AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1215870


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1215870 MtrunA17_Chr4g0065181 97.320 485 13 0 1 485 1 485 0.0 977
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 99 sgRNAs with CRISPR-Local

Find 300 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAGTCTTGTTGCCATTTA+AGG 0.175834 8_1:+77287134 None:intergenic
CCACCACCGCTTTCCTTTGC+TGG 0.184984 8_1:+77286465 None:intergenic
CCGCTTTCCTTTGCTGGTTT+CGG 0.229591 8_1:+77286471 None:intergenic
AAGATTACCATTCTTCTAAA+AGG 0.245256 8_1:-77286818 Msa1215870:CDS
TTCTTGATCAACTTGGTATC+TGG 0.246984 8_1:+77286192 None:intergenic
ACTCACGAAAATTTAAGATT+TGG 0.253055 8_1:+77285817 None:intergenic
TTATGAAACAAAGTCCTAAA+TGG 0.256561 8_1:+77286426 None:intergenic
CAAGGAGAATTTGAACTCTA+AGG 0.276155 8_1:-77286655 Msa1215870:CDS
GTTCTGGAGGAGAAGAAATA+AGG 0.277590 8_1:+77287020 None:intergenic
TCAGCATAACCATGCGAAAA+TGG 0.289824 8_1:+77285348 None:intergenic
TACAATCCGACAACCTTAAA+TGG 0.291396 8_1:-77287147 Msa1215870:CDS
CAGCTTAATTAGTTTCTTAG+AGG 0.294912 8_1:+77285281 None:intergenic
CTCACGAAAATTTAAGATTT+GGG 0.302792 8_1:+77285818 None:intergenic
CGTCGAAGAGGAAACCATTT+AGG 0.312893 8_1:-77286440 Msa1215870:CDS
TCAGCTTTGAAACAGATTAA+AGG 0.321217 8_1:-77286615 Msa1215870:CDS
ATGATGGGGTGTTCTTGTTC+TGG 0.330881 8_1:+77287004 None:intergenic
TGTCCAACGCTTTGAGTTGC+CGG 0.351486 8_1:+77285449 None:intergenic
TGAAGGGAAAACTATTCTTA+TGG 0.353653 8_1:-77286508 Msa1215870:CDS
AGCAATTTCTACAAGAATTC+CGG 0.363796 8_1:-77285700 Msa1215870:CDS
TGTGCTGGATGTGGTGAAAA+AGG 0.365765 8_1:-77285535 Msa1215870:CDS
ATTTAGGACTTTGTTTCATA+AGG 0.394361 8_1:-77286424 Msa1215870:CDS
GAAATGGAAGAGAAATGAAT+TGG 0.404831 8_1:-77286313 Msa1215870:CDS
TTGCGCTGCTAAGTTCTGTC+TGG 0.405509 8_1:+77285842 None:intergenic
ATGAAGAGTTGAGTAGTAAG+TGG 0.408973 8_1:+77287258 None:intergenic
AAGCTTGTCTCTTATTATGA+TGG 0.411561 8_1:+77286988 None:intergenic
TTTGAAGTTGAAAGGAAGAA+TGG 0.411584 8_1:+77287210 None:intergenic
GGTTTGATGGATTGAAGAAA+TGG 0.418072 8_1:-77286329 Msa1215870:CDS
ACAAATTCATGCATGTTACT+TGG 0.425679 8_1:+77285236 None:intergenic
TTTGCAAGAGCAGTTGGTGA+TGG 0.440962 8_1:-77286216 Msa1215870:CDS
TTGTTTGATGAAATTGTTTG+AGG 0.445526 8_1:+77287305 None:intergenic
CAACTTCTTCTTGATCAACT+TGG 0.448682 8_1:+77286185 None:intergenic
ACAGATTAAAGGAGCAGCTT+CGG 0.449986 8_1:-77286604 Msa1215870:CDS
TTGTTGCCATTTAAGGTTGT+CGG 0.459702 8_1:+77287141 None:intergenic
TTCTGGAGGAGAAGAAATAA+GGG 0.465428 8_1:+77287021 None:intergenic
AGCTTGTCTCTTATTATGAT+GGG 0.465581 8_1:+77286989 None:intergenic
ACTGCTAACCTTTGCACCAA+TGG 0.474150 8_1:+77286795 None:intergenic
CCATTCTTCTAAAAGGCCAT+TGG 0.477565 8_1:-77286811 Msa1215870:CDS
GTAGTAAGTGGGTGTGTAGT+TGG 0.482252 8_1:+77287270 None:intergenic
CATAGAGAGGGAAATGGCGG+TGG 0.484301 8_1:-77286399 Msa1215870:CDS
CTAAAAGGCCATTGGTGCAA+AGG 0.490692 8_1:-77286803 Msa1215870:CDS
TTTGGGAAACAACATAAAGA+AGG 0.496221 8_1:-77285878 Msa1215870:CDS
AGGTCATGGTGTGACAAGTA+TGG 0.503532 8_1:-77285564 Msa1215870:CDS
CTATCAGATCTTTGATTCAA+AGG 0.504322 8_1:+77286267 None:intergenic
GACCCATCAAGTTCAAAACT+TGG 0.504455 8_1:+77287107 None:intergenic
TCAAGAGAAAGACATTTGTC+CGG 0.505669 8_1:-77285468 Msa1215870:CDS
TGGTGATGTTGTGCTGGATG+TGG 0.505812 8_1:-77285544 Msa1215870:CDS
CAAGTATGGTGATGTTGTGC+TGG 0.508284 8_1:-77285550 Msa1215870:CDS
TGTAAAAGAGAATTCTGAAG+AGG 0.508351 8_1:-77286721 Msa1215870:CDS
GTGGTCTGTGATTGATTTGA+AGG 0.508732 8_1:-77286697 Msa1215870:CDS
CTTTCCTTTGCTGGTTTCGG+AGG 0.508857 8_1:+77286474 None:intergenic
TTGCAAGAGCAGTTGGTGAT+GGG 0.511642 8_1:-77286215 Msa1215870:CDS
TCACTTTGTTGTTTATGCAA+AGG 0.511656 8_1:+77286528 None:intergenic
GATCTTTGATTCAAAGGCAA+AGG 0.513475 8_1:+77286273 None:intergenic
CCAGCAAAGGAAAGCGGTGG+TGG 0.520086 8_1:-77286465 Msa1215870:CDS
TTCAAATCAGACTTATCCAC+CGG 0.525206 8_1:+77285681 None:intergenic
AAGGAGCATAGAGAGGGAAA+TGG 0.536239 8_1:-77286405 Msa1215870:CDS
AAGGAGAATTTGAACTCTAA+GGG 0.536500 8_1:-77286654 Msa1215870:CDS
AAGAAGAAGTTGCATTCTGA+TGG 0.539287 8_1:-77286174 Msa1215870:CDS
TGAAGAGTTGAGTAGTAAGT+GGG 0.543506 8_1:+77287259 None:intergenic
