5.313572e-49 | -8.615850e-47 |
| Msa0724150 | Msa1254710 | 0.823160 | 1.608879e-53 | -8.615850e-47 |
| Msa0724150 | Msa1256770 | 0.836572 | 8.651822e-57 | -8.615850e-47 |
| Msa0724150 | Msa1270620 | 0.801372 | 9.290024e-49 | -8.615850e-47 |
| Msa0724150 | Msa1270690 | 0.804017 | 2.643694e-49 | -8.615850e-47 |
| Msa0724150 | Msa1286510 | 0.817769 | 2.776879e-52 | -8.615850e-47 |
| Msa0724150 | Msa1294840 | 0.820692 | 5.995555e-53 | -8.615850e-47 |
| Msa0724150 | Msa1301750 | 0.809642 | 1.710722e-50 | -8.615850e-47 |
| Msa0724150 | Msa1306990 | 0.811565 | 6.568461e-51 | -8.615850e-47 |
| Msa0724150 | Msa1345450 | 0.824607 | 7.366354e-54 | -8.615850e-47 |
| Msa0724150 | Msa1389680 | 0.828770 | 7.474494e-55 | -8.615850e-47 |
| Msa0724150 | Msa1397940 | 0.820303 | 7.364009e-53 | -8.615850e-47 |
| Msa0724150 | Msa1398860 | 0.802045 | 6.758793e-49 | -8.615850e-47 |
| Msa0724150 | Msa1408150 | 0.807375 | 5.211722e-50 | -8.615850e-47 |
| Msa0724150 | Msa1432480 | 0.826440 | 2.709240e-54 | -8.615850e-47 |
| Msa0724150 | Msa1435440 | 0.808723 | 2.691983e-50 | -8.615850e-47 |
| Msa0724150 | Msa1438640 | 0.813431 | 2.568201e-51 | -8.615850e-47 |
| Msa0724150 | Msa1442850 | 0.809831 | 1.557568e-50 | -8.615850e-47 |
| Msa0724150 | Msa1457790 | 0.828270 | 9.867684e-55 | -8.615850e-47 |
| Msa0127850 | Msa0724150 | 0.839444 | 1.579243e-57 | -8.615850e-47 |
| Msa0131450 | Msa0724150 | 0.803226 | 3.857454e-49 | -8.615850e-47 |
| Msa0165440 | Msa0724150 | 0.839101 | 1.938309e-57 | -8.615850e-47 |
| Msa0166750 | Msa0724150 | 0.821663 | 3.582019e-53 | -8.615850e-47 |
| Msa0174000 | Msa0724150 | 0.826791 | 2.234709e-54 | -8.615850e-47 |
| Msa0174770 | Msa0724150 | 0.805237 | 1.471108e-49 | -8.615850e-47 |
| Msa0177230 | Msa0724150 | 0.827806 | 1.276787e-54 | -8.615850e-47 |
| Msa0198530 | Msa0724150 | 0.808679 | 2.751049e-50 | -8.615850e-47 |
| Msa0215360 | Msa0724150 | 0.812208 | 4.758404e-51 | -8.615850e-47 |
| Msa0221600 | Msa0724150 | 0.833595 | 4.871975e-56 | -8.615850e-47 |
| Msa0384670 | Msa0724150 | 0.801987 | 6.947607e-49 | -8.615850e-47 |
| Msa0384880 | Msa0724150 | 0.814731 | 1.327246e-51 | -8.615850e-47 |
| Msa0403190 | Msa0724150 | 0.823010 | 1.743853e-53 | -8.615850e-47 |
| Msa0434570 | Msa0724150 | 0.803089 | 4.116990e-49 | -8.615850e-47 |
| Msa0434770 | Msa0724150 | 0.811589 | 6.489885e-51 | -8.615850e-47 |
| Msa0474700 | Msa0724150 | 0.857077 | 2.086007e-62 | -8.615850e-47 |
| Msa0478580 | Msa0724150 | 0.819447 | 1.156082e-52 | -8.615850e-47 |
| Msa0239450 | Msa0724150 | 0.822549 | 2.231970e-53 | -8.615850e-47 |
| Msa0239940 | Msa0724150 | 0.828080 | 1.096371e-54 | -8.615850e-47 |
| Msa0267870 | Msa0724150 | 0.830242 | 3.279150e-55 | -8.615850e-47 |
| Msa0282890 | Msa0724150 | 0.845555 | 3.775754e-59 | -8.615850e-47 |
| Msa0291520 | Msa0724150 | 0.839461 | 1.562597e-57 | -8.615850e-47 |
| Msa0299330 | Msa0724150 | 0.811816 | 5.794962e-51 | -8.615850e-47 |
| Msa0308220 | Msa0724150 | 0.822591 | 2.182960e-53 | -8.615850e-47 |
| Msa0321190 | Msa0724150 | 0.858502 | 7.884137e-63 | -8.615850e-47 |
| Msa0343190 | Msa0724150 | 0.808700 | 2.722327e-50 | -8.615850e-47 |
| Msa0505150 | Msa0724150 | 0.812425 | 4.266611e-51 | -8.615850e-47 |
| Msa0523680 | Msa0724150 | 0.811940 | 5.443738e-51 | -8.615850e-47 |
| Msa0558350 | Msa0724150 | 0.809182 | 2.147614e-50 | -8.615850e-47 |
| Msa0578090 | Msa0724150 | 0.814579 | 1.434139e-51 | -8.615850e-47 |
| Msa0586850 | Msa0724150 | 0.807670 | 4.512214e-50 | -8.615850e-47 |
| Msa0593700 | Msa0724150 | 0.816129 | 6.484029e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0724150 | MtrunA17_Chr5g0415211 | 93.151 | 219 | 10 | 1 | 1 | 219 | 1 | 214 | 7.51e-137 | 382 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0724150 | AT1G69980.1 | 46.818 | 220 | 101 | 3 | 1 | 219 | 1 | 205 | 1.54e-59 | 186 |
Find 46 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAATGGTTTGGAGTATTT+TGG | 0.171663 | 5_1:+22427553 | Msa0724150:five_prime_UTR |
| CATATAGATGAACACGTTTA+TGG | 0.204792 | 5_1:+22429405 | Msa0724150:CDS |
