Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0658880 | XP_003630050.1 | 96.028 | 705 | 17 | 6 | 1 | 700 | 1 | 699 | 0.0 | 1376 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0658880 | sp|A0A178VBJ0|APSR1_ARATH | 30.220 | 364 | 220 | 8 | 265 | 627 | 195 | 525 | 2.90e-41 | 163 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0658880 | G7LAC7 | 96.028 | 705 | 17 | 6 | 1 | 700 | 1 | 699 | 0.0 | 1376 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0658880 | 0.817480 | 3.225802e-52 | -8.615850e-47 |
| Msa0001940 | Msa0658880 | 0.803007 | 4.281882e-49 | -8.615850e-47 |
| Msa0002580 | Msa0658880 | 0.806232 | 9.089587e-50 | -8.615850e-47 |
| Msa0005890 | Msa0658880 | 0.831654 | 1.476419e-55 | -8.615850e-47 |
| Msa0017670 | Msa0658880 | 0.809958 | 1.462632e-50 | -8.615850e-47 |
| Msa0017950 | Msa0658880 | 0.804766 | 1.845032e-49 | -8.615850e-47 |
| Msa0018160 | Msa0658880 | 0.831660 | 1.471555e-55 | -8.615850e-47 |
| Msa0028420 | Msa0658880 | 0.828074 | 1.100266e-54 | -8.615850e-47 |
| Msa0036870 | Msa0658880 | 0.820402 | 6.991659e-53 | -8.615850e-47 |
| Msa0042610 | Msa0658880 | 0.818904 | 1.536404e-52 | -8.615850e-47 |
| Msa0052260 | Msa0658880 | 0.815998 | 6.934050e-52 | -8.615850e-47 |
| Msa0052480 | Msa0658880 | 0.809368 | 1.958319e-50 | -8.615850e-47 |
| Msa0054690 | Msa0658880 | 0.818206 | 2.212189e-52 | -8.615850e-47 |
| Msa0075220 | Msa0658880 | 0.810534 | 1.099122e-50 | -8.615850e-47 |
| Msa0081980 | Msa0658880 | 0.805430 | 1.339821e-49 | -8.615850e-47 |
| Msa0090400 | Msa0658880 | 0.846826 | 1.701443e-59 | -8.615850e-47 |
| Msa0092790 | Msa0658880 | 0.807657 | 4.540737e-50 | -8.615850e-47 |
| Msa0094780 | Msa0658880 | 0.806254 | 8.993617e-50 | -8.615850e-47 |
| Msa0097260 | Msa0658880 | 0.819688 | 1.018278e-52 | -8.615850e-47 |
| Msa0097890 | Msa0658880 | 0.801658 | 8.115882e-49 | -8.615850e-47 |
| Msa0098040 | Msa0658880 | 0.816201 | 6.248007e-52 | -8.615850e-47 |
| Msa0117480 | Msa0658880 | 0.823732 | 1.182068e-53 | -8.615850e-47 |
| Msa0624900 | Msa0658880 | 0.813175 | 2.923632e-51 | -8.615850e-47 |
| Msa0626450 | Msa0658880 | 0.807419 | 5.101658e-50 | -8.615850e-47 |
| Msa0626490 | Msa0658880 | 0.801751 | 7.768707e-49 | -8.615850e-47 |
| Msa0658640 | Msa0658880 | 0.806179 | 9.328010e-50 | -8.615850e-47 |
| Msa0658880 | Msa0661150 | 0.807985 | 3.868071e-50 | -8.615850e-47 |
| Msa0658880 | Msa0664600 | 0.803526 | 3.342427e-49 | -8.615850e-47 |
| Msa0658880 | Msa0666700 | 0.800984 | 1.114890e-48 | -8.615850e-47 |
| Msa0658880 | Msa0670100 | 0.838212 | 3.289232e-57 | -8.615850e-47 |
| Msa0658880 | Msa0679870 | 0.809021 | 2.324247e-50 | -8.615850e-47 |
| Msa0658880 | Msa0698830 | 0.806841 | 6.760838e-50 | -8.615850e-47 |
| Msa0658880 | Msa0700460 | 0.800961 | 1.127009e-48 | -8.615850e-47 |
| Msa0658880 | Msa0704380 | 0.871646 | 5.831482e-67 | -8.615850e-47 |
| Msa0658880 | Msa0704410 | 0.947155 | 1.164441e-105 | -8.615850e-47 |
| Msa0658880 | Msa0735780 | 0.816764 | 4.674775e-52 | -8.615850e-47 |
| Msa0658880 | Msa0741220 | 0.810856 | 9.362659e-51 | -8.615850e-47 |
| Msa0658880 | Msa0792370 | 0.802690 | 4.978231e-49 | -8.615850e-47 |
| Msa0658880 | Msa0795870 | 0.837258 | 5.779444e-57 | -8.615850e-47 |
| Msa0658880 | Msa0805330 | 0.802191 | 6.307102e-49 | -8.615850e-47 |
| Msa0658880 | Msa0828970 | 0.805298 | 1.428034e-49 | -8.615850e-47 |
| Msa0658880 | Msa0829300 | 0.814698 | 1.349495e-51 | -8.615850e-47 |
| Msa0658880 | Msa0829330 | 0.823367 | 1.439421e-53 | -8.615850e-47 |
| Msa0658880 | Msa0833650 | 0.838865 | 2.230358e-57 | -8.615850e-47 |
| Msa0658880 | Msa0835490 | 0.800467 | 1.421740e-48 | -8.615850e-47 |
| Msa0658880 | Msa0873730 | 0.802488 | 5.478326e-49 | -8.615850e-47 |
| Msa0658880 | Msa0938820 | 0.803126 | 4.045297e-49 | -8.615850e-47 |
| Msa0658880 | Msa0945110 | 0.832555 | 8.843925e-56 | -8.615850e-47 |
| Msa0658880 | Msa0967380 | 0.800176 | 1.629383e-48 | -8.615850e-47 |
| Msa0658880 | Msa0967870 | 0.809859 | 1.536625e-50 | -8.615850e-47 |
| Msa0658880 | Msa1019430 | 0.808296 | 3.321364e-50 | -8.615850e-47 |
| Msa0658880 | Msa1019470 | 0.812183 | 4.820177e-51 | -8.615850e-47 |
| Msa0658880 | Msa1042160 | 0.820117 | 8.123772e-53 | -8.615850e-47 |
| Msa0658880 | Msa1042190 | 0.820482 | 6.701691e-53 | -8.615850e-47 |
| Msa0658880 | Msa1044680 | 0.805793 | 1.124464e-49 | -8.615850e-47 |
| Msa0658880 | Msa1074370 | 0.816813 | 4.558250e-52 | -8.615850e-47 |
| Msa0658880 | Msa1096960 | 0.811149 | 8.087413e-51 | -8.615850e-47 |
| Msa0658880 | Msa1103990 | 0.834778 | 2.462340e-56 | -8.615850e-47 |
| Msa0658880 | Msa1132840 | 0.838998 | 2.060944e-57 | -8.615850e-47 |
| Msa0658880 | Msa1155170 | -0.807254 | 5.530081e-50 | -8.615850e-47 |
| Msa0658880 | Msa1167470 | 0.803626 | 3.186321e-49 | -8.615850e-47 |
| Msa0658880 | Msa1177320 | 0.810356 | 1.200620e-50 | -8.615850e-47 |
| Msa0658880 | Msa1190920 | 0.811591 | 6.486148e-51 | -8.615850e-47 |
| Msa0658880 | Msa1200890 | 0.813591 | 2.368647e-51 | -8.615850e-47 |
| Msa0658880 | Msa1208950 | 0.804648 | 1.953278e-49 | -8.615850e-47 |
| Msa0658880 | Msa1216110 | 0.804953 | 1.686778e-49 | -8.615850e-47 |
| Msa0658880 | Msa1224930 | 0.802069 | 6.681756e-49 | -8.615850e-47 |
| Msa0658880 | Msa1226520 | 0.808274 | 3.356913e-50 | -8.615850e-47 |
| Msa0658880 | Msa1228200 | 0.801796 | 7.602579e-49 | -8.615850e-47 |
| Msa0658880 | Msa1240770 | 0.809275 | 2.050488e-50 | -8.615850e-47 |
| Msa0658880 | Msa1265650 | 0.805088 | 1.580022e-49 | -8.615850e-47 |
| Msa0658880 | Msa1297230 | 0.817943 | 2.536607e-52 | -8.615850e-47 |
| Msa0658880 | Msa1298220 | 0.810312 | 1.227181e-50 | -8.615850e-47 |
| Msa0658880 | Msa1303560 | 0.815484 | 9.028788e-52 | -8.615850e-47 |
| Msa0658880 | Msa1303650 | 0.818530 | 1.868117e-52 | -8.615850e-47 |
| Msa0658880 | Msa1306910 | 0.813621 | 2.333295e-51 | -8.615850e-47 |
| Msa0658880 | Msa1307630 | 0.808551 | 2.930395e-50 | -8.615850e-47 |
| Msa0658880 | Msa1320670 | 0.803890 | 2.808278e-49 | -8.615850e-47 |
| Msa0658880 | Msa1321340 | 0.835221 | 1.904187e-56 | -8.615850e-47 |
| Msa0658880 | Msa1343430 | 0.802173 | 6.361382e-49 | -8.615850e-47 |
| Msa0658880 | Msa1359690 | 0.803099 | 4.096824e-49 | -8.615850e-47 |
| Msa0658880 | Msa1372040 | 0.807124 | 5.891431e-50 | -8.615850e-47 |
| Msa0658880 | Msa1373100 | 0.808029 | 3.785987e-50 | -8.615850e-47 |
| Msa0658880 | Msa1391770 | 0.801409 | 9.128972e-49 | -8.615850e-47 |
| Msa0658880 | Msa1393280 | 0.814968 | 1.175677e-51 | -8.615850e-47 |
| Msa0658880 | Msa1422950 | 0.807883 | 4.065374e-50 | -8.615850e-47 |
