Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704410 | XP_003630050.1 | 95.887 | 705 | 18 | 6 | 1 | 700 | 1 | 699 | 0.0 | 1373 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704410 | sp|A0A178VBJ0|APSR1_ARATH | 30.220 | 364 | 220 | 8 | 265 | 627 | 195 | 525 | 3.61e-41 | 163 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704410 | G7LAC7 | 95.887 | 705 | 18 | 6 | 1 | 700 | 1 | 699 | 0.0 | 1373 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0704410 | 0.803933 | 2.751895e-49 | -8.615850e-47 |
| Msa0001940 | Msa0704410 | 0.820457 | 6.788968e-53 | -8.615850e-47 |
| Msa0002580 | Msa0704410 | 0.817742 | 2.816902e-52 | -8.615850e-47 |
| Msa0005890 | Msa0704410 | 0.832386 | 9.739590e-56 | -8.615850e-47 |
| Msa0017670 | Msa0704410 | 0.817200 | 3.731150e-52 | -8.615850e-47 |
| Msa0017950 | Msa0704410 | 0.823930 | 1.062321e-53 | -8.615850e-47 |
| Msa0018160 | Msa0704410 | 0.822483 | 2.312840e-53 | -8.615850e-47 |
| Msa0028420 | Msa0704410 | 0.817143 | 3.842712e-52 | -8.615850e-47 |
| Msa0035060 | Msa0704410 | 0.811149 | 8.086590e-51 | -8.615850e-47 |
| Msa0035140 | Msa0704410 | 0.814491 | 1.499784e-51 | -8.615850e-47 |
| Msa0036870 | Msa0704410 | 0.818302 | 2.103843e-52 | -8.615850e-47 |
| Msa0042610 | Msa0704410 | 0.839456 | 1.567988e-57 | -8.615850e-47 |
| Msa0052260 | Msa0704410 | 0.806364 | 8.525154e-50 | -8.615850e-47 |
| Msa0052480 | Msa0704410 | 0.802159 | 6.403359e-49 | -8.615850e-47 |
| Msa0054690 | Msa0704410 | 0.813970 | 1.954862e-51 | -8.615850e-47 |
| Msa0081980 | Msa0704410 | 0.810908 | 9.121661e-51 | -8.615850e-47 |
| Msa0090400 | Msa0704410 | 0.828305 | 9.679867e-55 | -8.615850e-47 |
| Msa0092790 | Msa0704410 | 0.803252 | 3.808585e-49 | -8.615850e-47 |
| Msa0097260 | Msa0704410 | 0.812821 | 3.494913e-51 | -8.615850e-47 |
| Msa0098040 | Msa0704410 | 0.822847 | 1.902982e-53 | -8.615850e-47 |
| Msa0117480 | Msa0704410 | 0.843196 | 1.625593e-58 | -8.615850e-47 |
| Msa0624900 | Msa0704410 | 0.808999 | 2.349622e-50 | -8.615850e-47 |
| Msa0658880 | Msa0704410 | 0.947155 | 1.164441e-105 | -8.615850e-47 |
| Msa0661150 | Msa0704410 | 0.804687 | 1.916233e-49 | -8.615850e-47 |
| Msa0666700 | Msa0704410 | 0.808077 | 3.697687e-50 | -8.615850e-47 |
| Msa0670100 | Msa0704410 | 0.851701 | 7.475146e-61 | -8.615850e-47 |
| Msa0698830 | Msa0704410 | 0.801535 | 8.600861e-49 | -8.615850e-47 |
| Msa0704380 | Msa0704410 | 0.949066 | 2.694487e-107 | -8.615850e-47 |
| Msa0704410 | Msa0741220 | 0.811179 | 7.966956e-51 | -8.615850e-47 |
| Msa0704410 | Msa0756490 | 0.802287 | 6.025510e-49 | -8.615850e-47 |
| Msa0704410 | Msa0761670 | 0.808609 | 2.847666e-50 | -8.615850e-47 |
| Msa0704410 | Msa0792370 | 0.808407 | 3.144572e-50 | -8.615850e-47 |
| Msa0704410 | Msa0795870 | 0.836467 | 9.201231e-57 | -8.615850e-47 |
| Msa0704410 | Msa0828970 | 0.808839 | 2.542144e-50 | -8.615850e-47 |
| Msa0704410 | Msa0829300 | 0.831351 | 1.753602e-55 | -8.615850e-47 |
| Msa0704410 | Msa0829330 | 0.830141 | 3.470913e-55 | -8.615850e-47 |
| Msa0704410 | Msa0833650 | 0.841311 | 5.130768e-58 | -8.615850e-47 |
| Msa0704410 | Msa0945110 | 0.826295 | 2.934373e-54 | -8.615850e-47 |
| Msa0704410 | Msa0967380 | 0.801764 | 7.718284e-49 | -8.615850e-47 |
| Msa0704410 | Msa0967870 | 0.809927 | 1.485572e-50 | -8.615850e-47 |
| Msa0704410 | Msa1019470 | 0.807117 | 5.912511e-50 | -8.615850e-47 |
| Msa0704410 | Msa1028100 | 0.809202 | 2.126111e-50 | -8.615850e-47 |
| Msa0704410 | Msa1034600 | 0.804879 | 1.747680e-49 | -8.615850e-47 |
| Msa0704410 | Msa1042160 | 0.808086 | 3.680359e-50 | -8.615850e-47 |
| Msa0704410 | Msa1042190 | 0.810597 | 1.064957e-50 | -8.615850e-47 |
| Msa0704410 | Msa1044680 | 0.813624 | 2.328978e-51 | -8.615850e-47 |
| Msa0704410 | Msa1074370 | 0.817261 | 3.614226e-52 | -8.615850e-47 |
| Msa0704410 | Msa1078170 | 0.809039 | 2.303799e-50 | -8.615850e-47 |
| Msa0704410 | Msa1090140 | 0.802710 | 4.930348e-49 | -8.615850e-47 |
| Msa0704410 | Msa1103990 | 0.842867 | 1.989693e-58 | -8.615850e-47 |
| Msa0704410 | Msa1132840 | 0.839501 | 1.526085e-57 | -8.615850e-47 |
| Msa0704410 | Msa1142020 | 0.801761 | 7.728835e-49 | -8.615850e-47 |
| Msa0704410 | Msa1155170 | -0.819023 | 1.443829e-52 | -8.615850e-47 |
| Msa0704410 | Msa1177320 | 0.819527 | 1.108261e-52 | -8.615850e-47 |
| Msa0704410 | Msa1186020 | 0.802782 | 4.763478e-49 | -8.615850e-47 |
| Msa0704410 | Msa1190920 | 0.810883 | 9.237410e-51 | -8.615850e-47 |
| Msa0704410 | Msa1200890 | 0.805084 | 1.583352e-49 | -8.615850e-47 |
| Msa0704410 | Msa1206460 | 0.800092 | 1.695270e-48 | -8.615850e-47 |
| Msa0704410 | Msa1208950 | 0.813626 | 2.327096e-51 | -8.615850e-47 |
| Msa0704410 | Msa1225860 | -0.807784 | 4.268648e-50 | -8.615850e-47 |
| Msa0704410 | Msa1265650 | 0.817105 | 3.917664e-52 | -8.615850e-47 |
| Msa0704410 | Msa1293870 | 0.819469 | 1.142456e-52 | -8.615850e-47 |
| Msa0704410 | Msa1297230 | 0.818063 | 2.383461e-52 | -8.615850e-47 |
| Msa0704410 | Msa1298220 | 0.812450 | 4.214102e-51 | -8.615850e-47 |
| Msa0704410 | Msa1303560 | 0.819553 | 1.093580e-52 | -8.615850e-47 |
| Msa0704410 | Msa1303650 | 0.822832 | 1.918272e-53 | -8.615850e-47 |
| Msa0704410 | Msa1306910 | 0.817840 | 2.675848e-52 | -8.615850e-47 |
| Msa0704410 | Msa1307630 | 0.813348 | 2.679097e-51 | -8.615850e-47 |
| Msa0704410 | Msa1321340 | 0.839929 | 1.180781e-57 | -8.615850e-47 |
| Msa0704410 | Msa1343180 | 0.808188 | 3.500924e-50 | -8.615850e-47 |
| Msa0704410 | Msa1343430 | 0.812458 | 4.196171e-51 | -8.615850e-47 |
| Msa0704410 | Msa1351780 | 0.808856 | 2.521300e-50 | -8.615850e-47 |
| Msa0704410 | Msa1372040 | 0.811603 | 6.445718e-51 | -8.615850e-47 |
| Msa0704410 | Msa1372230 | 0.802343 | 5.868759e-49 | -8.615850e-47 |
| Msa0704410 | Msa1373100 | 0.814398 | 1.572228e-51 | -8.615850e-47 |
| Msa0704410 | Msa1390440 | 0.804252 | 2.361988e-49 | -8.615850e-47 |
| Msa0704410 | Msa1391770 | 0.809659 | 1.696471e-50 | -8.615850e-47 |
| Msa0704410 | Msa1393280 | 0.830870 | 2.302279e-55 | -8.615850e-47 |
| Msa0704410 | Msa1421570 | 0.800268 | 1.560923e-48 | -8.615850e-47 |
| Msa0704410 | Msa1422950 | 0.814403 | 1.568149e-51 | -8.615850e-47 |
| Msa0704410 | Msa1440880 | 0.828240 | 1.003467e-54 | -8.615850e-47 |
| Msa0704410 | Msa1446810 | 0.803921 | 2.768074e-49 | -8.615850e-47 |
| Msa0704410 | Msa1446820 | 0.800599 | 1.336468e-48 | -8.615850e-47 |
| Msa0704410 | Msa1451160 | 0.814167 | 1.767974e-51 | -8.615850e-47 |
| Msa0704410 | Msa1454140 | 0.804736 | 1.871745e-49 | -8.615850e-47 |
| Msa0704410 | Msa1465440 | 0.811961 | 5.387640e-51 | -8.615850e-47 |