| AGCAGCAATGGGTTGAATTA+TGG | 0.285103 | 5_1:-22431285 | None:intergenic |
| AATAGGAAATTTCGAGATTC+AGG | 0.291866 | 5_1:+22431205 | Msa0724150:three_prime_UTR |
| TGCTAATCTGATCAATTCTT+AGG | 0.305245 | 5_1:+22431304 | Msa0724150:three_prime_UTR |
| TTCAGCGAAGATTCTGAAAA+TGG | 0.322039 | 5_1:+22427832 | Msa0724150:intron |
| TCTGAAAATGGACATGGGTT+TGG | 0.350341 | 5_1:+22427844 | Msa0724150:CDS |
| ATCAATTCTTAGGTAAAGTT+AGG | 0.351611 | 5_1:+22431314 | Msa0724150:three_prime_UTR |
| CAACCTTCAATACTCGCTTT+AGG | 0.358816 | 5_1:+22427683 | Msa0724150:CDS |
| CTTCACATTTGAATGGAATT+CGG | 0.363187 | 5_1:-22429293 | None:intergenic |
| TCTACTTTGGAAATTTCTAA+TGG | 0.380217 | 5_1:+22429369 | Msa0724150:CDS |
| ACAGTCACAGAGAACATTAC+TGG | 0.393318 | 5_1:+22429443 | Msa0724150:CDS |
| AAGAAGGCGGCTGCCATGTC+TGG | 0.412691 | 5_1:+22431051 | Msa0724150:CDS |
| TTAATCTCTTCACATTTGAA+TGG | 0.418906 | 5_1:-22429300 | None:intergenic |
| TCAGAAAACTCGGTCTACTT+TGG | 0.434982 | 5_1:+22429356 | Msa0724150:CDS |
| ATGGCGAAGAAGAACAGAAA+TGG | 0.436292 | 5_1:-22427647 | None:intergenic |
| TGACCTAAAGCGAGTATTGA+AGG | 0.444323 | 5_1:-22427686 | None:intergenic |
| AAATATCGCTGTAGTGAGAC+AGG | 0.446528 | 5_1:+22429267 | Msa0724150:CDS |
| CCATTGAGTGAAATTATTTG+AGG | 0.459084 | 5_1:-22431361 | None:intergenic |
| ATAAGAAACAGAGAATGGTT+TGG | 0.467011 | 5_1:+22427543 | Msa0724150:five_prime_UTR |
| TTGATCAGATTAGCAGCAAT+GGG | 0.473546 | 5_1:-22431296 | None:intergenic |
| GAAGAGAAGTTGTCAGTGCT+TGG | 0.474771 | 5_1:+22429537 | Msa0724150:CDS |
| CGCTTCAGATAATAAGTCAC+AGG | 0.478777 | 5_1:+22429476 | Msa0724150:CDS |
| TGGTTATGTTGCAGCAGGAA+GGG | 0.479759 | 5_1:+22431071 | Msa0724150:CDS |
| AAGGAGCACAATCAAAAGTA+AGG | 0.483222 | 5_1:-22427912 | None:intergenic |
| AACTTCTCTTCAGTATCTGC+AGG | 0.509140 | 5_1:-22429525 | None:intergenic |
| ATAAAATAAGAAACAGAGAA+TGG | 0.524566 | 5_1:+22427538 | Msa0724150:five_prime_UTR |
| CTGGTTATGTTGCAGCAGGA+AGG | 0.526430 | 5_1:+22431070 | Msa0724150:CDS |
| TCCATGCATCTACTCTGAAA+AGG | 0.529268 | 5_1:+22427948 | Msa0724150:CDS |
| GGTTATGTTGCAGCAGGAAG+GGG | 0.534822 | 5_1:+22431072 | Msa0724150:CDS |
| AATAAATCGCATCGTACAGC+AGG | 0.536477 | 5_1:-22431125 | None:intergenic |
| ATTGATCAGATTAGCAGCAA+TGG | 0.537753 | 5_1:-22431297 | None:intergenic |
| AGGTTGATGAAATATAGAAA+TGG | 0.540588 | 5_1:-22427666 | None:intergenic |
| AAAGTAAGGTTACTTCCTGA+AGG | 0.543660 | 5_1:-22427898 | None:intergenic |
| CTGTGACTTATTATCTGAAG+CGG | 0.556905 | 5_1:-22429475 | None:intergenic |
| TGAAGAAAATAAAATTAGTG+TGG | 0.564322 | 5_1:-22431148 | None:intergenic |
| ATGTCTGGTTATGTTGCAGC+AGG | 0.568805 | 5_1:+22431066 | Msa0724150:CDS |
| GAGTAGATGCATGGAACACA+AGG | 0.582215 | 5_1:-22427940 | None:intergenic |
| AAACAAAACCTCAGAAAACT+CGG | 0.582634 | 5_1:+22429346 | Msa0724150:CDS |
| CATGGAACACAAGGACCAGA+AGG | 0.606461 | 5_1:-22427931 | None:intergenic |
| GAAGATTCTGAAAATGGACA+TGG | 0.623119 | 5_1:+22427838 | Msa0724150:CDS |
| TGCTGCAACATAACCAGACA+TGG | 0.629175 | 5_1:-22431064 | None:intergenic |
| GAAGGGGTCAGACAAACTCT+CGG | 0.652174 | 5_1:+22431088 | Msa0724150:CDS |
| AAGATTCTGAAAATGGACAT+GGG | 0.662218 | 5_1:+22427839 | Msa0724150:CDS |
| AGAGATTAAACATTCAACGA+AGG | 0.680316 | 5_1:+22429314 | Msa0724150:CDS |
| AATATCGCTGTAGTGAGACA+GGG | 0.738319 | 5_1:+22429268 | Msa0724150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAATTCTAAAATAACAAA+AGG | - | chr5_1:22427990-22428009 | None:intergenic | 10.0% |
| !!! | ATGATATTTTATTTTGTAAT+AGG | + | chr5_1:22431188-22431207 | Msa0724150:three_prime_UTR | 10.0% |
| !!! | TTTTTCTTGTTATTTGAATT+GGG | + | chr5_1:22427809-22427828 | Msa0724150:intron | 15.0% |
| !!! | TTCTATTTTTTGATAGAATA+AGG | - | chr5_1:22428410-22428429 | None:intergenic | 15.0% |
| !!! | TATAATAATAAATCTGAGAT+AGG | - | chr5_1:22429583-22429602 | None:intergenic | 15.0% |
| !! | AATATATATGCATATATGAA+TGG | - | chr5_1:22429783-22429802 | None:intergenic | 15.0% |
| !! | AAATCAAACATCTTAAAATT+TGG | + | chr5_1:22430180-22430199 | Msa0724150:intron | 15.0% |
