Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0056270 | XP_013465723.2 | 98.293 | 410 | 5 | 1 | 1 | 410 | 1 | 408 | 0.0 | 837 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0056270 | sp|Q8H1G5|REIL1_ARATH | 62.802 | 414 | 140 | 5 | 1 | 410 | 1 | 404 | 0.0 | 525 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0056270 | A0A396JF03 | 98.293 | 410 | 5 | 1 | 1 | 410 | 1 | 408 | 0.0 | 837 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002560 | Msa0056270 | 0.807662 | 4.530392e-50 | -8.615850e-47 |
| Msa0006880 | Msa0056270 | 0.831614 | 1.510678e-55 | -8.615850e-47 |
| Msa0007850 | Msa0056270 | 0.990604 | 1.970708e-183 | -8.615850e-47 |
| Msa0008200 | Msa0056270 | 0.810122 | 1.348690e-50 | -8.615850e-47 |
| Msa0010490 | Msa0056270 | 0.848949 | 4.422683e-60 | -8.615850e-47 |
| Msa0010500 | Msa0056270 | 0.848568 | 5.640952e-60 | -8.615850e-47 |
| Msa0020390 | Msa0056270 | 0.801675 | 8.051562e-49 | -8.615850e-47 |
| Msa0026660 | Msa0056270 | 0.827424 | 1.576437e-54 | -8.615850e-47 |
| Msa0029260 | Msa0056270 | 0.844608 | 6.803348e-59 | -8.615850e-47 |
| Msa0029630 | Msa0056270 | 0.813080 | 3.067089e-51 | -8.615850e-47 |
| Msa0030300 | Msa0056270 | 0.801880 | 7.307872e-49 | -8.615850e-47 |
| Msa0031510 | Msa0056270 | 0.801492 | 8.778675e-49 | -8.615850e-47 |
| Msa0033880 | Msa0056270 | 0.857678 | 1.386240e-62 | -8.615850e-47 |
| Msa0036370 | Msa0056270 | 0.808573 | 2.898792e-50 | -8.615850e-47 |
| Msa0038000 | Msa0056270 | 0.823364 | 1.441619e-53 | -8.615850e-47 |
| Msa0038440 | Msa0056270 | 0.813337 | 2.693576e-51 | -8.615850e-47 |
| Msa0041690 | Msa0056270 | 0.810762 | 9.812403e-51 | -8.615850e-47 |
| Msa0043860 | Msa0056270 | 0.810360 | 1.198301e-50 | -8.615850e-47 |
| Msa0047160 | Msa0056270 | 0.830883 | 2.285575e-55 | -8.615850e-47 |
| Msa0047250 | Msa0056270 | 0.809010 | 2.337636e-50 | -8.615850e-47 |
| Msa0053240 | Msa0056270 | 0.807021 | 6.194129e-50 | -8.615850e-47 |
| Msa0055100 | Msa0056270 | 0.826409 | 2.756204e-54 | -8.615850e-47 |
| Msa0055150 | Msa0056270 | 0.802487 | 5.481351e-49 | -8.615850e-47 |
| Msa0056270 | Msa0059950 | 0.816234 | 6.143764e-52 | -8.615850e-47 |
| Msa0056270 | Msa0068000 | 0.806579 | 7.681665e-50 | -8.615850e-47 |
| Msa0056270 | Msa0068020 | 0.840539 | 8.182462e-58 | -8.615850e-47 |
| Msa0056270 | Msa0074750 | 0.800836 | 1.195646e-48 | -8.615850e-47 |
| Msa0056270 | Msa0076780 | 0.827240 | 1.745154e-54 | -8.615850e-47 |
| Msa0056270 | Msa0077010 | 0.845476 | 3.966098e-59 | -8.615850e-47 |
| Msa0056270 | Msa0077900 | 0.836410 | 9.510210e-57 | -8.615850e-47 |
| Msa0056270 | Msa0093420 | 0.803819 | 2.905298e-49 | -8.615850e-47 |
| Msa0056270 | Msa0094470 | 0.802419 | 5.661040e-49 | -8.615850e-47 |
| Msa0056270 | Msa0095360 | 0.801238 | 9.896430e-49 | -8.615850e-47 |
| Msa0056270 | Msa0095770 | 0.807114 | 5.919847e-50 | -8.615850e-47 |
| Msa0056270 | Msa0097600 | 0.804435 | 2.162960e-49 | -8.615850e-47 |
| Msa0056270 | Msa0097950 | 0.849419 | 3.272576e-60 | -8.615850e-47 |
| Msa0056270 | Msa0098740 | 0.812509 | 4.091624e-51 | -8.615850e-47 |
| Msa0056270 | Msa0100800 | 0.808503 | 2.999120e-50 | -8.615850e-47 |
| Msa0056270 | Msa0101180 | 0.824748 | 6.823273e-54 | -8.615850e-47 |
| Msa0056270 | Msa0108870 | 0.837706 | 4.436093e-57 | -8.615850e-47 |
| Msa0056270 | Msa0113130 | 0.818623 | 1.779595e-52 | -8.615850e-47 |
| Msa0056270 | Msa0113240 | 0.838562 | 2.672140e-57 | -8.615850e-47 |
| Msa0056270 | Msa0115370 | 0.809546 | 1.793634e-50 | -8.615850e-47 |
| Msa0056270 | Msa0115460 | 0.808343 | 3.245242e-50 | -8.615850e-47 |
| Msa0056270 | Msa0116130 | 0.806934 | 6.462788e-50 | -8.615850e-47 |
| Msa0056270 | Msa0125450 | 0.813041 | 3.128160e-51 | -8.615850e-47 |
| Msa0056270 | Msa0126520 | 0.804804 | 1.811498e-49 | -8.615850e-47 |
| Msa0056270 | Msa0126770 | 0.831121 | 1.997785e-55 | -8.615850e-47 |
| Msa0056270 | Msa0126840 | 0.839884 | 1.213086e-57 | -8.615850e-47 |
| Msa0056270 | Msa0126880 | 0.833475 | 5.222036e-56 | -8.615850e-47 |
| Msa0056270 | Msa0127040 | 0.861594 | 9.190492e-64 | -8.615850e-47 |
| Msa0056270 | Msa0127850 | 0.860349 | 2.197831e-63 | -8.615850e-47 |
| Msa0056270 | Msa0131450 | 0.818250 | 2.161717e-52 | -8.615850e-47 |
| Msa0056270 | Msa0136120 | 0.843379 | 1.452969e-58 | -8.615850e-47 |
| Msa0056270 | Msa0142110 | 0.825401 | 4.781725e-54 | -8.615850e-47 |
| Msa0056270 | Msa0146080 | 0.821791 | 3.346725e-53 | -8.615850e-47 |
| Msa0056270 | Msa0146770 | 0.802915 | 4.472184e-49 | -8.615850e-47 |
| Msa0056270 | Msa0149440 | 0.838701 | 2.458947e-57 | -8.615850e-47 |
| Msa0056270 | Msa0165950 | 0.822586 | 2.188889e-53 | -8.615850e-47 |
| Msa0056270 | Msa0166750 | 0.844296 | 8.255192e-59 | -8.615850e-47 |
| Msa0056270 | Msa0169300 | 0.842759 | 2.124706e-58 | -8.615850e-47 |
| Msa0056270 | Msa0171850 | 0.824643 | 7.221488e-54 | -8.615850e-47 |
| Msa0056270 | Msa0174000 | 0.857448 | 1.620730e-62 | -8.615850e-47 |
| Msa0056270 | Msa0177210 | 0.808070 | 3.709905e-50 | -8.615850e-47 |
| Msa0056270 | Msa0177960 | 0.823544 | 1.308403e-53 | -8.615850e-47 |
| Msa0056270 | Msa0180020 | 0.810372 | 1.191352e-50 | -8.615850e-47 |
| Msa0056270 | Msa0183870 | 0.826357 | 2.835382e-54 | -8.615850e-47 |
| Msa0056270 | Msa0190590 | 0.815851 | 7.479626e-52 | -8.615850e-47 |
| Msa0056270 | Msa0221030 | 0.823924 | 1.065747e-53 | -8.615850e-47 |
| Msa0056270 | Msa0231100 | 0.816973 | 4.194964e-52 | -8.615850e-47 |
| Msa0056270 | Msa0233370 | 0.802488 | 5.478076e-49 | -8.615850e-47 |
| Msa0056270 | Msa0241830 | 0.809253 | 2.073488e-50 | -8.615850e-47 |
| Msa0056270 | Msa0244970 | 0.817779 | 2.762234e-52 | -8.615850e-47 |
| Msa0056270 | Msa0244980 | 0.860884 | 1.512609e-63 | -8.615850e-47 |
| Msa0056270 | Msa0245060 | 0.822052 | 2.911971e-53 | -8.615850e-47 |
| Msa0056270 | Msa0245430 | 0.819263 | 1.273168e-52 | -8.615850e-47 |
| Msa0056270 | Msa0245580 | 0.872004 | 4.436237e-67 | -8.615850e-47 |
| Msa0056270 | Msa0247060 | 0.848922 | 4.500698e-60 | -8.615850e-47 |
| Msa0056270 | Msa0262480 | 0.852468 | 4.524939e-61 | -8.615850e-47 |
| Msa0056270 | Msa0273650 | 0.801086 | 1.062659e-48 | -8.615850e-47 |
| Msa0056270 | Msa0274100 | 0.801164 | 1.024293e-48 | -8.615850e-47 |
| Msa0056270 | Msa0275360 | 0.840439 | 8.692137e-58 | -8.615850e-47 |
| Msa0056270 | Msa0280110 | 0.830548 | 2.760866e-55 | -8.615850e-47 |
| Msa0056270 | Msa0280430 | 0.817231 | 3.670282e-52 | -8.615850e-47 |
| Msa0056270 | Msa0283420 | 0.819886 | 9.175229e-53 | -8.615850e-47 |
| Msa0056270 | Msa0291520 | 0.855596 | 5.674958e-62 | -8.615850e-47 |
| Msa0056270 | Msa0295250 | 0.802862 | 4.586142e-49 | -8.615850e-47 |
| Msa0056270 | Msa0296250 | 0.821958 | 3.060854e-53 | -8.615850e-47 |
| Msa0056270 | Msa0296790 | 0.802600 | 5.194183e-49 | -8.615850e-47 |
| Msa0056270 | Msa0296920 | 0.803275 | 3.767194e-49 | -8.615850e-47 |
| Msa0056270 | Msa0300350 | 0.846077 | 2.724380e-59 | -8.615850e-47 |
| Msa0056270 | Msa0304660 | 0.803697 | 3.080033e-49 | -8.615850e-47 |
| Msa0056270 | Msa0315850 | 0.802394 | 5.729172e-49 | -8.615850e-47 |
| Msa0056270 | Msa0321690 | 0.806036 | 9.996247e-50 | -8.615850e-47 |
| Msa0056270 | Msa0324240 | 0.856431 | 3.233009e-62 | -8.615850e-47 |
| Msa0056270 | Msa0331700 | 0.802541 | 5.342243e-49 | -8.615850e-47 |
| Msa0056270 | Msa0348830 | 0.836025 | 1.191570e-56 | -8.615850e-47 |
| Msa0056270 | Msa0358770 | 0.806696 | 7.256494e-50 | -8.615850e-47 |
| Msa0056270 | Msa0359600 | 0.850861 | 1.290896e-60 | -8.615850e-47 |
| Msa0056270 | Msa0363060 | 0.855113 | 7.841901e-62 | -8.615850e-47 |
| Msa0056270 | Msa0372490 | 0.820505 | 6.621451e-53 | -8.615850e-47 |