| Msa0704410 | Msa1466920 | 0.810558 | 1.086027e-50 | -8.615850e-47 |
| Msa0124060 | Msa0704410 | 0.810609 | 1.058573e-50 | -8.615850e-47 |
| Msa0125550 | Msa0704410 | 0.803812 | 2.915103e-49 | -8.615850e-47 |
| Msa0137880 | Msa0704410 | 0.835632 | 1.498362e-56 | -8.615850e-47 |
| Msa0140280 | Msa0704410 | 0.804339 | 2.264723e-49 | -8.615850e-47 |
| Msa0168500 | Msa0704410 | 0.807349 | 5.280139e-50 | -8.615850e-47 |
| Msa0173690 | Msa0704410 | 0.819701 | 1.011396e-52 | -8.615850e-47 |
| Msa0174290 | Msa0704410 | 0.805553 | 1.262915e-49 | -8.615850e-47 |
| Msa0175750 | Msa0704410 | 0.802957 | 4.384998e-49 | -8.615850e-47 |
| Msa0182240 | Msa0704410 | 0.801336 | 9.448242e-49 | -8.615850e-47 |
| Msa0221000 | Msa0704410 | 0.801238 | 9.893055e-49 | -8.615850e-47 |
| Msa0223080 | Msa0704410 | 0.808085 | 3.682435e-50 | -8.615850e-47 |
| Msa0225100 | Msa0704410 | 0.818192 | 2.228551e-52 | -8.615850e-47 |
| Msa0225860 | Msa0704410 | 0.825017 | 5.894835e-54 | -8.615850e-47 |
| Msa0229230 | Msa0704410 | 0.829418 | 5.205874e-55 | -8.615850e-47 |
| Msa0230800 | Msa0704410 | 0.802203 | 6.269971e-49 | -8.615850e-47 |
| Msa0378720 | Msa0704410 | 0.810593 | 1.067163e-50 | -8.615850e-47 |
| Msa0380670 | Msa0704410 | 0.801116 | 1.047769e-48 | -8.615850e-47 |
| Msa0389950 | Msa0704410 | 0.816850 | 4.471141e-52 | -8.615850e-47 |
| Msa0428920 | Msa0704410 | 0.800237 | 1.583886e-48 | -8.615850e-47 |
| Msa0430300 | Msa0704410 | 0.831418 | 1.687843e-55 | -8.615850e-47 |
| Msa0436910 | Msa0704410 | 0.819520 | 1.112535e-52 | -8.615850e-47 |
| Msa0472950 | Msa0704410 | 0.800319 | 1.524161e-48 | -8.615850e-47 |
| Msa0474730 | Msa0704410 | 0.817887 | 2.612232e-52 | -8.615850e-47 |
| Msa0476650 | Msa0704410 | 0.808279 | 3.348123e-50 | -8.615850e-47 |
| Msa0244640 | Msa0704410 | 0.806345 | 8.607106e-50 | -8.615850e-47 |
| Msa0266180 | Msa0704410 | 0.812765 | 3.595521e-51 | -8.615850e-47 |
| Msa0267110 | Msa0704410 | 0.827200 | 1.784432e-54 | -8.615850e-47 |
| Msa0287740 | Msa0704410 | 0.829044 | 6.415969e-55 | -8.615850e-47 |
| Msa0298470 | Msa0704410 | 0.850507 | 1.623927e-60 | -8.615850e-47 |
| Msa0300270 | Msa0704410 | 0.806016 | 1.009492e-49 | -8.615850e-47 |
| Msa0302160 | Msa0704410 | 0.805588 | 1.241548e-49 | -8.615850e-47 |
| Msa0307670 | Msa0704410 | 0.806410 | 8.337703e-50 | -8.615850e-47 |
| Msa0321620 | Msa0704410 | 0.815791 | 7.713851e-52 | -8.615850e-47 |
| Msa0337700 | Msa0704410 | 0.822120 | 2.807355e-53 | -8.615850e-47 |
| Msa0339490 | Msa0704410 | 0.806767 | 7.011515e-50 | -8.615850e-47 |
| Msa0339500 | Msa0704410 | 0.803963 | 2.712628e-49 | -8.615850e-47 |
| Msa0340500 | Msa0704410 | 0.824924 | 6.199750e-54 | -8.615850e-47 |
| Msa0530780 | Msa0704410 | 0.847356 | 1.217922e-59 | -8.615850e-47 |
| Msa0534720 | Msa0704410 | 0.801760 | 7.735176e-49 | -8.615850e-47 |
| Msa0580370 | Msa0704410 | 0.842172 | 3.042236e-58 | -8.615850e-47 |
| Msa0581470 | Msa0704410 | 0.819428 | 1.167262e-52 | -8.615850e-47 |
| Msa0583360 | Msa0704410 | -0.800151 | 1.648842e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704410 | MtrunA17_Chr8g0382551 | 94.369 | 444 | 15 | 5 | 1 | 440 | 1 | 438 | 0.0 | 823 |
| Msa0704410 | MtrunA17_Chr8g0382541 | 98.312 | 237 | 3 | 1 | 465 | 700 | 1 | 237 | 3.53e-171 | 489 |
| Msa0704410 | MtrunA17_Chr5g0440551 | 35.742 | 775 | 374 | 22 | 1 | 690 | 1 | 736 | 5.50e-121 | 379 |
| Msa0704410 | MtrunA17_Chr3g0118401 | 40.173 | 463 | 245 | 10 | 250 | 690 | 308 | 760 | 7.86e-96 | 313 |
| Msa0704410 | MtrunA17_Chr3g0118401 | 45.570 | 79 | 42 | 1 | 1 | 78 | 1 | 79 | 2.29e-14 | 77.0 |
| Msa0704410 | MtrunA17_Chr1g0211271 | 34.390 | 410 | 227 | 7 | 233 | 631 | 242 | 620 | 1.63e-61 | 219 |
| Msa0704410 | MtrunA17_Chr4g0072011 | 34.211 | 456 | 248 | 12 | 247 | 686 | 310 | 729 | 5.27e-60 | 215 |
| Msa0704410 | MtrunA17_Chr4g0072011 | 36.290 | 124 | 73 | 2 | 1 | 124 | 1 | 118 | 2.87e-11 | 67.0 |
| Msa0704410 | MtrunA17_Chr2g0298171 | 39.088 | 307 | 150 | 7 | 264 | 557 | 526 | 808 | 2.23e-49 | 186 |
| Msa0704410 | MtrunA17_Chr3g0143731 | 24.206 | 756 | 424 | 22 | 1 | 681 | 1 | 682 | 4.98e-48 | 180 |
| Msa0704410 | MtrunA17_Chr3g0124841 | 31.856 | 361 | 221 | 4 | 267 | 624 | 451 | 789 | 5.36e-48 | 182 |
| Msa0704410 | MtrunA17_Chr3g0124841 | 45.161 | 62 | 34 | 0 | 1 | 62 | 1 | 62 | 2.23e-11 | 67.4 |
| Msa0704410 | MtrunA17_Chr5g0448571 | 29.680 | 438 | 235 | 8 | 273 | 675 | 357 | 756 | 5.50e-48 | 181 |
| Msa0704410 | MtrunA17_Chr1g0208081 | 90.588 | 85 | 8 | 0 | 381 | 465 | 1 | 85 | 1.42e-45 | 158 |
| Msa0704410 | MtrunA17_Chr5g0405741 | 29.891 | 368 | 223 | 7 | 265 | 630 | 199 | 533 | 1.24e-41 | 161 |
| Msa0704410 | MtrunA17_Chr2g0331821 | 29.444 | 360 | 210 | 8 | 271 | 625 | 321 | 641 | 6.07e-39 | 154 |
| Msa0704410 | MtrunA17_Chr1g0208071 | 91.667 | 72 | 4 | 1 | 270 | 341 | 8 | 77 | 1.88e-37 | 134 |
| Msa0704410 | MtrunA17_Chr3g0130761 | 29.138 | 429 | 252 | 12 | 197 | 624 | 288 | 665 | 3.89e-36 | 145 |
| Msa0704410 | MtrunA17_Chr8g0335341 | 26.170 | 684 | 374 | 27 | 1 | 630 | 1 | 607 | 2.34e-32 | 133 |
| Msa0704410 | MtrunA17_Chr4g0004471 | 24.860 | 358 | 223 | 7 | 271 | 625 | 124 | 438 | 1.12e-28 | 121 |
| Msa0704410 | MtrunA17_Chr2g0303521 | 32.389 | 247 | 149 | 7 | 384 | 624 | 293 | 527 | 1.03e-25 | 112 |
| Msa0704410 | MtrunA17_Chr7g0250681 | 29.577 | 284 | 174 | 8 | 355 | 631 | 465 | 729 | 1.53e-25 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704410 | AT4G39790.1 | 52.793 | 716 | 245 | 20 | 1 | 691 | 9 | 656 | 0.0 | 637 |
| Msa0704410 | AT2G27090.2 | 41.995 | 431 | 233 | 6 | 270 | 689 | 307 | 731 | 1.77e-100 | 325 |
| Msa0704410 | AT2G27090.2 | 55.263 | 76 | 33 | 1 | 1 | 75 | 1 | 76 | 5.23e-17 | 85.9 |
| Msa0704410 | AT2G27090.1 | 41.995 | 431 | 233 | 6 | 270 | 689 | 307 | 731 | 1.77e-100 | 325 |
| Msa0704410 | AT2G27090.1 | 55.263 | 76 | 33 | 1 | 1 | 75 | 1 | 76 | 5.23e-17 | 85.9 |
| Msa0704410 | AT1G21740.1 | 37.057 | 367 | 194 | 9 | 262 | 620 | 489 | 826 | 2.19e-59 | 216 |
| Msa0704410 | AT1G77500.1 | 34.398 | 407 | 216 | 8 | 237 | 620 | 400 | 778 | 8.62e-59 | 214 |
| Msa0704410 | AT4G30130.3 | 28.489 | 695 | 368 | 19 | 1 | 620 | 1 | 641 | 9.40e-59 | 211 |
| Msa0704410 | AT4G30130.1 | 28.489 | 695 | 368 | 19 | 1 | 620 | 1 | 641 | 9.40e-59 | 211 |
| Msa0704410 | AT4G35240.4 | 30.474 | 443 | 234 | 10 | 277 | 682 | 426 | 831 | 1.70e-52 | 195 |
| Msa0704410 | AT4G35240.3 | 30.474 | 443 | 234 | 10 | 277 | 682 | 426 | 831 | 1.70e-52 | 195 |
| Msa0704410 | AT4G35240.2 | 30.474 | 443 | 234 | 10 | 277 | 682 | 426 | 831 | 1.98e-52 | 195 |
