Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1466920 | PNX76945.1 | 100.000 | 66 | 0 | 0 | 1 | 66 | 1 | 66 | 8.43e-37 | 129 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1466920 | sp|O65759|H2AX_CICAR | 96.970 | 66 | 2 | 0 | 1 | 66 | 1 | 66 | 2.52e-38 | 126 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1466920 | A0A2K3LEH4 | 100.000 | 66 | 0 | 0 | 1 | 66 | 1 | 66 | 4.03e-37 | 129 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa1466920 | 0.806739 | 7.107709e-50 | -8.615850e-47 |
| Msa0001450 | Msa1466920 | 0.805662 | 1.197906e-49 | -8.615850e-47 |
| Msa0001940 | Msa1466920 | 0.810466 | 1.136460e-50 | -8.615850e-47 |
| Msa0003890 | Msa1466920 | 0.811817 | 5.789724e-51 | -8.615850e-47 |
| Msa0005890 | Msa1466920 | 0.827214 | 1.770596e-54 | -8.615850e-47 |
| Msa0006110 | Msa1466920 | 0.816411 | 5.607248e-52 | -8.615850e-47 |
| Msa0008670 | Msa1466920 | 0.802154 | 6.417651e-49 | -8.615850e-47 |
| Msa0014990 | Msa1466920 | 0.819152 | 1.349447e-52 | -8.615850e-47 |
| Msa0017510 | Msa1466920 | 0.830714 | 2.513398e-55 | -8.615850e-47 |
| Msa0022550 | Msa1466920 | 0.806347 | 8.599390e-50 | -8.615850e-47 |
| Msa0024550 | Msa1466920 | 0.800457 | 1.428428e-48 | -8.615850e-47 |
| Msa0028420 | Msa1466920 | 0.862181 | 6.076792e-64 | -8.615850e-47 |
| Msa0034810 | Msa1466920 | 0.814840 | 1.255089e-51 | -8.615850e-47 |
| Msa0036870 | Msa1466920 | 0.806253 | 8.996781e-50 | -8.615850e-47 |
| Msa0042610 | Msa1466920 | 0.825721 | 4.017338e-54 | -8.615850e-47 |
| Msa0047030 | Msa1466920 | 0.820153 | 7.971403e-53 | -8.615850e-47 |
| Msa0051630 | Msa1466920 | 0.801566 | 8.475333e-49 | -8.615850e-47 |
| Msa0054480 | Msa1466920 | 0.808493 | 3.013911e-50 | -8.615850e-47 |
| Msa0061340 | Msa1466920 | 0.805148 | 1.535341e-49 | -8.615850e-47 |
| Msa0074240 | Msa1466920 | 0.804105 | 2.533837e-49 | -8.615850e-47 |
| Msa0076250 | Msa1466920 | 0.840141 | 1.039587e-57 | -8.615850e-47 |
| Msa0089630 | Msa1466920 | 0.835074 | 2.073366e-56 | -8.615850e-47 |
| Msa0090400 | Msa1466920 | 0.807772 | 4.293120e-50 | -8.615850e-47 |
| Msa0092790 | Msa1466920 | 0.843275 | 1.549183e-58 | -8.615850e-47 |
| Msa0097770 | Msa1466920 | 0.819474 | 1.139581e-52 | -8.615850e-47 |
| Msa0115560 | Msa1466920 | 0.807646 | 4.566819e-50 | -8.615850e-47 |
| Msa1346280 | Msa1466920 | 0.834617 | 2.703035e-56 | -8.615850e-47 |
| Msa1346370 | Msa1466920 | 0.814849 | 1.249493e-51 | -8.615850e-47 |
| Msa1353060 | Msa1466920 | 0.807531 | 4.830828e-50 | -8.615850e-47 |
| Msa1353980 | Msa1466920 | 0.820875 | 5.444359e-53 | -8.615850e-47 |
| Msa1361400 | Msa1466920 | 0.842689 | 2.218582e-58 | -8.615850e-47 |
| Msa1361410 | Msa1466920 | 0.852704 | 3.875530e-61 | -8.615850e-47 |
| Msa1369150 | Msa1466920 | 0.800788 | 1.222826e-48 | -8.615850e-47 |
| Msa1372230 | Msa1466920 | 0.805953 | 1.040876e-49 | -8.615850e-47 |
| Msa1373100 | Msa1466920 | 0.861340 | 1.099302e-63 | -8.615850e-47 |
| Msa1374550 | Msa1466920 | 0.830325 | 3.128852e-55 | -8.615850e-47 |
| Msa1378490 | Msa1466920 | 0.803657 | 3.139645e-49 | -8.615850e-47 |
| Msa1391770 | Msa1466920 | 0.820497 | 6.648879e-53 | -8.615850e-47 |
| Msa1392880 | Msa1466920 | 0.805181 | 1.511225e-49 | -8.615850e-47 |
| Msa1402400 | Msa1466920 | 0.829908 | 3.956076e-55 | -8.615850e-47 |
| Msa1422950 | Msa1466920 | 0.861237 | 1.181015e-63 | -8.615850e-47 |
| Msa1423350 | Msa1466920 | 0.809324 | 2.001701e-50 | -8.615850e-47 |
| Msa1425880 | Msa1466920 | 0.816124 | 6.499484e-52 | -8.615850e-47 |