| Msa0056270 | Msa0376280 | 0.837628 | 4.645561e-57 | -8.615850e-47 |
| Msa0056270 | Msa0376690 | 0.800034 | 1.741938e-48 | -8.615850e-47 |
| Msa0056270 | Msa0378970 | 0.800104 | 1.685370e-48 | -8.615850e-47 |
| Msa0056270 | Msa0384670 | 0.837944 | 3.853478e-57 | -8.615850e-47 |
| Msa0056270 | Msa0384880 | 0.843521 | 1.331218e-58 | -8.615850e-47 |
| Msa0056270 | Msa0413530 | 0.819803 | 9.585568e-53 | -8.615850e-47 |
| Msa0056270 | Msa0416960 | 0.817514 | 3.170934e-52 | -8.615850e-47 |
| Msa0056270 | Msa0419520 | 0.851671 | 7.623266e-61 | -8.615850e-47 |
| Msa0056270 | Msa0423750 | 0.812780 | 3.567904e-51 | -8.615850e-47 |
| Msa0056270 | Msa0432500 | 0.802843 | 4.627532e-49 | -8.615850e-47 |
| Msa0056270 | Msa0434570 | 0.801537 | 8.591806e-49 | -8.615850e-47 |
| Msa0056270 | Msa0434770 | 0.812835 | 3.471796e-51 | -8.615850e-47 |
| Msa0056270 | Msa0437020 | 0.803856 | 2.854986e-49 | -8.615850e-47 |
| Msa0056270 | Msa0439890 | 0.825297 | 5.061989e-54 | -8.615850e-47 |
| Msa0056270 | Msa0443390 | 0.825905 | 3.631956e-54 | -8.615850e-47 |
| Msa0056270 | Msa0456430 | 0.809466 | 1.866554e-50 | -8.615850e-47 |
| Msa0056270 | Msa0458060 | 0.814530 | 1.470205e-51 | -8.615850e-47 |
| Msa0056270 | Msa0465550 | 0.816969 | 4.203168e-52 | -8.615850e-47 |
| Msa0056270 | Msa0468490 | 0.815695 | 8.103946e-52 | -8.615850e-47 |
| Msa0056270 | Msa0474700 | 0.836588 | 8.569983e-57 | -8.615850e-47 |
| Msa0056270 | Msa0478580 | 0.820101 | 8.192693e-53 | -8.615850e-47 |
| Msa0056270 | Msa0479330 | 0.844700 | 6.426289e-59 | -8.615850e-47 |
| Msa0056270 | Msa0480780 | 0.810796 | 9.647588e-51 | -8.615850e-47 |
| Msa0056270 | Msa0505380 | 0.801462 | 8.902756e-49 | -8.615850e-47 |
| Msa0056270 | Msa0509120 | 0.827346 | 1.645875e-54 | -8.615850e-47 |
| Msa0056270 | Msa0511490 | 0.802319 | 5.934622e-49 | -8.615850e-47 |
| Msa0056270 | Msa0511770 | 0.814244 | 1.700720e-51 | -8.615850e-47 |
| Msa0056270 | Msa0512850 | 0.846035 | 2.796234e-59 | -8.615850e-47 |
| Msa0056270 | Msa0514180 | 0.812207 | 4.760609e-51 | -8.615850e-47 |
| Msa0056270 | Msa0516120 | 0.808892 | 2.476988e-50 | -8.615850e-47 |
| Msa0056270 | Msa0520660 | 0.815725 | 7.979220e-52 | -8.615850e-47 |
| Msa0056270 | Msa0531250 | 0.842023 | 3.331277e-58 | -8.615850e-47 |
| Msa0056270 | Msa0531650 | 0.802561 | 5.291378e-49 | -8.615850e-47 |
| Msa0056270 | Msa0534750 | 0.838184 | 3.344118e-57 | -8.615850e-47 |
| Msa0056270 | Msa0547990 | 0.808259 | 3.381579e-50 | -8.615850e-47 |
| Msa0056270 | Msa0550540 | 0.878090 | 3.720987e-69 | -8.615850e-47 |
| Msa0056270 | Msa0550570 | 0.888089 | 8.043031e-73 | -8.615850e-47 |
| Msa0056270 | Msa0556790 | 0.819199 | 1.316777e-52 | -8.615850e-47 |
| Msa0056270 | Msa0560500 | 0.828293 | 9.743125e-55 | -8.615850e-47 |
| Msa0056270 | Msa0561430 | 0.808678 | 2.751847e-50 | -8.615850e-47 |
| Msa0056270 | Msa0569780 | 0.822052 | 2.910609e-53 | -8.615850e-47 |
| Msa0056270 | Msa0579770 | 0.835948 | 1.246267e-56 | -8.615850e-47 |
| Msa0056270 | Msa0581280 | 0.801217 | 9.991347e-49 | -8.615850e-47 |
| Msa0056270 | Msa0588090 | 0.825195 | 5.351134e-54 | -8.615850e-47 |
| Msa0056270 | Msa0593700 | 0.867034 | 1.842134e-65 | -8.615850e-47 |
| Msa0056270 | Msa0600080 | 0.808762 | 2.641517e-50 | -8.615850e-47 |
| Msa0056270 | Msa0602370 | 0.808639 | 2.805180e-50 | -8.615850e-47 |
| Msa0056270 | Msa0609000 | 0.862835 | 3.824055e-64 | -8.615850e-47 |
| Msa0056270 | Msa0610390 | 0.813185 | 2.909256e-51 | -8.615850e-47 |
| Msa0056270 | Msa0612390 | 0.802649 | 5.074408e-49 | -8.615850e-47 |
| Msa0056270 | Msa0614510 | 0.813988 | 1.936465e-51 | -8.615850e-47 |
| Msa0056270 | Msa0615580 | 0.824676 | 7.094337e-54 | -8.615850e-47 |
| Msa0056270 | Msa0616640 | 0.825179 | 5.399036e-54 | -8.615850e-47 |
| Msa0056270 | Msa0618930 | 0.861292 | 1.136274e-63 | -8.615850e-47 |
| Msa0056270 | Msa0618950 | 0.809269 | 2.056796e-50 | -8.615850e-47 |
| Msa0056270 | Msa0619860 | 0.838583 | 2.638342e-57 | -8.615850e-47 |
| Msa0056270 | Msa0619920 | 0.820724 | 5.896844e-53 | -8.615850e-47 |
| Msa0056270 | Msa0623200 | 0.807779 | 4.278091e-50 | -8.615850e-47 |
| Msa0056270 | Msa0626940 | 0.819309 | 1.242425e-52 | -8.615850e-47 |
| Msa0056270 | Msa0628420 | 0.840545 | 8.151470e-58 | -8.615850e-47 |
| Msa0056270 | Msa0631350 | 0.802683 | 4.993678e-49 | -8.615850e-47 |
| Msa0056270 | Msa0633570 | 0.864290 | 1.352708e-64 | -8.615850e-47 |
| Msa0056270 | Msa0639490 | 0.843382 | 1.449924e-58 | -8.615850e-47 |
| Msa0056270 | Msa0644030 | 0.800617 | 1.325314e-48 | -8.615850e-47 |
| Msa0056270 | Msa0652300 | 0.812816 | 3.505028e-51 | -8.615850e-47 |
| Msa0056270 | Msa0652690 | 0.800909 | 1.155274e-48 | -8.615850e-47 |
| Msa0056270 | Msa0654870 | 0.835325 | 1.792057e-56 | -8.615850e-47 |
| Msa0056270 | Msa0656580 | 0.828862 | 7.099352e-55 | -8.615850e-47 |
| Msa0056270 | Msa0656810 | 0.827046 | 1.941655e-54 | -8.615850e-47 |
| Msa0056270 | Msa0659790 | 0.852421 | 4.669432e-61 | -8.615850e-47 |
| Msa0056270 | Msa0659990 | 0.842700 | 2.203067e-58 | -8.615850e-47 |
| Msa0056270 | Msa0662630 | 0.806458 | 8.146846e-50 | -8.615850e-47 |
| Msa0056270 | Msa0666230 | 0.836875 | 7.240347e-57 | -8.615850e-47 |
| Msa0056270 | Msa0669720 | 0.810488 | 1.124185e-50 | -8.615850e-47 |
| Msa0056270 | Msa0669760 | 0.803624 | 3.190450e-49 | -8.615850e-47 |
| Msa0056270 | Msa0679680 | 0.811256 | 7.666469e-51 | -8.615850e-47 |
| Msa0056270 | Msa0683780 | 0.817068 | 3.994926e-52 | -8.615850e-47 |
| Msa0056270 | Msa0687230 | 0.809958 | 1.462776e-50 | -8.615850e-47 |
| Msa0056270 | Msa0689440 | 0.845545 | 3.798336e-59 | -8.615850e-47 |
| Msa0056270 | Msa0693210 | 0.840617 | 7.806261e-58 | -8.615850e-47 |
| Msa0056270 | Msa0694840 | 0.824845 | 6.473289e-54 | -8.615850e-47 |
| Msa0056270 | Msa0694990 | 0.847039 | 1.487927e-59 | -8.615850e-47 |
| Msa0056270 | Msa0695130 | 0.817563 | 3.091136e-52 | -8.615850e-47 |
| Msa0056270 | Msa0697720 | 0.828918 | 6.882548e-55 | -8.615850e-47 |
| Msa0056270 | Msa0699190 | 0.834675 | 2.613448e-56 | -8.615850e-47 |
| Msa0056270 | Msa0705000 | 0.819597 | 1.068538e-52 | -8.615850e-47 |
| Msa0056270 | Msa0705040 | 0.829556 | 4.817468e-55 | -8.615850e-47 |
| Msa0056270 | Msa0705390 | 0.825565 | 4.373281e-54 | -8.615850e-47 |
| Msa0056270 | Msa0706390 | 0.864976 | 8.249384e-65 | -8.615850e-47 |
| Msa0056270 | Msa0706500 | 0.819676 | 1.024887e-52 | -8.615850e-47 |
| Msa0056270 | Msa0707390 | 0.828597 | 8.230579e-55 | -8.615850e-47 |
| Msa0056270 | Msa0712560 | 0.816333 | 5.836226e-52 | -8.615850e-47 |
| Msa0056270 | Msa0719420 | 0.813092 | 3.048389e-51 | -8.615850e-47 |
| Msa0056270 | Msa0720030 | 0.816934 | 4.280006e-52 | -8.615850e-47 |
| Msa0056270 | Msa0726080 | 0.816854 | 4.462605e-52 | -8.615850e-47 |
| Msa0056270 | Msa0729200 | 0.815205 | 1.041611e-51 | -8.615850e-47 |
| Msa0056270 | Msa0740600 | 0.804891 | 1.737205e-49 | -8.615850e-47 |
| Msa0056270 | Msa0743530 | 0.816820 | 4.541705e-52 | -8.615850e-47 |
| Msa0056270 | Msa0744090 | 0.805824 | 1.107450e-49 | -8.615850e-47 |
| Msa0056270 | Msa0744100 | 0.832419 | 9.554951e-56 | -8.615850e-47 |
| Msa0056270 | Msa0745200 | 0.801107 | 1.052624e-48 | -8.615850e-47 |
| Msa0056270 | Msa0746170 | 0.801289 | 9.658502e-49 | -8.615850e-47 |
| Msa0056270 | Msa0750920 | 0.818307 | 2.098787e-52 | -8.615850e-47 |
| Msa0056270 | Msa0752700 | 0.826248 | 3.010917e-54 | -8.615850e-47 |
| Msa0056270 | Msa0756930 | 0.806891 | 6.598953e-50 | -8.615850e-47 |
| Msa0056270 | Msa0766670 | 0.819703 | 1.010184e-52 | -8.615850e-47 |
| Msa0056270 | Msa0769590 | 0.821434 | 4.045721e-53 | -8.615850e-47 |