| Msa0704410 | AT4G35240.1 | 30.474 | 443 | 234 | 10 | 277 | 682 | 426 | 831 | 1.98e-52 | 195 |
| Msa0704410 | AT2G17110.1 | 31.674 | 442 | 230 | 9 | 277 | 683 | 316 | 720 | 2.26e-51 | 191 |
| Msa0704410 | AT2G19090.1 | 31.532 | 444 | 236 | 10 | 202 | 617 | 318 | 721 | 6.16e-44 | 170 |
| Msa0704410 | AT1G52320.3 | 31.111 | 360 | 202 | 10 | 266 | 621 | 23 | 340 | 2.63e-42 | 160 |
| Msa0704410 | AT1G52320.4 | 31.111 | 360 | 202 | 10 | 266 | 621 | 23 | 340 | 2.63e-42 | 160 |
| Msa0704410 | AT3G51290.3 | 30.220 | 364 | 220 | 8 | 265 | 627 | 195 | 525 | 3.67e-42 | 163 |
| Msa0704410 | AT3G51290.2 | 30.220 | 364 | 220 | 8 | 265 | 627 | 195 | 525 | 5.51e-42 | 164 |
| Msa0704410 | AT1G52320.2 | 31.111 | 360 | 202 | 10 | 266 | 621 | 349 | 666 | 1.87e-41 | 162 |
| Msa0704410 | AT1G52320.5 | 31.111 | 360 | 202 | 10 | 266 | 621 | 349 | 666 | 1.87e-41 | 162 |
| Msa0704410 | AT1G52320.1 | 31.111 | 360 | 202 | 10 | 266 | 621 | 326 | 643 | 1.91e-41 | 162 |
| Msa0704410 | AT3G51290.1 | 29.396 | 364 | 217 | 9 | 265 | 627 | 195 | 519 | 2.22e-37 | 149 |
| Msa0704410 | AT1G20530.1 | 27.735 | 393 | 232 | 9 | 249 | 638 | 212 | 555 | 1.11e-34 | 140 |
| Msa0704410 | AT4G30130.4 | 39.706 | 204 | 103 | 2 | 264 | 467 | 297 | 480 | 1.77e-30 | 127 |
| Msa0704410 | AT4G30130.4 | 28.333 | 180 | 94 | 5 | 1 | 158 | 1 | 167 | 2.11e-12 | 70.9 |
| Msa0704410 | AT4G30130.2 | 39.706 | 204 | 103 | 2 | 264 | 467 | 297 | 480 | 1.77e-30 | 127 |
| Msa0704410 | AT4G30130.2 | 28.333 | 180 | 94 | 5 | 1 | 158 | 1 | 167 | 2.11e-12 | 70.9 |
| Msa0704410 | AT5G25590.1 | 28.099 | 363 | 211 | 10 | 271 | 625 | 330 | 650 | 1.81e-30 | 128 |
| Msa0704410 | AT1G02110.1 | 27.717 | 368 | 213 | 10 | 270 | 630 | 273 | 594 | 3.89e-28 | 120 |
| Msa0704410 | AT2G34670.2 | 30.962 | 239 | 155 | 3 | 384 | 620 | 333 | 563 | 1.59e-27 | 119 |
| Msa0704410 | AT3G60320.1 | 27.446 | 368 | 225 | 8 | 268 | 631 | 353 | 682 | 1.65e-26 | 116 |
| Msa0704410 | AT5G54480.1 | 30.660 | 212 | 133 | 4 | 382 | 592 | 394 | 592 | 1.19e-24 | 110 |
| Msa0704410 | AT2G34670.1 | 30.734 | 218 | 141 | 3 | 384 | 599 | 333 | 542 | 1.33e-22 | 102 |
Find 138 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCCACCTCCACCTGATTT+AGG | 0.188041 | 4_4:-76887325 | Msa0704410:CDS |
| TTCTCAGCAACATTATTTAA+AGG | 0.197214 | 4_4:+76887508 | None:intergenic |
| CAACGATGCTTCGGAAAATT+TGG | 0.223748 | 4_4:+76883653 | None:intergenic |
| GATAGGGAAGTCGTCTAAAT+TGG | 0.277408 | 4_4:-76886698 | Msa0704410:intron |
| CTAGAAGAAATCGAGTTATT+TGG | 0.303994 | 4_4:-76884074 | Msa0704410:CDS |
| TTCATTCGAGCTTCGGAATC+TGG | 0.314092 | 4_4:-76886911 | Msa0704410:CDS |
| AGAGTTGTATCCGCAACTTC+TGG | 0.320251 | 4_4:-76884378 | Msa0704410:CDS |
| TCTCTTAGAAATGTTGGTAT+AGG | 0.323214 | 4_4:-76887628 | Msa0704410:CDS |
| ATGTTAATTCTCAACTATAT+AGG | 0.325380 | 4_4:-76883550 | Msa0704410:exon |
| CTTTGTGCTGCTGTATGCTT+TGG | 0.333899 | 4_4:-76883527 | Msa0704410:three_prime_UTR |
| GTAGAAACAGGTGTTGAAAA+AGG | 0.341916 | 4_4:+76887451 | None:intergenic |
| TCTTGGGATTTCTTTGACCC+TGG | 0.346261 | 4_4:-76887298 | Msa0704410:CDS |
| ACCTGATTTAGGTGCATCTT+GGG | 0.359970 | 4_4:-76887314 | Msa0704410:CDS |
| CACCTGATTTAGGTGCATCT+TGG | 0.372611 | 4_4:-76887315 | Msa0704410:CDS |
| TGAAGATGTATGAAGATATC+AGG | 0.386728 | 4_4:-76883632 | Msa0704410:CDS |
| CTATGCCGTGATTGGTGTGC+TGG | 0.391046 | 4_4:-76883900 | Msa0704410:CDS |
| ACTGTTACACTTGATGCTTT+TGG | 0.397959 | 4_4:-76887391 | Msa0704410:CDS |
| GAAGAGTTCTGCATGATTGC+TGG | 0.403935 | 4_4:-76884947 | Msa0704410:CDS |
| TGAAGCATTGAGTTTATGTA+AGG | 0.411378 | 4_4:-76887725 | Msa0704410:CDS |
| AAATCTTGATGTGGCTGAAA+AGG | 0.414732 | 4_4:-76887083 | Msa0704410:CDS |
| AGATGTTTCAAGGCTGTTAG+AGG | 0.416903 | 4_4:-76886885 | Msa0704410:CDS |
| TTGCTCCTGGTACGTTCCCT+TGG | 0.417781 | 4_4:+76883969 | None:intergenic |
| TCCCTTTGGCTTCAAAATCA+AGG | 0.418316 | 4_4:-76885003 | Msa0704410:CDS |
| AGTCTTTCTGCGGCAACAAA+CGG | 0.422249 | 4_4:+76886654 | None:intergenic |
| GTCTTTCTGCGGCAACAAAC+GGG | 0.424934 | 4_4:+76886655 | None:intergenic |
| ATTCAATCTCTTAGAAATGT+TGG | 0.425409 | 4_4:-76887634 | Msa0704410:CDS |
| TAAAACTTACCCTGGAAAAC+AGG | 0.428606 | 4_4:+76886628 | None:intergenic |
| TGATTGGTGTGCTGGGATCC+AGG | 0.432860 | 4_4:-76883892 | Msa0704410:CDS |
| GTTCTCCCCTCGTCGAGCTC+TGG | 0.440226 | 4_4:-76883940 | Msa0704410:CDS |
| GTTGTTTCAAGTGGAGTTGA+AGG | 0.443756 | 4_4:-76887175 | Msa0704410:CDS |
| GCATAGGTTCATTCGAGCTT+CGG | 0.444759 | 4_4:-76886918 | Msa0704410:CDS |
| ATTTCTCTGCGTGCATCTCC+TGG | 0.446501 | 4_4:+76884110 | None:intergenic |
| AGTTGAAGGTTGCAAACAAT+TGG | 0.447867 | 4_4:-76887161 | Msa0704410:CDS |
| ATACATCTTCAACGATGCTT+CGG | 0.449747 | 4_4:+76883644 | None:intergenic |
| ATCCTCGTCCAGGATCCCTT+TGG | 0.450789 | 4_4:-76885017 | Msa0704410:CDS |
| CTAGTGAGTTCGAAGATTGC+AGG | 0.460016 | 4_4:-76887234 | Msa0704410:CDS |
| TCCCAAGATGCACCTAAATC+AGG | 0.460107 | 4_4:+76887313 | None:intergenic |
| AGGGATCAGTGGTTACAAAC+TGG | 0.463236 | 4_4:-76887214 | Msa0704410:CDS |
| TGTCGATCACTTGAGTGCCT+TGG | 0.466505 | 4_4:+76884498 | None:intergenic |
| AAGGGTAACTAGTTTGAGAT+GGG | 0.468402 | 4_4:+76887542 | None:intergenic |
| AGGGAAGATATTGATGATAG+TGG | 0.475279 | 4_4:-76884983 | Msa0704410:CDS |
| GCGGCAACAAACGGGCTGAA+TGG | 0.475599 | 4_4:+76886663 | None:intergenic |
| AAACTCTCACTATCCTCTCC+AGG | 0.476724 | 4_4:+76887280 | None:intergenic |
| AGAATGATATGCCAAGGAAA+TGG | 0.481755 | 4_4:+76884154 | None:intergenic |
| ATGTAACTAACAGTAGAAAC+AGG | 0.481798 | 4_4:+76887439 | None:intergenic |
| GTCGGATCTTCACAATCTGA+TGG | 0.481913 | 4_4:-76883826 | Msa0704410:CDS |
| AAATAATGTTGCTGAGAATG+AGG | 0.483016 | 4_4:-76887503 | Msa0704410:CDS |
| ATTGAGAGCTTCCACATATG+AGG | 0.489050 | 4_4:+76884019 | None:intergenic |
| CCTAAATCAGGTGGAGGTGG+AGG | 0.489973 | 4_4:+76887325 | None:intergenic |
| CTCAAGTGATCGACAAGACC+AGG | 0.490823 | 4_4:-76884490 | Msa0704410:CDS |
| AACACAACAGGAACCTTGCC+AGG | 0.493027 | 4_4:-76884128 | Msa0704410:CDS |
| TTGCAAATTGATGTCTAAGC+TGG | 0.494038 | 4_4:+76884525 | None:intergenic |
| CCCTTGACAGATTGTATGCA+TGG | 0.498810 | 4_4:-76884910 | Msa0704410:CDS |
| GAAGGGTAACTAGTTTGAGA+TGG | 0.502033 | 4_4:+76887541 | None:intergenic |
| TATCATTCTAGAAACACAAC+AGG | 0.503423 | 4_4:-76884140 | Msa0704410:CDS |
| GAGGCAAACAAAATCAAGGT+TGG | 0.504074 | 4_4:-76886866 | Msa0704410:CDS |
| ACATTATTTAAAGGTGATGA+AGG | 0.505480 | 4_4:+76887517 | None:intergenic |
| TCTGCGTGCATCTCCTGGCA+AGG | 0.512870 | 4_4:+76884115 | None:intergenic |