| Msa1440310 | Msa1466920 | 0.802655 | 5.060304e-49 | -8.615850e-47 |
| Msa1440880 | Msa1466920 | 0.842561 | 2.398818e-58 | -8.615850e-47 |
| Msa1446810 | Msa1466920 | 0.828856 | 7.125757e-55 | -8.615850e-47 |
| Msa1446820 | Msa1466920 | 0.874019 | 9.361896e-68 | -8.615850e-47 |
| Msa1451160 | Msa1466920 | 0.877208 | 7.553704e-69 | -8.615850e-47 |
| Msa1457910 | Msa1466920 | 0.815553 | 8.715484e-52 | -8.615850e-47 |
| Msa1466540 | Msa1466920 | 0.829700 | 4.444469e-55 | -8.615850e-47 |
| Msa0607050 | Msa1466920 | 0.807186 | 5.715416e-50 | -8.615850e-47 |
| Msa0615710 | Msa1466920 | 0.804170 | 2.456361e-49 | -8.615850e-47 |
| Msa0620230 | Msa1466920 | 0.804334 | 2.270359e-49 | -8.615850e-47 |
| Msa0625720 | Msa1466920 | 0.837273 | 5.727281e-57 | -8.615850e-47 |
| Msa0627450 | Msa1466920 | 0.818396 | 2.003070e-52 | -8.615850e-47 |
| Msa0637560 | Msa1466920 | 0.800132 | 1.663809e-48 | -8.615850e-47 |
| Msa0639430 | Msa1466920 | 0.815379 | 9.530165e-52 | -8.615850e-47 |
| Msa0643080 | Msa1466920 | 0.813322 | 2.714104e-51 | -8.615850e-47 |
| Msa0658880 | Msa1466920 | 0.817550 | 3.110882e-52 | -8.615850e-47 |
| Msa0663390 | Msa1466920 | 0.816443 | 5.516711e-52 | -8.615850e-47 |
| Msa0677410 | Msa1466920 | 0.846079 | 2.719919e-59 | -8.615850e-47 |
| Msa0682330 | Msa1466920 | 0.839781 | 1.290013e-57 | -8.615850e-47 |
| Msa0683510 | Msa1466920 | 0.819415 | 1.175515e-52 | -8.615850e-47 |
| Msa0690150 | Msa1466920 | 0.808562 | 2.913985e-50 | -8.615850e-47 |
| Msa0704410 | Msa1466920 | 0.810558 | 1.086027e-50 | -8.615850e-47 |
| Msa0717890 | Msa1466920 | 0.816436 | 5.534702e-52 | -8.615850e-47 |
| Msa0731940 | Msa1466920 | 0.809662 | 1.693708e-50 | -8.615850e-47 |
| Msa0739730 | Msa1466920 | 0.811206 | 7.862837e-51 | -8.615850e-47 |
| Msa0741240 | Msa1466920 | 0.811924 | 5.487287e-51 | -8.615850e-47 |
| Msa0750880 | Msa1466920 | 0.813863 | 2.063812e-51 | -8.615850e-47 |
| Msa0756540 | Msa1466920 | 0.811062 | 8.448008e-51 | -8.615850e-47 |
| Msa0795870 | Msa1466920 | 0.842778 | 2.100377e-58 | -8.615850e-47 |
| Msa0797930 | Msa1466920 | 0.848564 | 5.654505e-60 | -8.615850e-47 |
| Msa0828560 | Msa1466920 | 0.821450 | 4.010880e-53 | -8.615850e-47 |
| Msa0832340 | Msa1466920 | 0.805870 | 1.083434e-49 | -8.615850e-47 |
| Msa0833650 | Msa1466920 | 0.839755 | 1.310677e-57 | -8.615850e-47 |
| Msa0835960 | Msa1466920 | 0.866545 | 2.636493e-65 | -8.615850e-47 |
| Msa0123300 | Msa1466920 | 0.805054 | 1.606080e-49 | -8.615850e-47 |
| Msa0124060 | Msa1466920 | 0.855915 | 4.577934e-62 | -8.615850e-47 |
| Msa0124280 | Msa1466920 | 0.842353 | 2.724327e-58 | -8.615850e-47 |
| Msa0129940 | Msa1466920 | 0.815537 | 8.786077e-52 | -8.615850e-47 |
| Msa0137450 | Msa1466920 | 0.806493 | 8.007525e-50 | -8.615850e-47 |
| Msa0145580 | Msa1466920 | 0.800072 | 1.711148e-48 | -8.615850e-47 |
| Msa0152400 | Msa1466920 | 0.821479 | 3.951434e-53 | -8.615850e-47 |
| Msa0157290 | Msa1466920 | 0.831576 | 1.543263e-55 | -8.615850e-47 |
| Msa0168500 | Msa1466920 | 0.855542 | 5.881667e-62 | -8.615850e-47 |
| Msa0175730 | Msa1466920 | 0.803268 | 3.779949e-49 | -8.615850e-47 |
| Msa0175780 | Msa1466920 | 0.813122 | 3.002684e-51 | -8.615850e-47 |
| Msa0189290 | Msa1466920 | 0.806115 | 9.619137e-50 | -8.615850e-47 |
| Msa0197420 | Msa1466920 | 0.817283 | 3.574264e-52 | -8.615850e-47 |
| Msa0197930 | Msa1466920 | 0.813800 | 2.130588e-51 | -8.615850e-47 |
| Msa0211150 | Msa1466920 | 0.819014 | 1.450713e-52 | -8.615850e-47 |