| Msa0056270 | Msa0774750 | 0.808626 | 2.823844e-50 | -8.615850e-47 |
| Msa0056270 | Msa0780880 | 0.808950 | 2.407281e-50 | -8.615850e-47 |
| Msa0056270 | Msa0781020 | 0.810482 | 1.127734e-50 | -8.615850e-47 |
| Msa0056270 | Msa0781270 | 0.831434 | 1.672823e-55 | -8.615850e-47 |
| Msa0056270 | Msa0785130 | 0.833988 | 3.885286e-56 | -8.615850e-47 |
| Msa0056270 | Msa0788120 | 0.830143 | 3.466158e-55 | -8.615850e-47 |
| Msa0056270 | Msa0789680 | 0.810222 | 1.283230e-50 | -8.615850e-47 |
| Msa0056270 | Msa0794050 | 0.819597 | 1.068538e-52 | -8.615850e-47 |
| Msa0056270 | Msa0794970 | 0.815838 | 7.528161e-52 | -8.615850e-47 |
| Msa0056270 | Msa0795660 | 0.800689 | 1.280896e-48 | -8.615850e-47 |
| Msa0056270 | Msa0796440 | 0.813891 | 2.034186e-51 | -8.615850e-47 |
| Msa0056270 | Msa0802410 | 0.803630 | 3.180228e-49 | -8.615850e-47 |
| Msa0056270 | Msa0806880 | 0.823966 | 1.042093e-53 | -8.615850e-47 |
| Msa0056270 | Msa0818770 | 0.833719 | 4.537678e-56 | -8.615850e-47 |
| Msa0056270 | Msa0819060 | 0.830625 | 2.642429e-55 | -8.615850e-47 |
| Msa0056270 | Msa0819540 | 0.834553 | 2.804846e-56 | -8.615850e-47 |
| Msa0056270 | Msa0822170 | 0.858666 | 7.042471e-63 | -8.615850e-47 |
| Msa0056270 | Msa0822180 | 0.838928 | 2.148420e-57 | -8.615850e-47 |
| Msa0056270 | Msa0825270 | 0.845240 | 4.593174e-59 | -8.615850e-47 |
| Msa0056270 | Msa0825280 | 0.811079 | 8.376365e-51 | -8.615850e-47 |
| Msa0056270 | Msa0828680 | 0.838279 | 3.159549e-57 | -8.615850e-47 |
| Msa0056270 | Msa0829220 | 0.815246 | 1.019695e-51 | -8.615850e-47 |
| Msa0056270 | Msa0831100 | 0.835317 | 1.800183e-56 | -8.615850e-47 |
| Msa0056270 | Msa0838370 | 0.871108 | 8.781222e-67 | -8.615850e-47 |
| Msa0056270 | Msa0839200 | 0.803980 | 2.690967e-49 | -8.615850e-47 |
| Msa0056270 | Msa0846230 | 0.811283 | 7.565018e-51 | -8.615850e-47 |
| Msa0056270 | Msa0851470 | 0.803045 | 4.204423e-49 | -8.615850e-47 |
| Msa0056270 | Msa0858440 | 0.888803 | 4.270831e-73 | -8.615850e-47 |
| Msa0056270 | Msa0859180 | 0.819259 | 1.275942e-52 | -8.615850e-47 |
| Msa0056270 | Msa0864420 | 0.817182 | 3.764836e-52 | -8.615850e-47 |
| Msa0056270 | Msa0880730 | 0.804125 | 2.509398e-49 | -8.615850e-47 |
| Msa0056270 | Msa0888940 | 0.820394 | 7.020743e-53 | -8.615850e-47 |
| Msa0056270 | Msa0897400 | 0.858863 | 6.151922e-63 | -8.615850e-47 |
| Msa0056270 | Msa0901450 | 0.833919 | 4.044165e-56 | -8.615850e-47 |
| Msa0056270 | Msa0913240 | 0.857224 | 1.887889e-62 | -8.615850e-47 |
| Msa0056270 | Msa0921870 | 0.831998 | 1.214805e-55 | -8.615850e-47 |
| Msa0056270 | Msa0928120 | 0.804411 | 2.187942e-49 | -8.615850e-47 |
| Msa0056270 | Msa0943170 | 0.833417 | 5.398719e-56 | -8.615850e-47 |
| Msa0056270 | Msa0944200 | 0.808705 | 2.716239e-50 | -8.615850e-47 |
| Msa0056270 | Msa0945240 | 0.811841 | 5.721189e-51 | -8.615850e-47 |
| Msa0056270 | Msa0960830 | 0.833866 | 4.168629e-56 | -8.615850e-47 |
| Msa0056270 | Msa0963020 | 0.902979 | 5.565728e-79 | -8.615850e-47 |
| Msa0056270 | Msa0968440 | 0.872582 | 2.847007e-67 | -8.615850e-47 |
| Msa0056270 | Msa0970600 | 0.818923 | 1.521443e-52 | -8.615850e-47 |
| Msa0056270 | Msa0973320 | 0.811947 | 5.426277e-51 | -8.615850e-47 |
| Msa0056270 | Msa0979810 | 0.811369 | 7.248058e-51 | -8.615850e-47 |
| Msa0056270 | Msa0980940 | 0.829580 | 4.753355e-55 | -8.615850e-47 |
| Msa0056270 | Msa0981430 | 0.837250 | 5.805559e-57 | -8.615850e-47 |
| Msa0056270 | Msa0994290 | 0.817808 | 2.721487e-52 | -8.615850e-47 |
| Msa0056270 | Msa0997430 | 0.821866 | 3.214634e-53 | -8.615850e-47 |
| Msa0056270 | Msa1001350 | 0.830931 | 2.223840e-55 | -8.615850e-47 |
| Msa0056270 | Msa1017510 | 0.878154 | 3.532294e-69 | -8.615850e-47 |
| Msa0056270 | Msa1019240 | 0.822472 | 2.326120e-53 | -8.615850e-47 |
| Msa0056270 | Msa1019260 | 0.809512 | 1.824047e-50 | -8.615850e-47 |
| Msa0056270 | Msa1025260 | 0.800958 | 1.128888e-48 | -8.615850e-47 |
| Msa0056270 | Msa1025940 | 0.886367 | 3.637436e-72 | -8.615850e-47 |
| Msa0056270 | Msa1027070 | 0.828221 | 1.013926e-54 | -8.615850e-47 |
| Msa0056270 | Msa1027250 | 0.813551 | 2.416934e-51 | -8.615850e-47 |
| Msa0056270 | Msa1029970 | 0.827635 | 1.403476e-54 | -8.615850e-47 |
| Msa0056270 | Msa1034720 | 0.822578 | 2.198068e-53 | -8.615850e-47 |
| Msa0056270 | Msa1036740 | 0.810977 | 8.813700e-51 | -8.615850e-47 |
| Msa0056270 | Msa1064560 | 0.821407 | 4.105528e-53 | -8.615850e-47 |
| Msa0056270 | Msa1070390 | 0.871931 | 4.691251e-67 | -8.615850e-47 |
| Msa0056270 | Msa1072710 | 0.852385 | 4.778528e-61 | -8.615850e-47 |
| Msa0056270 | Msa1083880 | 0.830799 | 2.395762e-55 | -8.615850e-47 |
| Msa0056270 | Msa1089270 | 0.820768 | 5.760853e-53 | -8.615850e-47 |
| Msa0056270 | Msa1089320 | 0.800734 | 1.254370e-48 | -8.615850e-47 |
| Msa0056270 | Msa1093330 | 0.825870 | 3.702568e-54 | -8.615850e-47 |
| Msa0056270 | Msa1104210 | 0.801950 | 7.068083e-49 | -8.615850e-47 |
| Msa0056270 | Msa1109780 | -0.808020 | 3.802653e-50 | -8.615850e-47 |
| Msa0056270 | Msa1122820 | 0.802395 | 5.725751e-49 | -8.615850e-47 |
| Msa0056270 | Msa1123350 | 0.844385 | 7.810816e-59 | -8.615850e-47 |
| Msa0056270 | Msa1123830 | 0.807273 | 5.478961e-50 | -8.615850e-47 |
| Msa0056270 | Msa1126830 | 0.801166 | 1.023686e-48 | -8.615850e-47 |
| Msa0056270 | Msa1126850 | 0.825243 | 5.211925e-54 | -8.615850e-47 |
| Msa0056270 | Msa1127540 | 0.800289 | 1.545351e-48 | -8.615850e-47 |
| Msa0056270 | Msa1127590 | 0.810194 | 1.301483e-50 | -8.615850e-47 |
| Msa0056270 | Msa1131560 | 0.810714 | 1.004909e-50 | -8.615850e-47 |
| Msa0056270 | Msa1133400 | 0.819764 | 9.784512e-53 | -8.615850e-47 |
| Msa0056270 | Msa1135800 | -0.815115 | 1.090352e-51 | -8.615850e-47 |
| Msa0056270 | Msa1135810 | -0.819175 | 1.333399e-52 | -8.615850e-47 |
| Msa0056270 | Msa1145240 | 0.834264 | 3.313691e-56 | -8.615850e-47 |
| Msa0056270 | Msa1154490 | 0.804744 | 1.864981e-49 | -8.615850e-47 |
| Msa0056270 | Msa1158230 | 0.844849 | 5.860023e-59 | -8.615850e-47 |
| Msa0056270 | Msa1163870 | 0.810283 | 1.244960e-50 | -8.615850e-47 |
| Msa0056270 | Msa1165780 | 0.839704 | 1.351399e-57 | -8.615850e-47 |
| Msa0056270 | Msa1166870 | 0.847700 | 9.796524e-60 | -8.615850e-47 |
| Msa0056270 | Msa1176980 | 0.834288 | 3.268210e-56 | -8.615850e-47 |
| Msa0056270 | Msa1178050 | 0.820533 | 6.522124e-53 | -8.615850e-47 |
| Msa0056270 | Msa1179950 | 0.864896 | 8.738200e-65 | -8.615850e-47 |
| Msa0056270 | Msa1179980 | 0.882830 | 7.495576e-71 | -8.615850e-47 |
| Msa0056270 | Msa1184370 | 0.830318 | 3.141858e-55 | -8.615850e-47 |
| Msa0056270 | Msa1188560 | 0.812627 | 3.855128e-51 | -8.615850e-47 |
| Msa0056270 | Msa1195300 | 0.838277 | 3.164274e-57 | -8.615850e-47 |
| Msa0056270 | Msa1201830 | 0.837101 | 6.339896e-57 | -8.615850e-47 |
| Msa0056270 | Msa1202580 | 0.824682 | 7.070048e-54 | -8.615850e-47 |
| Msa0056270 | Msa1205480 | 0.818619 | 1.783111e-52 | -8.615850e-47 |
| Msa0056270 | Msa1205850 | 0.821168 | 4.659022e-53 | -8.615850e-47 |
| Msa0056270 | Msa1206160 | 0.813775 | 2.157350e-51 | -8.615850e-47 |
| Msa0056270 | Msa1206650 | 0.838861 | 2.235589e-57 | -8.615850e-47 |
| Msa0056270 | Msa1207730 | 0.840057 | 1.093562e-57 | -8.615850e-47 |
| Msa0056270 | Msa1208020 | 0.811480 | 6.854249e-51 | -8.615850e-47 |
| Msa0056270 | Msa1211830 | 0.825187 | 5.373190e-54 | -8.615850e-47 |
| Msa0056270 | Msa1218500 | 0.807467 | 4.983955e-50 | -8.615850e-47 |
| Msa0056270 | Msa1226610 | 0.825531 | 4.456444e-54 | -8.615850e-47 |
| Msa0056270 | Msa1227690 | 0.842661 | 2.256309e-58 | -8.615850e-47 |