| GCAATACATCACCATTTCCT+TGG | 0.515910 | 4_4:-76884165 | Msa0704410:CDS |
| AATCTTGATGTGGCTGAAAA+GGG | 0.516350 | 4_4:-76887082 | Msa0704410:CDS |
| GCACCAGGTGGTACTGTTGG+TGG | 0.519535 | 4_4:-76887112 | Msa0704410:CDS |
| CCCTTTGGCTTCAAAATCAA+GGG | 0.522038 | 4_4:-76885002 | Msa0704410:CDS |
| TGCAGGCTAGTGAATCCATC+AGG | 0.522957 | 4_4:-76884571 | Msa0704410:intron |
| GCACCTAAATCAGGTGGAGG+TGG | 0.527111 | 4_4:+76887322 | None:intergenic |
| AATCTGGTAGAGATGTTTCA+AGG | 0.529347 | 4_4:-76886895 | Msa0704410:CDS |
| ATGGCTGGTGCAGATTGGTC+AGG | 0.532640 | 4_4:-76884220 | Msa0704410:intron |
| GCTGAAAAGGGTGTTGATGT+TGG | 0.534362 | 4_4:-76887070 | Msa0704410:CDS |
| GAGGCACCAGGTGGTACTGT+TGG | 0.534851 | 4_4:-76887115 | Msa0704410:CDS |
| CAGATCCTTCACAACTGCCC+TGG | 0.535042 | 4_4:+76884472 | None:intergenic |
| AAAACTCTATGATGAAGTAA+AGG | 0.535638 | 4_4:-76884882 | Msa0704410:intron |
| GTGAGACAGTTGGAGGCACC+AGG | 0.540258 | 4_4:-76887127 | Msa0704410:CDS |
| GATCCTTCAGTTGTTTCAAG+TGG | 0.540416 | 4_4:-76887184 | Msa0704410:CDS |
| ATCTGTCAAGGGTGGACGAA+TGG | 0.540817 | 4_4:+76884921 | None:intergenic |
| GGTGCAGATTGGTCAGGATG+TGG | 0.543685 | 4_4:-76884214 | Msa0704410:intron |
| TTTAAAGGTGATGAAGGAGA+AGG | 0.544934 | 4_4:+76887523 | None:intergenic |
| AGCCAAAGGGATCCTGGACG+AGG | 0.548609 | 4_4:+76885015 | None:intergenic |
| AGGGTAACTAGTTTGAGATG+GGG | 0.549838 | 4_4:+76887543 | None:intergenic |
| TTAAAGGTGATGAAGGAGAA+GGG | 0.551244 | 4_4:+76887524 | None:intergenic |
| GGTTGCAAACAATTGGATGA+TGG | 0.552751 | 4_4:-76887154 | Msa0704410:CDS |
| CAAGACCAGGGCAGTTGTGA+AGG | 0.553295 | 4_4:-76884477 | Msa0704410:CDS |
| TGGAAGATCAAGTTCAAAGA+AGG | 0.553913 | 4_4:-76887050 | Msa0704410:CDS |
| TAACAGCCACACCTCATATG+TGG | 0.556807 | 4_4:-76884030 | Msa0704410:CDS |
| TCATATGTGGAAGCTCTCAA+TGG | 0.556987 | 4_4:-76884017 | Msa0704410:CDS |
| TATGCCGTGATTGGTGTGCT+GGG | 0.557768 | 4_4:-76883899 | Msa0704410:CDS |
| GTTCTTCAGAGGGTAAAGCC+TGG | 0.558364 | 4_4:+76883874 | None:intergenic |
| GTTAGAGGCAAACAAAATCA+AGG | 0.561899 | 4_4:-76886870 | Msa0704410:CDS |
| AGAGCTCGACGAGGGGAGAA+CGG | 0.563598 | 4_4:+76883942 | None:intergenic |
| AATTATTAGTTGGAAAAGGA+CGG | 0.568108 | 4_4:-76885053 | Msa0704410:CDS |
| CCCATGCATACAATCTGTCA+AGG | 0.568925 | 4_4:+76884909 | None:intergenic |
| AAAGGACTTTCATTATGCAA+AGG | 0.572304 | 4_4:+76887469 | None:intergenic |
| TCGATCATAGACCTTCCTGA+TGG | 0.573804 | 4_4:+76884556 | None:intergenic |
| GTTAGTTACATGAGATCAAG+TGG | 0.575677 | 4_4:-76887427 | Msa0704410:CDS |
| TGCATCACTAAGTTCTTCAG+AGG | 0.575975 | 4_4:+76883863 | None:intergenic |
| ATCAAGTTCAAAGAAGGAGG+AGG | 0.577099 | 4_4:-76887044 | Msa0704410:CDS |
| AAATGTATCTGCAGAAAGAG+AGG | 0.585252 | 4_4:-76887002 | Msa0704410:CDS |
| GGTCAGTCGATCAAGAACCT+TGG | 0.587010 | 4_4:+76883674 | None:intergenic |
| TGATGGAAATGTGAGACAGT+TGG | 0.589991 | 4_4:-76887137 | Msa0704410:CDS |
| TGGAGCCAGAGCTCGACGAG+GGG | 0.590546 | 4_4:+76883935 | None:intergenic |
| GGATTTCTTTGACCCTGGAG+AGG | 0.591300 | 4_4:-76887293 | Msa0704410:CDS |
| GGATCCCAGCACACCAATCA+CGG | 0.597262 | 4_4:+76883895 | None:intergenic |
| CACGCAGAGAAATAATGACT+CGG | 0.598054 | 4_4:-76884100 | Msa0704410:CDS |
| ACTCCACTTGAAACAACTGA+AGG | 0.600121 | 4_4:+76887181 | None:intergenic |
| CAACTTCTGGAATTAACAGA+GGG | 0.600751 | 4_4:-76884365 | Msa0704410:CDS |
| AACTCTCACTATCCTCTCCA+GGG | 0.602519 | 4_4:+76887281 | None:intergenic |
| TCGAAGATTGCAGGGATCAG+TGG | 0.604307 | 4_4:-76887225 | Msa0704410:CDS |
| GTTTCTAGAATGATATGCCA+AGG | 0.606062 | 4_4:+76884148 | None:intergenic |
| GTGGAGCCAGAGCTCGACGA+GGG | 0.610750 | 4_4:+76883934 | None:intergenic |
| CTGTGAGTGATGAACTCTGA+AGG | 0.613324 | 4_4:+76886977 | None:intergenic |
| AAGATCAAGTTCAAAGAAGG+AGG | 0.618527 | 4_4:-76887047 | Msa0704410:CDS |
| CCTTGACAGATTGTATGCAT+GGG | 0.619343 | 4_4:-76884909 | Msa0704410:CDS |
| TAGTGAGTTCGAAGATTGCA+GGG | 0.621631 | 4_4:-76887233 | Msa0704410:CDS |
| GATGCACCTAAATCAGGTGG+AGG | 0.625726 | 4_4:+76887319 | None:intergenic |
| TGCATACAATCTGTCAAGGG+TGG | 0.626878 | 4_4:+76884913 | None:intergenic |
| ATGTGGAAGCTCTCAATGGT+TGG | 0.626950 | 4_4:-76884013 | Msa0704410:CDS |
| GCATCACTAAGTTCTTCAGA+GGG | 0.627690 | 4_4:+76883864 | None:intergenic |
| CAAGATGCACCTAAATCAGG+TGG | 0.629553 | 4_4:+76887316 | None:intergenic |
| CAGATTGGTCAGGATGTGGA+AGG | 0.631108 | 4_4:-76884210 | Msa0704410:CDS |
| TCTGCACTCGCGAATTAGAG+TGG | 0.639191 | 4_4:-76884453 | Msa0704410:CDS |
| GGCTAGTGAATCCATCAGGA+AGG | 0.642992 | 4_4:-76884567 | Msa0704410:CDS |
| TCTGTTAATTCCAGAAGTTG+CGG | 0.644448 | 4_4:+76884368 | None:intergenic |
| GCATAAAGGATATAGAGCAT+AGG | 0.644705 | 4_4:-76886934 | Msa0704410:CDS |
| CCATGCATACAATCTGTCAA+GGG | 0.647379 | 4_4:+76884910 | None:intergenic |
| TGTACATGCAAGTTTAACCA+AGG | 0.665329 | 4_4:-76883691 | Msa0704410:CDS |
| TCACCACCAACAGTACCACC+TGG | 0.666374 | 4_4:+76887109 | None:intergenic |
| CATCAATTTGCAAAAGACCA+AGG | 0.673397 | 4_4:-76884515 | Msa0704410:CDS |
| GAAGGAGGAGGAGAAGAACA+TGG | 0.678950 | 4_4:-76887032 | Msa0704410:CDS |
| AAACAGGTGAAGTCTTTCTG+CGG | 0.683062 | 4_4:+76886644 | None:intergenic |
| TGGAAATGTGAGACAGTTGG+AGG | 0.684589 | 4_4:-76887134 | Msa0704410:CDS |
| TGGTGACATAAATCTTGATG+TGG | 0.685432 | 4_4:-76887092 | Msa0704410:CDS |
| ATCAAAACTAATGAAGACAG+CGG | 0.696867 | 4_4:-76883738 | Msa0704410:CDS |
| GCAACTTCTGGAATTAACAG+AGG | 0.697401 | 4_4:-76884366 | Msa0704410:CDS |
| GAGCTTCCACATATGAGGTG+TGG | 0.703175 | 4_4:+76884024 | None:intergenic |
| TCAAGTGATCGACAAGACCA+GGG | 0.705692 | 4_4:-76884489 | Msa0704410:CDS |
| AAAACTAATGAAGACAGCGG+AGG | 0.716696 | 4_4:-76883735 | Msa0704410:CDS |
| AGACAGTTGGAGGCACCAGG+TGG | 0.721500 | 4_4:-76887124 | Msa0704410:CDS |
| GGTGGAGCCAGAGCTCGACG+AGG | 0.727010 | 4_4:+76883933 | None:intergenic |
| AGGTGGAGGAGAAAACACAT+TGG | 0.737795 | 4_4:+76887339 | None:intergenic |
| AACTTCTGGAATTAACAGAG+GGG | 0.764599 | 4_4:-76884364 | Msa0704410:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAACTAATATCATAAAAA+AGG | - | chr4_4:76886374-76886393 | Msa0704410:intron | 10.0% |
| !! | ATAACTAATATCATAAAAAA+GGG | - | chr4_4:76886375-76886394 | Msa0704410:intron | 10.0% |
| !! | AAACATATATGTAATGTTTA+AGG | + | chr4_4:76884691-76884710 | None:intergenic | 15.0% |
| !! | AAACAAAAACAACAAAAATA+AGG | + | chr4_4:76885634-76885653 | None:intergenic | 15.0% |
| !!! | TTTTTGTTTTTATGAAATAG+TGG | - | chr4_4:76885645-76885664 | Msa0704410:intron | 15.0% |
| !!! | TTTGACTTGAAATATTAATA+CGG | - | chr4_4:76886116-76886135 | Msa0704410:intron | 15.0% |