| Msa0221290 | Msa1466920 | 0.803544 | 3.314304e-49 | -8.615850e-47 |
| Msa0222620 | Msa1466920 | 0.811773 | 5.919549e-51 | -8.615850e-47 |
| Msa0223080 | Msa1466920 | 0.875462 | 3.023376e-68 | -8.615850e-47 |
| Msa0225100 | Msa1466920 | 0.819141 | 1.357496e-52 | -8.615850e-47 |
| Msa0225860 | Msa1466920 | 0.828759 | 7.521459e-55 | -8.615850e-47 |
| Msa0231650 | Msa1466920 | 0.811442 | 6.987236e-51 | -8.615850e-47 |
| Msa1228200 | Msa1466920 | 0.821762 | 3.397764e-53 | -8.615850e-47 |
| Msa1229500 | Msa1466920 | 0.805906 | 1.064501e-49 | -8.615850e-47 |
| Msa1231820 | Msa1466920 | 0.800490 | 1.406272e-48 | -8.615850e-47 |
| Msa1239920 | Msa1466920 | 0.833467 | 5.245595e-56 | -8.615850e-47 |
| Msa1243490 | Msa1466920 | 0.802927 | 4.446630e-49 | -8.615850e-47 |
| Msa1251160 | Msa1466920 | 0.836695 | 8.046228e-57 | -8.615850e-47 |
| Msa1269480 | Msa1466920 | 0.800036 | 1.739709e-48 | -8.615850e-47 |
| Msa1271990 | Msa1466920 | 0.808421 | 3.123577e-50 | -8.615850e-47 |
| Msa1274520 | Msa1466920 | 0.818377 | 2.023385e-52 | -8.615850e-47 |
| Msa1276660 | Msa1466920 | 0.832672 | 8.269669e-56 | -8.615850e-47 |
| Msa1284550 | Msa1466920 | 0.805700 | 1.175950e-49 | -8.615850e-47 |
| Msa1298370 | Msa1466920 | 0.808402 | 3.152306e-50 | -8.615850e-47 |
| Msa1303240 | Msa1466920 | 0.842979 | 1.857610e-58 | -8.615850e-47 |
| Msa1303250 | Msa1466920 | 0.854093 | 1.548485e-61 | -8.615850e-47 |
| Msa1306910 | Msa1466920 | 0.806553 | 7.780351e-50 | -8.615850e-47 |
| Msa1320410 | Msa1466920 | 0.812956 | 3.264886e-51 | -8.615850e-47 |
| Msa1328640 | Msa1466920 | 0.804003 | 2.660619e-49 | -8.615850e-47 |
| Msa1328710 | Msa1466920 | 0.841728 | 3.984294e-58 | -8.615850e-47 |
| Msa1333480 | Msa1466920 | 0.818094 | 2.345077e-52 | -8.615850e-47 |
| Msa1342900 | Msa1466920 | 0.819980 | 8.732808e-53 | -8.615850e-47 |
| Msa0371030 | Msa1466920 | 0.822017 | 2.966833e-53 | -8.615850e-47 |
| Msa0371170 | Msa1466920 | 0.816228 | 6.163035e-52 | -8.615850e-47 |
| Msa0376350 | Msa1466920 | 0.816555 | 5.205969e-52 | -8.615850e-47 |
| Msa0378720 | Msa1466920 | 0.828089 | 1.091189e-54 | -8.615850e-47 |
| Msa0392420 | Msa1466920 | 0.806679 | 7.315495e-50 | -8.615850e-47 |
| Msa0392460 | Msa1466920 | 0.801426 | 9.054563e-49 | -8.615850e-47 |
| Msa0392490 | Msa1466920 | 0.817146 | 3.836247e-52 | -8.615850e-47 |
| Msa0392510 | Msa1466920 | 0.807152 | 5.811911e-50 | -8.615850e-47 |
| Msa0403970 | Msa1466920 | 0.824567 | 7.526045e-54 | -8.615850e-47 |
| Msa0406770 | Msa1466920 | 0.812730 | 3.660655e-51 | -8.615850e-47 |
| Msa0417880 | Msa1466920 | 0.800255 | 1.570456e-48 | -8.615850e-47 |
| Msa0424790 | Msa1466920 | 0.806792 | 6.926865e-50 | -8.615850e-47 |
| Msa0428080 | Msa1466920 | 0.808644 | 2.799163e-50 | -8.615850e-47 |
| Msa0428580 | Msa1466920 | 0.809682 | 1.676873e-50 | -8.615850e-47 |
| Msa0428920 | Msa1466920 | 0.806310 | 8.752038e-50 | -8.615850e-47 |
| Msa0440500 | Msa1466920 | 0.802931 | 4.439510e-49 | -8.615850e-47 |
| Msa0443310 | Msa1466920 | 0.811076 | 8.389493e-51 | -8.615850e-47 |
| Msa0452710 | Msa1466920 | 0.801987 | 6.946985e-49 | -8.615850e-47 |
| Msa0463060 | Msa1466920 | 0.805126 | 1.551315e-49 | -8.615850e-47 |
| Msa0464680 | Msa1466920 | 0.805927 | 1.053620e-49 | -8.615850e-47 |
| Msa0467490 | Msa1466920 | 0.801273 | 9.733287e-49 | -8.615850e-47 |
| Msa0474730 | Msa1466920 | 0.805800 | 1.120693e-49 | -8.615850e-47 |
| Msa0475790 | Msa1466920 | 0.805596 | 1.236698e-49 | -8.615850e-47 |