| Msa0056270 | Msa1233850 | 0.802074 | 6.667013e-49 | -8.615850e-47 |
| Msa0056270 | Msa1256770 | 0.817537 | 3.132697e-52 | -8.615850e-47 |
| Msa0056270 | Msa1264210 | 0.808686 | 2.741605e-50 | -8.615850e-47 |
| Msa0056270 | Msa1265630 | 0.830187 | 3.382689e-55 | -8.615850e-47 |
| Msa0056270 | Msa1270620 | 0.885755 | 6.186228e-72 | -8.615850e-47 |
| Msa0056270 | Msa1270690 | 0.882713 | 8.269113e-71 | -8.615850e-47 |
| Msa0056270 | Msa1278900 | 0.827206 | 1.777826e-54 | -8.615850e-47 |
| Msa0056270 | Msa1290450 | 0.808704 | 2.717923e-50 | -8.615850e-47 |
| Msa0056270 | Msa1294840 | 0.846637 | 1.916032e-59 | -8.615850e-47 |
| Msa0056270 | Msa1298100 | 0.806293 | 8.825579e-50 | -8.615850e-47 |
| Msa0056270 | Msa1299700 | 0.852744 | 3.775106e-61 | -8.615850e-47 |
| Msa0056270 | Msa1301750 | 0.808903 | 2.464268e-50 | -8.615850e-47 |
| Msa0056270 | Msa1302380 | 0.801826 | 7.497414e-49 | -8.615850e-47 |
| Msa0056270 | Msa1306990 | 0.871074 | 9.010984e-67 | -8.615850e-47 |
| Msa0056270 | Msa1307180 | 0.824181 | 9.275867e-54 | -8.615850e-47 |
| Msa0056270 | Msa1310690 | 0.800216 | 1.599178e-48 | -8.615850e-47 |
| Msa0056270 | Msa1316360 | 0.815006 | 1.153158e-51 | -8.615850e-47 |
| Msa0056270 | Msa1330270 | 0.807390 | 5.174509e-50 | -8.615850e-47 |
| Msa0056270 | Msa1331250 | 0.814532 | 1.468507e-51 | -8.615850e-47 |
| Msa0056270 | Msa1331710 | 0.827629 | 1.407368e-54 | -8.615850e-47 |
| Msa0056270 | Msa1332220 | 0.836877 | 7.231193e-57 | -8.615850e-47 |
| Msa0056270 | Msa1340830 | 0.841909 | 3.569192e-58 | -8.615850e-47 |
| Msa0056270 | Msa1343290 | 0.803230 | 3.849500e-49 | -8.615850e-47 |
| Msa0056270 | Msa1344310 | 0.837730 | 4.373791e-57 | -8.615850e-47 |
| Msa0056270 | Msa1349570 | 0.830827 | 2.358095e-55 | -8.615850e-47 |
| Msa0056270 | Msa1351540 | 0.817203 | 3.725260e-52 | -8.615850e-47 |
| Msa0056270 | Msa1352890 | 0.803692 | 3.087458e-49 | -8.615850e-47 |
| Msa0056270 | Msa1355700 | 0.829782 | 4.245414e-55 | -8.615850e-47 |
| Msa0056270 | Msa1356610 | 0.819573 | 1.082059e-52 | -8.615850e-47 |
| Msa0056270 | Msa1364160 | 0.817160 | 3.809285e-52 | -8.615850e-47 |
| Msa0056270 | Msa1364210 | 0.800968 | 1.123549e-48 | -8.615850e-47 |
| Msa0056270 | Msa1365860 | 0.816481 | 5.409457e-52 | -8.615850e-47 |
| Msa0056270 | Msa1369190 | 0.853796 | 1.885574e-61 | -8.615850e-47 |
| Msa0056270 | Msa1369490 | 0.805341 | 1.398954e-49 | -8.615850e-47 |
| Msa0056270 | Msa1369890 | 0.816150 | 6.415685e-52 | -8.615850e-47 |
| Msa0056270 | Msa1372310 | 0.803989 | 2.678302e-49 | -8.615850e-47 |
| Msa0056270 | Msa1374170 | 0.813471 | 2.517621e-51 | -8.615850e-47 |
| Msa0056270 | Msa1380970 | 0.817074 | 3.981709e-52 | -8.615850e-47 |
| Msa0056270 | Msa1382020 | 0.801249 | 9.843489e-49 | -8.615850e-47 |
| Msa0056270 | Msa1382670 | 0.817782 | 2.758621e-52 | -8.615850e-47 |
| Msa0056270 | Msa1383350 | 0.819223 | 1.300361e-52 | -8.615850e-47 |
| Msa0056270 | Msa1385810 | 0.844840 | 5.892193e-59 | -8.615850e-47 |
| Msa0056270 | Msa1389680 | 0.802121 | 6.518783e-49 | -8.615850e-47 |
| Msa0056270 | Msa1389850 | 0.805260 | 1.454393e-49 | -8.615850e-47 |
| Msa0056270 | Msa1393430 | 0.813663 | 2.283500e-51 | -8.615850e-47 |
| Msa0056270 | Msa1396870 | 0.813681 | 2.263184e-51 | -8.615850e-47 |
| Msa0056270 | Msa1401950 | 0.803980 | 2.689947e-49 | -8.615850e-47 |
| Msa0056270 | Msa1409260 | 0.853025 | 3.137928e-61 | -8.615850e-47 |
| Msa0056270 | Msa1411950 | 0.855014 | 8.381657e-62 | -8.615850e-47 |
| Msa0056270 | Msa1413500 | 0.819686 | 1.019472e-52 | -8.615850e-47 |
| Msa0056270 | Msa1416260 | 0.804550 | 2.047159e-49 | -8.615850e-47 |
| Msa0056270 | Msa1420660 | 0.810029 | 1.412507e-50 | -8.615850e-47 |
| Msa0056270 | Msa1421560 | 0.801090 | 1.060770e-48 | -8.615850e-47 |
| Msa0056270 | Msa1426920 | 0.811539 | 6.657180e-51 | -8.615850e-47 |
| Msa0056270 | Msa1433600 | 0.845557 | 3.771560e-59 | -8.615850e-47 |
| Msa0056270 | Msa1435440 | 0.843240 | 1.582043e-58 | -8.615850e-47 |
| Msa0056270 | Msa1435770 | 0.843578 | 1.285591e-58 | -8.615850e-47 |
| Msa0056270 | Msa1437330 | 0.802177 | 6.348765e-49 | -8.615850e-47 |
| Msa0056270 | Msa1438050 | 0.800493 | 1.404359e-48 | -8.615850e-47 |
| Msa0056270 | Msa1450280 | 0.802073 | 6.668980e-49 | -8.615850e-47 |
| Msa0056270 | Msa1450720 | 0.827002 | 1.989370e-54 | -8.615850e-47 |
| Msa0056270 | Msa1454680 | 0.821432 | 4.051142e-53 | -8.615850e-47 |
| Msa0056270 | Msa1458810 | 0.835960 | 1.238044e-56 | -8.615850e-47 |
| Msa0056270 | Msa1459960 | 0.824603 | 7.379877e-54 | -8.615850e-47 |
| Msa0056270 | Msa1462470 | 0.854063 | 1.578935e-61 | -8.615850e-47 |
| Msa0056270 | Msa1462860 | 0.837345 | 5.491182e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0056270 | MtrunA17_Chr1g0148041 | 98.293 | 410 | 5 | 1 | 1 | 410 | 1 | 408 | 0.0 | 837 |
| Msa0056270 | MtrunA17_Chr1g0169601 | 94.340 | 212 | 12 | 0 | 199 | 410 | 1 | 212 | 6.86e-139 | 395 |
| Msa0056270 | MtrunA17_Chr5g0424941 | 91.860 | 172 | 4 | 3 | 36 | 207 | 8 | 169 | 1.09e-106 | 311 |
| Msa0056270 | MtrunA17_Chr1g0169591 | 95.122 | 123 | 6 | 0 | 66 | 188 | 1 | 123 | 1.40e-55 | 179 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0056270 | AT4G31420.1 | 62.802 | 414 | 140 | 5 | 1 | 410 | 1 | 404 | 0.0 | 525 |
| Msa0056270 | AT4G31420.2 | 62.651 | 415 | 140 | 6 | 1 | 410 | 1 | 405 | 0.0 | 520 |
| Msa0056270 | AT2G24500.1 | 64.146 | 410 | 132 | 7 | 1 | 410 | 1 | 395 | 1.85e-180 | 508 |
Find 116 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATATTCCCATTGAGGTATT+TGG | 0.136590 | 1_2:-11797043 | Msa0056270:three_prime_UTR |
| AAATGAAAATGAAGAGAATT+AGG | 0.200575 | 1_2:+11800068 | None:intergenic |
| AAATAGGTGGCTGGGGTTCC+TGG | 0.262196 | 1_2:-11798647 | Msa0056270:intron |
| TGCTCGCTGTTTACATTTCA+AGG | 0.285959 | 1_2:-11797172 | Msa0056270:three_prime_UTR |
| CATTGCCGTTACTGCGGAAT+TGG | 0.292956 | 1_2:-11797506 | Msa0056270:CDS |
| TCACAATTTGCTGCCTTGAT+TGG | 0.324791 | 1_2:+11797330 | None:intergenic |
| TGACATTGTTTGGCAGGTTC+CGG | 0.326569 | 1_2:+11797228 | None:intergenic |
| TGTTTACCAGTGAAATTTCA+TGG | 0.333773 | 1_2:+11796832 | None:intergenic |
| GGCCCGCATCATATGAGTTC+TGG | 0.357386 | 1_2:+11798481 | None:intergenic |
| AATCACTGCAAGGTGCATTA+TGG | 0.365367 | 1_2:-11797893 | Msa0056270:CDS |
| AAAGGACTCCTCACTTATCT+TGG | 0.381564 | 1_2:-11798089 | Msa0056270:CDS |
| AAGGTACCGTTTGTGTTCAA+TGG | 0.392980 | 1_2:-11797076 | Msa0056270:three_prime_UTR |
| CATATAAAGTTAAGATATAT+CGG | 0.396675 | 1_2:+11796744 | None:intergenic |
| TTGAACACAAACGGTACCTT+TGG | 0.400851 | 1_2:+11797079 | None:intergenic |
| GACTAATATGTGACATTGTT+TGG | 0.402840 | 1_2:+11797218 | None:intergenic |
| AATGAAAATGAAGAGAATTA+GGG | 0.412020 | 1_2:+11800069 | None:intergenic |
| GGGAAGCAGCTAGTTGTATC+TGG | 0.418173 | 1_2:-11797676 | Msa0056270:CDS |
| CAGGTACAGGAGCATGGGTC+TGG | 0.422872 | 1_2:-11797360 | Msa0056270:CDS |
| TTCACAACGCGTTGTGGAAG+TGG | 0.423028 | 1_2:+11798416 | None:intergenic |
| TCTTTCAAATACTCAACATC+TGG | 0.426978 | 1_2:+11798116 | None:intergenic |
| CGATGAGGAGGAAGTTGAGT+TGG | 0.431117 | 1_2:-11797861 | Msa0056270:CDS |
| ACCAATCCAAATACCTCAAT+GGG | 0.438354 | 1_2:+11797037 | None:intergenic |
| AATATGTGACATTGTTTGGC+AGG | 0.441386 | 1_2:+11797222 | None:intergenic |
| GATAATATCGCAAGTATTCA+CGG | 0.442099 | 1_2:+11797560 | None:intergenic |
| GAGCATATGCGTAGCAAGAT+GGG | 0.442807 | 1_2:-11797269 | Msa0056270:CDS |
| AATTAGGGATTATATATAGT+TGG | 0.445089 | 1_2:+11800084 | None:intergenic |
| TCCCATTGAGGTATTTGGAT+TGG | 0.445608 | 1_2:-11797038 | Msa0056270:three_prime_UTR |
| GGTTGATTCTGATGATGATC+TGG | 0.452488 | 1_2:-11798324 | Msa0056270:CDS |