| !! | AAAAAATTATTAGTTGGAAA+AGG | - | chr4_4:76886176-76886195 | Msa0704410:intron | 15.0% |
| !! | TAACTAATATCATAAAAAAG+GGG | - | chr4_4:76886376-76886395 | Msa0704410:intron | 15.0% |
| !! | TAAAAGAATTGAAAAAATGA+GGG | - | chr4_4:76886828-76886847 | Msa0704410:intron | 15.0% |
| !!! | TATAACTACTATTTGATTTA+TGG | - | chr4_4:76886994-76887013 | Msa0704410:CDS | 15.0% |
| !!! | GGAAAGAAAAAGTTTTATTA+AGG | - | chr4_4:76883529-76883548 | Msa0704410:three_prime_UTR | 20.0% |
| !!! | AAGAAAAAGTTTTATTAAGG+TGG | - | chr4_4:76883532-76883551 | Msa0704410:three_prime_UTR | 20.0% |
| !!! | TTTTGTGTATAAAATGCAAT+TGG | - | chr4_4:76884450-76884469 | Msa0704410:CDS | 20.0% |
| !! | ACATTACATATATGTTTGTT+TGG | - | chr4_4:76884694-76884713 | Msa0704410:intron | 20.0% |
| !! | CATTACATATATGTTTGTTT+GGG | - | chr4_4:76884695-76884714 | Msa0704410:intron | 20.0% |
| !!! | TCATCTTATTTTTCAAGAAA+TGG | + | chr4_4:76884725-76884744 | None:intergenic | 20.0% |
| !!! | AAACATGAATGATTTTCATT+TGG | - | chr4_4:76884845-76884864 | Msa0704410:intron | 20.0% |
| !!! | ATGATTTTCATTTGGAATTT+TGG | - | chr4_4:76884853-76884872 | Msa0704410:intron | 20.0% |
| !! | AAGGCTAATAAAGAAAAAAA+TGG | - | chr4_4:76885087-76885106 | Msa0704410:intron | 20.0% |
| !! | TTTCTCTTAAAATGAAATAG+CGG | + | chr4_4:76885289-76885308 | None:intergenic | 20.0% |
| !! | CTGTTAAACAAAAAAATAAC+AGG | + | chr4_4:76885444-76885463 | None:intergenic | 20.0% |
| !!! | CAACTAATAATTTTTTGTAC+AGG | + | chr4_4:76886172-76886191 | None:intergenic | 20.0% |
| !! | CTGTACAAAAAATTATTAGT+TGG | - | chr4_4:76886170-76886189 | Msa0704410:intron | 20.0% |
| !! | AACTAAATACTCATGTAAAT+TGG | + | chr4_4:76886480-76886499 | None:intergenic | 20.0% |
| !! | ACTATTGAAACTATGAAAAT+TGG | + | chr4_4:76886608-76886627 | None:intergenic | 20.0% |
| !! | CTAAAAGAATTGAAAAAATG+AGG | - | chr4_4:76886827-76886846 | Msa0704410:intron | 20.0% |
| !! | ATGTTAATTCTCAACTATAT+AGG | - | chr4_4:76887683-76887702 | Msa0704410:CDS | 20.0% |
| !!! | CATGTTCATAGTTTTTTTTA+GGG | + | chr4_4:76887757-76887776 | None:intergenic | 20.0% |
| !!! | ACATGTTCATAGTTTTTTTT+AGG | + | chr4_4:76887758-76887777 | None:intergenic | 20.0% |
| ! | ATTCAATCTCTTAGAAATGT+TGG | - | chr4_4:76883599-76883618 | Msa0704410:CDS | 25.0% |
| ! | ACATTATTTAAAGGTGATGA+AGG | + | chr4_4:76883719-76883738 | None:intergenic | 25.0% |
| ! | TTCTCAGCAACATTATTTAA+AGG | + | chr4_4:76883728-76883747 | None:intergenic | 25.0% |
| !!! | AGATTTTCTTTCTAGCATAA+AGG | - | chr4_4:76884285-76884304 | Msa0704410:intron | 25.0% |
| ! | CATGAAGTTATTCACTTATT+TGG | - | chr4_4:76884899-76884918 | Msa0704410:CDS | 25.0% |
| !! | AGTTTTCCTTCATAGAAAAA+AGG | - | chr4_4:76884946-76884965 | Msa0704410:CDS | 25.0% |
| !!! | TTTTTTCTTTATTAGCCTTG+TGG | + | chr4_4:76885086-76885105 | None:intergenic | 25.0% |
| ! | AGAAAATACAAAATTGTCCT+TGG | - | chr4_4:76885304-76885323 | Msa0704410:intron | 25.0% |
| ! | TCCTTGGTTTAAAAAAAACA+AGG | - | chr4_4:76885320-76885339 | Msa0704410:intron | 25.0% |
| ! | CCTTGGTTTAAAAAAAACAA+GGG | - | chr4_4:76885321-76885340 | Msa0704410:intron | 25.0% |
| ! | CCATAATAACAAAGAAAACT+AGG | + | chr4_4:76885500-76885519 | None:intergenic | 25.0% |
| !!! | CCTAGTTTTCTTTGTTATTA+TGG | - | chr4_4:76885497-76885516 | Msa0704410:intron | 25.0% |
| !! | GTTTTATATGAACAAAACAG+AGG | + | chr4_4:76885577-76885596 | None:intergenic | 25.0% |
| ! | AAAACCATAGTAGTTAATAG+CGG | + | chr4_4:76885732-76885751 | None:intergenic | 25.0% |
| ! | ATCTTGATAGAAACTAGAAA+TGG | - | chr4_4:76885854-76885873 | Msa0704410:intron | 25.0% |
| ! | TACAGGTTCTATACATAAAA+GGG | + | chr4_4:76886155-76886174 | None:intergenic | 25.0% |
| ! | AATTATTAGTTGGAAAAGGA+CGG | - | chr4_4:76886180-76886199 | Msa0704410:intron | 25.0% |
| ! | AAAACTCTATGATGAAGTAA+AGG | - | chr4_4:76886351-76886370 | Msa0704410:intron | 25.0% |
| !! | AAAGTATTTCTAACTGGATA+AGG | - | chr4_4:76886407-76886426 | Msa0704410:intron | 25.0% |
| ! | AAGGAATAAAAACATTCAGA+GGG | + | chr4_4:76886523-76886542 | None:intergenic | 25.0% |
| ! | AAAGGAATAAAAACATTCAG+AGG | + | chr4_4:76886524-76886543 | None:intergenic | 25.0% |
| !!! | GAATGTTTTTATTCCTTTCA+AGG | - | chr4_4:76886526-76886545 | Msa0704410:intron | 25.0% |
| !! | TGAAGCATTGAGTTTATGTA+AGG | - | chr4_4:76883508-76883527 | Msa0704410:three_prime_UTR | 30.0% |
| TCTCTTAGAAATGTTGGTAT+AGG | - | chr4_4:76883605-76883624 | Msa0704410:CDS | 30.0% | |
| AAATAATGTTGCTGAGAATG+AGG | - | chr4_4:76883730-76883749 | Msa0704410:CDS | 30.0% | |
| AAAGGACTTTCATTATGCAA+AGG | + | chr4_4:76883767-76883786 | None:intergenic | 30.0% | |
| ATGTAACTAACAGTAGAAAC+AGG | + | chr4_4:76883797-76883816 | None:intergenic | 30.0% | |
| AAATAGGTTAAAACTTACCC+TGG | + | chr4_4:76884616-76884635 | None:intergenic | 30.0% | |
| TAGTGTCTGTATACAGAAAT+AGG | + | chr4_4:76884632-76884651 | None:intergenic | 30.0% | |
| AATCTTTAGCAGCTAAATGA+TGG | - | chr4_4:76884659-76884678 | Msa0704410:intron | 30.0% | |
| ATCTTTAGCAGCTAAATGAT+GGG | - | chr4_4:76884660-76884679 | Msa0704410:intron | 30.0% | |
| AAACTAAACGTTCATCAAAG+TGG | + | chr4_4:76884819-76884838 | None:intergenic | 30.0% | |
| ACTTTGATGAACGTTTAGTT+TGG | - | chr4_4:76884818-76884837 | Msa0704410:intron | 30.0% | |
| ! | TTTGGATGTCTATTAGTTTG+TGG | - | chr4_4:76884917-76884936 | Msa0704410:CDS | 30.0% |
| !! | TTGGATGTCTATTAGTTTGT+GGG | - | chr4_4:76884918-76884937 | Msa0704410:CDS | 30.0% |
| !!! | TTTGCCGATTTTGTACAAAA+TGG | + | chr4_4:76884974-76884993 | None:intergenic | 30.0% |
| AATGCATATCAAACATGTAG+CGG | - | chr4_4:76884992-76885011 | Msa0704410:CDS | 30.0% | |
| !!! | CCCTTGTTTTTTTTAAACCA+AGG | + | chr4_4:76885324-76885343 | None:intergenic | 30.0% |
| AACTAGGACAAAAAAGTAAC+AGG | + | chr4_4:76885484-76885503 | None:intergenic | 30.0% | |
| GTACAGGTTCTATACATAAA+AGG | + | chr4_4:76886156-76886175 | None:intergenic | 30.0% | |
| !! | CAGTTGAAAGTATTTCTAAC+TGG | - | chr4_4:76886401-76886420 | Msa0704410:intron | 30.0% |
| ATAAAAACATTCAGAGGGAA+GGG | + | chr4_4:76886518-76886537 | None:intergenic | 30.0% | |
| AATAAAAACATTCAGAGGGA+AGG | + | chr4_4:76886519-76886538 | None:intergenic | 30.0% | |
| ATATAGATAGTAAAGCTTCG+AGG | + | chr4_4:76886929-76886948 | None:intergenic | 30.0% | |
| ! | ACTACTATTTGATTTATGGC+TGG | - | chr4_4:76886998-76887017 | Msa0704410:CDS | 30.0% |
| ! | TATCATTCTAGAAACACAAC+AGG | - | chr4_4:76887093-76887112 | Msa0704410:CDS | 30.0% |
| CTAGAAGAAATCGAGTTATT+TGG | - | chr4_4:76887159-76887178 | Msa0704410:CDS | 30.0% | |
| ! | AACACTGTATACTTTTACCA+AGG | - | chr4_4:76887247-76887266 | Msa0704410:CDS | 30.0% |