| Msa0658880 | Msa1440880 | 0.807838 | 4.156142e-50 | -8.615850e-47 |
| Msa0658880 | Msa1440960 | 0.800692 | 1.278935e-48 | -8.615850e-47 |
| Msa0658880 | Msa1446810 | 0.812440 | 4.235222e-51 | -8.615850e-47 |
| Msa0658880 | Msa1454140 | 0.811043 | 8.526477e-51 | -8.615850e-47 |
| Msa0658880 | Msa1465440 | 0.801146 | 1.033012e-48 | -8.615850e-47 |
| Msa0658880 | Msa1466920 | 0.817550 | 3.110882e-52 | -8.615850e-47 |
| Msa0124060 | Msa0658880 | 0.805221 | 1.482036e-49 | -8.615850e-47 |
| Msa0124280 | Msa0658880 | 0.809007 | 2.341270e-50 | -8.615850e-47 |
| Msa0137880 | Msa0658880 | 0.852195 | 5.414864e-61 | -8.615850e-47 |
| Msa0140280 | Msa0658880 | 0.823276 | 1.511492e-53 | -8.615850e-47 |
| Msa0146040 | Msa0658880 | 0.802041 | 6.772515e-49 | -8.615850e-47 |
| Msa0167520 | Msa0658880 | 0.813871 | 2.055569e-51 | -8.615850e-47 |
| Msa0168500 | Msa0658880 | 0.807365 | 5.237890e-50 | -8.615850e-47 |
| Msa0174450 | Msa0658880 | 0.800583 | 1.346554e-48 | -8.615850e-47 |
| Msa0182240 | Msa0658880 | 0.807793 | 4.250102e-50 | -8.615850e-47 |
| Msa0221000 | Msa0658880 | 0.805297 | 1.429031e-49 | -8.615850e-47 |
| Msa0225100 | Msa0658880 | 0.821307 | 4.329665e-53 | -8.615850e-47 |
| Msa0225860 | Msa0658880 | 0.827786 | 1.290502e-54 | -8.615850e-47 |
| Msa0229230 | Msa0658880 | 0.809940 | 1.475972e-50 | -8.615850e-47 |
| Msa0378720 | Msa0658880 | 0.813999 | 1.926032e-51 | -8.615850e-47 |
| Msa0380620 | Msa0658880 | 0.800326 | 1.519270e-48 | -8.615850e-47 |
| Msa0380670 | Msa0658880 | 0.824005 | 1.020452e-53 | -8.615850e-47 |
| Msa0389950 | Msa0658880 | 0.804451 | 2.146264e-49 | -8.615850e-47 |
| Msa0419700 | Msa0658880 | 0.812202 | 4.772936e-51 | -8.615850e-47 |
| Msa0430260 | Msa0658880 | 0.802560 | 5.294163e-49 | -8.615850e-47 |
| Msa0430300 | Msa0658880 | 0.836895 | 7.157372e-57 | -8.615850e-47 |
| Msa0436910 | Msa0658880 | 0.810851 | 9.384649e-51 | -8.615850e-47 |
| Msa0472950 | Msa0658880 | 0.805201 | 1.496705e-49 | -8.615850e-47 |
| Msa0474730 | Msa0658880 | 0.819909 | 9.064825e-53 | -8.615850e-47 |
| Msa0476650 | Msa0658880 | 0.806993 | 6.280103e-50 | -8.615850e-47 |
| Msa0244640 | Msa0658880 | 0.819922 | 9.004914e-53 | -8.615850e-47 |
| Msa0266180 | Msa0658880 | 0.814824 | 1.265557e-51 | -8.615850e-47 |
| Msa0267110 | Msa0658880 | 0.854487 | 1.191191e-61 | -8.615850e-47 |
| Msa0283800 | Msa0658880 | 0.803031 | 4.233267e-49 | -8.615850e-47 |
| Msa0287740 | Msa0658880 | 0.825821 | 3.803136e-54 | -8.615850e-47 |
| Msa0298470 | Msa0658880 | 0.833515 | 5.102823e-56 | -8.615850e-47 |
| Msa0321620 | Msa0658880 | 0.816867 | 4.431418e-52 | -8.615850e-47 |
| Msa0321920 | Msa0658880 | 0.800168 | 1.635732e-48 | -8.615850e-47 |
| Msa0330380 | Msa0658880 | 0.805089 | 1.579458e-49 | -8.615850e-47 |
| Msa0337700 | Msa0658880 | 0.832110 | 1.139570e-55 | -8.615850e-47 |
| Msa0339500 | Msa0658880 | 0.807838 | 4.157161e-50 | -8.615850e-47 |
| Msa0340500 | Msa0658880 | 0.840594 | 7.917223e-58 | -8.615850e-47 |
| Msa0483100 | Msa0658880 | 0.806925 | 6.491880e-50 | -8.615850e-47 |
| Msa0520990 | Msa0658880 | 0.800609 | 1.330320e-48 | -8.615850e-47 |
| Msa0530780 | Msa0658880 | 0.836827 | 7.446018e-57 | -8.615850e-47 |
| Msa0534720 | Msa0658880 | 0.800414 | 1.457671e-48 | -8.615850e-47 |
| Msa0546500 | Msa0658880 | 0.805684 | 1.185314e-49 | -8.615850e-47 |
| Msa0548470 | Msa0658880 | 0.802917 | 4.468648e-49 | -8.615850e-47 |
| Msa0580370 | Msa0658880 | 0.839888 | 1.209864e-57 | -8.615850e-47 |
| Msa0597790 | Msa0658880 | 0.826558 | 2.539311e-54 | -8.615850e-47 |
| Msa0600930 | Msa0658880 | 0.802452 | 5.573619e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0658880 | MtrunA17_Chr8g0382551 | 94.820 | 444 | 13 | 5 | 1 | 440 | 1 | 438 | 0.0 | 842 |
| Msa0658880 | MtrunA17_Chr8g0382541 | 97.890 | 237 | 4 | 1 | 465 | 700 | 1 | 237 | 1.81e-170 | 487 |
| Msa0658880 | MtrunA17_Chr5g0440551 | 35.484 | 775 | 376 | 22 | 1 | 690 | 1 | 736 | 9.24e-120 | 376 |
| Msa0658880 | MtrunA17_Chr3g0118401 | 40.173 | 463 | 245 | 10 | 250 | 690 | 308 | 760 | 2.58e-95 | 312 |
| Msa0658880 | MtrunA17_Chr3g0118401 | 45.570 | 79 | 42 | 1 | 1 | 78 | 1 | 79 | 2.50e-14 | 77.0 |
| Msa0658880 | MtrunA17_Chr4g0072011 | 34.554 | 437 | 236 | 11 | 264 | 686 | 329 | 729 | 6.88e-60 | 214 |
| Msa0658880 | MtrunA17_Chr4g0072011 | 36.290 | 124 | 73 | 2 | 1 | 124 | 1 | 118 | 2.79e-11 | 67.0 |
| Msa0658880 | MtrunA17_Chr2g0298171 | 39.088 | 307 | 150 | 7 | 264 | 557 | 526 | 808 | 1.98e-49 | 186 |
| Msa0658880 | MtrunA17_Chr3g0124841 | 31.856 | 361 | 221 | 4 | 267 | 624 | 451 | 789 | 4.58e-48 | 182 |
| Msa0658880 | MtrunA17_Chr3g0124841 | 45.161 | 62 | 34 | 0 | 1 | 62 | 1 | 62 | 2.33e-11 | 67.4 |
| Msa0658880 | MtrunA17_Chr3g0143731 | 24.211 | 760 | 419 | 23 | 1 | 681 | 1 | 682 | 5.48e-48 | 180 |
| Msa0658880 | MtrunA17_Chr5g0448571 | 29.909 | 438 | 234 | 8 | 273 | 675 | 357 | 756 | 6.90e-48 | 181 |
| Msa0658880 | MtrunA17_Chr1g0208081 | 90.588 | 85 | 8 | 0 | 381 | 465 | 1 | 85 | 1.52e-45 | 157 |
| Msa0658880 | MtrunA17_Chr5g0405741 | 29.891 | 368 | 223 | 7 | 265 | 630 | 199 | 533 | 1.47e-41 | 160 |
| Msa0658880 | MtrunA17_Chr2g0331821 | 29.444 | 360 | 210 | 8 | 271 | 625 | 321 | 641 | 6.47e-39 | 154 |
| Msa0658880 | MtrunA17_Chr1g0208071 | 91.667 | 72 | 4 | 1 | 270 | 341 | 8 | 77 | 2.02e-37 | 134 |
| Msa0658880 | MtrunA17_Chr3g0130761 | 29.070 | 430 | 253 | 12 | 196 | 624 | 287 | 665 | 1.01e-35 | 144 |
| Msa0658880 | MtrunA17_Chr3g0139411 | 29.167 | 360 | 206 | 10 | 272 | 625 | 280 | 596 | 1.04e-34 | 140 |
| Msa0658880 | MtrunA17_Chr8g0335341 | 25.953 | 682 | 378 | 27 | 1 | 630 | 1 | 607 | 3.47e-31 | 130 |
| Msa0658880 | MtrunA17_Chr4g0004471 | 25.348 | 359 | 220 | 9 | 271 | 625 | 124 | 438 | 5.68e-29 | 122 |
| Msa0658880 | MtrunA17_Chr2g0303521 | 32.389 | 247 | 149 | 7 | 384 | 624 | 293 | 527 | 9.58e-26 | 112 |
| Msa0658880 | MtrunA17_Chr7g0250681 | 29.577 | 284 | 174 | 8 | 355 | 631 | 465 | 729 | 1.38e-25 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0658880 | AT4G39790.1 | 53.203 | 718 | 239 | 21 | 1 | 691 | 9 | 656 | 0.0 | 636 |
| Msa0658880 | AT2G27090.2 | 41.995 | 431 | 233 | 6 | 270 | 689 | 307 | 731 | 4.61e-100 | 324 |
| Msa0658880 | AT2G27090.2 | 55.263 | 76 | 33 | 1 | 1 | 75 | 1 | 76 | 5.41e-17 | 85.9 |
| Msa0658880 | AT2G27090.1 | 41.995 | 431 | 233 | 6 | 270 | 689 | 307 | 731 | 4.61e-100 | 324 |
| Msa0658880 | AT2G27090.1 | 55.263 | 76 | 33 | 1 | 1 | 75 | 1 | 76 | 5.41e-17 | 85.9 |
| Msa0658880 | AT1G21740.1 | 37.057 | 367 | 194 | 9 | 262 | 620 | 489 | 826 | 2.41e-59 | 216 |