| !! | AATCAAACATCTTAAAATTT+GGG | + | chr5_1:22430181-22430200 | Msa0724150:intron | 15.0% |
| !! | ATAAAATAAGAAACAGAGAA+TGG | + | chr5_1:22427538-22427557 | Msa0724150:five_prime_UTR | 20.0% |
| !!! | CTTTTTCTTGTTATTTGAAT+TGG | + | chr5_1:22427808-22427827 | Msa0724150:intron | 20.0% |
| !!! | TTCTAAAATAACAAAAGGAA+AGG | - | chr5_1:22427985-22428004 | None:intergenic | 20.0% |
| !! | AGTTGAAGTTATTCATATAT+AGG | + | chr5_1:22428009-22428028 | Msa0724150:intron | 20.0% |
| !! | GTTGAAGTTATTCATATATA+GGG | + | chr5_1:22428010-22428029 | Msa0724150:intron | 20.0% |
| !! | TTGAAGTTATTCATATATAG+GGG | + | chr5_1:22428011-22428030 | Msa0724150:intron | 20.0% |
| !!! | TTTTTGATAGAATAAGGTTT+AGG | - | chr5_1:22428404-22428423 | None:intergenic | 20.0% |
| !!! | ATGTCATTTTGTCAAATTTA+CGG | + | chr5_1:22428607-22428626 | Msa0724150:intron | 20.0% |
| !! | TAGTTAACAATAAAGTAAAG+AGG | - | chr5_1:22429213-22429232 | None:intergenic | 20.0% |
| !! | TGAAGAAAATAAAATTAGTG+TGG | - | chr5_1:22431151-22431170 | None:intergenic | 20.0% |
| !!! | TGAATTCATTGCTTTTTCAT+CGG | - | chr5_1:22427606-22427625 | None:intergenic | 25.0% |
| ! | AACAGAAATGGAAGAAAAAT+TGG | - | chr5_1:22427638-22427657 | None:intergenic | 25.0% |
| !!! | AGGTTGATGAAATATAGAAA+TGG | - | chr5_1:22427669-22427688 | None:intergenic | 25.0% |
| !!! | ACAATTAAGGTTTTGAATAG+TGG | + | chr5_1:22428167-22428186 | Msa0724150:intron | 25.0% |
| ! | CATAATTCTCTGTAATATCA+AGG | - | chr5_1:22428231-22428250 | None:intergenic | 25.0% |
| ! | CTTGATATTACAGAGAATTA+TGG | + | chr5_1:22428229-22428248 | Msa0724150:intron | 25.0% |
| ! | TAGAAAAGAAAAGAGAATCA+TGG | + | chr5_1:22428425-22428444 | Msa0724150:intron | 25.0% |
| !! | ATGCTTTACAAAACTTCTTT+TGG | - | chr5_1:22428876-22428895 | None:intergenic | 25.0% |
| !! | ATCTTTTAAATTGCTCGAAT+TGG | + | chr5_1:22428979-22428998 | Msa0724150:intron | 25.0% |
| !! | TCTTTTAAATTGCTCGAATT+GGG | + | chr5_1:22428980-22428999 | Msa0724150:intron | 25.0% |
| ! | ATATGGTTCATCTATTTAAG+CGG | - | chr5_1:22429023-22429042 | None:intergenic | 25.0% |
| !!! | ATTGATTTTATGTCTACGTT+AGG | + | chr5_1:22429097-22429116 | Msa0724150:intron | 25.0% |
| !! | TCTTTGTTATATGTATGCTT+GGG | + | chr5_1:22429135-22429154 | Msa0724150:intron | 25.0% |
| !!! | TTGTTAACTACAAGCTTTTT+TGG | + | chr5_1:22429223-22429242 | Msa0724150:intron | 25.0% |
| !!! | TGTTAACTACAAGCTTTTTT+GGG | + | chr5_1:22429224-22429243 | Msa0724150:intron | 25.0% |
| ! | TTAATCTCTTCACATTTGAA+TGG | - | chr5_1:22429303-22429322 | None:intergenic | 25.0% |
| !! | TCTACTTTGGAAATTTCTAA+TGG | + | chr5_1:22429369-22429388 | Msa0724150:CDS | 25.0% |
| ! | TTTATTAGCAATCTGTCAAT+AGG | + | chr5_1:22429850-22429869 | Msa0724150:intron | 25.0% |
| ! | TTATTAGCAATCTGTCAATA+GGG | + | chr5_1:22429851-22429870 | Msa0724150:intron | 25.0% |
| ! | GTCAGTTATGTTCATAAATT+AGG | + | chr5_1:22430018-22430037 | Msa0724150:intron | 25.0% |
| ! | GTTATGTTCATAAATTAGGA+CGG | + | chr5_1:22430022-22430041 | Msa0724150:intron | 25.0% |
| ! | GATAAATCTTATTCTGTGTT+CGG | + | chr5_1:22430066-22430085 | Msa0724150:intron | 25.0% |
| !!! | CCTTAAAAAGTGTTTATAAG+TGG | - | chr5_1:22430258-22430277 | None:intergenic | 25.0% |
| !!! | CCACTTATAAACACTTTTTA+AGG | + | chr5_1:22430255-22430274 | Msa0724150:intron | 25.0% |
| ! | ATCCAATACAAATCCAAATA+TGG | + | chr5_1:22430306-22430325 | Msa0724150:intron | 25.0% |
| ! | TACCATATTTGGATTTGTAT+TGG | - | chr5_1:22430311-22430330 | None:intergenic | 25.0% |
| ! | CCAATGTATAATACCATATT+TGG | - | chr5_1:22430322-22430341 | None:intergenic | 25.0% |
| ! | CCAAATATGGTATTATACAT+TGG | + | chr5_1:22430319-22430338 | Msa0724150:intron | 25.0% |
| ! | ATTATACATTGGAATCTCTA+AGG | + | chr5_1:22430330-22430349 | Msa0724150:intron | 25.0% |
| !!! | GTATTGTTATGTTAGTTTGT+TGG | + | chr5_1:22430481-22430500 | Msa0724150:intron | 25.0% |
| !!! | TATGTTAGTTTGTTGGAATT+AGG | + | chr5_1:22430488-22430507 | Msa0724150:intron | 25.0% |
| !!! | CATTGTTTTTCTTAAATTCC+CGG | - | chr5_1:22430546-22430565 | None:intergenic | 25.0% |