| TTGTTTGTTTGTCGGCGAAA+CGG | 0.461406 | 1_2:+11800133 | None:intergenic |
| AGATAAGTGAGGAGTCCTTT+CGG | 0.464465 | 1_2:+11798092 | None:intergenic |
| CTCGTAATCACTAAGATGTC+TGG | 0.465514 | 1_2:-11797613 | Msa0056270:CDS |
| AACCAATCCAAATACCTCAA+TGG | 0.466043 | 1_2:+11797036 | None:intergenic |
| GATGGATGATATAACGTGTT+TGG | 0.470292 | 1_2:-11796972 | Msa0056270:three_prime_UTR |
| GCTCGCTGTTTACATTTCAA+GGG | 0.475497 | 1_2:-11797171 | Msa0056270:three_prime_UTR |
| TCAGCAGCTTGGAAGCAGTC+AGG | 0.483122 | 1_2:-11797934 | Msa0056270:CDS |
| CTCTATAGCTGTGGCCTATG+TGG | 0.493641 | 1_2:-11798548 | Msa0056270:CDS |
| GCAATGTTATTTGCTGCTGA+TGG | 0.493721 | 1_2:+11797523 | None:intergenic |
| AAGGACTCCTCACTTATCTT+GGG | 0.494172 | 1_2:-11798088 | Msa0056270:CDS |
| ATCAGTTATGTTGATGAGCA+AGG | 0.498615 | 1_2:-11797697 | Msa0056270:intron |
| GATTATATATAGTTGGCTAT+AGG | 0.503671 | 1_2:+11800091 | None:intergenic |
| GTCATTCCATTGAACACAAA+CGG | 0.507472 | 1_2:+11797070 | None:intergenic |
| GGAGCATATGCGTAGCAAGA+TGG | 0.510156 | 1_2:-11797270 | Msa0056270:CDS |
| GTGTCATCCTTTCAGCAGCT+TGG | 0.510364 | 1_2:-11797945 | Msa0056270:CDS |
| ATGATGACAGCGAAGATGAA+TGG | 0.513343 | 1_2:-11798352 | Msa0056270:CDS |
| ATTGTGGTATCAACAGCATC+GGG | 0.516719 | 1_2:-11796994 | Msa0056270:three_prime_UTR |
| TTGAAGCAGATGAACAGATC+AGG | 0.519397 | 1_2:-11797296 | Msa0056270:CDS |
| TTATTTGCTGCTGATGGGCG+TGG | 0.519564 | 1_2:+11797529 | None:intergenic |
| GATTGTGGTATCAACAGCAT+CGG | 0.525059 | 1_2:-11796995 | Msa0056270:three_prime_UTR |
| AACAATGCTTCTGTCACTCC+AGG | 0.527586 | 1_2:+11798629 | None:intergenic |
| CAAGGGATACAAAAGTGAAA+AGG | 0.530314 | 1_2:-11798525 | Msa0056270:CDS |
| GGCCACAGCTATAGAGCATA+GGG | 0.531535 | 1_2:+11798555 | None:intergenic |
| AATTCTATGATTATACCAGC+AGG | 0.531778 | 1_2:-11797835 | Msa0056270:intron |
| CAATGTTATTTGCTGCTGAT+GGG | 0.534127 | 1_2:+11797524 | None:intergenic |
| AGCTTCATTACAAATCTGAA+TGG | 0.537834 | 1_2:-11799955 | Msa0056270:CDS |
| GTCTGGCCACTGTCCAATCA+AGG | 0.539255 | 1_2:-11797343 | Msa0056270:CDS |
| GTTCATATGCACAAGCATCA+TGG | 0.541183 | 1_2:-11798149 | Msa0056270:CDS |
| TAATTACCATGAAATTTCAC+TGG | 0.542764 | 1_2:-11796838 | Msa0056270:three_prime_UTR |
| GGCTTGTTCACAACGCGTTG+TGG | 0.544393 | 1_2:+11798410 | None:intergenic |
| CCTCACTTATCTTGGGCTGA+AGG | 0.545136 | 1_2:-11798081 | Msa0056270:intron |
| AATAATATAGAACTTAGTGA+TGG | 0.547640 | 1_2:-11797643 | Msa0056270:CDS |
| ATCATATACTATAATTACAC+TGG | 0.549253 | 1_2:-11796922 | Msa0056270:three_prime_UTR |
| CTCGCTGTTTACATTTCAAG+GGG | 0.549636 | 1_2:-11797170 | Msa0056270:three_prime_UTR |
| GGATGAAGAGTAATGTGATC+CGG | 0.550803 | 1_2:-11797247 | Msa0056270:CDS |
| AGATAGCCAGTCAGATGGGA+AGG | 0.554248 | 1_2:-11798450 | Msa0056270:CDS |
| AGGCCACAGCTATAGAGCAT+AGG | 0.556759 | 1_2:+11798554 | None:intergenic |
| TTATAGCCTTCCCATCTGAC+TGG | 0.557046 | 1_2:+11798444 | None:intergenic |
| TGATGACAGCGAAGATGAAT+GGG | 0.559525 | 1_2:-11798351 | Msa0056270:CDS |
| CATATGATGCGGGCCTCTGA+AGG | 0.561060 | 1_2:-11798473 | Msa0056270:CDS |
| AAGGAGATAGCCAGTCAGAT+GGG | 0.563189 | 1_2:-11798454 | Msa0056270:CDS |
| TAGCTGTGGCCTATGTGGCA+AGG | 0.563752 | 1_2:-11798543 | Msa0056270:CDS |
| AGCTGTGGCCTATGTGGCAA+GGG | 0.564127 | 1_2:-11798542 | Msa0056270:CDS |
| TCAGTTATGTTGATGAGCAA+GGG | 0.565263 | 1_2:-11797696 | Msa0056270:intron |
| TGCAGCCAATTCCGCAGTAA+CGG | 0.565856 | 1_2:+11797501 | None:intergenic |
| GTCCAGAACTCATATGATGC+GGG | 0.567214 | 1_2:-11798483 | Msa0056270:CDS |
| GAAGGAGATAGCCAGTCAGA+TGG | 0.569810 | 1_2:-11798455 | Msa0056270:CDS |
| GACACGATAAAGAGAGAATG+AGG | 0.575162 | 1_2:+11797196 | None:intergenic |
| TGATGATACCGTGATAATGA+TGG | 0.581227 | 1_2:-11796797 | Msa0056270:three_prime_UTR |
| GTCCATGTTCATATCTGTCA+AGG | 0.582115 | 1_2:+11798283 | None:intergenic |
| ATAATATAGAACTTAGTGAT+GGG | 0.585912 | 1_2:-11797642 | Msa0056270:CDS |
| GACATGGTATATTCCCATTG+AGG | 0.586007 | 1_2:-11797050 | Msa0056270:three_prime_UTR |
| AAGCTGCACTTGCTCAAGAG+AGG | 0.587647 | 1_2:-11798595 | Msa0056270:CDS |
| ATAATATCGCAAGTATTCAC+GGG | 0.591542 | 1_2:+11797561 | None:intergenic |
| TTACTGCGGAATTGGCTGCA+AGG | 0.592515 | 1_2:-11797498 | Msa0056270:intron |
| TGGTATCAACAGCATCGGGA+TGG | 0.594087 | 1_2:-11796990 | Msa0056270:three_prime_UTR |
| AGTTCTGGACTTAAGATGCT+CGG | 0.594295 | 1_2:+11798496 | None:intergenic |
| ACTGCTTCCAAGCTGCTGAA+AGG | 0.595871 | 1_2:+11797938 | None:intergenic |
| TGACTGGCTATCTCCTTCAG+AGG | 0.597575 | 1_2:+11798460 | None:intergenic |
| ACTTGATGCCATCATTATCA+CGG | 0.605089 | 1_2:+11796789 | None:intergenic |
| TGGTGATGATGACGATGAGG+AGG | 0.609158 | 1_2:-11797873 | Msa0056270:CDS |
| GTGATAATGATGGCATCAAG+TGG | 0.612733 | 1_2:-11796787 | Msa0056270:three_prime_UTR |
| AGCTGCACTTGCTCAAGAGA+GGG | 0.613236 | 1_2:-11798594 | Msa0056270:CDS |
| GCAGATGAACAGATCAGGTG+TGG | 0.616562 | 1_2:-11797291 | Msa0056270:CDS |
| TGTGTCTGTACTGCAACGAT+CGG | 0.620367 | 1_2:-11797967 | Msa0056270:CDS |
| TGAGGATGATGATGATGGTG+TGG | 0.620914 | 1_2:-11798234 | Msa0056270:CDS |
| CAAGCCTCCTCCTAAAAGAG+TGG | 0.623878 | 1_2:-11798393 | Msa0056270:CDS |
| AGCCCTATGCTCTATAGCTG+TGG | 0.631941 | 1_2:-11798557 | Msa0056270:CDS |
| TGAAAATGATGACATGGATG+AGG | 0.635872 | 1_2:-11798252 | Msa0056270:CDS |
| TCGCTACAATCTCAAACGCA+AGG | 0.638657 | 1_2:-11799930 | Msa0056270:intron |
| ATGGATGAGGATGATGATGA+TGG | 0.639127 | 1_2:-11798239 | Msa0056270:CDS |
| AGTCCAGAACTCATATGATG+CGG | 0.639377 | 1_2:-11798484 | Msa0056270:CDS |
| TTTCTGTCATAAGCATCCAA+AGG | 0.644347 | 1_2:-11797095 | Msa0056270:three_prime_UTR |
| GAATGCTGAAAATGATGACA+TGG | 0.644358 | 1_2:-11798258 | Msa0056270:CDS |
| AGCATATGCGTAGCAAGATG+GGG | 0.651281 | 1_2:-11797268 | Msa0056270:CDS |
| AAATAACATTGCCGTTACTG+CGG | 0.661600 | 1_2:-11797512 | Msa0056270:CDS |
| CAGCGAAGATGAATGGGTGG+AGG | 0.662429 | 1_2:-11798345 | Msa0056270:CDS |
| CAAAACAATAGAAAACTGCA+TGG | 0.674368 | 1_2:-11798171 | Msa0056270:CDS |
| TTGCTGCCTTGATTGGACAG+TGG | 0.675930 | 1_2:+11797337 | None:intergenic |
| CCTTCAGCCCAAGATAAGTG+AGG | 0.679666 | 1_2:+11798081 | None:intergenic |
| GAGTATTTGAAAGATCCGAA+AGG | 0.680398 | 1_2:-11798107 | Msa0056270:CDS |
| GGTGAAGATTGAACGAACGA+AGG | 0.683089 | 1_2:+11800154 | None:intergenic |
| GTCCTTGACAGATATGAACA+TGG | 0.683684 | 1_2:-11798285 | Msa0056270:CDS |
| TGACAGCGAAGATGAATGGG+TGG | 0.689914 | 1_2:-11798348 | Msa0056270:CDS |
| TTGTGTTCAATGGAATGACA+TGG | 0.707216 | 1_2:-11797066 | Msa0056270:three_prime_UTR |
| GGAAGCAGTCAGGAAACACA+TGG | 0.712768 | 1_2:-11797924 | Msa0056270:CDS |
| TCACACATAAAACAACACGA+TGG | 0.725722 | 1_2:+11798203 | None:intergenic |
| TTATGGTGATGATGACGATG+AGG | 0.730109 | 1_2:-11797876 | Msa0056270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGATAATTTATTTATAAGT+TGG | - | chr1_2:11796974-11796993 | Msa0056270:three_prime_UTR | 10.0% |
| !!! | AATTATTTTTGTTTGTTTGT+CGG | + | chr1_2:11796727-11796746 | None:intergenic | 15.0% |
| !!! | ATTTATTTATAAGTTGGATT+TGG | - | chr1_2:11796980-11796999 | Msa0056270:three_prime_UTR | 15.0% |
| !!! | TTTATATTCTGAAAATATAG+AGG | - | chr1_2:11798147-11798166 | Msa0056270:CDS | 15.0% |
| !!! | TTCACTTTTGAAAAATAAAT+AGG | - | chr1_2:11798186-11798205 | Msa0056270:CDS | 15.0% |
| !!! | ATCAAACATATTCTTTTTTT+GGG | + | chr1_2:11798808-11798827 | None:intergenic | 15.0% |
| !!! | AATCAAACATATTCTTTTTT+TGG | + | chr1_2:11798809-11798828 | None:intergenic | 15.0% |
| !! | AAAAAAGAATATGTTTGATT+TGG | - | chr1_2:11798809-11798828 | Msa0056270:intron | 15.0% |
| !! | TAACTGATAAAAAGAATATT+AGG | + | chr1_2:11799140-11799159 | None:intergenic | 15.0% |