| Msa0658880 | AT4G30130.3 | 28.633 | 695 | 367 | 19 | 1 | 620 | 1 | 641 | 7.27e-59 | 212 |
| Msa0658880 | AT4G30130.1 | 28.633 | 695 | 367 | 19 | 1 | 620 | 1 | 641 | 7.27e-59 | 212 |
| Msa0658880 | AT1G77500.1 | 36.011 | 361 | 196 | 7 | 267 | 620 | 446 | 778 | 1.33e-58 | 213 |
| Msa0658880 | AT4G35240.4 | 30.474 | 443 | 234 | 10 | 277 | 682 | 426 | 831 | 1.16e-52 | 196 |
| Msa0658880 | AT4G35240.3 | 30.474 | 443 | 234 | 10 | 277 | 682 | 426 | 831 | 1.16e-52 | 196 |
| Msa0658880 | AT4G35240.2 | 30.474 | 443 | 234 | 10 | 277 | 682 | 426 | 831 | 1.77e-52 | 195 |
| Msa0658880 | AT4G35240.1 | 30.474 | 443 | 234 | 10 | 277 | 682 | 426 | 831 | 1.77e-52 | 195 |
| Msa0658880 | AT2G17110.1 | 31.674 | 442 | 230 | 9 | 277 | 683 | 316 | 720 | 2.05e-51 | 191 |
| Msa0658880 | AT2G19090.1 | 31.532 | 444 | 236 | 10 | 202 | 617 | 318 | 721 | 1.36e-43 | 169 |
| Msa0658880 | AT3G51290.3 | 30.220 | 364 | 220 | 8 | 265 | 627 | 195 | 525 | 2.95e-42 | 163 |
| Msa0658880 | AT1G52320.3 | 31.111 | 360 | 202 | 10 | 266 | 621 | 23 | 340 | 5.19e-42 | 159 |
| Msa0658880 | AT1G52320.4 | 31.111 | 360 | 202 | 10 | 266 | 621 | 23 | 340 | 5.19e-42 | 159 |
| Msa0658880 | AT3G51290.2 | 30.220 | 364 | 220 | 8 | 265 | 627 | 195 | 525 | 5.98e-42 | 164 |
| Msa0658880 | AT1G52320.2 | 31.111 | 360 | 202 | 10 | 266 | 621 | 349 | 666 | 3.24e-41 | 161 |
| Msa0658880 | AT1G52320.5 | 31.111 | 360 | 202 | 10 | 266 | 621 | 349 | 666 | 3.24e-41 | 161 |
| Msa0658880 | AT1G52320.1 | 31.111 | 360 | 202 | 10 | 266 | 621 | 326 | 643 | 3.51e-41 | 161 |
| Msa0658880 | AT3G51290.1 | 29.945 | 364 | 215 | 9 | 265 | 627 | 195 | 519 | 2.37e-37 | 148 |
| Msa0658880 | AT1G20530.1 | 27.735 | 393 | 232 | 9 | 249 | 638 | 212 | 555 | 1.57e-34 | 140 |
| Msa0658880 | AT5G25590.1 | 27.933 | 358 | 218 | 7 | 271 | 625 | 330 | 650 | 1.02e-30 | 129 |
| Msa0658880 | AT4G30130.4 | 39.706 | 204 | 103 | 2 | 264 | 467 | 297 | 480 | 1.84e-30 | 127 |
| Msa0658880 | AT4G30130.4 | 28.333 | 180 | 94 | 5 | 1 | 158 | 1 | 167 | 2.35e-12 | 70.5 |
| Msa0658880 | AT4G30130.2 | 39.706 | 204 | 103 | 2 | 264 | 467 | 297 | 480 | 1.84e-30 | 127 |
| Msa0658880 | AT4G30130.2 | 28.333 | 180 | 94 | 5 | 1 | 158 | 1 | 167 | 2.35e-12 | 70.5 |
| Msa0658880 | AT1G02110.1 | 27.717 | 368 | 213 | 10 | 270 | 630 | 273 | 594 | 3.12e-28 | 121 |
| Msa0658880 | AT2G34670.2 | 30.962 | 239 | 155 | 3 | 384 | 620 | 333 | 563 | 1.50e-27 | 119 |
| Msa0658880 | AT3G60320.1 | 27.446 | 368 | 225 | 8 | 268 | 631 | 353 | 682 | 1.62e-26 | 116 |
| Msa0658880 | AT5G54480.1 | 30.660 | 212 | 133 | 4 | 382 | 592 | 394 | 592 | 1.37e-24 | 109 |
| Msa0658880 | AT2G34670.1 | 30.734 | 218 | 141 | 3 | 384 | 599 | 333 | 542 | 1.17e-22 | 103 |
Find 136 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCCACCTCCACCTGATTT+AGG | 0.188041 | 4_3:-69052030 | Msa0658880:CDS |
| TTCTCAGCAACATTATTTAA+AGG | 0.197214 | 4_3:+69052213 | None:intergenic |
| CAACGATGCTTCGGAAAATT+TGG | 0.223748 | 4_3:+69048309 | None:intergenic |
| GATAGGGAAGTCGTCTAAAT+TGG | 0.277408 | 4_3:-69051403 | Msa0658880:intron |
| CTAGAAGAAATCGAGTTATT+TGG | 0.303994 | 4_3:-69048730 | Msa0658880:CDS |
| TTCATTCGAGCTTCGGAATC+TGG | 0.314092 | 4_3:-69051616 | Msa0658880:CDS |
| AGAGTTGTATCCGCAACTTC+TGG | 0.320251 | 4_3:-69049083 | Msa0658880:CDS |
| TCTCTTAGAAATGTTGGTAT+AGG | 0.323214 | 4_3:-69052333 | Msa0658880:CDS |
| GTAGAAACAGGTGTTGAAAA+AGG | 0.341916 | 4_3:+69052156 | None:intergenic |
| TCTTGGGATTTCTTTGACCC+TGG | 0.346261 | 4_3:-69052003 | Msa0658880:CDS |
| ACCTGATTTAGGTGCATCTT+GGG | 0.359970 | 4_3:-69052019 | Msa0658880:CDS |
| CACCTGATTTAGGTGCATCT+TGG | 0.372611 | 4_3:-69052020 | Msa0658880:CDS |
| TGAAGATGTATGAAGATATC+AGG | 0.386728 | 4_3:-69048288 | Msa0658880:CDS |
| CTATGCCGTGATTGGTGTGC+TGG | 0.391046 | 4_3:-69048556 | Msa0658880:CDS |
| ACTGTTACACTTGATGCTTT+TGG | 0.397959 | 4_3:-69052096 | Msa0658880:CDS |
| GAAGAGTTCTGCATGATTGC+TGG | 0.403935 | 4_3:-69049652 | Msa0658880:CDS |
| TGAAGCATTGAGTTTATGTA+AGG | 0.411378 | 4_3:-69052430 | Msa0658880:CDS |
| AAATCTTGATGTGGCTGAAA+AGG | 0.414732 | 4_3:-69051788 | Msa0658880:CDS |
| AGATGTTTCAAGGCTGTTAG+AGG | 0.416903 | 4_3:-69051590 | Msa0658880:CDS |
| TTGCTCCTGGTACGTTCCCT+TGG | 0.417781 | 4_3:+69048625 | None:intergenic |
| TCCCTTTGGCTTCAAAATCA+AGG | 0.418316 | 4_3:-69049708 | Msa0658880:CDS |
| AGTCTTTCTGCGGCAACAAA+CGG | 0.422249 | 4_3:+69051359 | None:intergenic |
| GTCTTTCTGCGGCAACAAAC+GGG | 0.424934 | 4_3:+69051360 | None:intergenic |
| ATTCAATCTCTTAGAAATGT+TGG | 0.425409 | 4_3:-69052339 | Msa0658880:CDS |
| TAAAACTTACCCTGGAAAAC+AGG | 0.428606 | 4_3:+69051333 | None:intergenic |
| TGATTGGTGTGCTGGGATCC+AGG | 0.432860 | 4_3:-69048548 | Msa0658880:CDS |
| GTTCTCCCCTCGTCGAGCTC+TGG | 0.440226 | 4_3:-69048596 | Msa0658880:CDS |
| GTTGTTTCAAGTGGAGTTGA+AGG | 0.443756 | 4_3:-69051880 | Msa0658880:CDS |
| GCATAGGTTCATTCGAGCTT+CGG | 0.444759 | 4_3:-69051623 | Msa0658880:CDS |
| ATTTCTCTGCGTGCATCTCC+TGG | 0.446501 | 4_3:+69048766 | None:intergenic |
| AGTTGAAGGTTGCAAACAAT+TGG | 0.447867 | 4_3:-69051866 | Msa0658880:CDS |
| ATACATCTTCAACGATGCTT+CGG | 0.449747 | 4_3:+69048300 | None:intergenic |
| ATCCTCGTCCAGGATCCCTT+TGG | 0.450789 | 4_3:-69049722 | Msa0658880:CDS |
| TCCCAAGATGCACCTAAATC+AGG | 0.460107 | 4_3:+69052018 | None:intergenic |
| AGGGATCAGTGGTTACAAAC+TGG | 0.463236 | 4_3:-69051919 | Msa0658880:CDS |
| TGTCGATCACTTGAGTGCCT+TGG | 0.466505 | 4_3:+69049203 | None:intergenic |
| AAGGGTAACTAGTTTGAGAT+GGG | 0.468402 | 4_3:+69052247 | None:intergenic |
| CTAGTGAGTTCAAAGATTGC+AGG | 0.471719 | 4_3:-69051939 | Msa0658880:CDS |
| TATCATTCTAGAAACTCAAC+AGG | 0.473291 | 4_3:-69048796 | Msa0658880:CDS |
| AGGGAAGATATTGATGATAG+TGG | 0.475279 | 4_3:-69049688 | Msa0658880:CDS |
| GCGGCAACAAACGGGCTGAA+TGG | 0.475599 | 4_3:+69051368 | None:intergenic |
| AAACTCTCACTATCCTCTCC+AGG | 0.476724 | 4_3:+69051985 | None:intergenic |
| AACTCAACAGGAACCTTGCC+AGG | 0.477981 | 4_3:-69048784 | Msa0658880:CDS |
| AGAATGATATGCCAAGGAAA+TGG | 0.481755 | 4_3:+69048810 | None:intergenic |
| ATGTAACTAACAGTAGAAAC+AGG | 0.481798 | 4_3:+69052144 | None:intergenic |
| GTCGGATCTTCACAATCTGA+TGG | 0.481913 | 4_3:-69048482 | Msa0658880:CDS |
| AAATAATGTTGCTGAGAATG+AGG | 0.483016 | 4_3:-69052208 | Msa0658880:CDS |
| ATTGAGAGCTTCCACATATG+AGG | 0.489050 | 4_3:+69048675 | None:intergenic |
| CCTAAATCAGGTGGAGGTGG+AGG | 0.489973 | 4_3:+69052030 | None:intergenic |
| CTCAAGTGATCGACAAGACC+AGG | 0.490823 | 4_3:-69049195 | Msa0658880:CDS |