| ! | ATCCTATAATATCAACACAA+AGG | - | chr5_1:22430870-22430889 | None:intergenic | 25.0% |
| ! | ATCAATTCTTAGGTAAAGTT+AGG | + | chr5_1:22431314-22431333 | Msa0724150:three_prime_UTR | 25.0% |
| ATAAGAAACAGAGAATGGTT+TGG | + | chr5_1:22427543-22427562 | Msa0724150:five_prime_UTR | 30.0% | |
| ! | AAGATTCTGAAAATGGACAT+GGG | + | chr5_1:22427839-22427858 | Msa0724150:CDS | 30.0% |
| AGTTTCAAAGAAAAACCTTC+AGG | + | chr5_1:22427883-22427902 | Msa0724150:CDS | 30.0% | |
| AACCTTAAGGTGAATAAATC+GGG | - | chr5_1:22428087-22428106 | None:intergenic | 30.0% | |
| CAACCTTAAGGTGAATAAAT+CGG | - | chr5_1:22428088-22428107 | None:intergenic | 30.0% | |
| ACTTGACCAGAAAAAAAGAA+GGG | + | chr5_1:22428127-22428146 | Msa0724150:intron | 30.0% | |
| AAAAAGAAGGGGTTTGAATT+TGG | + | chr5_1:22428139-22428158 | Msa0724150:intron | 30.0% | |
| GAATAAGGTTTAGGTAAGTT+AGG | - | chr5_1:22428395-22428414 | None:intergenic | 30.0% | |
| TATCAAAAACCGTTATGTTG+TGG | + | chr5_1:22428488-22428507 | Msa0724150:intron | 30.0% | |
| AAGCCTTTGATAAGAAATGT+CGG | - | chr5_1:22428525-22428544 | None:intergenic | 30.0% | |
| ! | TTTCTTATCAAAGGCTTGTT+TGG | + | chr5_1:22428528-22428547 | Msa0724150:intron | 30.0% |
| GTAAGACACACAAAAACAAA+GGG | - | chr5_1:22428658-22428677 | None:intergenic | 30.0% | |
| TGTAAGACACACAAAAACAA+AGG | - | chr5_1:22428659-22428678 | None:intergenic | 30.0% | |
| ! | ACAAAACTTCTTTTGGATGA+GGG | - | chr5_1:22428869-22428888 | None:intergenic | 30.0% |
| ! | TACAAAACTTCTTTTGGATG+AGG | - | chr5_1:22428870-22428889 | None:intergenic | 30.0% |
| ! | CTCTTTGTTATATGTATGCT+TGG | + | chr5_1:22429134-22429153 | Msa0724150:intron | 30.0% |
| ATGTATAGTACAAAGTGAGA+AGG | - | chr5_1:22429163-22429182 | None:intergenic | 30.0% | |
| !!! | TCTTTTGCCTTGTTATTCAT+AGG | + | chr5_1:22429187-22429206 | Msa0724150:intron | 30.0% |
| CTTCACATTTGAATGGAATT+CGG | - | chr5_1:22429296-22429315 | None:intergenic | 30.0% | |
| AGAGATTAAACATTCAACGA+AGG | + | chr5_1:22429314-22429333 | Msa0724150:CDS | 30.0% | |
| AAACAAAACCTCAGAAAACT+CGG | + | chr5_1:22429346-22429365 | Msa0724150:CDS | 30.0% | |
| CATATAGATGAACACGTTTA+TGG | + | chr5_1:22429405-22429424 | Msa0724150:CDS | 30.0% | |
| !! | GTTTGGTTCTTTAAATCTCA+AGG | + | chr5_1:22429736-22429755 | Msa0724150:intron | 30.0% |
| TATTAGCAATCTGTCAATAG+GGG | + | chr5_1:22429852-22429871 | Msa0724150:intron | 30.0% | |
| TTCGGAAAATTGAAGAAGTA+TGG | + | chr5_1:22430084-22430103 | Msa0724150:intron | 30.0% | |
| AAACGGGATGGATATTATTA+AGG | - | chr5_1:22430373-22430392 | None:intergenic | 30.0% | |
| TAAAGCAGAAAGTTAGATCA+TGG | - | chr5_1:22430459-22430478 | None:intergenic | 30.0% | |
| TGATCTAACTTTCTGCTTTA+TGG | + | chr5_1:22430459-22430478 | Msa0724150:intron | 30.0% | |
| CGGGAATTTAAGAAAAACAA+TGG | + | chr5_1:22430544-22430563 | Msa0724150:intron | 30.0% | |
| AAGAACTAACGAGATAAAGA+CGG | - | chr5_1:22430634-22430653 | None:intergenic | 30.0% | |
| TTTGTTCATAGCTTTCTGTT+TGG | + | chr5_1:22430699-22430718 | Msa0724150:intron | 30.0% | |
| TAATATCAACACAAAGGTCA+AGG | - | chr5_1:22430864-22430883 | None:intergenic | 30.0% | |
| ! | GACCTTTGTGTTGATATTAT+AGG | + | chr5_1:22430865-22430884 | Msa0724150:intron | 30.0% |
| AAACCTCATTTAACGACAAA+CGG | - | chr5_1:22430939-22430958 | None:intergenic | 30.0% | |
| TGTTAACCGTGTATATTATG+TGG | + | chr5_1:22430960-22430979 | Msa0724150:intron | 30.0% | |
| CGTATTCCACATAATATACA+CGG | - | chr5_1:22430969-22430988 | None:intergenic | 30.0% | |
| ! | ATTTTCTTGTTGCTCATTAG+CGG | + | chr5_1:22431006-22431025 | Msa0724150:CDS | 30.0% |
| CATATACCTGAGAAAAAAGA+AGG | + | chr5_1:22431035-22431054 | Msa0724150:CDS | 30.0% | |
| AATAGGAAATTTCGAGATTC+AGG | + | chr5_1:22431205-22431224 | Msa0724150:three_prime_UTR | 30.0% | |
| TGCTAATCTGATCAATTCTT+AGG | + | chr5_1:22431304-22431323 | Msa0724150:three_prime_UTR | 30.0% | |
| !! | GAGAATGGTTTGGAGTATTT+TGG | + | chr5_1:22427553-22427572 | Msa0724150:five_prime_UTR | 35.0% |