| !! | CATATAAAGTTAAGATATAT+CGG | + | chr1_2:11800108-11800127 | None:intergenic | 15.0% |
| !! | AATTAGGGATTATATATAGT+TGG | + | chr1_2:11796768-11796787 | None:intergenic | 20.0% |
| !! | AATGAAAATGAAGAGAATTA+GGG | + | chr1_2:11796783-11796802 | None:intergenic | 20.0% |
| !! | AAATGAAAATGAAGAGAATT+AGG | + | chr1_2:11796784-11796803 | None:intergenic | 20.0% |
| !!! | GATGTATCATAATATTGATT+CGG | - | chr1_2:11797163-11797182 | Msa0056270:three_prime_UTR | 20.0% |
| !!! | ATGTATCATAATATTGATTC+GGG | - | chr1_2:11797164-11797183 | Msa0056270:three_prime_UTR | 20.0% |
| !!! | GGTTATAAGTTGTTTTTATA+AGG | - | chr1_2:11797335-11797354 | Msa0056270:CDS | 20.0% |
| !!! | AAAGCTATTTCAATTACAAA+AGG | + | chr1_2:11797666-11797685 | None:intergenic | 20.0% |
| !!! | ATTAAGTTGTTTATCCAAAA+AGG | - | chr1_2:11797701-11797720 | Msa0056270:intron | 20.0% |
| !!! | TTAAGTTGTTTATCCAAAAA+GGG | - | chr1_2:11797702-11797721 | Msa0056270:intron | 20.0% |
| !!! | ATAAGTTTTGTGATAATGTT+TGG | - | chr1_2:11797848-11797867 | Msa0056270:CDS | 20.0% |
| !!! | ACTTTTGAAAAATAAATAGG+TGG | - | chr1_2:11798189-11798208 | Msa0056270:CDS | 20.0% |
| !! | TTTATATCCAATGTATCAAT+AGG | + | chr1_2:11799106-11799125 | None:intergenic | 20.0% |
| !! | AATAATATAGAACTTAGTGA+TGG | - | chr1_2:11799206-11799225 | Msa0056270:intron | 20.0% |
| !! | ATAATATAGAACTTAGTGAT+GGG | - | chr1_2:11799207-11799226 | Msa0056270:intron | 20.0% |
| !!! | GATGAATATCTTAATTTTTC+AGG | - | chr1_2:11799470-11799489 | Msa0056270:intron | 20.0% |
| !! | ATCATATACTATAATTACAC+TGG | - | chr1_2:11799927-11799946 | Msa0056270:intron | 20.0% |
| !!! | ATCTTATGATACTATGTTTT+TGG | - | chr1_2:11799966-11799985 | Msa0056270:CDS | 20.0% |
| ! | GATTATATATAGTTGGCTAT+AGG | + | chr1_2:11796761-11796780 | None:intergenic | 25.0% |
| !!! | ACATTGTTTTTTTGATTGCT+TGG | + | chr1_2:11796820-11796839 | None:intergenic | 25.0% |
| ! | TTCACAGATATCAACAAAAA+TGG | + | chr1_2:11797088-11797107 | None:intergenic | 25.0% |
| ! | TTGTTATATACCTTTGTTGA+TGG | - | chr1_2:11797116-11797135 | Msa0056270:three_prime_UTR | 25.0% |
| ! | TGTTATATACCTTTGTTGAT+GGG | - | chr1_2:11797117-11797136 | Msa0056270:three_prime_UTR | 25.0% |
| !! | ACGTTGTATTGTTATTGTAT+AGG | - | chr1_2:11797314-11797333 | Msa0056270:CDS | 25.0% |
| !!! | GTTGTTTTTATAAGGTCTAT+TGG | - | chr1_2:11797343-11797362 | Msa0056270:CDS | 25.0% |
| ! | TTTCATAAGTTCTCCAAAAT+AGG | - | chr1_2:11797591-11797610 | Msa0056270:CDS | 25.0% |
| !! | ACTGTTTTCATAACCTATTT+TGG | + | chr1_2:11797607-11797626 | None:intergenic | 25.0% |
| !!! | ACGTACAATTGTTTTTGTAT+AGG | + | chr1_2:11797959-11797978 | None:intergenic | 25.0% |
| !! | TCTATAGGGGTAATTTTAAA+AGG | + | chr1_2:11799073-11799092 | None:intergenic | 25.0% |
| ! | AAAAAATCAACTAGAACTCT+AGG | - | chr1_2:11799263-11799282 | Msa0056270:intron | 25.0% |
| ! | ATTAAACAGAAAATAGAGTG+CGG | + | chr1_2:11799393-11799412 | None:intergenic | 25.0% |
| !! | TATTTTCTGTTTAATGCTGT+GGG | - | chr1_2:11799398-11799417 | Msa0056270:intron | 25.0% |
| !!! | TATCTTAATTTTTCAGGTAC+AGG | - | chr1_2:11799476-11799495 | Msa0056270:intron | 25.0% |
| !!! | TGTTTCTTTGTTTTTGATTG+TGG | - | chr1_2:11799839-11799858 | Msa0056270:intron | 25.0% |
| ! | TAATTACCATGAAATTTCAC+TGG | - | chr1_2:11800011-11800030 | Msa0056270:CDS | 25.0% |
| GCAATCAAAAAAACAATGTC+AGG | - | chr1_2:11796821-11796840 | Msa0056270:three_prime_UTR | 30.0% | |
| AGCTTCATTACAAATCTGAA+TGG | - | chr1_2:11796894-11796913 | Msa0056270:three_prime_UTR | 30.0% | |
| GTTATATACCTTTGTTGATG+GGG | - | chr1_2:11797118-11797137 | Msa0056270:three_prime_UTR | 30.0% | |
| ATTCGGGTATGATTATGTAT+AGG | - | chr1_2:11797180-11797199 | Msa0056270:three_prime_UTR | 30.0% | |
| TTCGGGTATGATTATGTATA+GGG | - | chr1_2:11797181-11797200 | Msa0056270:three_prime_UTR | 30.0% | |
| CTCAATAAGCCAATCTAAAA+GGG | - | chr1_2:11797471-11797490 | Msa0056270:intron | 30.0% | |
| GTAAATAAACCAATCCAAAC+AGG | + | chr1_2:11797506-11797525 | None:intergenic | 30.0% | |
| ! | GGAGAATTTTTGTAGGATTA+GGG | - | chr1_2:11797788-11797807 | Msa0056270:intron | 30.0% |
| ATAATGTTTGGTAGAACTGT+TGG | - | chr1_2:11797860-11797879 | Msa0056270:CDS | 30.0% | |
| ATAGGTTATAAGTTGTCTAC+TGG | + | chr1_2:11797941-11797960 | None:intergenic | 30.0% | |
| AATAAGCTGTTTATCCAAAC+AGG | - | chr1_2:11798062-11798081 | Msa0056270:intron | 30.0% | |
| CTTCACAACTACAAAACTAA+GGG | + | chr1_2:11798088-11798107 | None:intergenic | 30.0% | |
| TTGAAAAATAAATAGGTGGC+TGG | - | chr1_2:11798193-11798212 | Msa0056270:CDS | 30.0% | |
| TGAAAAATAAATAGGTGGCT+GGG | - | chr1_2:11798194-11798213 | Msa0056270:CDS | 30.0% | |
| CAAAACAATAGAAAACTGCA+TGG | - | chr1_2:11798678-11798697 | Msa0056270:intron | 30.0% | |
| TCTTTCAAATACTCAACATC+TGG | + | chr1_2:11798736-11798755 | None:intergenic | 30.0% | |
| !!! | CATATTCTTTTTTTGGGAGA+GGG | + | chr1_2:11798802-11798821 | None:intergenic | 30.0% |
| !!! | ACATATTCTTTTTTTGGGAG+AGG | + | chr1_2:11798803-11798822 | None:intergenic | 30.0% |
| CTAATATCTTCCCAATTTGT+AGG | - | chr1_2:11798844-11798863 | Msa0056270:intron | 30.0% | |
| ! | TCTCTTTTGACCTACAAATT+GGG | + | chr1_2:11798857-11798876 | None:intergenic | 30.0% |
| AATTCTATGATTATACCAGC+AGG | - | chr1_2:11799014-11799033 | Msa0056270:intron | 30.0% | |
| ATAATATCGCAAGTATTCAC+GGG | + | chr1_2:11799291-11799310 | None:intergenic | 30.0% | |
| GATAATATCGCAAGTATTCA+CGG | + | chr1_2:11799292-11799311 | None:intergenic | 30.0% | |
| TTAAACAGAAAATAGAGTGC+GGG | + | chr1_2:11799392-11799411 | None:intergenic | 30.0% | |
| ! | CTATTTTCTGTTTAATGCTG+TGG | - | chr1_2:11799397-11799416 | Msa0056270:intron | 30.0% |
| ! | ATTTTCTGTTTAATGCTGTG+GGG | - | chr1_2:11799399-11799418 | Msa0056270:intron | 30.0% |
| AGATATTCATCCATATTACC+AGG | + | chr1_2:11799461-11799480 | None:intergenic | 30.0% | |
| GACTAATATGTGACATTGTT+TGG | + | chr1_2:11799634-11799653 | None:intergenic | 30.0% | |
| ! | TATATTCCCATTGAGGTATT+TGG | - | chr1_2:11799806-11799825 | Msa0056270:intron | 30.0% |
| TGTTTACCAGTGAAATTTCA+TGG | + | chr1_2:11800020-11800039 | None:intergenic | 30.0% | |
| !! | GCGTACAAGTCTTTGAAATT+AGG | - | chr1_2:11797042-11797061 | Msa0056270:three_prime_UTR | 35.0% |
| !! | AGGGTAAATTTGTTATGGGT+AGG | - | chr1_2:11797141-11797160 | Msa0056270:three_prime_UTR | 35.0% |
| GATTATGTATAGGGCATGTT+TGG | - | chr1_2:11797190-11797209 | Msa0056270:three_prime_UTR | 35.0% | |
| !! | GAACTTTTGGAAACAGCTTA+TGG | + | chr1_2:11797410-11797429 | None:intergenic | 35.0% |
| !! | ATGCTGTTTGGTAGAACTTT+TGG | + | chr1_2:11797423-11797442 | None:intergenic | 35.0% |
| CATGAGTTTATGATGCTGTT+TGG | + | chr1_2:11797435-11797454 | None:intergenic | 35.0% | |
| GCTCAATAAGCCAATCTAAA+AGG | - | chr1_2:11797470-11797489 | Msa0056270:intron | 35.0% | |
| ! | AGTAGAGGGAGAATTTTTGT+AGG | - | chr1_2:11797781-11797800 | Msa0056270:intron | 35.0% |
| ! | GGGAGAATTTTTGTAGGATT+AGG | - | chr1_2:11797787-11797806 | Msa0056270:intron | 35.0% |
| CCTTCACAACTACAAAACTA+AGG | + | chr1_2:11798089-11798108 | None:intergenic | 35.0% | |
| !!! | CCTTAGTTTTGTAGTTGTGA+AGG | - | chr1_2:11798086-11798105 | Msa0056270:CDS | 35.0% |
| !!! | TAGTTTTGTAGTTGTGAAGG+AGG | - | chr1_2:11798089-11798108 | Msa0056270:CDS | 35.0% |
| GAAAAATAAATAGGTGGCTG+GGG | - | chr1_2:11798195-11798214 | Msa0056270:CDS | 35.0% | |
| CAAGGGATACAAAAGTGAAA+AGG | - | chr1_2:11798324-11798343 | Msa0056270:CDS | 35.0% | |
| ! | TTATCAACCACTCTTTTAGG+AGG | + | chr1_2:11798466-11798485 | None:intergenic | 35.0% |
| ! | GAGTTATCAACCACTCTTTT+AGG | + | chr1_2:11798469-11798488 | None:intergenic | 35.0% |