| Msa0479170 | Msa1466920 | 0.808170 | 3.532601e-50 | -8.615850e-47 |
| Msa0481530 | Msa1466920 | 0.822880 | 1.869748e-53 | -8.615850e-47 |
| Msa1002000 | Msa1466920 | 0.800320 | 1.523116e-48 | -8.615850e-47 |
| Msa1004840 | Msa1466920 | 0.801738 | 7.814686e-49 | -8.615850e-47 |
| Msa1010390 | Msa1466920 | 0.800040 | 1.736626e-48 | -8.615850e-47 |
| Msa1014370 | Msa1466920 | 0.802857 | 4.596725e-49 | -8.615850e-47 |
| Msa1019000 | Msa1466920 | 0.811091 | 8.326392e-51 | -8.615850e-47 |
| Msa1019430 | Msa1466920 | 0.832488 | 9.189417e-56 | -8.615850e-47 |
| Msa1019470 | Msa1466920 | 0.837632 | 4.634489e-57 | -8.615850e-47 |
| Msa1041670 | Msa1466920 | 0.834943 | 2.237815e-56 | -8.615850e-47 |
| Msa1065390 | Msa1466920 | 0.806648 | 7.429480e-50 | -8.615850e-47 |
| Msa1075540 | Msa1466920 | 0.800571 | 1.354030e-48 | -8.615850e-47 |
| Msa1078170 | Msa1466920 | 0.858900 | 5.994238e-63 | -8.615850e-47 |
| Msa1079590 | Msa1466920 | 0.832519 | 9.023781e-56 | -8.615850e-47 |
| Msa1081330 | Msa1466920 | 0.806186 | 9.293716e-50 | -8.615850e-47 |
| Msa1084960 | Msa1466920 | 0.825152 | 5.476162e-54 | -8.615850e-47 |
| Msa1085260 | Msa1466920 | 0.840833 | 6.851838e-58 | -8.615850e-47 |
| Msa1093840 | Msa1466920 | 0.822856 | 1.893978e-53 | -8.615850e-47 |
| Msa1098400 | Msa1466920 | 0.804324 | 2.281979e-49 | -8.615850e-47 |
| Msa1100050 | Msa1466920 | 0.823405 | 1.409750e-53 | -8.615850e-47 |
| Msa1101090 | Msa1466920 | 0.828902 | 6.942815e-55 | -8.615850e-47 |
| Msa1103990 | Msa1466920 | 0.845454 | 4.019970e-59 | -8.615850e-47 |
| Msa0239190 | Msa1466920 | 0.807498 | 4.908975e-50 | -8.615850e-47 |
| Msa0239570 | Msa1466920 | 0.805180 | 1.511794e-49 | -8.615850e-47 |
| Msa0243100 | Msa1466920 | 0.819859 | 9.309189e-53 | -8.615850e-47 |
| Msa0244640 | Msa1466920 | 0.801718 | 7.888323e-49 | -8.615850e-47 |
| Msa0254790 | Msa1466920 | 0.842933 | 1.910587e-58 | -8.615850e-47 |
| Msa0261340 | Msa1466920 | 0.807756 | 4.327516e-50 | -8.615850e-47 |
| Msa0264150 | Msa1466920 | 0.827508 | 1.505033e-54 | -8.615850e-47 |
| Msa0266180 | Msa1466920 | 0.817696 | 2.884750e-52 | -8.615850e-47 |
| Msa0267110 | Msa1466920 | 0.812559 | 3.989059e-51 | -8.615850e-47 |
| Msa0277180 | Msa1466920 | 0.826693 | 2.358268e-54 | -8.615850e-47 |
| Msa0287650 | Msa1466920 | 0.822222 | 2.659374e-53 | -8.615850e-47 |
| Msa0287740 | Msa1466920 | 0.827723 | 1.336639e-54 | -8.615850e-47 |
| Msa0298470 | Msa1466920 | 0.805948 | 1.042985e-49 | -8.615850e-47 |
| Msa0300270 | Msa1466920 | 0.825845 | 3.753631e-54 | -8.615850e-47 |
| Msa0300320 | Msa1466920 | 0.814485 | 1.504558e-51 | -8.615850e-47 |
| Msa0302160 | Msa1466920 | 0.873098 | 1.912334e-67 | -8.615850e-47 |
| Msa0302170 | Msa1466920 | 0.817551 | 3.109886e-52 | -8.615850e-47 |
| Msa0316810 | Msa1466920 | 0.836387 | 9.638887e-57 | -8.615850e-47 |
| Msa0317280 | Msa1466920 | 0.812808 | 3.518424e-51 | -8.615850e-47 |
| Msa0317510 | Msa1466920 | 0.806406 | 8.352915e-50 | -8.615850e-47 |
| Msa0318700 | Msa1466920 | 0.806080 | 9.784279e-50 | -8.615850e-47 |
| Msa0337700 | Msa1466920 | 0.821866 | 3.214756e-53 | -8.615850e-47 |
| Msa0339250 | Msa1466920 | 0.808606 | 2.851831e-50 | -8.615850e-47 |
| Msa0339490 | Msa1466920 | 0.875144 | 3.884491e-68 | -8.615850e-47 |
| Msa0339500 | Msa1466920 | 0.851089 | 1.113626e-60 | -8.615850e-47 |
| Msa0344570 | Msa1466920 | 0.801509 | 8.706439e-49 | -8.615850e-47 |
| Msa0344930 | Msa1466920 | 0.801830 | 7.481331e-49 | -8.615850e-47 |