| ! | TTCAGCGAAGATTCTGAAAA+TGG | + | chr5_1:22427832-22427851 | Msa0724150:intron | 35.0% |
| ! | GAAGATTCTGAAAATGGACA+TGG | + | chr5_1:22427838-22427857 | Msa0724150:CDS | 35.0% |
| AAAGTAAGGTTACTTCCTGA+AGG | - | chr5_1:22427901-22427920 | None:intergenic | 35.0% | |
| ! | AAGGAGCACAATCAAAAGTA+AGG | - | chr5_1:22427915-22427934 | None:intergenic | 35.0% |
| ATAAATCGGGAAATTCAACC+TGG | - | chr5_1:22428074-22428093 | None:intergenic | 35.0% | |
| TTCCCGATTTATTCACCTTA+AGG | + | chr5_1:22428082-22428101 | Msa0724150:intron | 35.0% | |
| TGGCTAGAAATTCAACCTTA+AGG | - | chr5_1:22428100-22428119 | None:intergenic | 35.0% | |
| GACTTGACCAGAAAAAAAGA+AGG | + | chr5_1:22428126-22428145 | Msa0724150:intron | 35.0% | |
| CTTGACCAGAAAAAAAGAAG+GGG | + | chr5_1:22428128-22428147 | Msa0724150:intron | 35.0% | |
| !!! | TCAAACCCCTTCTTTTTTTC+TGG | - | chr5_1:22428136-22428155 | None:intergenic | 35.0% |
| !! | GAATTTGGCACTGACAATTA+AGG | + | chr5_1:22428154-22428173 | Msa0724150:intron | 35.0% |
| !!! | AAGGTTTTGAATAGTGGTCA+CGG | + | chr5_1:22428173-22428192 | Msa0724150:intron | 35.0% |
| CAGAGAATTATGGCCAATAA+AGG | + | chr5_1:22428239-22428258 | Msa0724150:intron | 35.0% | |
| AAAGACTGAAACGCTTACAA+AGG | - | chr5_1:22428351-22428370 | None:intergenic | 35.0% | |
| CTACAAAGACCACAACATAA+CGG | - | chr5_1:22428500-22428519 | None:intergenic | 35.0% | |
| ! | TTTTGTGTGTCTTACACAAG+CGG | + | chr5_1:22428663-22428682 | Msa0724150:intron | 35.0% |
| !! | TGTGATGTCAAAGTGTTGAA+TGG | + | chr5_1:22428795-22428814 | Msa0724150:intron | 35.0% |
| !! | GTGATGTCAAAGTGTTGAAT+GGG | + | chr5_1:22428796-22428815 | Msa0724150:intron | 35.0% |
| !! | TGATGTCAAAGTGTTGAATG+GGG | + | chr5_1:22428797-22428816 | Msa0724150:intron | 35.0% |
| ! | ATTTGAAGTGAACATCGAAC+TGG | + | chr5_1:22428933-22428952 | Msa0724150:intron | 35.0% |
| CTATTTAAGCGGTTTGATTG+TGG | - | chr5_1:22429012-22429031 | None:intergenic | 35.0% | |
| AAAGAGGCCTATGAATAACA+AGG | - | chr5_1:22429197-22429216 | None:intergenic | 35.0% | |
| !!! | TAACTACAAGCTTTTTTGGG+TGG | + | chr5_1:22429227-22429246 | Msa0724150:intron | 35.0% |
| !!! | CTTTTTTGGGTGGAGTTATA+GGG | + | chr5_1:22429237-22429256 | Msa0724150:intron | 35.0% |
| CTGTGACTTATTATCTGAAG+CGG | - | chr5_1:22429478-22429497 | None:intergenic | 35.0% | |
| !! | CATTGATTAGCTTCTGAACT+TGG | + | chr5_1:22429605-22429624 | Msa0724150:intron | 35.0% |
| AGCTTCTGAACTTGGTTTAA+TGG | + | chr5_1:22429613-22429632 | Msa0724150:intron | 35.0% | |
| AACTAATGTGTCCAACTTAG+AGG | + | chr5_1:22429683-22429702 | Msa0724150:intron | 35.0% | |
| GTCTGCTGATATTTAGTGTT+TGG | + | chr5_1:22429719-22429738 | Msa0724150:intron | 35.0% | |
| CTCAAGGAAGAATGTGTAAT+TGG | + | chr5_1:22429752-22429771 | Msa0724150:intron | 35.0% | |
| GGTAAAGTTAGAAGAAGCAA+AGG | + | chr5_1:22429885-22429904 | Msa0724150:intron | 35.0% | |
| ATGCAGATAAATGCAGCTTA+TGG | - | chr5_1:22429929-22429948 | None:intergenic | 35.0% | |
| !! | AAGAATTACCTTGGTGCTTA+AGG | - | chr5_1:22429980-22429999 | None:intergenic | 35.0% |
| ATAAGAGTTCGTACACCATA+TGG | - | chr5_1:22430115-22430134 | None:intergenic | 35.0% | |
| ! | CTAACTCAACTTTTCGAAAC+CGG | + | chr5_1:22430210-22430229 | Msa0724150:intron | 35.0% |
| AAGTGTTTATAAGTGGTGTG+CGG | - | chr5_1:22430251-22430270 | None:intergenic | 35.0% | |
| AGGCCATATATCATCCAATA+CGG | + | chr5_1:22430275-22430294 | Msa0724150:intron | 35.0% | |
| ATCCCGTATTGGATGATATA+TGG | - | chr5_1:22430281-22430300 | None:intergenic | 35.0% | |
| ! | TAATATCCATCCCGTTTTAG+TGG | + | chr5_1:22430376-22430395 | Msa0724150:intron | 35.0% |
| ! | TGTTTTTCTTAAATTCCCGG+TGG | - | chr5_1:22430543-22430562 | None:intergenic | 35.0% |
| TACATTGATATGAGTACGTG+CGG | - | chr5_1:22430587-22430606 | None:intergenic | 35.0% | |
| AACCTCATTTAACGACAAAC+GGG | - | chr5_1:22430938-22430957 | None:intergenic | 35.0% | |
| TTATGTGGAATACGTTGTAC+AGG | + | chr5_1:22430975-22430994 | Msa0724150:intron | 35.0% | |
| TATGTGGAATACGTTGTACA+GGG | + | chr5_1:22430976-22430995 | Msa0724150:intron | 35.0% | |
| ATACCTGAGAAAAAAGAAGG+CGG | + | chr5_1:22431038-22431057 | Msa0724150:CDS | 35.0% | |