CTTTGTTGTTTATGCAAAGG+AGG 0.546200 8_1:+77286531 None:intergenic
AAGTGGTTGAACACATTCAA+AGG 0.549264 8_1:+77285133 None:intergenic
TGATAAGAATTTGATGAACA+AGG 0.549842 8_1:-77286673 Msa1215870:CDS
ATGGTTATGCTGAGAGTACA+TGG 0.553105 8_1:-77285338 Msa1215870:CDS
TTGATGGGTCTTCACAAAGA+AGG 0.556368 8_1:-77287094 Msa1215870:CDS
GTGCAAAGGTTAGCAGTACA+AGG 0.558986 8_1:-77286789 Msa1215870:CDS
GATGCTAGAGATGTGATCGC+AGG 0.559667 8_1:-77286756 Msa1215870:CDS
GGGAAATGGCGGTGGGTCTG+AGG 0.563164 8_1:-77286391 Msa1215870:CDS
TGTCCGGCAACTCAAAGCGT+TGG 0.564089 8_1:-77285452 Msa1215870:CDS
GACAATCTATGTTCAGCAGA+AGG 0.564751 8_1:+77287175 None:intergenic
TTGCATAAACAACAAAGTGA+AGG 0.566433 8_1:-77286525 Msa1215870:CDS
TTTCATAAGGAGCATAGAGA+GGG 0.572068 8_1:-77286411 Msa1215870:CDS
GTTTCAAGAGGCAGTTCAAG+TGG 0.578231 8_1:+77285116 None:intergenic
ACTGCCTCTTGAAACCTCAC+TGG 0.580965 8_1:-77285108 Msa1215870:three_prime_UTR
TGCATAAACAACAAAGTGAA+GGG 0.586261 8_1:-77286524 Msa1215870:CDS
TCTAAGGGAAAATCAAGTCA+TGG 0.589460 8_1:-77286639 Msa1215870:CDS
TGCAAACAGGAATGATCAGA+TGG 0.595419 8_1:-77285724 Msa1215870:intron
ATGGGGTGTTCTTGTTCTGG+AGG 0.602140 8_1:+77287007 None:intergenic
CCATCAAGTTCAAAACTTGG+TGG 0.605099 8_1:+77287110 None:intergenic
GCTTGTCTCTTATTATGATG+GGG 0.610177 8_1:+77286990 None:intergenic
ATGCTAGAGATGTGATCGCA+GGG 0.616522 8_1:-77286755 Msa1215870:CDS
GTTTCATAAGGAGCATAGAG+AGG 0.616807 8_1:-77286412 Msa1215870:CDS
CTAAGAAACTAATTAAGCTG+AGG 0.620665 8_1:-77285278 Msa1215870:three_prime_UTR
GCGGTGGTGGTTCGTCGAAG+AGG 0.628194 8_1:-77286452 Msa1215870:CDS
GACTCCAGTGAGGTTTCAAG+AGG 0.629303 8_1:+77285104 None:intergenic
AAGAGAATTCTGAAGAGGAG+TGG 0.634631 8_1:-77286716 Msa1215870:CDS
AGGGAAAACTATTCTTATGG+AGG 0.639054 8_1:-77286505 Msa1215870:CDS
ACAATTTCATCAAACAACAA+TGG 0.645515 8_1:-77287299 Msa1215870:exon
CCGAAACCAGCAAAGGAAAG+CGG 0.649904 8_1:-77286471 Msa1215870:CDS
ATAGAGAGGGAAATGGCGGT+GGG 0.650035 8_1:-77286398 Msa1215870:CDS
TGAGCCTCCGAAACCAGCAA+AGG 0.650047 8_1:-77286478 Msa1215870:CDS
CTGAGGTAGAACAAAGAGGA+GGG 0.655821 8_1:-77286374 Msa1215870:CDS
TCTGAGGTAGAACAAAGAGG+AGG 0.661547 8_1:-77286375 Msa1215870:CDS
GAATCAAAGATCTGATAGCG+AGG 0.664604 8_1:-77286262 Msa1215870:CDS
AATTTCTACAAGAATTCCGG+TGG 0.667726 8_1:-77285697 Msa1215870:CDS
GAGCATAGAGAGGGAAATGG+CGG 0.674277 8_1:-77286402 Msa1215870:CDS
ACATGGAACTGATTAAGCTG+AGG 0.677745 8_1:-77285321 Msa1215870:exon
AAACCAGCAAAGGAAAGCGG+TGG 0.686736 8_1:-77286468 Msa1215870:CDS
GGGTCTGAGGTAGAACAAAG+AGG 0.686892 8_1:-77286378 Msa1215870:CDS
AGTATTACTAGACTCCAGTG+AGG 0.766208 8_1:+77285094 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAGCAAAAAGTTAAAAA+TGG + chr8_1:77285521-77285540 None:intergenic 15.0%
!!! GTTTTTGGTTTTTTATTTTT+TGG - chr8_1:77285541-77285560 Msa1215870:CDS 15.0%
!!! CAAACTTTCATATAATTTTA+TGG - chr8_1:77286381-77286400 Msa1215870:CDS 15.0%
!!! ATAAACTTTAAGAACTAAAT+CGG - chr8_1:77286424-77286443 Msa1215870:CDS 15.0%
!! TTTGTTTGTGATTTATTAAT+AGG - chr8_1:77286521-77286540 Msa1215870:CDS 15.0%
!! CAGTAGTTAAAAAAAAATTA+TGG + chr8_1:77287373-77287392 None:intergenic 15.0%
!! AATAAGCAAAAAGTTAAAAA+TGG + chr8_1:77285521-77285540 None:intergenic 15.0%
!!! GTTTTTGGTTTTTTATTTTT+TGG - chr8_1:77285541-77285560 Msa1215870:CDS 15.0%
!!! CAAACTTTCATATAATTTTA+TGG - chr8_1:77286381-77286400 Msa1215870:CDS 15.0%
!!! ATAAACTTTAAGAACTAAAT+CGG - chr8_1:77286424-77286443 Msa1215870:CDS 15.0%
!! TTTGTTTGTGATTTATTAAT+AGG - chr8_1:77286521-77286540 Msa1215870:CDS 15.0%
!! CAGTAGTTAAAAAAAAATTA+TGG + chr8_1:77287373-77287392 None:intergenic 15.0%
!!! AACTTTTTGCTTATTGTTTT+TGG - chr8_1:77285526-77285545 Msa1215870:CDS 20.0%
!!! TTTATTTTTTGGACCTTATT+AGG - chr8_1:77285552-77285571 Msa1215870:CDS 20.0%
!! TATCTATGAAAAAATCAGAT+GGG + chr8_1:77286278-77286297 None:intergenic 20.0%
!! TTATCTATGAAAAAATCAGA+TGG + chr8_1:77286279-77286298 None:intergenic 20.0%
!!! ATCTGATTTTTTCATAGATA+AGG - chr8_1:77286278-77286297 Msa1215870:CDS 20.0%
!!! TGTGATTTATTAATAGGTTT+TGG - chr8_1:77286527-77286546 Msa1215870:CDS 20.0%
!!! GTGATTTATTAATAGGTTTT+GGG - chr8_1:77286528-77286547 Msa1215870:CDS 20.0%
!!! TTTTCTCATTAAAGTTCATT+TGG - chr8_1:77286630-77286649 Msa1215870:CDS 20.0%