| TTGCAAATTGATGTCTAAGC+TGG | 0.494038 | 4_3:+69049230 | None:intergenic |
| CCCTTGACAGATTGTATGCA+TGG | 0.498810 | 4_3:-69049615 | Msa0658880:CDS |
| GAAGGGTAACTAGTTTGAGA+TGG | 0.502033 | 4_3:+69052246 | None:intergenic |
| GAGGCAAACAAAATCAAGGT+TGG | 0.504074 | 4_3:-69051571 | Msa0658880:CDS |
| ACATTATTTAAAGGTGATGA+AGG | 0.505480 | 4_3:+69052222 | None:intergenic |
| TCTGCGTGCATCTCCTGGCA+AGG | 0.512870 | 4_3:+69048771 | None:intergenic |
| GCAATACATCACCATTTCCT+TGG | 0.515910 | 4_3:-69048821 | Msa0658880:CDS |
| AATCTTGATGTGGCTGAAAA+GGG | 0.516350 | 4_3:-69051787 | Msa0658880:CDS |
| GCACCAGGTGGTACTGTTGG+TGG | 0.519535 | 4_3:-69051817 | Msa0658880:CDS |
| CCCTTTGGCTTCAAAATCAA+GGG | 0.522038 | 4_3:-69049707 | Msa0658880:CDS |
| TGCAGGCTAGTGAATCCATC+AGG | 0.522957 | 4_3:-69049276 | Msa0658880:intron |
| GCACCTAAATCAGGTGGAGG+TGG | 0.527111 | 4_3:+69052027 | None:intergenic |
| AATCTGGTAGAGATGTTTCA+AGG | 0.529347 | 4_3:-69051600 | Msa0658880:CDS |
| ATGGCTGGTGCAGATTGGTC+AGG | 0.532640 | 4_3:-69048876 | Msa0658880:intron |
| GCTGAAAAGGGTGTTGATGT+TGG | 0.534362 | 4_3:-69051775 | Msa0658880:CDS |
| GAGGCACCAGGTGGTACTGT+TGG | 0.534851 | 4_3:-69051820 | Msa0658880:CDS |
| CAGATCCTTCACAACTGCCC+TGG | 0.535042 | 4_3:+69049177 | None:intergenic |
| AAAACTCTATGATGAAGTAA+AGG | 0.535638 | 4_3:-69049587 | Msa0658880:intron |
| GTGAGACAGTTGGAGGCACC+AGG | 0.540258 | 4_3:-69051832 | Msa0658880:CDS |
| GATCCTTCAGTTGTTTCAAG+TGG | 0.540416 | 4_3:-69051889 | Msa0658880:CDS |
| ATCTGTCAAGGGTGGACGAA+TGG | 0.540817 | 4_3:+69049626 | None:intergenic |
| GGTGCAGATTGGTCAGGATG+TGG | 0.543685 | 4_3:-69048870 | Msa0658880:intron |
| TTTAAAGGTGATGAAGGAGA+AGG | 0.544934 | 4_3:+69052228 | None:intergenic |
| AGCCAAAGGGATCCTGGACG+AGG | 0.548609 | 4_3:+69049720 | None:intergenic |
| AGGGTAACTAGTTTGAGATG+GGG | 0.549838 | 4_3:+69052248 | None:intergenic |
| TTAAAGGTGATGAAGGAGAA+GGG | 0.551244 | 4_3:+69052229 | None:intergenic |
| GGTTGCAAACAATTGGATGA+TGG | 0.552751 | 4_3:-69051859 | Msa0658880:CDS |
| CAAGACCAGGGCAGTTGTGA+AGG | 0.553295 | 4_3:-69049182 | Msa0658880:CDS |
| TGGAAGATCAAGTTCAAAGA+AGG | 0.553913 | 4_3:-69051755 | Msa0658880:CDS |
| TAACAGCCACACCTCATATG+TGG | 0.556807 | 4_3:-69048686 | Msa0658880:CDS |
| TCATATGTGGAAGCTCTCAA+TGG | 0.556987 | 4_3:-69048673 | Msa0658880:CDS |
| TATGCCGTGATTGGTGTGCT+GGG | 0.557768 | 4_3:-69048555 | Msa0658880:CDS |
| GTTCTTCAGAGGGTAAAGCC+TGG | 0.558364 | 4_3:+69048530 | None:intergenic |
| GTTAGAGGCAAACAAAATCA+AGG | 0.561899 | 4_3:-69051575 | Msa0658880:CDS |
| AGAGCTCGACGAGGGGAGAA+CGG | 0.563598 | 4_3:+69048598 | None:intergenic |
| AATTATTAGTTGGAAAAGGA+CGG | 0.568108 | 4_3:-69049758 | Msa0658880:CDS |
| CCCATGCATACAATCTGTCA+AGG | 0.568925 | 4_3:+69049614 | None:intergenic |
| AAAGGACTTTCATTATGCAA+AGG | 0.572304 | 4_3:+69052174 | None:intergenic |
| TCGATCATAGACCTTCCTGA+TGG | 0.573804 | 4_3:+69049261 | None:intergenic |
| GTTAGTTACATGAGATCAAG+TGG | 0.575677 | 4_3:-69052132 | Msa0658880:CDS |
| TGCATCACTAAGTTCTTCAG+AGG | 0.575975 | 4_3:+69048519 | None:intergenic |
| ATCAAGTTCAAAGAAGGAGG+AGG | 0.577099 | 4_3:-69051749 | Msa0658880:CDS |
| AAATGTATGTGCAGAAAGAG+AGG | 0.582813 | 4_3:-69051707 | Msa0658880:CDS |
| TCAAAGATTGCAGGGATCAG+TGG | 0.583599 | 4_3:-69051930 | Msa0658880:CDS |
| GGTCAGTCGATCAAGAACCT+TGG | 0.587010 | 4_3:+69048330 | None:intergenic |
| TGATGGAAATGTGAGACAGT+TGG | 0.589991 | 4_3:-69051842 | Msa0658880:CDS |
| TGGAGCCAGAGCTCGACGAG+GGG | 0.590546 | 4_3:+69048591 | None:intergenic |
| GGATTTCTTTGACCCTGGAG+AGG | 0.591300 | 4_3:-69051998 | Msa0658880:CDS |
| GGATCCCAGCACACCAATCA+CGG | 0.597262 | 4_3:+69048551 | None:intergenic |
| CACGCAGAGAAATAATGACT+CGG | 0.598054 | 4_3:-69048756 | Msa0658880:CDS |
| GTTTCTAGAATGATATGCCA+AGG | 0.600015 | 4_3:+69048804 | None:intergenic |
| ACTCCACTTGAAACAACTGA+AGG | 0.600121 | 4_3:+69051886 | None:intergenic |
| CAACTTCTGGAATTAACAGA+GGG | 0.600751 | 4_3:-69049070 | Msa0658880:CDS |
| AACTCTCACTATCCTCTCCA+GGG | 0.602519 | 4_3:+69051986 | None:intergenic |
| TAGTGAGTTCAAAGATTGCA+GGG | 0.604008 | 4_3:-69051938 | Msa0658880:CDS |
| GTGGAGCCAGAGCTCGACGA+GGG | 0.610750 | 4_3:+69048590 | None:intergenic |
| CTGTGAGTGATGAACTCTGA+AGG | 0.613324 | 4_3:+69051682 | None:intergenic |
| AAGATCAAGTTCAAAGAAGG+AGG | 0.618527 | 4_3:-69051752 | Msa0658880:CDS |
| CCTTGACAGATTGTATGCAT+GGG | 0.619343 | 4_3:-69049614 | Msa0658880:CDS |
| GATGCACCTAAATCAGGTGG+AGG | 0.625726 | 4_3:+69052024 | None:intergenic |
| TGCATACAATCTGTCAAGGG+TGG | 0.626878 | 4_3:+69049618 | None:intergenic |
| ATGTGGAAGCTCTCAATGGT+TGG | 0.626950 | 4_3:-69048669 | Msa0658880:CDS |
| GCATCACTAAGTTCTTCAGA+GGG | 0.627690 | 4_3:+69048520 | None:intergenic |
| CAAGATGCACCTAAATCAGG+TGG | 0.629553 | 4_3:+69052021 | None:intergenic |
| CAGATTGGTCAGGATGTGGA+AGG | 0.631108 | 4_3:-69048866 | Msa0658880:CDS |
| TCTGCACTCGCGAATTAGAG+TGG | 0.639191 | 4_3:-69049158 | Msa0658880:CDS |
| GGCTAGTGAATCCATCAGGA+AGG | 0.642992 | 4_3:-69049272 | Msa0658880:CDS |
| TCTGTTAATTCCAGAAGTTG+CGG | 0.644448 | 4_3:+69049073 | None:intergenic |
| GCATAAAGGATATAGAGCAT+AGG | 0.644705 | 4_3:-69051639 | Msa0658880:CDS |
| CCATGCATACAATCTGTCAA+GGG | 0.647379 | 4_3:+69049615 | None:intergenic |
| TGTACATGCAAGTTTAACCA+AGG | 0.665329 | 4_3:-69048347 | Msa0658880:CDS |
| TCACCACCAACAGTACCACC+TGG | 0.666374 | 4_3:+69051814 | None:intergenic |
| CATCAATTTGCAAAAGACCA+AGG | 0.673397 | 4_3:-69049220 | Msa0658880:CDS |
| GAAGGAGGAGGAGAAGAACA+TGG | 0.678950 | 4_3:-69051737 | Msa0658880:CDS |
| AAACAGGTGAAGTCTTTCTG+CGG | 0.683062 | 4_3:+69051349 | None:intergenic |
| TGGAAATGTGAGACAGTTGG+AGG | 0.684589 | 4_3:-69051839 | Msa0658880:CDS |
| TGGTGACATAAATCTTGATG+TGG | 0.685432 | 4_3:-69051797 | Msa0658880:CDS |
| ATCAAAACTAATGAAGACAG+CGG | 0.696867 | 4_3:-69048394 | Msa0658880:CDS |
| GCAACTTCTGGAATTAACAG+AGG | 0.697401 | 4_3:-69049071 | Msa0658880:CDS |
| GAGCTTCCACATATGAGGTG+TGG | 0.703175 | 4_3:+69048680 | None:intergenic |
| TCAAGTGATCGACAAGACCA+GGG | 0.705692 | 4_3:-69049194 | Msa0658880:CDS |
| AAAACTAATGAAGACAGCGG+AGG | 0.716696 | 4_3:-69048391 | Msa0658880:CDS |
| AGACAGTTGGAGGCACCAGG+TGG | 0.721500 | 4_3:-69051829 | Msa0658880:CDS |
| GGTGGAGCCAGAGCTCGACG+AGG | 0.727010 | 4_3:+69048589 | None:intergenic |
| AGGTGGAGGAGAAAACACAT+TGG | 0.737795 | 4_3:+69052044 | None:intergenic |
| AACTTCTGGAATTAACAGAG+GGG | 0.764599 | 4_3:-69049069 | Msa0658880:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAACTAATATCATAAAAA+AGG | - | chr4_3:69051120-69051139 | Msa0658880:intron | 10.0% |