| TTGATCAGATTAGCAGCAAT+GGG | - | chr5_1:22431299-22431318 | None:intergenic | 35.0% | |
| ATTGATCAGATTAGCAGCAA+TGG | - | chr5_1:22431300-22431319 | None:intergenic | 35.0% | |
| !! | GGTTTGGAGTATTTTGGAGA+AGG | + | chr5_1:22427559-22427578 | Msa0724150:five_prime_UTR | 40.0% |
| ATGGCGAAGAAGAACAGAAA+TGG | - | chr5_1:22427650-22427669 | None:intergenic | 40.0% | |
| CAACCTTCAATACTCGCTTT+AGG | + | chr5_1:22427683-22427702 | Msa0724150:CDS | 40.0% | |
| !! | TGACCTAAAGCGAGTATTGA+AGG | - | chr5_1:22427689-22427708 | None:intergenic | 40.0% |
| AGAGAGAGAAAGAGAGAGAT+TGG | - | chr5_1:22427725-22427744 | None:intergenic | 40.0% | |
| TCTGAAAATGGACATGGGTT+TGG | + | chr5_1:22427844-22427863 | Msa0724150:CDS | 40.0% | |
| !! | ACTTTTGATTGTGCTCCTTC+TGG | + | chr5_1:22427916-22427935 | Msa0724150:CDS | 40.0% |
| ! | TCCATGCATCTACTCTGAAA+AGG | + | chr5_1:22427948-22427967 | Msa0724150:CDS | 40.0% |
| ! | ACCTTTTCAGAGTAGATGCA+TGG | - | chr5_1:22427952-22427971 | None:intergenic | 40.0% |
| !! | AGGTTGAATTTCTAGCCACT+AGG | + | chr5_1:22428102-22428121 | Msa0724150:intron | 40.0% |
| TGAATAGTGGTCACGGTTTA+AGG | + | chr5_1:22428180-22428199 | Msa0724150:intron | 40.0% | |
| GAATTATGGCCAATAAAGGC+TGG | + | chr5_1:22428243-22428262 | Msa0724150:intron | 40.0% | |
| AATGTGAGGACTTCTTTGGT+GGG | + | chr5_1:22428312-22428331 | Msa0724150:intron | 40.0% | |
| ! | TTCTTTGGTGGGTGATTTGT+AGG | + | chr5_1:22428323-22428342 | Msa0724150:intron | 40.0% |
| AACCACAACAAGACTACGAT+CGG | - | chr5_1:22428461-22428480 | None:intergenic | 40.0% | |
| ! | GCACCGACATTTCTTATCAA+AGG | + | chr5_1:22428519-22428538 | Msa0724150:intron | 40.0% |
| CCAAAGAGGATAGGTTACAA+AGG | - | chr5_1:22428635-22428654 | None:intergenic | 40.0% | |
| CCTTTGTAACCTATCCTCTT+TGG | + | chr5_1:22428632-22428651 | Msa0724150:intron | 40.0% | |
| ACAAAAACAAAGGGCCAAAG+AGG | - | chr5_1:22428649-22428668 | None:intergenic | 40.0% | |
| TTTGTGTGTCTTACACAAGC+GGG | + | chr5_1:22428664-22428683 | Msa0724150:intron | 40.0% | |
| !! | TCAAAGTGTTGAATGGGGAA+TGG | + | chr5_1:22428802-22428821 | Msa0724150:intron | 40.0% |
| !! | CAAAGTGTTGAATGGGGAAT+GGG | + | chr5_1:22428803-22428822 | Msa0724150:intron | 40.0% |
| !! | AAAGTGTTGAATGGGGAATG+GGG | + | chr5_1:22428804-22428823 | Msa0724150:intron | 40.0% |
| ACATCGAACTGGTGAAATCT+TGG | + | chr5_1:22428944-22428963 | Msa0724150:intron | 40.0% | |
| CATCGAACTGGTGAAATCTT+GGG | + | chr5_1:22428945-22428964 | Msa0724150:intron | 40.0% | |
| !!! | GCTTTTTTGGGTGGAGTTAT+AGG | + | chr5_1:22429236-22429255 | Msa0724150:intron | 40.0% |
| AAATATCGCTGTAGTGAGAC+AGG | + | chr5_1:22429267-22429286 | Msa0724150:CDS | 40.0% | |
| AATATCGCTGTAGTGAGACA+GGG | + | chr5_1:22429268-22429287 | Msa0724150:CDS | 40.0% | |
| ! | AAAGTAGACCGAGTTTTCTG+AGG | - | chr5_1:22429357-22429376 | None:intergenic | 40.0% |
| TCAGAAAACTCGGTCTACTT+TGG | + | chr5_1:22429356-22429375 | Msa0724150:CDS | 40.0% | |
| ACAGTCACAGAGAACATTAC+TGG | + | chr5_1:22429443-22429462 | Msa0724150:CDS | 40.0% | |
| CGCTTCAGATAATAAGTCAC+AGG | + | chr5_1:22429476-22429495 | Msa0724150:CDS | 40.0% | |
| AACTTCTCTTCAGTATCTGC+AGG | - | chr5_1:22429528-22429547 | None:intergenic | 40.0% | |
| CACAGCTTAATCCTCTAAGT+TGG | - | chr5_1:22429697-22429716 | None:intergenic | 40.0% | |
| TTCTATAAGCTCGACTACTG+TGG | - | chr5_1:22429821-22429840 | None:intergenic | 40.0% | |
| ! | GCTTTTCGCAAGAATTACCT+TGG | - | chr5_1:22429989-22430008 | None:intergenic | 40.0% |
| GGCCATATATCATCCAATAC+GGG | + | chr5_1:22430276-22430295 | Msa0724150:intron | 40.0% | |
| TTGGATGAGAAATCCCGTAT+TGG | - | chr5_1:22430292-22430311 | None:intergenic | 40.0% | |
| GGGTGCAATATTTATTGTCC+TGG | + | chr5_1:22430431-22430450 | Msa0724150:intron | 40.0% | |
| GAAAGTTAGATCATGGAACC+AGG | - | chr5_1:22430452-22430471 | None:intergenic | 40.0% | |
| ! | TTAGGACTACTAGTTCTCAC+AGG | + | chr5_1:22430506-22430525 | Msa0724150:intron | 40.0% |
| ! | TAGGACTACTAGTTCTCACA+GGG | + | chr5_1:22430507-22430526 | Msa0724150:intron | 40.0% |