| Msa0348090 | Msa1466920 | 0.811947 | 5.425574e-51 | -8.615850e-47 |
| Msa0348880 | Msa1466920 | 0.805014 | 1.637376e-49 | -8.615850e-47 |
| Msa0360210 | Msa1466920 | 0.815323 | 9.803840e-52 | -8.615850e-47 |
| Msa0363400 | Msa1466920 | 0.803060 | 4.175148e-49 | -8.615850e-47 |
| Msa1111090 | Msa1466920 | 0.809534 | 1.804086e-50 | -8.615850e-47 |
| Msa1123380 | Msa1466920 | 0.853038 | 3.111076e-61 | -8.615850e-47 |
| Msa1128600 | Msa1466920 | 0.821721 | 3.472937e-53 | -8.615850e-47 |
| Msa1132840 | Msa1466920 | 0.846294 | 2.377790e-59 | -8.615850e-47 |
| Msa1135470 | Msa1466920 | 0.824010 | 1.017239e-53 | -8.615850e-47 |
| Msa1142020 | Msa1466920 | 0.809963 | 1.459328e-50 | -8.615850e-47 |
| Msa1155170 | Msa1466920 | -0.809316 | 2.009849e-50 | -8.615850e-47 |
| Msa1157870 | Msa1466920 | 0.814190 | 1.747749e-51 | -8.615850e-47 |
| Msa1166560 | Msa1466920 | 0.830993 | 2.147123e-55 | -8.615850e-47 |
| Msa1168160 | Msa1466920 | 0.817887 | 2.611731e-52 | -8.615850e-47 |
| Msa1177320 | Msa1466920 | 0.836202 | 1.074151e-56 | -8.615850e-47 |
| Msa1189070 | Msa1466920 | 0.816348 | 5.792608e-52 | -8.615850e-47 |
| Msa1190920 | Msa1466920 | 0.815210 | 1.039124e-51 | -8.615850e-47 |
| Msa1193290 | Msa1466920 | 0.842597 | 2.346861e-58 | -8.615850e-47 |
| Msa1199570 | Msa1466920 | 0.836773 | 7.687244e-57 | -8.615850e-47 |
| Msa1208430 | Msa1466920 | 0.813395 | 2.615668e-51 | -8.615850e-47 |
| Msa1209460 | Msa1466920 | 0.834337 | 3.176511e-56 | -8.615850e-47 |
| Msa1219010 | Msa1466920 | 0.831181 | 1.930313e-55 | -8.615850e-47 |
| Msa1221060 | Msa1466920 | 0.855603 | 5.646964e-62 | -8.615850e-47 |
| Msa0487570 | Msa1466920 | 0.806834 | 6.784565e-50 | -8.615850e-47 |
| Msa0487630 | Msa1466920 | 0.821281 | 4.388524e-53 | -8.615850e-47 |
| Msa0495320 | Msa1466920 | 0.813990 | 1.934603e-51 | -8.615850e-47 |
| Msa0504210 | Msa1466920 | 0.815583 | 8.584629e-52 | -8.615850e-47 |
| Msa0516170 | Msa1466920 | 0.813615 | 2.339908e-51 | -8.615850e-47 |
| Msa0523460 | Msa1466920 | 0.802471 | 5.522647e-49 | -8.615850e-47 |
| Msa0527550 | Msa1466920 | 0.802261 | 6.100742e-49 | -8.615850e-47 |
| Msa0529890 | Msa1466920 | 0.838964 | 2.102985e-57 | -8.615850e-47 |
| Msa0531180 | Msa1466920 | 0.827307 | 1.682146e-54 | -8.615850e-47 |
| Msa0535040 | Msa1466920 | 0.814601 | 1.417773e-51 | -8.615850e-47 |
| Msa0545340 | Msa1466920 | 0.819378 | 1.198738e-52 | -8.615850e-47 |
| Msa0546680 | Msa1466920 | 0.818894 | 1.544667e-52 | -8.615850e-47 |
| Msa0547230 | Msa1466920 | 0.804811 | 1.805631e-49 | -8.615850e-47 |
| Msa0547720 | Msa1466920 | 0.820105 | 8.178826e-53 | -8.615850e-47 |
| Msa0551890 | Msa1466920 | 0.809857 | 1.537889e-50 | -8.615850e-47 |
| Msa0569200 | Msa1466920 | 0.843417 | 1.419511e-58 | -8.615850e-47 |
| Msa0571130 | Msa1466920 | 0.815157 | 1.067713e-51 | -8.615850e-47 |
| Msa0580370 | Msa1466920 | 0.842605 | 2.334861e-58 | -8.615850e-47 |
| Msa0583830 | Msa1466920 | 0.810244 | 1.269546e-50 | -8.615850e-47 |
| Msa0585560 | Msa1466920 | 0.827368 | 1.625649e-54 | -8.615850e-47 |
| Msa0591790 | Msa1466920 | 0.802371 | 5.790360e-49 | -8.615850e-47 |
| Msa0597790 | Msa1466920 | 0.823698 | 1.203941e-53 | -8.615850e-47 |
| Msa0844570 | Msa1466920 | 0.807637 | 4.586538e-50 | -8.615850e-47 |
| Msa0861510 | Msa1466920 | 0.811067 | 8.426732e-51 | -8.615850e-47 |
| Msa0861600 | Msa1466920 | 0.824141 | 9.481520e-54 | -8.615850e-47 |
| Msa0861850 | Msa1466920 | 0.813335 | 2.696440e-51 | -8.615850e-47 |