| !! | ATAACTAATATCATAAAAAA+GGG | - | chr4_3:69051121-69051140 | Msa0658880:intron | 10.0% |
| !! | AAACATATATGTAATGTTTA+AGG | + | chr4_3:69049437-69049456 | None:intergenic | 15.0% |
| !! | AAACAAAAACAACAAAAATA+AGG | + | chr4_3:69050380-69050399 | None:intergenic | 15.0% |
| !!! | TTTTTGTTTTTATGAAATAG+TGG | - | chr4_3:69050391-69050410 | Msa0658880:intron | 15.0% |
| !!! | TTTGACTTGAAATATTAATA+CGG | - | chr4_3:69050862-69050881 | Msa0658880:intron | 15.0% |
| !! | AAAAAATTATTAGTTGGAAA+AGG | - | chr4_3:69050922-69050941 | Msa0658880:intron | 15.0% |
| !! | TAACTAATATCATAAAAAAG+GGG | - | chr4_3:69051122-69051141 | Msa0658880:intron | 15.0% |
| !! | TAAAAGAATTGAAAAAATGA+GGG | - | chr4_3:69051574-69051593 | Msa0658880:CDS | 15.0% |
| !!! | TATAACTACTATTTGATTTA+TGG | - | chr4_3:69051740-69051759 | Msa0658880:CDS | 15.0% |
| !!! | TATAACTACTATTTGATTTA+TGG | - | chr4_3:69051740-69051759 | Msa0658880:CDS | 15.0% |
| !!! | GGAAAGAAAAAGTTTTATTA+AGG | - | chr4_3:69048275-69048294 | Msa0658880:CDS | 20.0% |
| !!! | AAGAAAAAGTTTTATTAAGG+TGG | - | chr4_3:69048278-69048297 | Msa0658880:CDS | 20.0% |
| !!! | TTTTGTGTATAAAATGCAAT+TGG | - | chr4_3:69049196-69049215 | Msa0658880:CDS | 20.0% |
| !! | ACATTACATATATGTTTGTT+TGG | - | chr4_3:69049440-69049459 | Msa0658880:intron | 20.0% |
| !! | CATTACATATATGTTTGTTT+GGG | - | chr4_3:69049441-69049460 | Msa0658880:intron | 20.0% |
| !!! | TCATCTTATTTTTCAAGAAA+TGG | + | chr4_3:69049471-69049490 | None:intergenic | 20.0% |
| !!! | AAACATGAATGATTTTCATT+TGG | - | chr4_3:69049591-69049610 | Msa0658880:CDS | 20.0% |
| !!! | ATGATTTTCATTTGGAATTT+TGG | - | chr4_3:69049599-69049618 | Msa0658880:CDS | 20.0% |
| !! | AAGGCTAATAAAGAAAAAAA+TGG | - | chr4_3:69049833-69049852 | Msa0658880:intron | 20.0% |
| !! | TTTCTCTTAAAATGAAATAG+CGG | + | chr4_3:69050035-69050054 | None:intergenic | 20.0% |
| !! | CTGTTAAACAAAAAAATAAC+AGG | + | chr4_3:69050190-69050209 | None:intergenic | 20.0% |
| !!! | CAACTAATAATTTTTTGTAC+AGG | + | chr4_3:69050918-69050937 | None:intergenic | 20.0% |
| !! | CTGTACAAAAAATTATTAGT+TGG | - | chr4_3:69050916-69050935 | Msa0658880:intron | 20.0% |
| !! | AACTAAATACTCATGTAAAT+TGG | + | chr4_3:69051226-69051245 | None:intergenic | 20.0% |
| !! | ACTATTGAAACTATGAAAAT+TGG | + | chr4_3:69051354-69051373 | None:intergenic | 20.0% |
| !! | CTAAAAGAATTGAAAAAATG+AGG | - | chr4_3:69051573-69051592 | Msa0658880:CDS | 20.0% |
| ! | ATTCAATCTCTTAGAAATGT+TGG | - | chr4_3:69048345-69048364 | Msa0658880:CDS | 25.0% |
| ! | ACATTATTTAAAGGTGATGA+AGG | + | chr4_3:69048465-69048484 | None:intergenic | 25.0% |
| ! | TTCTCAGCAACATTATTTAA+AGG | + | chr4_3:69048474-69048493 | None:intergenic | 25.0% |
| !!! | AGATTTTCTTTCTAGCATAA+AGG | - | chr4_3:69049031-69049050 | Msa0658880:intron | 25.0% |
| ! | CATGAAGTTATTCACTTATT+TGG | - | chr4_3:69049645-69049664 | Msa0658880:CDS | 25.0% |
| !! | AGTTTTCCTTCATAGAAAAA+AGG | - | chr4_3:69049692-69049711 | Msa0658880:CDS | 25.0% |
| !!! | TTTTTTCTTTATTAGCCTTG+TGG | + | chr4_3:69049832-69049851 | None:intergenic | 25.0% |
| ! | AGAAAATACAAAATTGTCCT+TGG | - | chr4_3:69050050-69050069 | Msa0658880:intron | 25.0% |
| ! | TCCTTGGTTTAAAAAAAACA+AGG | - | chr4_3:69050066-69050085 | Msa0658880:intron | 25.0% |
| ! | CCTTGGTTTAAAAAAAACAA+GGG | - | chr4_3:69050067-69050086 | Msa0658880:intron | 25.0% |
| ! | CCATAATAACAAAGAAAACT+AGG | + | chr4_3:69050246-69050265 | None:intergenic | 25.0% |
| !!! | CCTAGTTTTCTTTGTTATTA+TGG | - | chr4_3:69050243-69050262 | Msa0658880:intron | 25.0% |
| !! | GTTTTATATGAACAAAACAG+AGG | + | chr4_3:69050323-69050342 | None:intergenic | 25.0% |
| ! | AAAACCATAGTAGTTAATAG+CGG | + | chr4_3:69050478-69050497 | None:intergenic | 25.0% |
| ! | ATCTTGATAGAAACTAGAAA+TGG | - | chr4_3:69050600-69050619 | Msa0658880:intron | 25.0% |
| ! | TACAGGTTCTATACATAAAA+GGG | + | chr4_3:69050901-69050920 | None:intergenic | 25.0% |
| ! | AATTATTAGTTGGAAAAGGA+CGG | - | chr4_3:69050926-69050945 | Msa0658880:intron | 25.0% |
| ! | AAAACTCTATGATGAAGTAA+AGG | - | chr4_3:69051097-69051116 | Msa0658880:intron | 25.0% |
| !! | AAAGTATTTCTAACTGGATA+AGG | - | chr4_3:69051153-69051172 | Msa0658880:intron | 25.0% |
| ! | AAGGAATAAAAACATTCAGA+GGG | + | chr4_3:69051269-69051288 | None:intergenic | 25.0% |
| ! | AAAGGAATAAAAACATTCAG+AGG | + | chr4_3:69051270-69051289 | None:intergenic | 25.0% |
| !!! | GAATGTTTTTATTCCTTTCA+AGG | - | chr4_3:69051272-69051291 | Msa0658880:intron | 25.0% |
| !! | TGAAGCATTGAGTTTATGTA+AGG | - | chr4_3:69048254-69048273 | Msa0658880:CDS | 30.0% |
| TCTCTTAGAAATGTTGGTAT+AGG | - | chr4_3:69048351-69048370 | Msa0658880:CDS | 30.0% | |
| AAATAATGTTGCTGAGAATG+AGG | - | chr4_3:69048476-69048495 | Msa0658880:CDS | 30.0% | |
| AAAGGACTTTCATTATGCAA+AGG | + | chr4_3:69048513-69048532 | None:intergenic | 30.0% | |
| ATGTAACTAACAGTAGAAAC+AGG | + | chr4_3:69048543-69048562 | None:intergenic | 30.0% | |
| AAATAGGTTAAAACTTACCC+TGG | + | chr4_3:69049362-69049381 | None:intergenic | 30.0% | |
| TAGTGTCTGTATACAGAAAT+AGG | + | chr4_3:69049378-69049397 | None:intergenic | 30.0% | |
| AATCTTTAGCAGCTAAATGA+TGG | - | chr4_3:69049405-69049424 | Msa0658880:intron | 30.0% | |
| ATCTTTAGCAGCTAAATGAT+GGG | - | chr4_3:69049406-69049425 | Msa0658880:intron | 30.0% | |
| AAACTAAACGTTCATCAAAG+TGG | + | chr4_3:69049565-69049584 | None:intergenic | 30.0% | |
| ACTTTGATGAACGTTTAGTT+TGG | - | chr4_3:69049564-69049583 | Msa0658880:intron | 30.0% | |
| ! | TTTGGATGTCTATTAGTTTG+TGG | - | chr4_3:69049663-69049682 | Msa0658880:CDS | 30.0% |
| !! | TTGGATGTCTATTAGTTTGT+GGG | - | chr4_3:69049664-69049683 | Msa0658880:CDS | 30.0% |
| !!! | TTTGCCGATTTTGTACAAAA+TGG | + | chr4_3:69049720-69049739 | None:intergenic | 30.0% |
| AATGCATATCAAACATGTAG+CGG | - | chr4_3:69049738-69049757 | Msa0658880:CDS | 30.0% | |
| !!! | CCCTTGTTTTTTTTAAACCA+AGG | + | chr4_3:69050070-69050089 | None:intergenic | 30.0% |
| AACTAGGACAAAAAAGTAAC+AGG | + | chr4_3:69050230-69050249 | None:intergenic | 30.0% | |
| GTACAGGTTCTATACATAAA+AGG | + | chr4_3:69050902-69050921 | None:intergenic | 30.0% | |
| !! | CAGTTGAAAGTATTTCTAAC+TGG | - | chr4_3:69051147-69051166 | Msa0658880:intron | 30.0% |
| ATAAAAACATTCAGAGGGAA+GGG | + | chr4_3:69051264-69051283 | None:intergenic | 30.0% | |
| AATAAAAACATTCAGAGGGA+AGG | + | chr4_3:69051265-69051284 | None:intergenic | 30.0% | |
| ATATAGATAGTTAAGCTTCG+AGG | + | chr4_3:69051675-69051694 | None:intergenic | 30.0% | |
| ! | ACTACTATTTGATTTATGGC+TGG | - | chr4_3:69051744-69051763 | Msa0658880:CDS | 30.0% |