| GAATGCTGAAAATGATGACA+TGG | - | chr1_2:11798591-11798610 | Msa0056270:CDS | 35.0% | |
| TGAAAATGATGACATGGATG+AGG | - | chr1_2:11798597-11798616 | Msa0056270:CDS | 35.0% | |
| TCACACATAAAACAACACGA+TGG | + | chr1_2:11798649-11798668 | None:intergenic | 35.0% | |
| GAGTATTTGAAAGATCCGAA+AGG | - | chr1_2:11798742-11798761 | Msa0056270:intron | 35.0% | |
| ! | GTCTCTTTTGACCTACAAAT+TGG | + | chr1_2:11798858-11798877 | None:intergenic | 35.0% |
| TTACCCCTATAGAATCTGTA+AGG | - | chr1_2:11799080-11799099 | Msa0056270:intron | 35.0% | |
| TAGGCCTTACAGATTCTATA+GGG | + | chr1_2:11799087-11799106 | None:intergenic | 35.0% | |
| ATAGGCCTTACAGATTCTAT+AGG | + | chr1_2:11799088-11799107 | None:intergenic | 35.0% | |
| TGTAAGGCCTATTGATACAT+TGG | - | chr1_2:11799096-11799115 | Msa0056270:intron | 35.0% | |
| ! | ATCAGTTATGTTGATGAGCA+AGG | - | chr1_2:11799152-11799171 | Msa0056270:intron | 35.0% |
| ! | TCAGTTATGTTGATGAGCAA+GGG | - | chr1_2:11799153-11799172 | Msa0056270:intron | 35.0% |
| ! | CAATGTTATTTGCTGCTGAT+GGG | + | chr1_2:11799328-11799347 | None:intergenic | 35.0% |
| AAATAACATTGCCGTTACTG+CGG | - | chr1_2:11799337-11799356 | Msa0056270:intron | 35.0% | |
| ATCATTGTCACCTGGTAATA+TGG | - | chr1_2:11799448-11799467 | Msa0056270:intron | 35.0% | |
| AATATGTGACATTGTTTGGC+AGG | + | chr1_2:11799630-11799649 | None:intergenic | 35.0% | |
| TTTCTGTCATAAGCATCCAA+AGG | - | chr1_2:11799754-11799773 | Msa0056270:intron | 35.0% | |
| GTCATTCCATTGAACACAAA+CGG | + | chr1_2:11799782-11799801 | None:intergenic | 35.0% | |
| TTGTGTTCAATGGAATGACA+TGG | - | chr1_2:11799783-11799802 | Msa0056270:intron | 35.0% | |
| ACCAATCCAAATACCTCAAT+GGG | + | chr1_2:11799815-11799834 | None:intergenic | 35.0% | |
| AACCAATCCAAATACCTCAA+TGG | + | chr1_2:11799816-11799835 | None:intergenic | 35.0% | |
| GATGGATGATATAACGTGTT+TGG | - | chr1_2:11799877-11799896 | Msa0056270:intron | 35.0% | |
| !! | GTTTGGTTGATGCAATTTTG+CGG | - | chr1_2:11799894-11799913 | Msa0056270:intron | 35.0% |
| !!! | TTTTTGGTTGATGCAACTGT+GGG | - | chr1_2:11799982-11800001 | Msa0056270:CDS | 35.0% |
| ! | TGATGATACCGTGATAATGA+TGG | - | chr1_2:11800052-11800071 | Msa0056270:five_prime_UTR | 35.0% |
| ACTTGATGCCATCATTATCA+CGG | + | chr1_2:11800063-11800082 | None:intergenic | 35.0% | |
| TTGTTTGTTTGTCGGCGAAA+CGG | + | chr1_2:11796719-11796738 | None:intergenic | 40.0% | |
| ! | ATATACCTTTGTTGATGGGG+AGG | - | chr1_2:11797121-11797140 | Msa0056270:three_prime_UTR | 40.0% |
| ! | TATACCTTTGTTGATGGGGA+GGG | - | chr1_2:11797122-11797141 | Msa0056270:three_prime_UTR | 40.0% |
| !! | TGGGGAGGGTAAATTTGTTA+TGG | - | chr1_2:11797136-11797155 | Msa0056270:three_prime_UTR | 40.0% |
| !! | GGGGAGGGTAAATTTGTTAT+GGG | - | chr1_2:11797137-11797156 | Msa0056270:three_prime_UTR | 40.0% |
| CCAATCTAAAAGGGCTCATA+GGG | - | chr1_2:11797480-11797499 | Msa0056270:intron | 40.0% | |
| TCGAATAAGCCAATCCAAAC+GGG | + | chr1_2:11797814-11797833 | None:intergenic | 40.0% | |
| CTCGAATAAGCCAATCCAAA+CGG | + | chr1_2:11797815-11797834 | None:intergenic | 40.0% | |
| GAACTGTTGGAAGTAGCTTA+TGG | - | chr1_2:11797873-11797892 | Msa0056270:CDS | 40.0% | |
| TACAAAACTAAGGGCCTGTT+TGG | + | chr1_2:11798079-11798098 | None:intergenic | 40.0% | |
| TGTAGTTGTGAAGGAGGATT+TGG | - | chr1_2:11798095-11798114 | Msa0056270:CDS | 40.0% | |
| ! | TTTTGTATCCCTTGCCACAT+AGG | + | chr1_2:11798318-11798337 | None:intergenic | 40.0% |
| !! | AGTTCTGGACTTAAGATGCT+CGG | + | chr1_2:11798356-11798375 | None:intergenic | 40.0% |
| AGTCCAGAACTCATATGATG+CGG | - | chr1_2:11798365-11798384 | Msa0056270:CDS | 40.0% | |
| ATGATGACAGCGAAGATGAA+TGG | - | chr1_2:11798497-11798516 | Msa0056270:CDS | 40.0% | |
| TGATGACAGCGAAGATGAAT+GGG | - | chr1_2:11798498-11798517 | Msa0056270:CDS | 40.0% | |
| ! | GGTTGATTCTGATGATGATC+TGG | - | chr1_2:11798525-11798544 | Msa0056270:CDS | 40.0% |
| GTCCTTGACAGATATGAACA+TGG | - | chr1_2:11798564-11798583 | Msa0056270:CDS | 40.0% | |
| GTCCATGTTCATATCTGTCA+AGG | + | chr1_2:11798569-11798588 | None:intergenic | 40.0% | |
| ! | ATGGATGAGGATGATGATGA+TGG | - | chr1_2:11798610-11798629 | Msa0056270:CDS | 40.0% |
| GTTCATATGCACAAGCATCA+TGG | - | chr1_2:11798700-11798719 | Msa0056270:intron | 40.0% | |
| AGATAAGTGAGGAGTCCTTT+CGG | + | chr1_2:11798760-11798779 | None:intergenic | 40.0% | |
| AAAGGACTCCTCACTTATCT+TGG | - | chr1_2:11798760-11798779 | Msa0056270:intron | 40.0% | |
| AAGGACTCCTCACTTATCTT+GGG | - | chr1_2:11798761-11798780 | Msa0056270:intron | 40.0% | |
| AATCACTGCAAGGTGCATTA+TGG | - | chr1_2:11798956-11798975 | Msa0056270:intron | 40.0% | |
| ! | TTATGGTGATGATGACGATG+AGG | - | chr1_2:11798973-11798992 | Msa0056270:intron | 40.0% |
| AATGAATCGAACAAACCTGC+TGG | + | chr1_2:11799032-11799051 | None:intergenic | 40.0% | |
| AGGCCTTACAGATTCTATAG+GGG | + | chr1_2:11799086-11799105 | None:intergenic | 40.0% | |
| CTCGTAATCACTAAGATGTC+TGG | - | chr1_2:11799236-11799255 | Msa0056270:intron | 40.0% | |
| ! | GCAATGTTATTTGCTGCTGA+TGG | + | chr1_2:11799329-11799348 | None:intergenic | 40.0% |
| !! | GTGACAATGATTTGCTGAAG+TGG | + | chr1_2:11799439-11799458 | None:intergenic | 40.0% |
| TTCAGCAAATCATTGTCACC+TGG | - | chr1_2:11799440-11799459 | Msa0056270:intron | 40.0% | |
| !!! | ATTTTTCAGGTACAGGAGCA+TGG | - | chr1_2:11799483-11799502 | Msa0056270:intron | 40.0% |
| !!! | TTTTTCAGGTACAGGAGCAT+GGG | - | chr1_2:11799484-11799503 | Msa0056270:intron | 40.0% |
| !! | TCACAATTTGCTGCCTTGAT+TGG | + | chr1_2:11799522-11799541 | None:intergenic | 40.0% |
| TTGAAGCAGATGAACAGATC+AGG | - | chr1_2:11799553-11799572 | Msa0056270:intron | 40.0% | |
| GGATGAAGAGTAATGTGATC+CGG | - | chr1_2:11799602-11799621 | Msa0056270:intron | 40.0% | |
| GACACGATAAAGAGAGAATG+AGG | + | chr1_2:11799656-11799675 | None:intergenic | 40.0% | |
| TGCTCGCTGTTTACATTTCA+AGG | - | chr1_2:11799677-11799696 | Msa0056270:intron | 40.0% | |
| GCTCGCTGTTTACATTTCAA+GGG | - | chr1_2:11799678-11799697 | Msa0056270:intron | 40.0% | |
| CTCGCTGTTTACATTTCAAG+GGG | - | chr1_2:11799679-11799698 | Msa0056270:intron | 40.0% | |
| TTGAACACAAACGGTACCTT+TGG | + | chr1_2:11799773-11799792 | None:intergenic | 40.0% | |
| !! | AAGGTACCGTTTGTGTTCAA+TGG | - | chr1_2:11799773-11799792 | Msa0056270:intron | 40.0% |
| GACATGGTATATTCCCATTG+AGG | - | chr1_2:11799799-11799818 | Msa0056270:intron | 40.0% | |
| ! | TCCCATTGAGGTATTTGGAT+TGG | - | chr1_2:11799811-11799830 | Msa0056270:intron | 40.0% |
| GATTGTGGTATCAACAGCAT+CGG | - | chr1_2:11799854-11799873 | Msa0056270:intron | 40.0% | |
| ATTGTGGTATCAACAGCATC+GGG | - | chr1_2:11799855-11799874 | Msa0056270:intron | 40.0% | |
| !!! | GTTTTTGGTTGATGCAACTG+TGG | - | chr1_2:11799981-11800000 | Msa0056270:CDS | 40.0% |
| ! | GTGATAATGATGGCATCAAG+TGG | - | chr1_2:11800062-11800081 | Msa0056270:five_prime_UTR | 40.0% |
| GGTGAAGATTGAACGAACGA+AGG | + | chr1_2:11796698-11796717 | None:intergenic | 45.0% | |
| TCGCTACAATCTCAAACGCA+AGG | - | chr1_2:11796919-11796938 | Msa0056270:three_prime_UTR | 45.0% | |
| TTTACCCTCCCCATCAACAA+AGG | + | chr1_2:11797129-11797148 | None:intergenic | 45.0% | |
| GCCAATCTAAAAGGGCTCAT+AGG | - | chr1_2:11797479-11797498 | Msa0056270:intron | 45.0% | |
| ! | CCCTATGAGCCCTTTTAGAT+TGG | + | chr1_2:11797483-11797502 | None:intergenic | 45.0% |
| ATCCAAAAAGGGCCATAGTG+TGG | - | chr1_2:11797713-11797732 | Msa0056270:intron | 45.0% | |
| AAAAAGGGCCATAGTGTGGT+GGG | - | chr1_2:11797717-11797736 | Msa0056270:intron | 45.0% | |
| AACAATGCTTCTGTCACTCC+AGG | + | chr1_2:11798223-11798242 | None:intergenic | 45.0% | |
| GTCCAGAACTCATATGATGC+GGG | - | chr1_2:11798366-11798385 | Msa0056270:CDS | 45.0% | |