| Msa0861870 | Msa1466920 | 0.816511 | 5.326671e-52 | -8.615850e-47 |
| Msa0876190 | Msa1466920 | 0.800332 | 1.514802e-48 | -8.615850e-47 |
| Msa0876550 | Msa1466920 | 0.850007 | 2.242279e-60 | -8.615850e-47 |
| Msa0876560 | Msa1466920 | 0.824219 | 9.085608e-54 | -8.615850e-47 |
| Msa0880140 | Msa1466920 | 0.827571 | 1.453703e-54 | -8.615850e-47 |
| Msa0893950 | Msa1466920 | 0.813621 | 2.332698e-51 | -8.615850e-47 |
| Msa0896540 | Msa1466920 | 0.825596 | 4.300267e-54 | -8.615850e-47 |
| Msa0903070 | Msa1466920 | 0.813194 | 2.895074e-51 | -8.615850e-47 |
| Msa0909770 | Msa1466920 | 0.801253 | 9.825135e-49 | -8.615850e-47 |
| Msa0923030 | Msa1466920 | 0.801644 | 8.169496e-49 | -8.615850e-47 |
| Msa0941190 | Msa1466920 | 0.820752 | 5.809195e-53 | -8.615850e-47 |
| Msa0945110 | Msa1466920 | 0.811975 | 5.348979e-51 | -8.615850e-47 |
| Msa0961690 | Msa1466920 | 0.813267 | 2.790274e-51 | -8.615850e-47 |
| Msa0963270 | Msa1466920 | 0.804274 | 2.337345e-49 | -8.615850e-47 |
| Msa0964840 | Msa1466920 | 0.801396 | 9.182144e-49 | -8.615850e-47 |
| Msa0967380 | Msa1466920 | 0.826185 | 3.116568e-54 | -8.615850e-47 |
| Msa0967870 | Msa1466920 | 0.812924 | 3.318550e-51 | -8.615850e-47 |
| Msa0969200 | Msa1466920 | 0.829232 | 5.775936e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1466920 | MtrunA17_Chr7g0273351 | 100.000 | 66 | 0 | 0 | 1 | 66 | 1 | 66 | 1.11e-40 | 129 |
| Msa1466920 | MtrunA17_Chr7g0273331 | 100.000 | 66 | 0 | 0 | 1 | 66 | 57 | 122 | 7.77e-40 | 129 |
| Msa1466920 | MtrunA17_Chr7g0268831 | 92.754 | 69 | 2 | 1 | 1 | 66 | 1 | 69 | 3.59e-37 | 120 |
| Msa1466920 | MtrunA17_Chr7g0273341 | 95.082 | 61 | 3 | 0 | 6 | 66 | 45 | 105 | 4.59e-35 | 116 |
| Msa1466920 | MtrunA17_Chr7g0259151 | 83.607 | 61 | 10 | 0 | 6 | 66 | 9 | 69 | 2.37e-31 | 105 |
| Msa1466920 | MtrunA17_Chr2g0319191 | 83.607 | 61 | 6 | 1 | 10 | 66 | 3 | 63 | 2.49e-27 | 95.5 |
| Msa1466920 | MtrunA17_Chr2g0319181 | 82.540 | 63 | 3 | 2 | 10 | 66 | 3 | 63 | 7.64e-27 | 94.4 |
| Msa1466920 | MtrunA17_Chr7g0272611 | 72.414 | 58 | 16 | 0 | 9 | 66 | 16 | 73 | 5.50e-24 | 87.4 |
| Msa1466920 | MtrunA17_Chr2g0327951 | 79.592 | 49 | 10 | 0 | 18 | 66 | 58 | 106 | 1.05e-22 | 85.1 |
| Msa1466920 | MtrunA17_Chr4g0031041 | 79.592 | 49 | 10 | 0 | 18 | 66 | 17 | 65 | 2.35e-22 | 83.2 |
| Msa1466920 | MtrunA17_Chr4g0031001 | 79.167 | 48 | 10 | 0 | 19 | 66 | 24 | 71 | 8.65e-22 | 82.0 |
| Msa1466920 | MtrunA17_Chr4g0031651 | 79.167 | 48 | 10 | 0 | 19 | 66 | 24 | 71 | 8.74e-22 | 82.0 |
| Msa1466920 | MtrunA17_Chr4g0035621 | 79.167 | 48 | 10 | 0 | 19 | 66 | 24 | 71 | 8.93e-22 | 82.0 |
| Msa1466920 | MtrunA17_Chr4g0032301 | 79.167 | 48 | 10 | 0 | 19 | 66 | 24 | 71 | 1.20e-21 | 81.6 |
| Msa1466920 | MtrunA17_Chr2g0327931 | 79.167 | 48 | 10 | 0 | 19 | 66 | 23 | 70 | 1.20e-21 | 81.6 |
| Msa1466920 | MtrunA17_Chr8g0379311 | 79.167 | 48 | 10 | 0 | 19 | 66 | 24 | 71 | 1.31e-21 | 81.6 |
| Msa1466920 | MtrunA17_Chr6g0449661 | 67.442 | 43 | 14 | 0 | 19 | 61 | 85 | 127 | 7.77e-17 | 70.5 |
| Msa1466920 | MtrunA17_Chr3g0119971 | 69.048 | 42 | 13 | 0 | 20 | 61 | 81 | 122 | 8.18e-17 | 70.1 |
| Msa1466920 | MtrunA17_Chr1g0148961 | 55.385 | 65 | 28 | 1 | 3 | 66 | 10 | 74 | 1.55e-14 | 62.8 |
| Msa1466920 | MtrunA17_Chr1g0148951 | 55.385 | 65 | 28 | 1 | 3 | 66 | 10 | 74 | 1.55e-14 | 62.8 |
| Msa1466920 | MtrunA17_Chr1g0211651 | 55.932 | 59 | 24 | 2 | 10 | 66 | 13 | 71 | 6.32e-13 | 58.9 |