| ! | TATCATTCTAGAAACTCAAC+AGG | - | chr4_3:69051888-69051907 | Msa0658880:CDS | 30.0% |
| CTAGAAGAAATCGAGTTATT+TGG | - | chr4_3:69051954-69051973 | Msa0658880:CDS | 30.0% | |
| ! | AACACTGTATACTTTTACCA+AGG | - | chr4_3:69052042-69052061 | Msa0658880:CDS | 30.0% |
| ! | ACACTGTATACTTTTACCAA+GGG | - | chr4_3:69052043-69052062 | Msa0658880:CDS | 30.0% |
| ! | TGCAATCAGAAACTTTTTGT+CGG | - | chr4_3:69052184-69052203 | Msa0658880:CDS | 30.0% |
| ATCAAAACTAATGAAGACAG+CGG | - | chr4_3:69052290-69052309 | Msa0658880:CDS | 30.0% | |
| TGAAGATGTATGAAGATATC+AGG | - | chr4_3:69052396-69052415 | Msa0658880:CDS | 30.0% | |
| ! | AAGGGTAACTAGTTTGAGAT+GGG | + | chr4_3:69048440-69048459 | None:intergenic | 35.0% |
| TTAAAGGTGATGAAGGAGAA+GGG | + | chr4_3:69048458-69048477 | None:intergenic | 35.0% | |
| TTTAAAGGTGATGAAGGAGA+AGG | + | chr4_3:69048459-69048478 | None:intergenic | 35.0% | |
| !! | GTAGAAACAGGTGTTGAAAA+AGG | + | chr4_3:69048531-69048550 | None:intergenic | 35.0% |
| GTTAGTTACATGAGATCAAG+TGG | - | chr4_3:69048552-69048571 | Msa0658880:CDS | 35.0% | |
| ! | ACTGTTACACTTGATGCTTT+TGG | - | chr4_3:69048588-69048607 | Msa0658880:CDS | 35.0% |
| !!! | AGTTTTAGGTTTGTAGTGCA+TGG | - | chr4_3:69048717-69048736 | Msa0658880:CDS | 35.0% |
| TAGTGAGTTCAAAGATTGCA+GGG | - | chr4_3:69048746-69048765 | Msa0658880:CDS | 35.0% | |
| AGTTGAAGGTTGCAAACAAT+TGG | - | chr4_3:69048818-69048837 | Msa0658880:CDS | 35.0% | |
| TGGTGACATAAATCTTGATG+TGG | - | chr4_3:69048887-69048906 | Msa0658880:intron | 35.0% | |
| AAATCTTGATGTGGCTGAAA+AGG | - | chr4_3:69048896-69048915 | Msa0658880:intron | 35.0% | |
| AATCTTGATGTGGCTGAAAA+GGG | - | chr4_3:69048897-69048916 | Msa0658880:intron | 35.0% | |
| TGGAAGATCAAGTTCAAAGA+AGG | - | chr4_3:69048929-69048948 | Msa0658880:intron | 35.0% | |
| AAGATCAAGTTCAAAGAAGG+AGG | - | chr4_3:69048932-69048951 | Msa0658880:intron | 35.0% | |
| AAATGTATGTGCAGAAAGAG+AGG | - | chr4_3:69048977-69048996 | Msa0658880:intron | 35.0% | |
| GCATAAAGGATATAGAGCAT+AGG | - | chr4_3:69049045-69049064 | Msa0658880:intron | 35.0% | |
| AATCTGGTAGAGATGTTTCA+AGG | - | chr4_3:69049084-69049103 | Msa0658880:CDS | 35.0% | |
| GTTAGAGGCAAACAAAATCA+AGG | - | chr4_3:69049109-69049128 | Msa0658880:CDS | 35.0% | |
| ! | GTTGGATTTTCTGATGCTAA+AGG | - | chr4_3:69049131-69049150 | Msa0658880:CDS | 35.0% |
| ATCTTCTTCAGACTTCTGAT+AGG | - | chr4_3:69049264-69049283 | Msa0658880:CDS | 35.0% | |
| TCTTCTTCAGACTTCTGATA+GGG | - | chr4_3:69049265-69049284 | Msa0658880:CDS | 35.0% | |
| TAAAACTTACCCTGGAAAAC+AGG | + | chr4_3:69049354-69049373 | None:intergenic | 35.0% | |
| ! | GAGCTTGTGTCTTTTTAATG+AGG | + | chr4_3:69049496-69049515 | None:intergenic | 35.0% |
| !!! | ATGGAGCCTTTTTTCTATGA+AGG | + | chr4_3:69049701-69049720 | None:intergenic | 35.0% |
| ! | GGCTCCATTTTGTACAAAAT+CGG | - | chr4_3:69049713-69049732 | Msa0658880:CDS | 35.0% |
| AAGCTAAGTATGTTGACATG+AGG | - | chr4_3:69049870-69049889 | Msa0658880:intron | 35.0% | |
| TTACCCATAGTAGTCAATAG+CGG | - | chr4_3:69049895-69049914 | Msa0658880:intron | 35.0% | |
| ! | TATCCCGCTATAGCATTTTT+GGG | - | chr4_3:69050430-69050449 | Msa0658880:intron | 35.0% |
| !! | TAGTAGTTAATAGCGGATAG+CGG | + | chr4_3:69050471-69050490 | None:intergenic | 35.0% |
| CTATCCGCTATTAACTACTA+TGG | - | chr4_3:69050471-69050490 | Msa0658880:intron | 35.0% | |
| !! | GTGTTTCAAAACTTGTTGCA+AGG | + | chr4_3:69050502-69050521 | None:intergenic | 35.0% |
| !!! | CAACAAGTTTTGAAACACAG+AGG | - | chr4_3:69050504-69050523 | Msa0658880:intron | 35.0% |
| !!! | TTCAAGTCTAGTGCCTTTTT+TGG | - | chr4_3:69050793-69050812 | Msa0658880:intron | 35.0% |
| ! | ATAGATTAGCTGGCCAAAAA+AGG | + | chr4_3:69050809-69050828 | None:intergenic | 35.0% |
| ! | AGGGAAGATATTGATGATAG+TGG | - | chr4_3:69050996-69051015 | Msa0658880:intron | 35.0% |
| TAAAAACATTCAGAGGGAAG+GGG | + | chr4_3:69051263-69051282 | None:intergenic | 35.0% | |
| TTTATTCCTTTCAAGGACAC+AGG | - | chr4_3:69051279-69051298 | Msa0658880:intron | 35.0% | |
| AATTATCCTGTGTCCTTGAA+AGG | + | chr4_3:69051288-69051307 | None:intergenic | 35.0% | |
| TTGCAAATTGATGTCTAAGC+TGG | + | chr4_3:69051457-69051476 | None:intergenic | 35.0% | |
| CATCAATTTGCAAAAGACCA+AGG | - | chr4_3:69051464-69051483 | Msa0658880:intron | 35.0% | |
| TCTGTTAATTCCAGAAGTTG+CGG | + | chr4_3:69051614-69051633 | None:intergenic | 35.0% | |
| !! | CAACTTCTGGAATTAACAGA+GGG | - | chr4_3:69051614-69051633 | Msa0658880:CDS | 35.0% |
| !! | AACTTCTGGAATTAACAGAG+GGG | - | chr4_3:69051615-69051634 | Msa0658880:CDS | 35.0% |
| AGAATGATATGCCAAGGAAA+TGG | + | chr4_3:69051877-69051896 | None:intergenic | 35.0% | |
| !! | GTTTCTAGAATGATATGCCA+AGG | + | chr4_3:69051883-69051902 | None:intergenic | 35.0% |
| TCACGGCATAGAACAAAAAT+AGG | + | chr4_3:69052119-69052138 | None:intergenic | 35.0% | |
| ! | TTTTTGTTCTATGCCGTGAT+TGG | - | chr4_3:69052120-69052139 | Msa0658880:CDS | 35.0% |
| !!! | TTAGTTTTGATCTCGCTTTC+TGG | + | chr4_3:69052281-69052300 | None:intergenic | 35.0% |
| TGTACATGCAAGTTTAACCA+AGG | - | chr4_3:69052337-69052356 | Msa0658880:CDS | 35.0% | |
| ATACATCTTCAACGATGCTT+CGG | + | chr4_3:69052387-69052406 | None:intergenic | 35.0% | |
| TATCAGGCAAAAAAGTGAAG+TGG | - | chr4_3:69052412-69052431 | Msa0658880:CDS | 35.0% | |
| ! | AGGGTAACTAGTTTGAGATG+GGG | + | chr4_3:69048439-69048458 | None:intergenic | 40.0% |
| ! | GAAGGGTAACTAGTTTGAGA+TGG | + | chr4_3:69048441-69048460 | None:intergenic | 40.0% |
| ACCTGATTTAGGTGCATCTT+GGG | - | chr4_3:69048665-69048684 | Msa0658880:CDS | 40.0% | |
| ! | GAGAGGATAGTGAGAGTTTT+AGG | - | chr4_3:69048703-69048722 | Msa0658880:CDS | 40.0% |
| CTAGTGAGTTCAAAGATTGC+AGG | - | chr4_3:69048745-69048764 | Msa0658880:CDS | 40.0% | |
| ! | GATCCTTCAGTTGTTTCAAG+TGG | - | chr4_3:69048795-69048814 | Msa0658880:CDS | 40.0% |
| ACTCCACTTGAAACAACTGA+AGG | + | chr4_3:69048801-69048820 | None:intergenic | 40.0% | |
| ! | GTTGTTTCAAGTGGAGTTGA+AGG | - | chr4_3:69048804-69048823 | Msa0658880:CDS | 40.0% |
| GGTTGCAAACAATTGGATGA+TGG | - | chr4_3:69048825-69048844 | Msa0658880:CDS | 40.0% | |
| TGATGGAAATGTGAGACAGT+TGG | - | chr4_3:69048842-69048861 | Msa0658880:CDS | 40.0% | |
| ATCAAGTTCAAAGAAGGAGG+AGG | - | chr4_3:69048935-69048954 | Msa0658880:intron | 40.0% | |
| AGATGTTTCAAGGCTGTTAG+AGG | - | chr4_3:69049094-69049113 | Msa0658880:CDS | 40.0% | |
| GAGGCAAACAAAATCAAGGT+TGG | - | chr4_3:69049113-69049132 | Msa0658880:CDS | 40.0% | |
| GATAGGGAAGTCGTCTAAAT+TGG | - | chr4_3:69049281-69049300 | Msa0658880:intron | 40.0% | |
| AAACAGGTGAAGTCTTTCTG+CGG | + | chr4_3:69049338-69049357 | None:intergenic | 40.0% | |