!!! AACTTTTTGCTTATTGTTTT+TGG - chr8_1:77285526-77285545 Msa1215870:CDS 20.0%
!!! TTTATTTTTTGGACCTTATT+AGG - chr8_1:77285552-77285571 Msa1215870:CDS 20.0%
!! TATCTATGAAAAAATCAGAT+GGG + chr8_1:77286278-77286297 None:intergenic 20.0%
!! TTATCTATGAAAAAATCAGA+TGG + chr8_1:77286279-77286298 None:intergenic 20.0%
!!! ATCTGATTTTTTCATAGATA+AGG - chr8_1:77286278-77286297 Msa1215870:CDS 20.0%
!!! TGTGATTTATTAATAGGTTT+TGG - chr8_1:77286527-77286546 Msa1215870:CDS 20.0%
!!! GTGATTTATTAATAGGTTTT+GGG - chr8_1:77286528-77286547 Msa1215870:CDS 20.0%
!!! TTTTCTCATTAAAGTTCATT+TGG - chr8_1:77286630-77286649 Msa1215870:CDS 20.0%
!!! AAATTGTTTGAGGTTTTTGT+TGG + chr8_1:77285111-77285130 None:intergenic 25.0%
! TTGTTTGATGAAATTGTTTG+AGG + chr8_1:77285121-77285140 None:intergenic 25.0%
! ACAATTTCATCAAACAACAA+TGG - chr8_1:77285124-77285143 Msa1215870:three_prime_UTR 25.0%
! AGTTCAATGATGAATTCAAA+GGG + chr8_1:77285492-77285511 None:intergenic 25.0%
! TAGTTCAATGATGAATTCAA+AGG + chr8_1:77285493-77285512 None:intergenic 25.0%
! AAGATTACCATTCTTCTAAA+AGG - chr8_1:77285605-77285624 Msa1215870:intron 25.0%
! TGATAAGAATTTGATGAACA+AGG - chr8_1:77285750-77285769 Msa1215870:intron 25.0%
! TTATGAAACAAAGTCCTAAA+TGG + chr8_1:77286000-77286019 None:intergenic 25.0%
!! ATTTAGGACTTTGTTTCATA+AGG - chr8_1:77285999-77286018 Msa1215870:intron 25.0%
! ATCTATGAAAAAATCAGATG+GGG + chr8_1:77286277-77286296 None:intergenic 25.0%
!! CTCACGAAAATTTAAGATTT+GGG + chr8_1:77286608-77286627 None:intergenic 25.0%
!! ACTCACGAAAATTTAAGATT+TGG + chr8_1:77286609-77286628 None:intergenic 25.0%
!! AACATTGTACTCAACTTTTA+CGG - chr8_1:77286802-77286821 Msa1215870:CDS 25.0%
!! TTTTGGTCATCAAGATAATT+CGG - chr8_1:77287032-77287051 Msa1215870:CDS 25.0%
!!! AAATTGTTTGAGGTTTTTGT+TGG + chr8_1:77285111-77285130 None:intergenic 25.0%
! TTGTTTGATGAAATTGTTTG+AGG + chr8_1:77285121-77285140 None:intergenic 25.0%
! ACAATTTCATCAAACAACAA+TGG - chr8_1:77285124-77285143 Msa1215870:three_prime_UTR 25.0%
! AGTTCAATGATGAATTCAAA+GGG + chr8_1:77285492-77285511 None:intergenic 25.0%
! TAGTTCAATGATGAATTCAA+AGG + chr8_1:77285493-77285512 None:intergenic 25.0%
! AAGATTACCATTCTTCTAAA+AGG - chr8_1:77285605-77285624 Msa1215870:intron 25.0%
! TGATAAGAATTTGATGAACA+AGG - chr8_1:77285750-77285769 Msa1215870:intron 25.0%
! TTATGAAACAAAGTCCTAAA+TGG + chr8_1:77286000-77286019 None:intergenic 25.0%
!! ATTTAGGACTTTGTTTCATA+AGG - chr8_1:77285999-77286018 Msa1215870:intron 25.0%
! ATCTATGAAAAAATCAGATG+GGG + chr8_1:77286277-77286296 None:intergenic 25.0%
!! CTCACGAAAATTTAAGATTT+GGG + chr8_1:77286608-77286627 None:intergenic 25.0%
!! ACTCACGAAAATTTAAGATT+TGG + chr8_1:77286609-77286628 None:intergenic 25.0%
!! AACATTGTACTCAACTTTTA+CGG - chr8_1:77286802-77286821 Msa1215870:CDS 25.0%
!! TTTTGGTCATCAAGATAATT+CGG - chr8_1:77287032-77287051 Msa1215870:CDS 25.0%
! TTTGAAGTTGAAAGGAAGAA+TGG + chr8_1:77285216-77285235 None:intergenic 30.0%
!!! GAACGTTTTTTGAAGTTGAA+AGG + chr8_1:77285224-77285243 None:intergenic 30.0%
AGCTTGTCTCTTATTATGAT+GGG + chr8_1:77285437-77285456 None:intergenic 30.0%
AAGCTTGTCTCTTATTATGA+TGG + chr8_1:77285438-77285457 None:intergenic 30.0%
GCATAAAGTAGTTCCTAATA+AGG + chr8_1:77285568-77285587 None:intergenic 30.0%
! TGTAAAAGAGAATTCTGAAG+AGG - chr8_1:77285702-77285721 Msa1215870:CDS 30.0%
AAGGAGAATTTGAACTCTAA+GGG - chr8_1:77285769-77285788 Msa1215870:intron 30.0%
!! TCAGCTTTGAAACAGATTAA+AGG - chr8_1:77285808-77285827 Msa1215870:intron 30.0%
!! TCACTTTGTTGTTTATGCAA+AGG + chr8_1:77285898-77285917 None:intergenic 30.0%
TTGCATAAACAACAAAGTGA+AGG - chr8_1:77285898-77285917 Msa1215870:intron 30.0%
TGCATAAACAACAAAGTGAA+GGG - chr8_1:77285899-77285918 Msa1215870:intron 30.0%
TGAAGGGAAAACTATTCTTA+TGG - chr8_1:77285915-77285934 Msa1215870:intron 30.0%
GAAATCAGTGAAAAAGCAAT+GGG - chr8_1:77286071-77286090 Msa1215870:intron 30.0%
AAATCAGTGAAAAAGCAATG+GGG - chr8_1:77286072-77286091 Msa1215870:intron 30.0%
GAAATGGAAGAGAAATGAAT+TGG - chr8_1:77286110-77286129 Msa1215870:intron 30.0%
CTATCAGATCTTTGATTCAA+AGG + chr8_1:77286159-77286178 None:intergenic 30.0%
! CTAGATTGAAACATAATGGA+AGG + chr8_1:77286316-77286335 None:intergenic 30.0%
CATGCTAGATTGAAACATAA+TGG + chr8_1:77286320-77286339 None:intergenic 30.0%