| AAGGAGATAGCCAGTCAGAT+GGG | - | chr1_2:11798395-11798414 | Msa0056270:CDS | 45.0% | |
| TTATAGCCTTCCCATCTGAC+TGG | + | chr1_2:11798408-11798427 | None:intergenic | 45.0% | |
| !! | TCAACCACTCTTTTAGGAGG+AGG | + | chr1_2:11798463-11798482 | None:intergenic | 45.0% |
| !! | TGAGGATGATGATGATGGTG+TGG | - | chr1_2:11798615-11798634 | Msa0056270:CDS | 45.0% |
| TGTGTCTGTACTGCAACGAT+CGG | - | chr1_2:11798882-11798901 | Msa0056270:intron | 45.0% | |
| GGTAGCGAAAAATCACTGCA+AGG | - | chr1_2:11798946-11798965 | Msa0056270:intron | 45.0% | |
| GAGCATATGCGTAGCAAGAT+GGG | - | chr1_2:11799580-11799599 | Msa0056270:intron | 45.0% | |
| AGCATATGCGTAGCAAGATG+GGG | - | chr1_2:11799581-11799600 | Msa0056270:intron | 45.0% | |
| TGACATTGTTTGGCAGGTTC+CGG | + | chr1_2:11799624-11799643 | None:intergenic | 45.0% | |
| !! | AAATAAATTATCAAAAAATT+CGG | + | chr1_2:11796968-11796987 | None:intergenic | 5.0% |
| CTCATAGGGCCTGTTTGGAT+TGG | - | chr1_2:11797494-11797513 | Msa0056270:intron | 50.0% | |
| ! | CACCACACTATGGCCCTTTT+TGG | + | chr1_2:11797718-11797737 | None:intergenic | 50.0% |
| CAAAAAGGGCCATAGTGTGG+TGG | - | chr1_2:11797716-11797735 | Msa0056270:intron | 50.0% | |
| GAGGTTACCAGGTTCTATGC+CGG | - | chr1_2:11797739-11797758 | Msa0056270:intron | 50.0% | |
| TACCAGGTTCTATGCCGGTA+TGG | - | chr1_2:11797744-11797763 | Msa0056270:intron | 50.0% | |
| AGGTTCTATGCCGGTATGGT+GGG | - | chr1_2:11797748-11797767 | Msa0056270:intron | 50.0% | |
| !! | TGGGAGGTGTTGCTAGTAGA+GGG | - | chr1_2:11797767-11797786 | Msa0056270:intron | 50.0% |
| TTGTAGGATTAGGGCCCGTT+TGG | - | chr1_2:11797797-11797816 | Msa0056270:intron | 50.0% | |
| AAGCTGCACTTGCTCAAGAG+AGG | - | chr1_2:11798254-11798273 | Msa0056270:CDS | 50.0% | |
| AGCTGCACTTGCTCAAGAGA+GGG | - | chr1_2:11798255-11798274 | Msa0056270:CDS | 50.0% | |
| AGCCCTATGCTCTATAGCTG+TGG | - | chr1_2:11798292-11798311 | Msa0056270:CDS | 50.0% | |
| GGCCACAGCTATAGAGCATA+GGG | + | chr1_2:11798297-11798316 | None:intergenic | 50.0% | |
| AGGCCACAGCTATAGAGCAT+AGG | + | chr1_2:11798298-11798317 | None:intergenic | 50.0% | |
| CTCTATAGCTGTGGCCTATG+TGG | - | chr1_2:11798301-11798320 | Msa0056270:CDS | 50.0% | |
| ! | TGACTGGCTATCTCCTTCAG+AGG | + | chr1_2:11798392-11798411 | None:intergenic | 50.0% |
| GAAGGAGATAGCCAGTCAGA+TGG | - | chr1_2:11798394-11798413 | Msa0056270:CDS | 50.0% | |
| AGATAGCCAGTCAGATGGGA+AGG | - | chr1_2:11798399-11798418 | Msa0056270:CDS | 50.0% | |
| TTCACAACGCGTTGTGGAAG+TGG | + | chr1_2:11798436-11798455 | None:intergenic | 50.0% | |
| CAAGCCTCCTCCTAAAAGAG+TGG | - | chr1_2:11798456-11798475 | Msa0056270:CDS | 50.0% | |
| TGACAGCGAAGATGAATGGG+TGG | - | chr1_2:11798501-11798520 | Msa0056270:CDS | 50.0% | |
| CCTTCAGCCCAAGATAAGTG+AGG | + | chr1_2:11798771-11798790 | None:intergenic | 50.0% | |
| CCTCACTTATCTTGGGCTGA+AGG | - | chr1_2:11798768-11798787 | Msa0056270:intron | 50.0% | |
| GTGTCATCCTTTCAGCAGCT+TGG | - | chr1_2:11798904-11798923 | Msa0056270:intron | 50.0% | |
| ACTGCTTCCAAGCTGCTGAA+AGG | + | chr1_2:11798914-11798933 | None:intergenic | 50.0% | |
| GGAAGCAGTCAGGAAACACA+TGG | - | chr1_2:11798925-11798944 | Msa0056270:intron | 50.0% | |
| ! | TGGTGATGATGACGATGAGG+AGG | - | chr1_2:11798976-11798995 | Msa0056270:intron | 50.0% |
| CGATGAGGAGGAAGTTGAGT+TGG | - | chr1_2:11798988-11799007 | Msa0056270:intron | 50.0% | |
| GGGAAGCAGCTAGTTGTATC+TGG | - | chr1_2:11799173-11799192 | Msa0056270:intron | 50.0% | |
| ! | TTATTTGCTGCTGATGGGCG+TGG | + | chr1_2:11799323-11799342 | None:intergenic | 50.0% |
| CATTGCCGTTACTGCGGAAT+TGG | - | chr1_2:11799343-11799362 | Msa0056270:intron | 50.0% | |
| TGCAGCCAATTCCGCAGTAA+CGG | + | chr1_2:11799351-11799370 | None:intergenic | 50.0% | |
| TTACTGCGGAATTGGCTGCA+AGG | - | chr1_2:11799351-11799370 | Msa0056270:intron | 50.0% | |
| TTGCTGCCTTGATTGGACAG+TGG | + | chr1_2:11799515-11799534 | None:intergenic | 50.0% | |
| GCAGATGAACAGATCAGGTG+TGG | - | chr1_2:11799558-11799577 | Msa0056270:intron | 50.0% | |
| GGAGCATATGCGTAGCAAGA+TGG | - | chr1_2:11799579-11799598 | Msa0056270:intron | 50.0% | |
| ! | TGGTATCAACAGCATCGGGA+TGG | - | chr1_2:11799859-11799878 | Msa0056270:intron | 50.0% |
| AAGGGCTCATAGGGCCTGTT+TGG | - | chr1_2:11797489-11797508 | Msa0056270:intron | 55.0% | |
| GGTAACCTCCCACCACACTA+TGG | + | chr1_2:11797728-11797747 | None:intergenic | 55.0% | |
| ! | TAGTGTGGTGGGAGGTTACC+AGG | - | chr1_2:11797728-11797747 | Msa0056270:intron | 55.0% |
| CACCATACCGGCATAGAACC+TGG | + | chr1_2:11797749-11797768 | None:intergenic | 55.0% | |
| CAGGTTCTATGCCGGTATGG+TGG | - | chr1_2:11797747-11797766 | Msa0056270:intron | 55.0% | |
| ! | TTCTATGCCGGTATGGTGGG+AGG | - | chr1_2:11797751-11797770 | Msa0056270:intron | 55.0% |
| AGCAACACCTCCCACCATAC+CGG | + | chr1_2:11797761-11797780 | None:intergenic | 55.0% | |
| !! | GTGGGAGGTGTTGCTAGTAG+AGG | - | chr1_2:11797766-11797785 | Msa0056270:intron | 55.0% |
| GGATTAGGGCCCGTTTGGAT+TGG | - | chr1_2:11797802-11797821 | Msa0056270:intron | 55.0% | |
| AAATAGGTGGCTGGGGTTCC+TGG | - | chr1_2:11798202-11798221 | Msa0056270:CDS | 55.0% | |
| TAGCTGTGGCCTATGTGGCA+AGG | - | chr1_2:11798306-11798325 | Msa0056270:CDS | 55.0% | |
| AGCTGTGGCCTATGTGGCAA+GGG | - | chr1_2:11798307-11798326 | Msa0056270:CDS | 55.0% | |
| GGCCCGCATCATATGAGTTC+TGG | + | chr1_2:11798371-11798390 | None:intergenic | 55.0% | |
| CATATGATGCGGGCCTCTGA+AGG | - | chr1_2:11798376-11798395 | Msa0056270:CDS | 55.0% | |
| ! | GGCTTGTTCACAACGCGTTG+TGG | + | chr1_2:11798442-11798461 | None:intergenic | 55.0% |
| CAGCGAAGATGAATGGGTGG+AGG | - | chr1_2:11798504-11798523 | Msa0056270:CDS | 55.0% | |
| TCAGCAGCTTGGAAGCAGTC+AGG | - | chr1_2:11798915-11798934 | Msa0056270:intron | 55.0% | |
| GTCTGGCCACTGTCCAATCA+AGG | - | chr1_2:11799506-11799525 | Msa0056270:intron | 55.0% | |
| ! | AAGGGCCATAGTGTGGTGGG+AGG | - | chr1_2:11797720-11797739 | Msa0056270:intron | 60.0% |
| ! | CAGGTACAGGAGCATGGGTC+TGG | - | chr1_2:11799489-11799508 | Msa0056270:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 11796689 | 11800182 | 11796689 | ID=Msa0056270;Name=Msa0056270 |
| chr1_2 | mRNA | 11796689 | 11800182 | 11796689 | ID=Msa0056270-mRNA-1;Parent=Msa0056270;Name=Msa0056270-mRNA-1;_AED=0.04;_eAED=0.04;_QI=147|1|1|1|1|1|5|531|410 |
| chr1_2 | exon | 11796689 | 11797379 | 11796689 | ID=Msa0056270-mRNA-1:exon:4541;Parent=Msa0056270-mRNA-1 |
| chr1_2 | exon | 11797499 | 11797714 | 11797499 | ID=Msa0056270-mRNA-1:exon:4540;Parent=Msa0056270-mRNA-1 |
| chr1_2 | exon | 11797836 | 11798005 | 11797836 | ID=Msa0056270-mRNA-1:exon:4539;Parent=Msa0056270-mRNA-1 |
| chr1_2 | exon | 11798082 | 11798663 | 11798082 | ID=Msa0056270-mRNA-1:exon:4538;Parent=Msa0056270-mRNA-1 |
| chr1_2 | exon | 11799931 | 11800182 | 11799931 | ID=Msa0056270-mRNA-1:exon:4537;Parent=Msa0056270-mRNA-1 |
| chr1_2 | five_prime_UTR | 11800036 | 11800182 | 11800036 | ID=Msa0056270-mRNA-1:five_prime_utr;Parent=Msa0056270-mRNA-1 |
| chr1_2 | CDS | 11799931 | 11800035 | 11799931 | ID=Msa0056270-mRNA-1:cds;Parent=Msa0056270-mRNA-1 |
| chr1_2 | CDS | 11798082 | 11798663 | 11798082 | ID=Msa0056270-mRNA-1:cds;Parent=Msa0056270-mRNA-1 |
| chr1_2 | CDS | 11797836 | 11798005 | 11797836 | ID=Msa0056270-mRNA-1:cds;Parent=Msa0056270-mRNA-1 |
| chr1_2 | CDS | 11797499 | 11797714 | 11797499 | ID=Msa0056270-mRNA-1:cds;Parent=Msa0056270-mRNA-1 |
| chr1_2 | CDS | 11797220 | 11797379 | 11797220 | ID=Msa0056270-mRNA-1:cds;Parent=Msa0056270-mRNA-1 |
| chr1_2 | three_prime_UTR | 11796689 | 11797219 | 11796689 | ID=Msa0056270-mRNA-1:three_prime_utr;Parent=Msa0056270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