| ! | AAAGACTTCACCTGTTTTCC+AGG | - | chr4_3:69049341-69049360 | Msa0658880:intron | 40.0% |
| ! | AAGACTTCACCTGTTTTCCA+GGG | - | chr4_3:69049342-69049361 | Msa0658880:intron | 40.0% |
| TCAATGCCTAGCAATAGAAC+AGG | - | chr4_3:69049800-69049819 | Msa0658880:intron | 40.0% | |
| ! | CTATCCCGCTATAGCATTTT+TGG | - | chr4_3:69050429-69050448 | Msa0658880:intron | 40.0% |
| ! | ATCCCGCTATAGCATTTTTG+GGG | - | chr4_3:69050431-69050450 | Msa0658880:intron | 40.0% |
| TGACCCCAAAAATGCTATAG+CGG | + | chr4_3:69050437-69050456 | None:intergenic | 40.0% | |
| AGCGTAGCTAATAGATTAGC+TGG | + | chr4_3:69050819-69050838 | None:intergenic | 40.0% | |
| ! | TCCCTTTGGCTTCAAAATCA+AGG | - | chr4_3:69050976-69050995 | Msa0658880:intron | 40.0% |
| !!! | CCCTTGATTTTGAAGCCAAA+GGG | + | chr4_3:69050980-69050999 | None:intergenic | 40.0% |
| ! | CCCTTTGGCTTCAAAATCAA+GGG | - | chr4_3:69050977-69050996 | Msa0658880:intron | 40.0% |
| !!! | TCCCTTGATTTTGAAGCCAA+AGG | + | chr4_3:69050981-69051000 | None:intergenic | 40.0% |
| CCATGCATACAATCTGTCAA+GGG | + | chr4_3:69051072-69051091 | None:intergenic | 40.0% | |
| CCTTGACAGATTGTATGCAT+GGG | - | chr4_3:69051070-69051089 | Msa0658880:intron | 40.0% | |
| AGTCATTCTGTGACACCTAT+TGG | - | chr4_3:69051375-69051394 | Msa0658880:CDS | 40.0% | |
| GTCATTCTGTGACACCTATT+GGG | - | chr4_3:69051376-69051395 | Msa0658880:CDS | 40.0% | |
| !! | GCAACTTCTGGAATTAACAG+AGG | - | chr4_3:69051613-69051632 | Msa0658880:CDS | 40.0% |
| GATTTAACGCTCGATTGACA+AGG | + | chr4_3:69051720-69051739 | None:intergenic | 40.0% | |
| GATTTAACGCTCGATTGACA+AGG | + | chr4_3:69051720-69051739 | None:intergenic | 40.0% | |
| GCAATACATCACCATTTCCT+TGG | - | chr4_3:69051863-69051882 | Msa0658880:CDS | 40.0% | |
| CACGCAGAGAAATAATGACT+CGG | - | chr4_3:69051928-69051947 | Msa0658880:CDS | 40.0% | |
| ! | TTGGTCTGAGTTTTGCAAAC+TGG | - | chr4_3:69051973-69051992 | Msa0658880:CDS | 40.0% |
| ATTGAGAGCTTCCACATATG+AGG | + | chr4_3:69052012-69052031 | None:intergenic | 40.0% | |
| TCATATGTGGAAGCTCTCAA+TGG | - | chr4_3:69052011-69052030 | Msa0658880:CDS | 40.0% | |
| CGGCATAGAACAAAAATAGG+TGG | + | chr4_3:69052116-69052135 | None:intergenic | 40.0% | |
| GCATCACTAAGTTCTTCAGA+GGG | + | chr4_3:69052167-69052186 | None:intergenic | 40.0% | |
| TGCATCACTAAGTTCTTCAG+AGG | + | chr4_3:69052168-69052187 | None:intergenic | 40.0% | |
| AAAACTAATGAAGACAGCGG+AGG | - | chr4_3:69052293-69052312 | Msa0658880:CDS | 40.0% | |
| CAACGATGCTTCGGAAAATT+TGG | + | chr4_3:69052378-69052397 | None:intergenic | 40.0% | |
| AGGTGGAGGAGAAAACACAT+TGG | + | chr4_3:69048643-69048662 | None:intergenic | 45.0% | |
| CAAGATGCACCTAAATCAGG+TGG | + | chr4_3:69048666-69048685 | None:intergenic | 45.0% | |
| CACCTGATTTAGGTGCATCT+TGG | - | chr4_3:69048664-69048683 | Msa0658880:CDS | 45.0% | |
| TCCCAAGATGCACCTAAATC+AGG | + | chr4_3:69048669-69048688 | None:intergenic | 45.0% | |
| TCTTGGGATTTCTTTGACCC+TGG | - | chr4_3:69048681-69048700 | Msa0658880:CDS | 45.0% | |
| AACTCTCACTATCCTCTCCA+GGG | + | chr4_3:69048701-69048720 | None:intergenic | 45.0% | |
| AAACTCTCACTATCCTCTCC+AGG | + | chr4_3:69048702-69048721 | None:intergenic | 45.0% | |
| TCAAAGATTGCAGGGATCAG+TGG | - | chr4_3:69048754-69048773 | Msa0658880:CDS | 45.0% | |
| AGGGATCAGTGGTTACAAAC+TGG | - | chr4_3:69048765-69048784 | Msa0658880:CDS | 45.0% | |
| TGGAAATGTGAGACAGTTGG+AGG | - | chr4_3:69048845-69048864 | Msa0658880:CDS | 45.0% | |
| !! | GCTGAAAAGGGTGTTGATGT+TGG | - | chr4_3:69048909-69048928 | Msa0658880:intron | 45.0% |
| CTGTGAGTGATGAACTCTGA+AGG | + | chr4_3:69049005-69049024 | None:intergenic | 45.0% | |
| GCATAGGTTCATTCGAGCTT+CGG | - | chr4_3:69049061-69049080 | Msa0658880:intron | 45.0% | |
| TTCATTCGAGCTTCGGAATC+TGG | - | chr4_3:69049068-69049087 | Msa0658880:intron | 45.0% | |
| AGTCTTTCTGCGGCAACAAA+CGG | + | chr4_3:69049328-69049347 | None:intergenic | 45.0% | |
| CATGTGCCTGTTCTATTGCT+AGG | + | chr4_3:69049809-69049828 | None:intergenic | 45.0% | |
| ! | TGGCCGCTATTGACTACTAT+GGG | + | chr4_3:69049901-69049920 | None:intergenic | 45.0% |
| ! | TTGGCCGCTATTGACTACTA+TGG | + | chr4_3:69049902-69049921 | None:intergenic | 45.0% |
| ATAGCGTTGCAGTGAGATAG+CGG | - | chr4_3:69049976-69049995 | Msa0658880:intron | 45.0% | |
| ACAGAACAGCAGAAAAGCAG+AGG | + | chr4_3:69050109-69050128 | None:intergenic | 45.0% | |
| AGAGAGAGCAGAATGGAGTT+TGG | + | chr4_3:69050272-69050291 | None:intergenic | 45.0% | |
| CAGAAACAGAGAGAGCAGAA+TGG | + | chr4_3:69050279-69050298 | None:intergenic | 45.0% | |
| GACCCCAAAAATGCTATAGC+GGG | + | chr4_3:69050436-69050455 | None:intergenic | 45.0% | |
| GTTGCAAGCTGAGAACAGAT+AGG | - | chr4_3:69050707-69050726 | Msa0658880:intron | 45.0% | |
| GTTCTGCTTCAGCTCAGATT+GGG | + | chr4_3:69050741-69050760 | None:intergenic | 45.0% | |
| AGTTCTGCTTCAGCTCAGAT+TGG | + | chr4_3:69050742-69050761 | None:intergenic | 45.0% | |
| !!! | TTTTGAAGCCAAAGGGATCC+TGG | + | chr4_3:69050973-69050992 | None:intergenic | 45.0% |
| GAAGAGTTCTGCATGATTGC+TGG | - | chr4_3:69051032-69051051 | Msa0658880:intron | 45.0% | |
| TGCATACAATCTGTCAAGGG+TGG | + | chr4_3:69051069-69051088 | None:intergenic | 45.0% | |
| CCCTTGACAGATTGTATGCA+TGG | - | chr4_3:69051069-69051088 | Msa0658880:intron | 45.0% | |
| CCCATGCATACAATCTGTCA+AGG | + | chr4_3:69051073-69051092 | None:intergenic | 45.0% | |
| CTGCATACAGATAGCCCAAT+AGG | + | chr4_3:69051393-69051412 | None:intergenic | 45.0% | |
| CTATTGGGCTATCTGTATGC+AGG | - | chr4_3:69051391-69051410 | Msa0658880:CDS | 45.0% | |
| TCGATCATAGACCTTCCTGA+TGG | + | chr4_3:69051426-69051445 | None:intergenic | 45.0% | |
| TCAAGTGATCGACAAGACCA+GGG | - | chr4_3:69051490-69051509 | Msa0658880:intron | 45.0% | |
| AGAGTTGTATCCGCAACTTC+TGG | - | chr4_3:69051601-69051620 | Msa0658880:CDS | 45.0% | |
| GATTTATGGCTGGTGCAGAT+TGG | - | chr4_3:69051803-69051822 | Msa0658880:CDS | 45.0% | |
| TAACAGCCACACCTCATATG+TGG | - | chr4_3:69051998-69052017 | Msa0658880:CDS | 45.0% | |
| ATGTGGAAGCTCTCAATGGT+TGG | - | chr4_3:69052015-69052034 | Msa0658880:CDS | 45.0% | |
| ! | TTTTACCAAGGGAACGTACC+AGG | - | chr4_3:69052054-69052073 | Msa0658880:CDS | 45.0% |
| GTCGGATCTTCACAATCTGA+TGG | - | chr4_3:69052202-69052221 | Msa0658880:CDS | 45.0% | |
| GGCAAAAAAGTGAAGTGGCT+CGG | - | chr4_3:69052417-69052436 | Msa0658880:CDS | 45.0% | |
| GATGCACCTAAATCAGGTGG+AGG | + | chr4_3:69048663-69048682 | None:intergenic | 50.0% | |
| GGATTTCTTTGACCCTGGAG+AGG | - | chr4_3:69048686-69048705 | Msa0658880:CDS | 50.0% | |