GAACTAAATCGGATAGTTTA+TGG - chr8_1:77286435-77286454 Msa1215870:CDS 30.0%
!! TTTTCGCTTTGAGCTAATTT+TGG - chr8_1:77286481-77286500 Msa1215870:CDS 30.0%
TTTGGGAAACAACATAAAGA+AGG - chr8_1:77286545-77286564 Msa1215870:CDS 30.0%
AGCAATTTCTACAAGAATTC+CGG - chr8_1:77286723-77286742 Msa1215870:CDS 30.0%
! ATCCAAAGTTGACTTACTTA+GGG + chr8_1:77286777-77286796 None:intergenic 30.0%
! AATCCAAAGTTGACTTACTT+AGG + chr8_1:77286778-77286797 None:intergenic 30.0%
! AACGTTCATCCAAATCTTTT+TGG - chr8_1:77287015-77287034 Msa1215870:CDS 30.0%
! TCTTGATGACCAAAAAGATT+TGG + chr8_1:77287027-77287046 None:intergenic 30.0%
! CAGCTTAATTAGTTTCTTAG+AGG + chr8_1:77287145-77287164 None:intergenic 30.0%
CTAAGAAACTAATTAAGCTG+AGG - chr8_1:77287145-77287164 Msa1215870:CDS 30.0%
ACAAATTCATGCATGTTACT+TGG + chr8_1:77287190-77287209 None:intergenic 30.0%
! TTTGAAGTTGAAAGGAAGAA+TGG + chr8_1:77285216-77285235 None:intergenic 30.0%
!!! GAACGTTTTTTGAAGTTGAA+AGG + chr8_1:77285224-77285243 None:intergenic 30.0%
AGCTTGTCTCTTATTATGAT+GGG + chr8_1:77285437-77285456 None:intergenic 30.0%
AAGCTTGTCTCTTATTATGA+TGG + chr8_1:77285438-77285457 None:intergenic 30.0%
GCATAAAGTAGTTCCTAATA+AGG + chr8_1:77285568-77285587 None:intergenic 30.0%
! TGTAAAAGAGAATTCTGAAG+AGG - chr8_1:77285702-77285721 Msa1215870:CDS 30.0%
AAGGAGAATTTGAACTCTAA+GGG - chr8_1:77285769-77285788 Msa1215870:intron 30.0%
!! TCAGCTTTGAAACAGATTAA+AGG - chr8_1:77285808-77285827 Msa1215870:intron 30.0%
!! TCACTTTGTTGTTTATGCAA+AGG + chr8_1:77285898-77285917 None:intergenic 30.0%
TTGCATAAACAACAAAGTGA+AGG - chr8_1:77285898-77285917 Msa1215870:intron 30.0%
TGCATAAACAACAAAGTGAA+GGG - chr8_1:77285899-77285918 Msa1215870:intron 30.0%
TGAAGGGAAAACTATTCTTA+TGG - chr8_1:77285915-77285934 Msa1215870:intron 30.0%
GAAATCAGTGAAAAAGCAAT+GGG - chr8_1:77286071-77286090 Msa1215870:intron 30.0%
AAATCAGTGAAAAAGCAATG+GGG - chr8_1:77286072-77286091 Msa1215870:intron 30.0%
GAAATGGAAGAGAAATGAAT+TGG - chr8_1:77286110-77286129 Msa1215870:intron 30.0%
CTATCAGATCTTTGATTCAA+AGG + chr8_1:77286159-77286178 None:intergenic 30.0%
! CTAGATTGAAACATAATGGA+AGG + chr8_1:77286316-77286335 None:intergenic 30.0%
CATGCTAGATTGAAACATAA+TGG + chr8_1:77286320-77286339 None:intergenic 30.0%
GAACTAAATCGGATAGTTTA+TGG - chr8_1:77286435-77286454 Msa1215870:CDS 30.0%
!! TTTTCGCTTTGAGCTAATTT+TGG - chr8_1:77286481-77286500 Msa1215870:CDS 30.0%
TTTGGGAAACAACATAAAGA+AGG - chr8_1:77286545-77286564 Msa1215870:CDS 30.0%
AGCAATTTCTACAAGAATTC+CGG - chr8_1:77286723-77286742 Msa1215870:CDS 30.0%
! ATCCAAAGTTGACTTACTTA+GGG + chr8_1:77286777-77286796 None:intergenic 30.0%
! AATCCAAAGTTGACTTACTT+AGG + chr8_1:77286778-77286797 None:intergenic 30.0%
! AACGTTCATCCAAATCTTTT+TGG - chr8_1:77287015-77287034 Msa1215870:CDS 30.0%
! TCTTGATGACCAAAAAGATT+TGG + chr8_1:77287027-77287046 None:intergenic 30.0%
! CAGCTTAATTAGTTTCTTAG+AGG + chr8_1:77287145-77287164 None:intergenic 30.0%
CTAAGAAACTAATTAAGCTG+AGG - chr8_1:77287145-77287164 Msa1215870:CDS 30.0%
ACAAATTCATGCATGTTACT+TGG + chr8_1:77287190-77287209 None:intergenic 30.0%
TGAAGAGTTGAGTAGTAAGT+GGG + chr8_1:77285167-77285186 None:intergenic 35.0%
ATGAAGAGTTGAGTAGTAAG+TGG + chr8_1:77285168-77285187 None:intergenic 35.0%
!! AAGAATGGTTTTGCAGAAAG+AGG + chr8_1:77285201-77285220 None:intergenic 35.0%
TACAATCCGACAACCTTAAA+TGG - chr8_1:77285276-77285295 Msa1215870:three_prime_UTR 35.0%
! TTGTTGCCATTTAAGGTTGT+CGG + chr8_1:77285285-77285304 None:intergenic 35.0%
!! AAGAGTCTTGTTGCCATTTA+AGG + chr8_1:77285292-77285311 None:intergenic 35.0%
!!! CACCAAGTTTTGAACTTGAT+GGG - chr8_1:77285314-77285333 Msa1215870:exon 35.0%
! TTCTGGAGGAGAAGAAATAA+GGG + chr8_1:77285405-77285424 None:intergenic 35.0%
GCTTGTCTCTTATTATGATG+GGG + chr8_1:77285436-77285455 None:intergenic 35.0%
CAAGGAGAATTTGAACTCTA+AGG - chr8_1:77285768-77285787 Msa1215870:intron 35.0%
TCTAAGGGAAAATCAAGTCA+TGG - chr8_1:77285784-77285803 Msa1215870:intron 35.0%
!! CTTTGTTGTTTATGCAAAGG+AGG + chr8_1:77285895-77285914 None:intergenic 35.0%
AGGGAAAACTATTCTTATGG+AGG - chr8_1:77285918-77285937 Msa1215870:intron 35.0%
! TTTCATAAGGAGCATAGAGA+GGG - chr8_1:77286012-77286031 Msa1215870:intron 35.0%