| Msa1466920 | MtrunA17_Chr1g0184901 | 65.957 | 47 | 15 | 1 | 21 | 66 | 28 | 74 | 1.12e-12 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1466920 | AT1G54690.1 | 92.754 | 69 | 2 | 1 | 1 | 66 | 1 | 69 | 2.80e-37 | 121 |
| Msa1466920 | AT1G08880.1 | 95.238 | 63 | 3 | 0 | 4 | 66 | 7 | 69 | 7.92e-37 | 120 |
| Msa1466920 | AT4G27230.2 | 85.246 | 61 | 5 | 1 | 10 | 66 | 3 | 63 | 1.68e-27 | 96.3 |
| Msa1466920 | AT4G27230.1 | 85.246 | 61 | 5 | 1 | 10 | 66 | 3 | 63 | 1.68e-27 | 96.3 |
| Msa1466920 | AT5G54640.1 | 78.788 | 66 | 11 | 1 | 1 | 66 | 1 | 63 | 4.47e-27 | 95.1 |
| Msa1466920 | AT1G51060.1 | 80.328 | 61 | 8 | 1 | 10 | 66 | 3 | 63 | 4.73e-26 | 92.4 |
| Msa1466920 | AT3G20670.1 | 81.967 | 61 | 7 | 1 | 10 | 66 | 3 | 63 | 9.72e-26 | 91.7 |
| Msa1466920 | AT5G59870.1 | 69.014 | 71 | 17 | 2 | 1 | 66 | 1 | 71 | 1.12e-24 | 89.7 |
| Msa1466920 | AT5G27670.1 | 68.571 | 70 | 17 | 1 | 2 | 66 | 3 | 72 | 1.08e-22 | 84.7 |
| Msa1466920 | AT5G02560.1 | 77.551 | 49 | 11 | 0 | 18 | 66 | 23 | 71 | 2.06e-21 | 81.3 |
| Msa1466920 | AT5G02560.2 | 77.551 | 49 | 11 | 0 | 18 | 66 | 23 | 71 | 4.43e-21 | 81.3 |
| Msa1466920 | AT2G38810.1 | 64.000 | 50 | 17 | 1 | 18 | 66 | 27 | 76 | 2.11e-13 | 60.5 |
| Msa1466920 | AT2G38810.4 | 64.000 | 50 | 17 | 1 | 18 | 66 | 27 | 76 | 2.11e-13 | 60.5 |
| Msa1466920 | AT2G38810.3 | 64.000 | 50 | 17 | 1 | 18 | 66 | 27 | 76 | 2.11e-13 | 60.5 |
| Msa1466920 | AT2G38810.2 | 64.000 | 50 | 17 | 1 | 18 | 66 | 27 | 76 | 2.11e-13 | 60.5 |
| Msa1466920 | AT1G52740.1 | 62.500 | 48 | 17 | 1 | 20 | 66 | 27 | 74 | 4.13e-13 | 59.7 |
| Msa1466920 | AT3G54560.1 | 60.417 | 48 | 18 | 1 | 20 | 66 | 29 | 76 | 1.29e-11 | 55.8 |
| Msa1466920 | AT3G54560.2 | 60.417 | 48 | 18 | 1 | 20 | 66 | 29 | 76 | 1.29e-11 | 55.8 |
Find 29 sgRNAs with CRISPR-Local
Find 27 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAACTGATTTGGCAGCCTT+TGG | 0.309618 | tig0049272:+168 | Msa1466920:intergenic |
| TGAAGATCTTGAAACTGATT+TGG | 0.311823 | tig0049272:+158 | Msa1466920:intergenic |
| AACACGTTCGGCGTATTTAC+CGG | 0.321195 | tig0049272:+86 | Msa1466920:intergenic |
| GAGTTCCACTGGCACAACTA+AGG | 0.456467 | tig0049272:-205 | Msa1466920:CDS |
| AGGACGGCGGAGAGGTAGAC+AGG | 0.463287 | tig0049272:+51 | Msa1466920:intergenic |
| AGCACCGGCACCAACACGTT+CGG | 0.480590 | tig0049272:+74 | Msa1466920:intergenic |
| GTTTCAAGATCTTCAAAGGC+AGG | 0.496108 | tig0049272:-150 | Msa1466920:CDS |
| CTGGCACAACTAAGGGCGGA+AGG | 0.502885 | tig0049272:-197 | Msa1466920:CDS |
| ATCAGTTTCAAGATCTTCAA+AGG | 0.503488 | tig0049272:-154 | Msa1466920:CDS |
| GGCACAACTAAGGGCGGAAG+GGG | 0.525782 | tig0049272:-195 | Msa1466920:CDS |
| TGGCACAACTAAGGGCGGAA+GGG | 0.543224 | tig0049272:-196 | Msa1466920:CDS |
| AGTTCCACTGGCACAACTAA+GGG | 0.549244 | tig0049272:-204 | Msa1466920:CDS |
| TACGCCGAACGTGTTGGTGC+CGG | 0.556200 | tig0049272:-78 | Msa1466920:CDS |
| GGGCGGAAGGGGTAAGCCAA+AGG | 0.573881 | tig0049272:-184 | Msa1466920:CDS |
| CGGCGTATTTACCGGCCTTG+AGG | 0.577173 | tig0049272:+94 | Msa1466920:intergenic |
| ATCGCGAGATTCCTCAAGGC+CGG | 0.578871 | tig0049272:-105 | Msa1466920:CDS |
| TCCGCCCTTAGTTGTGCCAG+TGG | 0.580065 | tig0049272:+200 | Msa1466920:intergenic |
| GAATCTCGCGATTCTTCCGA+CGG | 0.592664 | tig0049272:+116 | Msa1466920:intergenic |
| GGTAAATACGCCGAACGTGT+TGG | 0.593895 | tig0049272:-84 | Msa1466920:CDS |
| CCTTGAGTATCTCGCTGCTG+AGG | 0.612329 | tig0049272:-31 | None:intergenic |
| AATCTCGCGATTCTTCCGAC+GGG | 0.626786 | tig0049272:+117 | Msa1466920:intergenic |