| ! | ACACTGTATACTTTTACCAA+GGG | - | chr4_4:76887248-76887267 | Msa0704410:CDS | 30.0% |
| ! | TGCAATCAGAAACTTTTTGT+CGG | - | chr4_4:76887389-76887408 | Msa0704410:CDS | 30.0% |
| ATCAAAACTAATGAAGACAG+CGG | - | chr4_4:76887495-76887514 | Msa0704410:CDS | 30.0% | |
| TGAAGATGTATGAAGATATC+AGG | - | chr4_4:76887601-76887620 | Msa0704410:CDS | 30.0% | |
| ! | AAGGGTAACTAGTTTGAGAT+GGG | + | chr4_4:76883694-76883713 | None:intergenic | 35.0% |
| TTAAAGGTGATGAAGGAGAA+GGG | + | chr4_4:76883712-76883731 | None:intergenic | 35.0% | |
| TTTAAAGGTGATGAAGGAGA+AGG | + | chr4_4:76883713-76883732 | None:intergenic | 35.0% | |
| !! | GTAGAAACAGGTGTTGAAAA+AGG | + | chr4_4:76883785-76883804 | None:intergenic | 35.0% |
| GTTAGTTACATGAGATCAAG+TGG | - | chr4_4:76883806-76883825 | Msa0704410:CDS | 35.0% | |
| ! | ACTGTTACACTTGATGCTTT+TGG | - | chr4_4:76883842-76883861 | Msa0704410:CDS | 35.0% |
| !!! | AGTTTTAGGTTTGTAGTGCA+TGG | - | chr4_4:76883971-76883990 | Msa0704410:CDS | 35.0% |
| AGTTGAAGGTTGCAAACAAT+TGG | - | chr4_4:76884072-76884091 | Msa0704410:CDS | 35.0% | |
| TGGTGACATAAATCTTGATG+TGG | - | chr4_4:76884141-76884160 | Msa0704410:CDS | 35.0% | |
| AAATCTTGATGTGGCTGAAA+AGG | - | chr4_4:76884150-76884169 | Msa0704410:CDS | 35.0% | |
| AATCTTGATGTGGCTGAAAA+GGG | - | chr4_4:76884151-76884170 | Msa0704410:CDS | 35.0% | |
| TGGAAGATCAAGTTCAAAGA+AGG | - | chr4_4:76884183-76884202 | Msa0704410:CDS | 35.0% | |
| AAGATCAAGTTCAAAGAAGG+AGG | - | chr4_4:76884186-76884205 | Msa0704410:CDS | 35.0% | |
| AAATGTATCTGCAGAAAGAG+AGG | - | chr4_4:76884231-76884250 | Msa0704410:intron | 35.0% | |
| GCATAAAGGATATAGAGCAT+AGG | - | chr4_4:76884299-76884318 | Msa0704410:intron | 35.0% | |
| AATCTGGTAGAGATGTTTCA+AGG | - | chr4_4:76884338-76884357 | Msa0704410:intron | 35.0% | |
| GTTAGAGGCAAACAAAATCA+AGG | - | chr4_4:76884363-76884382 | Msa0704410:intron | 35.0% | |
| ! | GTTGGATTTTCTGATGCTAA+AGG | - | chr4_4:76884385-76884404 | Msa0704410:CDS | 35.0% |
| ATCTTCTTCAGACTTCTGAT+AGG | - | chr4_4:76884518-76884537 | Msa0704410:CDS | 35.0% | |
| TCTTCTTCAGACTTCTGATA+GGG | - | chr4_4:76884519-76884538 | Msa0704410:CDS | 35.0% | |
| TAAAACTTACCCTGGAAAAC+AGG | + | chr4_4:76884608-76884627 | None:intergenic | 35.0% | |
| ! | GAGCTTGTGTCTTTTTAATG+AGG | + | chr4_4:76884750-76884769 | None:intergenic | 35.0% |
| !!! | ATGGAGCCTTTTTTCTATGA+AGG | + | chr4_4:76884955-76884974 | None:intergenic | 35.0% |
| ! | GGCTCCATTTTGTACAAAAT+CGG | - | chr4_4:76884967-76884986 | Msa0704410:CDS | 35.0% |
| AAGCTAAGTATGTTGACATG+AGG | - | chr4_4:76885124-76885143 | Msa0704410:intron | 35.0% | |
| TTACCCATAGTAGTCAATAG+CGG | - | chr4_4:76885149-76885168 | Msa0704410:intron | 35.0% | |
| ! | TATCCCGCTATAGCATTTTT+GGG | - | chr4_4:76885684-76885703 | Msa0704410:intron | 35.0% |
| !! | TAGTAGTTAATAGCGGATAG+CGG | + | chr4_4:76885725-76885744 | None:intergenic | 35.0% |
| CTATCCGCTATTAACTACTA+TGG | - | chr4_4:76885725-76885744 | Msa0704410:intron | 35.0% | |
| !! | GTGTTTCAAAACTTGTTGCA+AGG | + | chr4_4:76885756-76885775 | None:intergenic | 35.0% |
| !!! | CAACAAGTTTTGAAACACAG+AGG | - | chr4_4:76885758-76885777 | Msa0704410:intron | 35.0% |
| !!! | TTCAAGTCTAGTGCCTTTTT+TGG | - | chr4_4:76886047-76886066 | Msa0704410:intron | 35.0% |
| ! | ATAGATTAGCTGGCCAAAAA+AGG | + | chr4_4:76886063-76886082 | None:intergenic | 35.0% |
| ! | AGGGAAGATATTGATGATAG+TGG | - | chr4_4:76886250-76886269 | Msa0704410:intron | 35.0% |
| TAAAAACATTCAGAGGGAAG+GGG | + | chr4_4:76886517-76886536 | None:intergenic | 35.0% | |
| TTTATTCCTTTCAAGGACAC+AGG | - | chr4_4:76886533-76886552 | Msa0704410:intron | 35.0% | |
| AATTATCCTGTGTCCTTGAA+AGG | + | chr4_4:76886542-76886561 | None:intergenic | 35.0% | |
| TTGCAAATTGATGTCTAAGC+TGG | + | chr4_4:76886711-76886730 | None:intergenic | 35.0% | |
| CATCAATTTGCAAAAGACCA+AGG | - | chr4_4:76886718-76886737 | Msa0704410:intron | 35.0% | |
| TCTGTTAATTCCAGAAGTTG+CGG | + | chr4_4:76886868-76886887 | None:intergenic | 35.0% | |
| !! | CAACTTCTGGAATTAACAGA+GGG | - | chr4_4:76886868-76886887 | Msa0704410:CDS | 35.0% |
| !! | AACTTCTGGAATTAACAGAG+GGG | - | chr4_4:76886869-76886888 | Msa0704410:CDS | 35.0% |
| AGAATGATATGCCAAGGAAA+TGG | + | chr4_4:76887082-76887101 | None:intergenic | 35.0% | |
| !! | GTTTCTAGAATGATATGCCA+AGG | + | chr4_4:76887088-76887107 | None:intergenic | 35.0% |
| TCACGGCATAGAACAAAAAT+AGG | + | chr4_4:76887324-76887343 | None:intergenic | 35.0% | |
| ! | TTTTTGTTCTATGCCGTGAT+TGG | - | chr4_4:76887325-76887344 | Msa0704410:CDS | 35.0% |
| !!! | TTAGTTTTGATCTCGCTTTC+TGG | + | chr4_4:76887486-76887505 | None:intergenic | 35.0% |
| TGTACATGCAAGTTTAACCA+AGG | - | chr4_4:76887542-76887561 | Msa0704410:CDS | 35.0% | |
| ATACATCTTCAACGATGCTT+CGG | + | chr4_4:76887592-76887611 | None:intergenic | 35.0% | |
| TATCAGGCAAAAAAGTGAAG+TGG | - | chr4_4:76887617-76887636 | Msa0704410:CDS | 35.0% | |
| ! | AGGGTAACTAGTTTGAGATG+GGG | + | chr4_4:76883693-76883712 | None:intergenic | 40.0% |
| ! | GAAGGGTAACTAGTTTGAGA+TGG | + | chr4_4:76883695-76883714 | None:intergenic | 40.0% |
| ACCTGATTTAGGTGCATCTT+GGG | - | chr4_4:76883919-76883938 | Msa0704410:CDS | 40.0% | |
| ! | GAGAGGATAGTGAGAGTTTT+AGG | - | chr4_4:76883957-76883976 | Msa0704410:CDS | 40.0% |
| TAGTGAGTTCGAAGATTGCA+GGG | - | chr4_4:76884000-76884019 | Msa0704410:CDS | 40.0% | |
| ! | GATCCTTCAGTTGTTTCAAG+TGG | - | chr4_4:76884049-76884068 | Msa0704410:CDS | 40.0% |
| ACTCCACTTGAAACAACTGA+AGG | + | chr4_4:76884055-76884074 | None:intergenic | 40.0% | |
| ! | GTTGTTTCAAGTGGAGTTGA+AGG | - | chr4_4:76884058-76884077 | Msa0704410:CDS | 40.0% |
| GGTTGCAAACAATTGGATGA+TGG | - | chr4_4:76884079-76884098 | Msa0704410:CDS | 40.0% | |
| TGATGGAAATGTGAGACAGT+TGG | - | chr4_4:76884096-76884115 | Msa0704410:CDS | 40.0% | |
| ATCAAGTTCAAAGAAGGAGG+AGG | - | chr4_4:76884189-76884208 | Msa0704410:CDS | 40.0% | |
| AGATGTTTCAAGGCTGTTAG+AGG | - | chr4_4:76884348-76884367 | Msa0704410:intron | 40.0% | |
| GAGGCAAACAAAATCAAGGT+TGG | - | chr4_4:76884367-76884386 | Msa0704410:CDS | 40.0% | |
| GATAGGGAAGTCGTCTAAAT+TGG | - | chr4_4:76884535-76884554 | Msa0704410:CDS | 40.0% | |
| AAACAGGTGAAGTCTTTCTG+CGG | + | chr4_4:76884592-76884611 | None:intergenic | 40.0% | |
| ! | AAAGACTTCACCTGTTTTCC+AGG | - | chr4_4:76884595-76884614 | Msa0704410:intron | 40.0% |
| ! | AAGACTTCACCTGTTTTCCA+GGG | - | chr4_4:76884596-76884615 | Msa0704410:intron | 40.0% |
| TCAATGCCTAGCAATAGAAC+AGG | - | chr4_4:76885054-76885073 | Msa0704410:CDS | 40.0% | |