GGAAATCAGTGAAAAAGCAA+TGG - chr8_1:77286070-77286089 Msa1215870:intron 35.0%
AATCAGTGAAAAAGCAATGG+GGG - chr8_1:77286073-77286092 Msa1215870:intron 35.0%
!! GGTTTGATGGATTGAAGAAA+TGG - chr8_1:77286094-77286113 Msa1215870:intron 35.0%
GATCTTTGATTCAAAGGCAA+AGG + chr8_1:77286153-77286172 None:intergenic 35.0%
TTCTTGATCAACTTGGTATC+TGG + chr8_1:77286234-77286253 None:intergenic 35.0%
CAACTTCTTCTTGATCAACT+TGG + chr8_1:77286241-77286260 None:intergenic 35.0%
AAGAAGAAGTTGCATTCTGA+TGG - chr8_1:77286249-77286268 Msa1215870:CDS 35.0%
AATTTCTACAAGAATTCCGG+TGG - chr8_1:77286726-77286745 Msa1215870:CDS 35.0%
TTCAAATCAGACTTATCCAC+CGG + chr8_1:77286745-77286764 None:intergenic 35.0%
TTCCCTAAGTAAGTCAACTT+TGG - chr8_1:77286772-77286791 Msa1215870:CDS 35.0%
CAAAAACCACGTTGAAGAAA+TGG - chr8_1:77286915-77286934 Msa1215870:intron 35.0%
! TGTTTTCCATTTCTTCAACG+TGG + chr8_1:77286924-77286943 None:intergenic 35.0%
TCAAGAGAAAGACATTTGTC+CGG - chr8_1:77286955-77286974 Msa1215870:intron 35.0%
! AACATCAATCCATTTTCGCA+TGG - chr8_1:77287066-77287085 Msa1215870:CDS 35.0%
AAGTGGTTGAACACATTCAA+AGG + chr8_1:77287293-77287312 None:intergenic 35.0%
TGAAGAGTTGAGTAGTAAGT+GGG + chr8_1:77285167-77285186 None:intergenic 35.0%
ATGAAGAGTTGAGTAGTAAG+TGG + chr8_1:77285168-77285187 None:intergenic 35.0%
!! AAGAATGGTTTTGCAGAAAG+AGG + chr8_1:77285201-77285220 None:intergenic 35.0%
TACAATCCGACAACCTTAAA+TGG - chr8_1:77285276-77285295 Msa1215870:three_prime_UTR 35.0%
! TTGTTGCCATTTAAGGTTGT+CGG + chr8_1:77285285-77285304 None:intergenic 35.0%
!! AAGAGTCTTGTTGCCATTTA+AGG + chr8_1:77285292-77285311 None:intergenic 35.0%
!!! CACCAAGTTTTGAACTTGAT+GGG - chr8_1:77285314-77285333 Msa1215870:exon 35.0%
! TTCTGGAGGAGAAGAAATAA+GGG + chr8_1:77285405-77285424 None:intergenic 35.0%
GCTTGTCTCTTATTATGATG+GGG + chr8_1:77285436-77285455 None:intergenic 35.0%
CAAGGAGAATTTGAACTCTA+AGG - chr8_1:77285768-77285787 Msa1215870:intron 35.0%
TCTAAGGGAAAATCAAGTCA+TGG - chr8_1:77285784-77285803 Msa1215870:intron 35.0%
!! CTTTGTTGTTTATGCAAAGG+AGG + chr8_1:77285895-77285914 None:intergenic 35.0%
AGGGAAAACTATTCTTATGG+AGG - chr8_1:77285918-77285937 Msa1215870:intron 35.0%
! TTTCATAAGGAGCATAGAGA+GGG - chr8_1:77286012-77286031 Msa1215870:intron 35.0%
GGAAATCAGTGAAAAAGCAA+TGG - chr8_1:77286070-77286089 Msa1215870:intron 35.0%
AATCAGTGAAAAAGCAATGG+GGG - chr8_1:77286073-77286092 Msa1215870:intron 35.0%
!! GGTTTGATGGATTGAAGAAA+TGG - chr8_1:77286094-77286113 Msa1215870:intron 35.0%
GATCTTTGATTCAAAGGCAA+AGG + chr8_1:77286153-77286172 None:intergenic 35.0%
TTCTTGATCAACTTGGTATC+TGG + chr8_1:77286234-77286253 None:intergenic 35.0%
CAACTTCTTCTTGATCAACT+TGG + chr8_1:77286241-77286260 None:intergenic 35.0%
AAGAAGAAGTTGCATTCTGA+TGG - chr8_1:77286249-77286268 Msa1215870:CDS 35.0%
AATTTCTACAAGAATTCCGG+TGG - chr8_1:77286726-77286745 Msa1215870:CDS 35.0%
TTCAAATCAGACTTATCCAC+CGG + chr8_1:77286745-77286764 None:intergenic 35.0%
TTCCCTAAGTAAGTCAACTT+TGG - chr8_1:77286772-77286791 Msa1215870:CDS 35.0%
CAAAAACCACGTTGAAGAAA+TGG - chr8_1:77286915-77286934 Msa1215870:intron 35.0%
! TGTTTTCCATTTCTTCAACG+TGG + chr8_1:77286924-77286943 None:intergenic 35.0%
TCAAGAGAAAGACATTTGTC+CGG - chr8_1:77286955-77286974 Msa1215870:intron 35.0%
! AACATCAATCCATTTTCGCA+TGG - chr8_1:77287066-77287085 Msa1215870:CDS 35.0%
AAGTGGTTGAACACATTCAA+AGG + chr8_1:77287293-77287312 None:intergenic 35.0%
GACAATCTATGTTCAGCAGA+AGG + chr8_1:77285251-77285270 None:intergenic 40.0%
CCATCAAGTTCAAAACTTGG+TGG + chr8_1:77285316-77285335 None:intergenic 40.0%
!!! CCACCAAGTTTTGAACTTGA+TGG - chr8_1:77285313-77285332 Msa1215870:exon 40.0%
GACCCATCAAGTTCAAAACT+TGG + chr8_1:77285319-77285338 None:intergenic 40.0%
! TTGATGGGTCTTCACAAAGA+AGG - chr8_1:77285329-77285348 Msa1215870:exon 40.0%
!! GTTCTGGAGGAGAAGAAATA+AGG + chr8_1:77285406-77285425 None:intergenic 40.0%
!!! AGACAAGCTTCTGTTTTTGC+AGG - chr8_1:77285448-77285467 Msa1215870:CDS 40.0%
!! CCAATGGCCTTTTAGAAGAA+TGG + chr8_1:77285615-77285634 None:intergenic 40.0%
! CCATTCTTCTAAAAGGCCAT+TGG - chr8_1:77285612-77285631 Msa1215870:intron 40.0%
! AAGAGAATTCTGAAGAGGAG+TGG - chr8_1:77285707-77285726 Msa1215870:CDS 40.0%