| AATGTACCTGTAGTGCTTGA+GGG | + | chr5_1:22430601-22430620 | Msa0724150:intron | 40.0% | |
| !! | CTCTGTCAACTTGTTACAAG+AGG | + | chr5_1:22430738-22430757 | Msa0724150:intron | 40.0% |
| TCACACGCTCTCAAATTTCA+AGG | - | chr5_1:22430822-22430841 | None:intergenic | 40.0% | |
| TACCCGTTTGTCGTTAAATG+AGG | + | chr5_1:22430933-22430952 | Msa0724150:intron | 40.0% | |
| AATAAATCGCATCGTACAGC+AGG | - | chr5_1:22431128-22431147 | None:intergenic | 40.0% | |
| !! | AGCAGCAATGGGTTGAATTA+TGG | - | chr5_1:22431288-22431307 | None:intergenic | 40.0% |
| GAGTAGATGCATGGAACACA+AGG | - | chr5_1:22427943-22427962 | None:intergenic | 45.0% | |
| TCCTGTGAGCATAGTACAGT+TGG | + | chr5_1:22428042-22428061 | Msa0724150:intron | 45.0% | |
| CCAACTAAGCCAGCCTTTAT+TGG | - | chr5_1:22428255-22428274 | None:intergenic | 45.0% | |
| !! | CCAATAAAGGCTGGCTTAGT+TGG | + | chr5_1:22428252-22428271 | Msa0724150:intron | 45.0% |
| TGCCAATGTGAGGACTTCTT+TGG | + | chr5_1:22428308-22428327 | Msa0724150:intron | 45.0% | |
| CACCAAAGAAGTCCTCACAT+TGG | - | chr5_1:22428313-22428332 | None:intergenic | 45.0% | |
| CAATGTGAGGACTTCTTTGG+TGG | + | chr5_1:22428311-22428330 | Msa0724150:intron | 45.0% | |
| TTAGGTAAGTTAGGCTCCGA+GGG | - | chr5_1:22428386-22428405 | None:intergenic | 45.0% | |
| TTTAGGTAAGTTAGGCTCCG+AGG | - | chr5_1:22428387-22428406 | None:intergenic | 45.0% | |
| AACAAAGGGCCAAAGAGGAT+AGG | - | chr5_1:22428644-22428663 | None:intergenic | 45.0% | |
| TTGTGTGTCTTACACAAGCG+GGG | + | chr5_1:22428665-22428684 | Msa0724150:intron | 45.0% | |
| CTGGTGAAATCTTGGGATCA+TGG | + | chr5_1:22428952-22428971 | Msa0724150:intron | 45.0% | |
| CCATGGAACGGAACTGAATA+TGG | - | chr5_1:22429040-22429059 | None:intergenic | 45.0% | |
| CCATATTCAGTTCCGTTCCA+TGG | + | chr5_1:22429037-22429056 | Msa0724150:intron | 45.0% | |
| GAAGAGAAGTTGTCAGTGCT+TGG | + | chr5_1:22429537-22429556 | Msa0724150:CDS | 45.0% | |
| !!! | GTTGTCAGTGCTTGGTTTTG+AGG | + | chr5_1:22429545-22429564 | Msa0724150:CDS | 45.0% |
| !! | AGAAGTATGGTGCCACCATA+TGG | + | chr5_1:22430097-22430116 | Msa0724150:intron | 45.0% |
| AGAGTTCGTACACCATATGG+TGG | - | chr5_1:22430112-22430131 | None:intergenic | 45.0% | |
| ! | AGACCACGTCTTGAGAGTAT+AGG | + | chr5_1:22430148-22430167 | Msa0724150:intron | 45.0% |
| ! | GACCACGTCTTGAGAGTATA+GGG | + | chr5_1:22430149-22430168 | Msa0724150:intron | 45.0% |
| !! | CTTTTCGAAACCGGCTTAGA+AGG | + | chr5_1:22430219-22430238 | Msa0724150:intron | 45.0% |
| AGGAAGGGTAGCCACTAAAA+CGG | - | chr5_1:22430390-22430409 | None:intergenic | 45.0% | |
| ! | AGGACTACTAGTTCTCACAG+GGG | + | chr5_1:22430508-22430527 | Msa0724150:intron | 45.0% |
| CAATGTACCTGTAGTGCTTG+AGG | + | chr5_1:22430600-22430619 | Msa0724150:intron | 45.0% | |
| TGCTGCAACATAACCAGACA+TGG | - | chr5_1:22431067-22431086 | None:intergenic | 45.0% | |
| ATGTCTGGTTATGTTGCAGC+AGG | + | chr5_1:22431066-22431085 | Msa0724150:CDS | 45.0% | |
| TGGTTATGTTGCAGCAGGAA+GGG | + | chr5_1:22431071-22431090 | Msa0724150:CDS | 45.0% | |
| !!! | AATTTTTTTTTATTGATTTT+AGG | + | chr5_1:22428711-22428730 | Msa0724150:intron | 5.0% |
| CATGGAACACAAGGACCAGA+AGG | - | chr5_1:22427934-22427953 | None:intergenic | 50.0% | |
| GCCAACTGTACTATGCTCAC+AGG | - | chr5_1:22428046-22428065 | None:intergenic | 50.0% | |
| TAGTACAGTTGGCAACGACC+AGG | + | chr5_1:22428053-22428072 | Msa0724150:intron | 50.0% | |
| ! | TTTCTGGTCAAGTCGCCTAG+TGG | - | chr5_1:22428120-22428139 | None:intergenic | 50.0% |
| AGCAGGAGTTAGACCGATTG+CGG | - | chr5_1:22428289-22428308 | None:intergenic | 50.0% | |
| TAACTCCTGCTGCCAATGTG+AGG | + | chr5_1:22428298-22428317 | Msa0724150:intron | 50.0% | |
| !! | AGCCGATCGTAGTCTTGTTG+TGG | + | chr5_1:22428456-22428475 | Msa0724150:intron | 50.0% |
| CAACCTGTCGAACCATGGAA+CGG | - | chr5_1:22429052-22429071 | None:intergenic | 50.0% | |
| CAGTTCAACCTGTCGAACCA+TGG | - | chr5_1:22429057-22429076 | None:intergenic | 50.0% | |
| ! | GTTCGACAGGTTGAACTGTC+TGG | + | chr5_1:22429059-22429078 | Msa0724150:intron | 50.0% |