| ! | CTATCCCGCTATAGCATTTT+TGG | - | chr4_4:76885683-76885702 | Msa0704410:intron | 40.0% |
| ! | ATCCCGCTATAGCATTTTTG+GGG | - | chr4_4:76885685-76885704 | Msa0704410:intron | 40.0% |
| TGACCCCAAAAATGCTATAG+CGG | + | chr4_4:76885691-76885710 | None:intergenic | 40.0% | |
| AGCGTAGCTAATAGATTAGC+TGG | + | chr4_4:76886073-76886092 | None:intergenic | 40.0% | |
| ! | TCCCTTTGGCTTCAAAATCA+AGG | - | chr4_4:76886230-76886249 | Msa0704410:intron | 40.0% |
| !!! | CCCTTGATTTTGAAGCCAAA+GGG | + | chr4_4:76886234-76886253 | None:intergenic | 40.0% |
| ! | CCCTTTGGCTTCAAAATCAA+GGG | - | chr4_4:76886231-76886250 | Msa0704410:intron | 40.0% |
| !!! | TCCCTTGATTTTGAAGCCAA+AGG | + | chr4_4:76886235-76886254 | None:intergenic | 40.0% |
| CCATGCATACAATCTGTCAA+GGG | + | chr4_4:76886326-76886345 | None:intergenic | 40.0% | |
| CCTTGACAGATTGTATGCAT+GGG | - | chr4_4:76886324-76886343 | Msa0704410:intron | 40.0% | |
| AAAAACATTCAGAGGGAAGG+GGG | + | chr4_4:76886516-76886535 | None:intergenic | 40.0% | |
| AGTCATTCTGTGACACCTAT+TGG | - | chr4_4:76886629-76886648 | Msa0704410:intron | 40.0% | |
| GTCATTCTGTGACACCTATT+GGG | - | chr4_4:76886630-76886649 | Msa0704410:intron | 40.0% | |
| !! | GCAACTTCTGGAATTAACAG+AGG | - | chr4_4:76886867-76886886 | Msa0704410:CDS | 40.0% |
| GATTTAACGCTCGATTGACA+AGG | + | chr4_4:76886974-76886993 | None:intergenic | 40.0% | |
| GCAATACATCACCATTTCCT+TGG | - | chr4_4:76887068-76887087 | Msa0704410:CDS | 40.0% | |
| CACGCAGAGAAATAATGACT+CGG | - | chr4_4:76887133-76887152 | Msa0704410:CDS | 40.0% | |
| ! | TTGGTCTGAGTTTTGCAAAC+TGG | - | chr4_4:76887178-76887197 | Msa0704410:CDS | 40.0% |
| ATTGAGAGCTTCCACATATG+AGG | + | chr4_4:76887217-76887236 | None:intergenic | 40.0% | |
| TCATATGTGGAAGCTCTCAA+TGG | - | chr4_4:76887216-76887235 | Msa0704410:CDS | 40.0% | |
| CGGCATAGAACAAAAATAGG+TGG | + | chr4_4:76887321-76887340 | None:intergenic | 40.0% | |
| GCATCACTAAGTTCTTCAGA+GGG | + | chr4_4:76887372-76887391 | None:intergenic | 40.0% | |
| TGCATCACTAAGTTCTTCAG+AGG | + | chr4_4:76887373-76887392 | None:intergenic | 40.0% | |
| AAAACTAATGAAGACAGCGG+AGG | - | chr4_4:76887498-76887517 | Msa0704410:CDS | 40.0% | |
| CAACGATGCTTCGGAAAATT+TGG | + | chr4_4:76887583-76887602 | None:intergenic | 40.0% | |
| AGGTGGAGGAGAAAACACAT+TGG | + | chr4_4:76883897-76883916 | None:intergenic | 45.0% | |
| CAAGATGCACCTAAATCAGG+TGG | + | chr4_4:76883920-76883939 | None:intergenic | 45.0% | |
| CACCTGATTTAGGTGCATCT+TGG | - | chr4_4:76883918-76883937 | Msa0704410:CDS | 45.0% | |
| TCCCAAGATGCACCTAAATC+AGG | + | chr4_4:76883923-76883942 | None:intergenic | 45.0% | |
| TCTTGGGATTTCTTTGACCC+TGG | - | chr4_4:76883935-76883954 | Msa0704410:CDS | 45.0% | |
| AACTCTCACTATCCTCTCCA+GGG | + | chr4_4:76883955-76883974 | None:intergenic | 45.0% | |
| AAACTCTCACTATCCTCTCC+AGG | + | chr4_4:76883956-76883975 | None:intergenic | 45.0% | |
| CTAGTGAGTTCGAAGATTGC+AGG | - | chr4_4:76883999-76884018 | Msa0704410:CDS | 45.0% | |
| AGGGATCAGTGGTTACAAAC+TGG | - | chr4_4:76884019-76884038 | Msa0704410:CDS | 45.0% | |
| TGGAAATGTGAGACAGTTGG+AGG | - | chr4_4:76884099-76884118 | Msa0704410:CDS | 45.0% | |
| !! | GCTGAAAAGGGTGTTGATGT+TGG | - | chr4_4:76884163-76884182 | Msa0704410:CDS | 45.0% |
| CTGTGAGTGATGAACTCTGA+AGG | + | chr4_4:76884259-76884278 | None:intergenic | 45.0% | |
| GCATAGGTTCATTCGAGCTT+CGG | - | chr4_4:76884315-76884334 | Msa0704410:intron | 45.0% | |
| TTCATTCGAGCTTCGGAATC+TGG | - | chr4_4:76884322-76884341 | Msa0704410:intron | 45.0% | |
| AGTCTTTCTGCGGCAACAAA+CGG | + | chr4_4:76884582-76884601 | None:intergenic | 45.0% | |
| CATGTGCCTGTTCTATTGCT+AGG | + | chr4_4:76885063-76885082 | None:intergenic | 45.0% | |
| ! | TGGCCGCTATTGACTACTAT+GGG | + | chr4_4:76885155-76885174 | None:intergenic | 45.0% |
| ! | TTGGCCGCTATTGACTACTA+TGG | + | chr4_4:76885156-76885175 | None:intergenic | 45.0% |
| ATAGCGTTGCAGTGAGATAG+CGG | - | chr4_4:76885230-76885249 | Msa0704410:intron | 45.0% | |
| ACAGAACAGCAGAAAAGCAG+AGG | + | chr4_4:76885363-76885382 | None:intergenic | 45.0% | |
| AGAGAGAGCAGAATGGAGTT+TGG | + | chr4_4:76885526-76885545 | None:intergenic | 45.0% | |
| CAGAAACAGAGAGAGCAGAA+TGG | + | chr4_4:76885533-76885552 | None:intergenic | 45.0% | |
| GACCCCAAAAATGCTATAGC+GGG | + | chr4_4:76885690-76885709 | None:intergenic | 45.0% | |
| GTTGCAAGCTGAGAACAGAT+AGG | - | chr4_4:76885961-76885980 | Msa0704410:intron | 45.0% | |
| GTTCTGCTTCAGCTCAGATT+GGG | + | chr4_4:76885995-76886014 | None:intergenic | 45.0% | |
| AGTTCTGCTTCAGCTCAGAT+TGG | + | chr4_4:76885996-76886015 | None:intergenic | 45.0% | |
| !!! | TTTTGAAGCCAAAGGGATCC+TGG | + | chr4_4:76886227-76886246 | None:intergenic | 45.0% |
| GAAGAGTTCTGCATGATTGC+TGG | - | chr4_4:76886286-76886305 | Msa0704410:intron | 45.0% | |
| TGCATACAATCTGTCAAGGG+TGG | + | chr4_4:76886323-76886342 | None:intergenic | 45.0% | |
| CCCTTGACAGATTGTATGCA+TGG | - | chr4_4:76886323-76886342 | Msa0704410:intron | 45.0% | |
| CCCATGCATACAATCTGTCA+AGG | + | chr4_4:76886327-76886346 | None:intergenic | 45.0% | |
| CTGCATACAGATAGCCCAAT+AGG | + | chr4_4:76886647-76886666 | None:intergenic | 45.0% | |
| CTATTGGGCTATCTGTATGC+AGG | - | chr4_4:76886645-76886664 | Msa0704410:CDS | 45.0% | |
| TCGATCATAGACCTTCCTGA+TGG | + | chr4_4:76886680-76886699 | None:intergenic | 45.0% | |
| TCAAGTGATCGACAAGACCA+GGG | - | chr4_4:76886744-76886763 | Msa0704410:intron | 45.0% | |
| AGAGTTGTATCCGCAACTTC+TGG | - | chr4_4:76886855-76886874 | Msa0704410:CDS | 45.0% | |
| GATTTATGGCTGGTGCAGAT+TGG | - | chr4_4:76887008-76887027 | Msa0704410:CDS | 45.0% | |
| TAACAGCCACACCTCATATG+TGG | - | chr4_4:76887203-76887222 | Msa0704410:CDS | 45.0% | |
| ATGTGGAAGCTCTCAATGGT+TGG | - | chr4_4:76887220-76887239 | Msa0704410:CDS | 45.0% | |
| ! | TTTTACCAAGGGAACGTACC+AGG | - | chr4_4:76887259-76887278 | Msa0704410:CDS | 45.0% |
| GTCGGATCTTCACAATCTGA+TGG | - | chr4_4:76887407-76887426 | Msa0704410:CDS | 45.0% | |
| GGCAAAAAAGTGAAGTGGCT+CGG | - | chr4_4:76887622-76887641 | Msa0704410:CDS | 45.0% | |
| ! | CTTTGTGCTGCTGTATGCTT+TGG | - | chr4_4:76887706-76887725 | Msa0704410:CDS | 45.0% |
| GATGCACCTAAATCAGGTGG+AGG | + | chr4_4:76883917-76883936 | None:intergenic | 50.0% | |
| GGATTTCTTTGACCCTGGAG+AGG | - | chr4_4:76883940-76883959 | Msa0704410:CDS | 50.0% | |
| TCGAAGATTGCAGGGATCAG+TGG | - | chr4_4:76884008-76884027 | Msa0704410:CDS | 50.0% | |
| GAAGGAGGAGGAGAAGAACA+TGG | - | chr4_4:76884201-76884220 | Msa0704410:CDS | 50.0% | |
| GTCTTTCTGCGGCAACAAAC+GGG | + | chr4_4:76884581-76884600 | None:intergenic | 50.0% | |