!! GTGGTCTGTGATTGATTTGA+AGG - chr8_1:77285726-77285745 Msa1215870:intron 40.0%
ACAGATTAAAGGAGCAGCTT+CGG - chr8_1:77285819-77285838 Msa1215870:intron 40.0%
! GTTTCATAAGGAGCATAGAG+AGG - chr8_1:77286011-77286030 Msa1215870:intron 40.0%
AAAAAGCAATGGGGGTTTGA+TGG - chr8_1:77286081-77286100 Msa1215870:intron 40.0%
! GAATCAAAGATCTGATAGCG+AGG - chr8_1:77286161-77286180 Msa1215870:CDS 40.0%
TGATCATTCCTGTTTGCACA+CGG + chr8_1:77286697-77286716 None:intergenic 40.0%
TGCAAACAGGAATGATCAGA+TGG - chr8_1:77286699-77286718 Msa1215870:CDS 40.0%
TTGTGTGTCTGATGTGTTGA+AGG - chr8_1:77286839-77286858 Msa1215870:CDS 40.0%
TCAGCATAACCATGCGAAAA+TGG + chr8_1:77287078-77287097 None:intergenic 40.0%
! ATGGTTATGCTGAGAGTACA+TGG - chr8_1:77287085-77287104 Msa1215870:CDS 40.0%
ACATGGAACTGATTAAGCTG+AGG - chr8_1:77287102-77287121 Msa1215870:CDS 40.0%
AGTATTACTAGACTCCAGTG+AGG + chr8_1:77287332-77287351 None:intergenic 40.0%
GACAATCTATGTTCAGCAGA+AGG + chr8_1:77285251-77285270 None:intergenic 40.0%
CCATCAAGTTCAAAACTTGG+TGG + chr8_1:77285316-77285335 None:intergenic 40.0%
!!! CCACCAAGTTTTGAACTTGA+TGG - chr8_1:77285313-77285332 Msa1215870:exon 40.0%
GACCCATCAAGTTCAAAACT+TGG + chr8_1:77285319-77285338 None:intergenic 40.0%
! TTGATGGGTCTTCACAAAGA+AGG - chr8_1:77285329-77285348 Msa1215870:exon 40.0%
!! GTTCTGGAGGAGAAGAAATA+AGG + chr8_1:77285406-77285425 None:intergenic 40.0%
!!! AGACAAGCTTCTGTTTTTGC+AGG - chr8_1:77285448-77285467 Msa1215870:CDS 40.0%
!! CCAATGGCCTTTTAGAAGAA+TGG + chr8_1:77285615-77285634 None:intergenic 40.0%
! CCATTCTTCTAAAAGGCCAT+TGG - chr8_1:77285612-77285631 Msa1215870:intron 40.0%
! AAGAGAATTCTGAAGAGGAG+TGG - chr8_1:77285707-77285726 Msa1215870:CDS 40.0%
!! GTGGTCTGTGATTGATTTGA+AGG - chr8_1:77285726-77285745 Msa1215870:intron 40.0%
ACAGATTAAAGGAGCAGCTT+CGG - chr8_1:77285819-77285838 Msa1215870:intron 40.0%
! GTTTCATAAGGAGCATAGAG+AGG - chr8_1:77286011-77286030 Msa1215870:intron 40.0%
AAAAAGCAATGGGGGTTTGA+TGG - chr8_1:77286081-77286100 Msa1215870:intron 40.0%
! GAATCAAAGATCTGATAGCG+AGG - chr8_1:77286161-77286180 Msa1215870:CDS 40.0%
TGATCATTCCTGTTTGCACA+CGG + chr8_1:77286697-77286716 None:intergenic 40.0%
TGCAAACAGGAATGATCAGA+TGG - chr8_1:77286699-77286718 Msa1215870:CDS 40.0%
TTGTGTGTCTGATGTGTTGA+AGG - chr8_1:77286839-77286858 Msa1215870:CDS 40.0%
TCAGCATAACCATGCGAAAA+TGG + chr8_1:77287078-77287097 None:intergenic 40.0%
! ATGGTTATGCTGAGAGTACA+TGG - chr8_1:77287085-77287104 Msa1215870:CDS 40.0%
ACATGGAACTGATTAAGCTG+AGG - chr8_1:77287102-77287121 Msa1215870:CDS 40.0%
AGTATTACTAGACTCCAGTG+AGG + chr8_1:77287332-77287351 None:intergenic 40.0%
GTAGTAAGTGGGTGTGTAGT+TGG + chr8_1:77285156-77285175 None:intergenic 45.0%
! ATGATGGGGTGTTCTTGTTC+TGG + chr8_1:77285422-77285441 None:intergenic 45.0%
CTAAAAGGCCATTGGTGCAA+AGG - chr8_1:77285620-77285639 Msa1215870:intron 45.0%
ACTGCTAACCTTTGCACCAA+TGG + chr8_1:77285631-77285650 None:intergenic 45.0%
GTGCAAAGGTTAGCAGTACA+AGG - chr8_1:77285634-77285653 Msa1215870:intron 45.0%
ATGCTAGAGATGTGATCGCA+GGG - chr8_1:77285668-77285687 Msa1215870:CDS 45.0%
! AAAGGAGCAGCTTCGGTTTT+CGG - chr8_1:77285826-77285845 Msa1215870:CDS 45.0%
CGTCGAAGAGGAAACCATTT+AGG - chr8_1:77285983-77286002 Msa1215870:intron 45.0%
! AAGGAGCATAGAGAGGGAAA+TGG - chr8_1:77286018-77286037 Msa1215870:intron 45.0%
! TCTGAGGTAGAACAAAGAGG+AGG - chr8_1:77286048-77286067 Msa1215870:intron 45.0%
CTGAGGTAGAACAAAGAGGA+GGG - chr8_1:77286049-77286068 Msa1215870:intron 45.0%
! CAGTCTTTTGCAAGAGCAGT+TGG - chr8_1:77286201-77286220 Msa1215870:CDS 45.0%
!! TTTGCAAGAGCAGTTGGTGA+TGG - chr8_1:77286207-77286226 Msa1215870:CDS 45.0%
!! TTGCAAGAGCAGTTGGTGAT+GGG - chr8_1:77286208-77286227 Msa1215870:CDS 45.0%
AACATTTGCCGTGTGCAAAC+AGG - chr8_1:77286686-77286705 Msa1215870:CDS 45.0%
GTCTGATGTGTTGAAGGTCA+TGG - chr8_1:77286845-77286864 Msa1215870:CDS 45.0%
AGGTCATGGTGTGACAAGTA+TGG - chr8_1:77286859-77286878 Msa1215870:intron 45.0%
! CAAGTATGGTGATGTTGTGC+TGG - chr8_1:77286873-77286892 Msa1215870:intron 45.0%
TGTGCTGGATGTGGTGAAAA+AGG - chr8_1:77286888-77286907 Msa1215870:intron 45.0%
GTTTCAAGAGGCAGTTCAAG+TGG + chr8_1:77287310-77287329 None:intergenic 45.0%
GTAGTAAGTGGGTGTGTAGT+TGG + chr8_1:77285156-77285175 None:intergenic 45.0%