| GAAGGAGGAGGAGAAGAACA+TGG | - | chr4_3:69048947-69048966 | Msa0658880:intron | 50.0% | |
| GTCTTTCTGCGGCAACAAAC+GGG | + | chr4_3:69049327-69049346 | None:intergenic | 50.0% | |
| TAGAACAGGCACATGCCACA+AGG | - | chr4_3:69049814-69049833 | Msa0658880:intron | 50.0% | |
| GCTATCTCACTGCAACGCTA+TGG | + | chr4_3:69049977-69049996 | None:intergenic | 50.0% | |
| GAGCAAACGCGACAAAGTAG+AGG | + | chr4_3:69050161-69050180 | None:intergenic | 50.0% | |
| !! | CTGTGCTGACTCAGCACAAT+TGG | - | chr4_3:69050760-69050779 | Msa0658880:intron | 50.0% |
| ! | CTTTTCGATCATCCTCGTCC+AGG | - | chr4_3:69050952-69050971 | Msa0658880:intron | 50.0% |
| ATCTGTCAAGGGTGGACGAA+TGG | + | chr4_3:69051061-69051080 | None:intergenic | 50.0% | |
| TGCAGGCTAGTGAATCCATC+AGG | - | chr4_3:69051408-69051427 | Msa0658880:intron | 50.0% | |
| GGCTAGTGAATCCATCAGGA+AGG | - | chr4_3:69051412-69051431 | Msa0658880:intron | 50.0% | |
| TGTCGATCACTTGAGTGCCT+TGG | + | chr4_3:69051484-69051503 | None:intergenic | 50.0% | |
| CTCAAGTGATCGACAAGACC+AGG | - | chr4_3:69051489-69051508 | Msa0658880:intron | 50.0% | |
| TCTGCACTCGCGAATTAGAG+TGG | - | chr4_3:69051526-69051545 | Msa0658880:intron | 50.0% | |
| ! | CAGATTGGTCAGGATGTGGA+AGG | - | chr4_3:69051818-69051837 | Msa0658880:CDS | 50.0% |
| AACTCAACAGGAACCTTGCC+AGG | - | chr4_3:69051900-69051919 | Msa0658880:CDS | 50.0% | |
| ATTTCTCTGCGTGCATCTCC+TGG | + | chr4_3:69051921-69051940 | None:intergenic | 50.0% | |
| GAGCTTCCACATATGAGGTG+TGG | + | chr4_3:69052007-69052026 | None:intergenic | 50.0% | |
| TATGCCGTGATTGGTGTGCT+GGG | - | chr4_3:69052129-69052148 | Msa0658880:CDS | 50.0% | |
| GTTCTTCAGAGGGTAAAGCC+TGG | + | chr4_3:69052157-69052176 | None:intergenic | 50.0% | |
| GGTCAGTCGATCAAGAACCT+TGG | + | chr4_3:69052357-69052376 | None:intergenic | 50.0% | |
| CCTAAATCAGGTGGAGGTGG+AGG | + | chr4_3:69048657-69048676 | None:intergenic | 55.0% | |
| CCTCCACCTCCACCTGATTT+AGG | - | chr4_3:69048654-69048673 | Msa0658880:CDS | 55.0% | |
| GCACCTAAATCAGGTGGAGG+TGG | + | chr4_3:69048660-69048679 | None:intergenic | 55.0% | |
| TCACCACCAACAGTACCACC+TGG | + | chr4_3:69048873-69048892 | None:intergenic | 55.0% | |
| ! | AACGCGTCGTAGCGGTTTTG+CGG | - | chr4_3:69050002-69050021 | Msa0658880:intron | 55.0% |
| ATCCTCGTCCAGGATCCCTT+TGG | - | chr4_3:69050962-69050981 | Msa0658880:intron | 55.0% | |
| CAAGACCAGGGCAGTTGTGA+AGG | - | chr4_3:69051502-69051521 | Msa0658880:intron | 55.0% | |
| CAGATCCTTCACAACTGCCC+TGG | + | chr4_3:69051510-69051529 | None:intergenic | 55.0% | |
| ! | ATGGCTGGTGCAGATTGGTC+AGG | - | chr4_3:69051808-69051827 | Msa0658880:CDS | 55.0% |
| ! | GGTGCAGATTGGTCAGGATG+TGG | - | chr4_3:69051814-69051833 | Msa0658880:CDS | 55.0% |
| TTGCTCCTGGTACGTTCCCT+TGG | + | chr4_3:69052062-69052081 | None:intergenic | 55.0% | |
| ! | GGAGAACGGTCTTTTGCTCC+TGG | + | chr4_3:69052075-69052094 | None:intergenic | 55.0% |
| CTATGCCGTGATTGGTGTGC+TGG | - | chr4_3:69052128-69052147 | Msa0658880:CDS | 55.0% | |
| GGATCCCAGCACACCAATCA+CGG | + | chr4_3:69052136-69052155 | None:intergenic | 55.0% | |
| TGATTGGTGTGCTGGGATCC+AGG | - | chr4_3:69052136-69052155 | Msa0658880:CDS | 55.0% | |
| !! | GTGAGACAGTTGGAGGCACC+AGG | - | chr4_3:69048852-69048871 | Msa0658880:CDS | 60.0% |
| !! | AGACAGTTGGAGGCACCAGG+TGG | - | chr4_3:69048855-69048874 | Msa0658880:CDS | 60.0% |
| ! | GAGGCACCAGGTGGTACTGT+TGG | - | chr4_3:69048864-69048883 | Msa0658880:CDS | 60.0% |
| GCACCAGGTGGTACTGTTGG+TGG | - | chr4_3:69048867-69048886 | Msa0658880:intron | 60.0% | |
| !! | GCGGCAACAAACGGGCTGAA+TGG | + | chr4_3:69049319-69049338 | None:intergenic | 60.0% |
| GGCCAATAGCGCCGCTATAG+CGG | - | chr4_3:69049916-69049935 | Msa0658880:intron | 60.0% | |
| !! | TGGCTTGTTGCGTAGCGCTC+CGG | + | chr4_3:69049957-69049976 | None:intergenic | 60.0% |
| AGCCAAAGGGATCCTGGACG+AGG | + | chr4_3:69050967-69050986 | None:intergenic | 60.0% | |
| TCTGCGTGCATCTCCTGGCA+AGG | + | chr4_3:69051916-69051935 | None:intergenic | 60.0% | |
| AGAGCTCGACGAGGGGAGAA+CGG | + | chr4_3:69052089-69052108 | None:intergenic | 60.0% | |
| GGCCGCTATAGCGGCGCTAT+TGG | + | chr4_3:69049921-69049940 | None:intergenic | 65.0% | |
| ! | TAGCGGATAGCGGCGCGTAG+CGG | + | chr4_3:69050461-69050480 | None:intergenic | 65.0% |
| GTTCTCCCCTCGTCGAGCTC+TGG | - | chr4_3:69052088-69052107 | Msa0658880:CDS | 65.0% | |
| TGGAGCCAGAGCTCGACGAG+GGG | + | chr4_3:69052096-69052115 | None:intergenic | 65.0% | |
| GTGGAGCCAGAGCTCGACGA+GGG | + | chr4_3:69052097-69052116 | None:intergenic | 65.0% | |
| AGCGGCGCAACGCGTCGTAG+CGG | - | chr4_3:69049994-69050013 | Msa0658880:intron | 70.0% | |
| GGTGGAGCCAGAGCTCGACG+AGG | + | chr4_3:69052098-69052117 | None:intergenic | 70.0% | |
| GCACCGCGCGGCCGCTATAG+CGG | + | chr4_3:69049930-69049949 | None:intergenic | 75.0% | |
| GCTATAGCGGCCGCGCGGTG+CGG | - | chr4_3:69049929-69049948 | Msa0658880:intron | 75.0% | |
| ! | GCGCCGCTATAGCGGCCGCG+CGG | - | chr4_3:69049924-69049943 | Msa0658880:intron | 80.0% |
| ! | CGCTCCGGCACCGCACCGCG+CGG | + | chr4_3:69049942-69049961 | None:intergenic | 85.0% |
| ! | GCGGCCGCGCGGTGCGGTGC+CGG | - | chr4_3:69049935-69049954 | Msa0658880:intron | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 69048222 | 69052484 | 69048222 | ID=Msa0658880;Name=Msa0658880 |
| chr4_3 | mRNA | 69048222 | 69052484 | 69048222 | ID=Msa0658880-mRNA-1;Parent=Msa0658880;Name=Msa0658880-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0.6|1|1|1|5|0|700 |
| chr4_3 | exon | 69051554 | 69052484 | 69051554 | ID=Msa0658880-mRNA-1:exon:20194;Parent=Msa0658880-mRNA-1 |
| chr4_3 | exon | 69051343 | 69051420 | 69051343 | ID=Msa0658880-mRNA-1:exon:20193;Parent=Msa0658880-mRNA-1 |
| chr4_3 | exon | 69049588 | 69049793 | 69049588 | ID=Msa0658880-mRNA-1:exon:20192;Parent=Msa0658880-mRNA-1 |
| chr4_3 | exon | 69049070 | 69049293 | 69049070 | ID=Msa0658880-mRNA-1:exon:20191;Parent=Msa0658880-mRNA-1 |
| chr4_3 | exon | 69048222 | 69048885 | 69048222 | ID=Msa0658880-mRNA-1:exon:20190;Parent=Msa0658880-mRNA-1 |
| chr4_3 | CDS | 69051554 | 69052484 | 69051554 | ID=Msa0658880-mRNA-1:cds;Parent=Msa0658880-mRNA-1 |
| chr4_3 | CDS | 69051343 | 69051420 | 69051343 | ID=Msa0658880-mRNA-1:cds;Parent=Msa0658880-mRNA-1 |
| chr4_3 | CDS | 69049588 | 69049793 | 69049588 | ID=Msa0658880-mRNA-1:cds;Parent=Msa0658880-mRNA-1 |
| chr4_3 | CDS | 69049070 | 69049293 | 69049070 | ID=Msa0658880-mRNA-1:cds;Parent=Msa0658880-mRNA-1 |
| chr4_3 | CDS | 69048222 | 69048885 | 69048222 | ID=Msa0658880-mRNA-1:cds;Parent=Msa0658880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