| TAGAACAGGCACATGCCACA+AGG | - | chr4_4:76885068-76885087 | Msa0704410:CDS | 50.0% | |
| GCTATCTCACTGCAACGCTA+TGG | + | chr4_4:76885231-76885250 | None:intergenic | 50.0% | |
| GAGCAAACGCGACAAAGTAG+AGG | + | chr4_4:76885415-76885434 | None:intergenic | 50.0% | |
| !! | CTGTGCTGACTCAGCACAAT+TGG | - | chr4_4:76886014-76886033 | Msa0704410:intron | 50.0% |
| ! | CTTTTCGATCATCCTCGTCC+AGG | - | chr4_4:76886206-76886225 | Msa0704410:intron | 50.0% |
| ATCTGTCAAGGGTGGACGAA+TGG | + | chr4_4:76886315-76886334 | None:intergenic | 50.0% | |
| TGCAGGCTAGTGAATCCATC+AGG | - | chr4_4:76886662-76886681 | Msa0704410:CDS | 50.0% | |
| GGCTAGTGAATCCATCAGGA+AGG | - | chr4_4:76886666-76886685 | Msa0704410:CDS | 50.0% | |
| TGTCGATCACTTGAGTGCCT+TGG | + | chr4_4:76886738-76886757 | None:intergenic | 50.0% | |
| CTCAAGTGATCGACAAGACC+AGG | - | chr4_4:76886743-76886762 | Msa0704410:intron | 50.0% | |
| TCTGCACTCGCGAATTAGAG+TGG | - | chr4_4:76886780-76886799 | Msa0704410:intron | 50.0% | |
| ! | CAGATTGGTCAGGATGTGGA+AGG | - | chr4_4:76887023-76887042 | Msa0704410:CDS | 50.0% |
| AACACAACAGGAACCTTGCC+AGG | - | chr4_4:76887105-76887124 | Msa0704410:CDS | 50.0% | |
| ATTTCTCTGCGTGCATCTCC+TGG | + | chr4_4:76887126-76887145 | None:intergenic | 50.0% | |
| GAGCTTCCACATATGAGGTG+TGG | + | chr4_4:76887212-76887231 | None:intergenic | 50.0% | |
| TATGCCGTGATTGGTGTGCT+GGG | - | chr4_4:76887334-76887353 | Msa0704410:CDS | 50.0% | |
| GTTCTTCAGAGGGTAAAGCC+TGG | + | chr4_4:76887362-76887381 | None:intergenic | 50.0% | |
| GGTCAGTCGATCAAGAACCT+TGG | + | chr4_4:76887562-76887581 | None:intergenic | 50.0% | |
| CCTAAATCAGGTGGAGGTGG+AGG | + | chr4_4:76883911-76883930 | None:intergenic | 55.0% | |
| CCTCCACCTCCACCTGATTT+AGG | - | chr4_4:76883908-76883927 | Msa0704410:CDS | 55.0% | |
| GCACCTAAATCAGGTGGAGG+TGG | + | chr4_4:76883914-76883933 | None:intergenic | 55.0% | |
| TCACCACCAACAGTACCACC+TGG | + | chr4_4:76884127-76884146 | None:intergenic | 55.0% | |
| ! | AACGCGTCGTAGCGGTTTTG+CGG | - | chr4_4:76885256-76885275 | Msa0704410:intron | 55.0% |
| ATCCTCGTCCAGGATCCCTT+TGG | - | chr4_4:76886216-76886235 | Msa0704410:intron | 55.0% | |
| CAAGACCAGGGCAGTTGTGA+AGG | - | chr4_4:76886756-76886775 | Msa0704410:intron | 55.0% | |
| CAGATCCTTCACAACTGCCC+TGG | + | chr4_4:76886764-76886783 | None:intergenic | 55.0% | |
| ! | ATGGCTGGTGCAGATTGGTC+AGG | - | chr4_4:76887013-76887032 | Msa0704410:CDS | 55.0% |
| ! | GGTGCAGATTGGTCAGGATG+TGG | - | chr4_4:76887019-76887038 | Msa0704410:CDS | 55.0% |
| TTGCTCCTGGTACGTTCCCT+TGG | + | chr4_4:76887267-76887286 | None:intergenic | 55.0% | |
| ! | GGAGAACGGTCTTTTGCTCC+TGG | + | chr4_4:76887280-76887299 | None:intergenic | 55.0% |
| CTATGCCGTGATTGGTGTGC+TGG | - | chr4_4:76887333-76887352 | Msa0704410:CDS | 55.0% | |
| GGATCCCAGCACACCAATCA+CGG | + | chr4_4:76887341-76887360 | None:intergenic | 55.0% | |
| TGATTGGTGTGCTGGGATCC+AGG | - | chr4_4:76887341-76887360 | Msa0704410:CDS | 55.0% | |
| !! | GTGAGACAGTTGGAGGCACC+AGG | - | chr4_4:76884106-76884125 | Msa0704410:CDS | 60.0% |
| !! | AGACAGTTGGAGGCACCAGG+TGG | - | chr4_4:76884109-76884128 | Msa0704410:CDS | 60.0% |
| ! | GAGGCACCAGGTGGTACTGT+TGG | - | chr4_4:76884118-76884137 | Msa0704410:CDS | 60.0% |
| GCACCAGGTGGTACTGTTGG+TGG | - | chr4_4:76884121-76884140 | Msa0704410:CDS | 60.0% | |
| !! | GCGGCAACAAACGGGCTGAA+TGG | + | chr4_4:76884573-76884592 | None:intergenic | 60.0% |
| GGCCAATAGCGCCGCTATAG+CGG | - | chr4_4:76885170-76885189 | Msa0704410:intron | 60.0% | |
| !! | TGGCTTGTTGCGTAGCGCTC+CGG | + | chr4_4:76885211-76885230 | None:intergenic | 60.0% |
| CGGGATAGCGCATAGCGCTA+TGG | + | chr4_4:76885671-76885690 | None:intergenic | 60.0% | |
| AGCCAAAGGGATCCTGGACG+AGG | + | chr4_4:76886221-76886240 | None:intergenic | 60.0% | |
| TCTGCGTGCATCTCCTGGCA+AGG | + | chr4_4:76887121-76887140 | None:intergenic | 60.0% | |
| AGAGCTCGACGAGGGGAGAA+CGG | + | chr4_4:76887294-76887313 | None:intergenic | 60.0% | |
| GGCCGCTATAGCGGCGCTAT+TGG | + | chr4_4:76885175-76885194 | None:intergenic | 65.0% | |
| ! | TAGCGGATAGCGGCGCGTAG+CGG | + | chr4_4:76885715-76885734 | None:intergenic | 65.0% |
| GTTCTCCCCTCGTCGAGCTC+TGG | - | chr4_4:76887293-76887312 | Msa0704410:CDS | 65.0% | |
| TGGAGCCAGAGCTCGACGAG+GGG | + | chr4_4:76887301-76887320 | None:intergenic | 65.0% | |
| GTGGAGCCAGAGCTCGACGA+GGG | + | chr4_4:76887302-76887321 | None:intergenic | 65.0% | |
| AGCGGCGCAACGCGTCGTAG+CGG | - | chr4_4:76885248-76885267 | Msa0704410:intron | 70.0% | |
| GGTGGAGCCAGAGCTCGACG+AGG | + | chr4_4:76887303-76887322 | None:intergenic | 70.0% | |
| GCACCGCGCGGCCGCTATAG+CGG | + | chr4_4:76885184-76885203 | None:intergenic | 75.0% | |
| GCTATAGCGGCCGCGCGGTG+CGG | - | chr4_4:76885183-76885202 | Msa0704410:intron | 75.0% | |
| ! | GCGCCGCTATAGCGGCCGCG+CGG | - | chr4_4:76885178-76885197 | Msa0704410:intron | 80.0% |
| ! | CGCTCCGGCACCGCACCGCG+CGG | + | chr4_4:76885196-76885215 | None:intergenic | 85.0% |
| ! | GCGGCCGCGCGGTGCGGTGC+CGG | - | chr4_4:76885189-76885208 | Msa0704410:intron | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 76883476 | 76887779 | 76883476 | ID=Msa0704410;Name=Msa0704410 |
| chr4_4 | mRNA | 76883476 | 76887779 | 76883476 | ID=Msa0704410-mRNA-1;Parent=Msa0704410;Name=Msa0704410-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0.8|1|1|1|5|90|700 |
| chr4_4 | exon | 76883476 | 76884229 | 76883476 | ID=Msa0704410-mRNA-1:exon:24177;Parent=Msa0704410-mRNA-1 |
| chr4_4 | exon | 76884365 | 76884588 | 76884365 | ID=Msa0704410-mRNA-1:exon:24176;Parent=Msa0704410-mRNA-1 |
| chr4_4 | exon | 76884883 | 76885088 | 76884883 | ID=Msa0704410-mRNA-1:exon:24175;Parent=Msa0704410-mRNA-1 |
| chr4_4 | exon | 76886638 | 76886715 | 76886638 | ID=Msa0704410-mRNA-1:exon:24174;Parent=Msa0704410-mRNA-1 |
| chr4_4 | exon | 76886849 | 76887779 | 76886849 | ID=Msa0704410-mRNA-1:exon:24173;Parent=Msa0704410-mRNA-1 |
| chr4_4 | CDS | 76886849 | 76887779 | 76886849 | ID=Msa0704410-mRNA-1:cds;Parent=Msa0704410-mRNA-1 |
| chr4_4 | CDS | 76886638 | 76886715 | 76886638 | ID=Msa0704410-mRNA-1:cds;Parent=Msa0704410-mRNA-1 |
| chr4_4 | CDS | 76884883 | 76885088 | 76884883 | ID=Msa0704410-mRNA-1:cds;Parent=Msa0704410-mRNA-1 |
| chr4_4 | CDS | 76884365 | 76884588 | 76884365 | ID=Msa0704410-mRNA-1:cds;Parent=Msa0704410-mRNA-1 |
| chr4_4 | CDS | 76883566 | 76884229 | 76883566 | ID=Msa0704410-mRNA-1:cds;Parent=Msa0704410-mRNA-1 |
| chr4_4 | three_prime_UTR | 76883476 | 76883565 | 76883476 | ID=Msa0704410-mRNA-1:three_prime_utr;Parent=Msa0704410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