! ATGATGGGGTGTTCTTGTTC+TGG + chr8_1:77285422-77285441 None:intergenic 45.0%
CTAAAAGGCCATTGGTGCAA+AGG - chr8_1:77285620-77285639 Msa1215870:intron 45.0%
ACTGCTAACCTTTGCACCAA+TGG + chr8_1:77285631-77285650 None:intergenic 45.0%
GTGCAAAGGTTAGCAGTACA+AGG - chr8_1:77285634-77285653 Msa1215870:intron 45.0%
ATGCTAGAGATGTGATCGCA+GGG - chr8_1:77285668-77285687 Msa1215870:CDS 45.0%
! AAAGGAGCAGCTTCGGTTTT+CGG - chr8_1:77285826-77285845 Msa1215870:CDS 45.0%
CGTCGAAGAGGAAACCATTT+AGG - chr8_1:77285983-77286002 Msa1215870:intron 45.0%
! AAGGAGCATAGAGAGGGAAA+TGG - chr8_1:77286018-77286037 Msa1215870:intron 45.0%
! TCTGAGGTAGAACAAAGAGG+AGG - chr8_1:77286048-77286067 Msa1215870:intron 45.0%
CTGAGGTAGAACAAAGAGGA+GGG - chr8_1:77286049-77286068 Msa1215870:intron 45.0%
! CAGTCTTTTGCAAGAGCAGT+TGG - chr8_1:77286201-77286220 Msa1215870:CDS 45.0%
!! TTTGCAAGAGCAGTTGGTGA+TGG - chr8_1:77286207-77286226 Msa1215870:CDS 45.0%
!! TTGCAAGAGCAGTTGGTGAT+GGG - chr8_1:77286208-77286227 Msa1215870:CDS 45.0%
AACATTTGCCGTGTGCAAAC+AGG - chr8_1:77286686-77286705 Msa1215870:CDS 45.0%
GTCTGATGTGTTGAAGGTCA+TGG - chr8_1:77286845-77286864 Msa1215870:CDS 45.0%
AGGTCATGGTGTGACAAGTA+TGG - chr8_1:77286859-77286878 Msa1215870:intron 45.0%
! CAAGTATGGTGATGTTGTGC+TGG - chr8_1:77286873-77286892 Msa1215870:intron 45.0%
TGTGCTGGATGTGGTGAAAA+AGG - chr8_1:77286888-77286907 Msa1215870:intron 45.0%
GTTTCAAGAGGCAGTTCAAG+TGG + chr8_1:77287310-77287329 None:intergenic 45.0%
! ATGGGGTGTTCTTGTTCTGG+AGG + chr8_1:77285419-77285438 None:intergenic 50.0%
GATGCTAGAGATGTGATCGC+AGG - chr8_1:77285667-77285686 Msa1215870:CDS 50.0%
! AAGGAGCAGCTTCGGTTTTC+GGG - chr8_1:77285827-77285846 Msa1215870:CDS 50.0%
!! CTTTCCTTTGCTGGTTTCGG+AGG + chr8_1:77285952-77285971 None:intergenic 50.0%
!! CCGCTTTCCTTTGCTGGTTT+CGG + chr8_1:77285955-77285974 None:intergenic 50.0%
CCGAAACCAGCAAAGGAAAG+CGG - chr8_1:77285952-77285971 Msa1215870:intron 50.0%
AAACCAGCAAAGGAAAGCGG+TGG - chr8_1:77285955-77285974 Msa1215870:intron 50.0%
GAGCATAGAGAGGGAAATGG+CGG - chr8_1:77286021-77286040 Msa1215870:intron 50.0%
ATAGAGAGGGAAATGGCGGT+GGG - chr8_1:77286025-77286044 Msa1215870:intron 50.0%
! GGGTCTGAGGTAGAACAAAG+AGG - chr8_1:77286045-77286064 Msa1215870:intron 50.0%
TTGCGCTGCTAAGTTCTGTC+TGG + chr8_1:77286584-77286603 None:intergenic 50.0%
! TGGTGATGTTGTGCTGGATG+TGG - chr8_1:77286879-77286898 Msa1215870:intron 50.0%
!! TGTCCAACGCTTTGAGTTGC+CGG + chr8_1:77286977-77286996 None:intergenic 50.0%
ACTGCCTCTTGAAACCTCAC+TGG - chr8_1:77287315-77287334 Msa1215870:five_prime_UTR 50.0%
GACTCCAGTGAGGTTTCAAG+AGG + chr8_1:77287322-77287341 None:intergenic 50.0%
! ATGGGGTGTTCTTGTTCTGG+AGG + chr8_1:77285419-77285438 None:intergenic 50.0%
GATGCTAGAGATGTGATCGC+AGG - chr8_1:77285667-77285686 Msa1215870:CDS 50.0%
! AAGGAGCAGCTTCGGTTTTC+GGG - chr8_1:77285827-77285846 Msa1215870:CDS 50.0%
!! CTTTCCTTTGCTGGTTTCGG+AGG + chr8_1:77285952-77285971 None:intergenic 50.0%
!! CCGCTTTCCTTTGCTGGTTT+CGG + chr8_1:77285955-77285974 None:intergenic 50.0%
CCGAAACCAGCAAAGGAAAG+CGG - chr8_1:77285952-77285971 Msa1215870:intron 50.0%
AAACCAGCAAAGGAAAGCGG+TGG - chr8_1:77285955-77285974 Msa1215870:intron 50.0%
GAGCATAGAGAGGGAAATGG+CGG - chr8_1:77286021-77286040 Msa1215870:intron 50.0%
ATAGAGAGGGAAATGGCGGT+GGG - chr8_1:77286025-77286044 Msa1215870:intron 50.0%
! GGGTCTGAGGTAGAACAAAG+AGG - chr8_1:77286045-77286064 Msa1215870:intron 50.0%
TTGCGCTGCTAAGTTCTGTC+TGG + chr8_1:77286584-77286603 None:intergenic 50.0%
! TGGTGATGTTGTGCTGGATG+TGG - chr8_1:77286879-77286898 Msa1215870:intron 50.0%
!! TGTCCAACGCTTTGAGTTGC+CGG + chr8_1:77286977-77286996 None:intergenic 50.0%
ACTGCCTCTTGAAACCTCAC+TGG - chr8_1:77287315-77287334 Msa1215870:five_prime_UTR 50.0%
GACTCCAGTGAGGTTTCAAG+AGG + chr8_1:77287322-77287341 None:intergenic 50.0%
TGAGCCTCCGAAACCAGCAA+AGG - chr8_1:77285945-77285964 Msa1215870:intron 55.0%
CATAGAGAGGGAAATGGCGG+TGG - chr8_1:77286024-77286043 Msa1215870:intron 55.0%
TGTCCGGCAACTCAAAGCGT+TGG - chr8_1:77286971-77286990 Msa1215870:intron 55.0%
TGAGCCTCCGAAACCAGCAA+AGG - chr8_1:77285945-77285964 Msa1215870:intron 55.0%
CATAGAGAGGGAAATGGCGG+TGG - chr8_1:77286024-77286043 Msa1215870:intron 55.0%