| CCTCAGCAGCGAGATACTCA+AGG | 0.638807 | tig0049272:+31 | Msa1466920:intergenic |
| GGAGAGGTAGACAGGAGCAC+CGG | 0.644805 | tig0049272:+59 | Msa1466920:intergenic |
| TCCACTGGCACAACTAAGGG+CGG | 0.647888 | tig0049272:-201 | Msa1466920:CDS |
| AAGAATCGCGAGATTCCTCA+AGG | 0.651972 | tig0049272:-109 | Msa1466920:CDS |
| GCAGGTCTTCAATTTCCCGT+CGG | 0.653866 | tig0049272:-132 | Msa1466920:CDS |
| GATACTCAAGGACGGCGGAG+AGG | 0.669935 | tig0049272:+43 | Msa1466910:intergenic |
| AGCAGCGAGATACTCAAGGA+CGG | 0.684917 | tig0049272:+35 | Msa1466910:intergenic |
| AGCGAGATACTCAAGGACGG+CGG | 0.736224 | tig0049272:+38 | Msa1466910:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| TGAAGATCTTGAAACTGATT+TGG | + | tig0049272:84-103 | Msa1466920:intergenic | 30.0% | |
| ATCAGTTTCAAGATCTTCAA+AGG | - | tig0049272:85-104 | Msa1466920:CDS | 30.0% | |
| GTTTCAAGATCTTCAAAGGC+AGG | - | tig0049272:89-108 | Msa1466920:CDS | 40.0% | |
| AGTTCCACTGGCACAACTAA+GGG | - | tig0049272:35-54 | Msa1466920:CDS | 45.0% | |
| !! | GAAACTGATTTGGCAGCCTT+TGG | + | tig0049272:74-93 | Msa1466920:intergenic | 45.0% |
| AAGAATCGCGAGATTCCTCA+AGG | - | tig0049272:130-149 | Msa1466920:CDS | 45.0% | |
| AACACGTTCGGCGTATTTAC+CGG | + | tig0049272:156-175 | Msa1466920:intergenic | 45.0% | |
| GAGTTCCACTGGCACAACTA+AGG | - | tig0049272:34-53 | Msa1466920:CDS | 50.0% | |
| GCAGGTCTTCAATTTCCCGT+CGG | - | tig0049272:107-126 | Msa1466920:CDS | 50.0% | |
| AATCTCGCGATTCTTCCGAC+GGG | + | tig0049272:125-144 | Msa1466920:intergenic | 50.0% | |
| GAATCTCGCGATTCTTCCGA+CGG | + | tig0049272:126-145 | Msa1466920:intergenic | 50.0% | |
| GGTAAATACGCCGAACGTGT+TGG | - | tig0049272:155-174 | Msa1466920:CDS | 50.0% | |
| AGCAGCGAGATACTCAAGGA+CGG | + | tig0049272:207-226 | Msa1466920:intergenic | 50.0% | |
| TCCACTGGCACAACTAAGGG+CGG | - | tig0049272:38-57 | Msa1466920:CDS | 55.0% | |
| TGGCACAACTAAGGGCGGAA+GGG | - | tig0049272:43-62 | Msa1466920:CDS | 55.0% | |
| ATCGCGAGATTCCTCAAGGC+CGG | - | tig0049272:134-153 | Msa1466920:CDS | 55.0% | |
| AGCGAGATACTCAAGGACGG+CGG | + | tig0049272:204-223 | Msa1466920:intergenic | 55.0% | |
| TCCGCCCTTAGTTGTGCCAG+TGG | + | tig0049272:42-61 | Msa1466920:intergenic | 60.0% | |
| CTGGCACAACTAAGGGCGGA+AGG | - | tig0049272:42-61 | Msa1466920:CDS | 60.0% | |
| GGCACAACTAAGGGCGGAAG+GGG | - | tig0049272:44-63 | Msa1466920:CDS | 60.0% | |
| CGGCGTATTTACCGGCCTTG+AGG | + | tig0049272:148-167 | Msa1466920:intergenic | 60.0% | |
| ! | TACGCCGAACGTGTTGGTGC+CGG | - | tig0049272:161-180 | Msa1466920:CDS | 60.0% |
| !! | AGCACCGGCACCAACACGTT+CGG | + | tig0049272:168-187 | Msa1466920:intergenic | 60.0% |
| ! | GGAGAGGTAGACAGGAGCAC+CGG | + | tig0049272:183-202 | Msa1466920:intergenic | 60.0% |
| GATACTCAAGGACGGCGGAG+AGG | + | tig0049272:199-218 | Msa1466920:intergenic | 60.0% | |
| GGGCGGAAGGGGTAAGCCAA+AGG | - | tig0049272:55-74 | Msa1466920:CDS | 65.0% | |
| AGGACGGCGGAGAGGTAGAC+AGG | + | tig0049272:191-210 | Msa1466920:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0049272 | gene | 32 | 229 | 32 | ID=Msa1466920;Name=Msa1466920 |
| tig0049272 | mRNA | 32 | 229 | 32 | ID=Msa1466920-mRNA-1;Parent=Msa1466920;Name=Msa1466920-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|-1|0|1|-1|1|1|0|66 |
| tig0049272 | exon | 32 | 229 | 32 | ID=Msa1466920-mRNA-1:exon:25168;Parent=Msa1466920-mRNA-1 |
| tig0049272 | CDS | 32 | 229 | 32 | ID=Msa1466920-mRNA-1:cds;Parent=Msa1466920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