| ! | GTCAATAGGGGCATGTCTGT+TGG | + | chr5_1:22429864-22429883 | Msa0724150:intron | 50.0% |
| GTCATGAGCCTTAAGCACCA+AGG | + | chr5_1:22429969-22429988 | Msa0724150:intron | 50.0% | |
| GTCCCTATACTCTCAAGACG+TGG | - | chr5_1:22430154-22430173 | None:intergenic | 50.0% | |
| GGAAGGGTAGCCACTAAAAC+GGG | - | chr5_1:22430389-22430408 | None:intergenic | 50.0% | |
| TTACGACCCTGAAGGAGGAA+GGG | - | chr5_1:22430405-22430424 | None:intergenic | 50.0% | |
| TTTACGACCCTGAAGGAGGA+AGG | - | chr5_1:22430406-22430425 | None:intergenic | 50.0% | |
| TGTCTTTACGACCCTGAAGG+AGG | - | chr5_1:22430410-22430429 | None:intergenic | 50.0% | |
| CCTTCAGGGTCGTAAAGACA+CGG | + | chr5_1:22430410-22430429 | Msa0724150:intron | 50.0% | |
| CTTCAGGGTCGTAAAGACAC+GGG | + | chr5_1:22430411-22430430 | Msa0724150:intron | 50.0% | |
| ! | ACAGGGGCTTTAATCTCCAC+CGG | + | chr5_1:22430524-22430543 | Msa0724150:intron | 50.0% |
| !!! | CAGCCGCCTTCTTTTTTCTC+AGG | - | chr5_1:22431044-22431063 | None:intergenic | 50.0% |
| CTGGTTATGTTGCAGCAGGA+AGG | + | chr5_1:22431070-22431089 | Msa0724150:CDS | 50.0% | |
| GGTTATGTTGCAGCAGGAAG+GGG | + | chr5_1:22431072-22431091 | Msa0724150:CDS | 50.0% | |
| GAAGGGGTCAGACAAACTCT+CGG | + | chr5_1:22431088-22431107 | Msa0724150:CDS | 50.0% | |
| GGAGTTGACACACCCGCAAT+CGG | + | chr5_1:22428273-22428292 | Msa0724150:intron | 55.0% | |
| GCAGGAGTTAGACCGATTGC+GGG | - | chr5_1:22428288-22428307 | None:intergenic | 55.0% | |
| GAAGTCCTCACATTGGCAGC+AGG | - | chr5_1:22428306-22428325 | None:intergenic | 55.0% | |
| CTTTGAGCCCAGTGAACCCT+CGG | + | chr5_1:22428367-22428386 | Msa0724150:intron | 55.0% | |
| TTAGGCTCCGAGGGTTCACT+GGG | - | chr5_1:22428377-22428396 | None:intergenic | 55.0% | |
| GTTCCGTTCCATGGTTCGAC+AGG | + | chr5_1:22429046-22429065 | Msa0724150:intron | 55.0% | |
| GGGTAGCCACTAAAACGGGA+TGG | - | chr5_1:22430385-22430404 | None:intergenic | 55.0% | |
| TGGCTACCCTTCCTCCTTCA+GGG | + | chr5_1:22430396-22430415 | Msa0724150:intron | 55.0% | |
| CCGTGTCTTTACGACCCTGA+AGG | - | chr5_1:22430413-22430432 | None:intergenic | 55.0% | |
| ! | CAGGGGCTTTAATCTCCACC+GGG | + | chr5_1:22430525-22430544 | Msa0724150:intron | 55.0% |
| AGCGAACCCTCAAGCACTAC+AGG | - | chr5_1:22430610-22430629 | None:intergenic | 55.0% | |
| GTTAGGCTCCGAGGGTTCAC+TGG | - | chr5_1:22428378-22428397 | None:intergenic | 60.0% | |
| GCGGTCGTCACCTTCTAAGC+CGG | - | chr5_1:22430232-22430251 | None:intergenic | 60.0% | |
| GTGGCTACCCTTCCTCCTTC+AGG | + | chr5_1:22430395-22430414 | Msa0724150:intron | 60.0% | |
| AAGAAGGCGGCTGCCATGTC+TGG | + | chr5_1:22431051-22431070 | Msa0724150:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 22427504 | 22431376 | 22427504 | ID=Msa0724150;Name=Msa0724150 |
| chr5_1 | mRNA | 22427504 | 22431376 | 22427504 | ID=Msa0724150-mRNA-1;Parent=Msa0724150;Name=Msa0724150-mRNA-1;_AED=0.02;_eAED=0.02;_QI=113|1|1|1|1|1|4|260|219 |
| chr5_1 | exon | 22427504 | 22427714 | 22427504 | ID=Msa0724150-mRNA-1:exon:8453;Parent=Msa0724150-mRNA-1 |
| chr5_1 | exon | 22427837 | 22427969 | 22427837 | ID=Msa0724150-mRNA-1:exon:8454;Parent=Msa0724150-mRNA-1 |
| chr5_1 | exon | 22429258 | 22429566 | 22429258 | ID=Msa0724150-mRNA-1:exon:8455;Parent=Msa0724150-mRNA-1 |
| chr5_1 | exon | 22430997 | 22431376 | 22430997 | ID=Msa0724150-mRNA-1:exon:8456;Parent=Msa0724150-mRNA-1 |
| chr5_1 | five_prime_UTR | 22427504 | 22427616 | 22427504 | ID=Msa0724150-mRNA-1:five_prime_utr;Parent=Msa0724150-mRNA-1 |
| chr5_1 | CDS | 22427617 | 22427714 | 22427617 | ID=Msa0724150-mRNA-1:cds;Parent=Msa0724150-mRNA-1 |
| chr5_1 | CDS | 22427837 | 22427969 | 22427837 | ID=Msa0724150-mRNA-1:cds;Parent=Msa0724150-mRNA-1 |
| chr5_1 | CDS | 22429258 | 22429566 | 22429258 | ID=Msa0724150-mRNA-1:cds;Parent=Msa0724150-mRNA-1 |
| chr5_1 | CDS | 22430997 | 22431116 | 22430997 | ID=Msa0724150-mRNA-1:cds;Parent=Msa0724150-mRNA-1 |
| chr5_1 | three_prime_UTR | 22431117 | 22431376 | 22431117 | ID=Msa0724150-mRNA-1:three_prime_utr;Parent=Msa0724150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