TGTCCGGCAACTCAAAGCGT+TGG - chr8_1:77286971-77286990 Msa1215870:intron 55.0%
CCACCACCGCTTTCCTTTGC+TGG + chr8_1:77285961-77285980 None:intergenic 60.0%
CCAGCAAAGGAAAGCGGTGG+TGG - chr8_1:77285958-77285977 Msa1215870:intron 60.0%
CCACCACCGCTTTCCTTTGC+TGG + chr8_1:77285961-77285980 None:intergenic 60.0%
CCAGCAAAGGAAAGCGGTGG+TGG - chr8_1:77285958-77285977 Msa1215870:intron 60.0%
! GCGGTGGTGGTTCGTCGAAG+AGG - chr8_1:77285971-77285990 Msa1215870:intron 65.0%
GGGAAATGGCGGTGGGTCTG+AGG - chr8_1:77286032-77286051 Msa1215870:intron 65.0%
! GCGGTGGTGGTTCGTCGAAG+AGG - chr8_1:77285971-77285990 Msa1215870:intron 65.0%
GGGAAATGGCGGTGGGTCTG+AGG - chr8_1:77286032-77286051 Msa1215870:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 77285039 77287406 77285039 ID=Msa1215870;Name=Msa1215870
chr8_1 mRNA 77285039 77287406 77285039 ID=Msa1215870-mRNA-1;Parent=Msa1215870;Name=Msa1215870-mRNA-1;_AED=0.08;_eAED=0.08;_QI=104|1|1|1|1|1|5|293|485
chr8_1 exon 77285039 77285584 77285039 ID=Msa1215870-mRNA-1:exon:26659;Parent=Msa1215870-mRNA-1
chr8_1 exon 77285666 77285737 77285666 ID=Msa1215870-mRNA-1:exon:26658;Parent=Msa1215870-mRNA-1
chr8_1 exon 77285823 77285902 77285823 ID=Msa1215870-mRNA-1:exon:26657;Parent=Msa1215870-mRNA-1
chr8_1 exon 77286146 77286871 77286146 ID=Msa1215870-mRNA-1:exon:26656;Parent=Msa1215870-mRNA-1
chr8_1 exon 77286976 77287406 77286976 ID=Msa1215870-mRNA-1:exon:26655;Parent=Msa1215870-mRNA-1
chr8_1 five_prime_UTR 77287303 77287406 77287303 ID=Msa1215870-mRNA-1:five_prime_utr;Parent=Msa1215870-mRNA-1
chr8_1 CDS 77286976 77287302 77286976 ID=Msa1215870-mRNA-1:cds;Parent=Msa1215870-mRNA-1
chr8_1 CDS 77286146 77286871 77286146 ID=Msa1215870-mRNA-1:cds;Parent=Msa1215870-mRNA-1
chr8_1 CDS 77285823 77285902 77285823 ID=Msa1215870-mRNA-1:cds;Parent=Msa1215870-mRNA-1
chr8_1 CDS 77285666 77285737 77285666 ID=Msa1215870-mRNA-1:cds;Parent=Msa1215870-mRNA-1
chr8_1 CDS 77285332 77285584 77285332 ID=Msa1215870-mRNA-1:cds;Parent=Msa1215870-mRNA-1
chr8_1 three_prime_UTR 77285039 77285331 77285039 ID=Msa1215870-mRNA-1:three_prime_utr;Parent=Msa1215870-mRNA-1
Gene Sequence

>Msa1215870

ATGGTGTACTCCAACTACACACCCACTTACTACTCAACTCTTCATGATTCAATCACCTCTTTCTGCAAAACCATTCTTCCTTTCAACTTCAAAAAACGTTCTTTACCTTCTGCTGAACATAGATTGTCTAAGCTACAATCCGACAACCTTAAATGGCAACAAGACTCTTTCCACCAAGTTTTGAACTTGATGGGTCTTCACAAAGAAGGAATTGTCGCTGAAACTGAAGTTAAAGCTTTCAAAACTCACTTGCTTGAGACCCTTATTTCTTCTCCTCCAGAACAAGAACACCCCATCATAATAAGAGACAAGCTTCTGTTTTTGCAGGAACTACTTTATGCTAAGTGCATTTCTGAAGAAGATTACCATTCTTCTAAAAGGCCATTGGTGCAAAGGTTAGCAGTACAAGGAGCTAAGATTGATGCTAGAGATGTGATCGCAGGGAAATCGAAAGATGTAAAAGAGAATTCTGAAGAGGAGTGGTCTGTGATTGATTTGAAGGATGATAAGAATTTGATGAACAAGGAGAATTTGAACTCTAAGGGAAAATCAAGTCATGGATCAGCTTTGAAACAGATTAAAGGAGCAGCTTCGGTTTTCGGGTTTGTTTCTTCTAACAAGCATGAAAAGAGCATATTTGATTCACCTCCTTTGCATAAACAACAAAGTGAAGGGAAAACTATTCTTATGGAGGAAAGTGAGCCTCCGAAACCAGCAAAGGAAAGCGGTGGTGGTTCGTCGAAGAGGAAACCATTTAGGACTTTGTTTCATAAGGAGCATAGAGAGGGAAATGGCGGTGGGTCTGAGGTAGAACAAAGAGGAGGGAAATCAGTGAAAAAGCAATGGGGGTTTGATGGATTGAAGAAATGGAAGAGAAATGAATTGGATGATGATGAAACAGCTCCTTTGCCTTTGAATCAAAGATCTGATAGCGAGGCTTTCTCAGCTTCATCTCAGTCTTTTGCAAGAGCAGTTGGTGATGGGCCAGATACCAAGTTGATCAAGAAGAAGTTGCATTCTGATGGTTCCCCATCTGATTTTTTCATAGATAAGGTTTTGGGAAACAACATAAAGAAGGAGTTGTCAAGAATCCAGACAGAACTTAGCAGCGCAAACCCAAATCTTAAATTTTCGAATGATCAGATGGAAGCAATTTCTACAAGAATTCCGGTGGATAAGTCTGATTTGAAAAACTACTTCCCTAAGTCATGGTGTGACAAGTATGGTGATGTTGTGCTGGATGTGGTGAAAAAGGAATTCAAAAACCACGTTGAAGAAATGGAAAACAAGCGCAGCATTTCAAGAGAAAGACATTTGTCCGGCAACTCAAAGCGTTGGACAACATTTGATGATGATGAAAACGTTCATCCAAATCTTTTTGGTCATCAAGATAATTCGGTTCACAGTAGTAACATCAATCCATTTTCGCATGGTTATGCTGAGAGTACATGGAACTGA

Protein sequence

>Msa1215870

MVYSNYTPTYYSTLHDSITSFCKTILPFNFKKRSLPSAEHRLSKLQSDNLKWQQDSFHQVLNLMGLHKEGIVAETEVKAFKTHLLETLISSPPEQEHPIIIRDKLLFLQELLYAKCISEEDYHSSKRPLVQRLAVQGAKIDARDVIAGKSKDVKENSEEEWSVIDLKDDKNLMNKENLNSKGKSSHGSALKQIKGAASVFGFVSSNKHEKSIFDSPPLHKQQSEGKTILMEESEPPKPAKESGGGSSKRKPFRTLFHKEHREGNGGGSEVEQRGGKSVKKQWGFDGLKKWKRNELDDDETAPLPLNQRSDSEAFSASSQSFARAVGDGPDTKLIKKKLHSDGSPSDFFIDKVLGNNIKKELSRIQTELSSANPNLKFSNDQMEAISTRIPVDKSDLKNYFPKSWCDKYGDVVLDVVKKEFKNHVEEMENKRSISRERHLSGNSKRWTTFDDDENVHPNLFGHQDNSVHSSNINPFSHGYAESTWN*