AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1223390


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1223390 MtrunA17_Chr4g0074901 91.183 862 69 4 1 856 1 861 0.0 1535
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1223390 AT1G16630.1 29.562 937 421 42 20 849 34 838 1.71e-45 176
Msa1223390 AT2G16270.1 32.985 479 218 20 8 468 12 405 1.39e-39 157

Find 185 sgRNAs with CRISPR-Local

Find 223 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCTCTCAATTCAATTCTT+AGG 0.105616 8_1:+87843145 Msa1223390:five_prime_UTR
GAAAATGATGCTAAATTAAT+TGG 0.232552 8_1:+87845311 Msa1223390:CDS
ACTTCTTCGCATGGGGTTAA+TGG 0.237962 8_1:-87843337 None:intergenic
TTCCTCATAGATGGCTTATC+TGG 0.244401 8_1:-87845632 None:intergenic
ATTTCGATGGATGAGTATTT+TGG 0.246831 8_1:+87844867 Msa1223390:CDS
GTTTCTGAATTTCTTGGATT+AGG 0.259148 8_1:-87843315 None:intergenic
TCGTTCGGAATTCGCATATT+TGG 0.274234 8_1:+87844646 Msa1223390:CDS
ATTAGGAAAATGAATGAATT+AGG 0.279474 8_1:-87843218 None:intergenic
TTTCTGAATTTCTTGGATTA+GGG 0.289901 8_1:-87843314 None:intergenic
CATCCTCTGATGATTCCTTC+TGG 0.292316 8_1:-87844311 None:intergenic
GTTGATACTGGTTCATTAGA+TGG 0.302929 8_1:+87843811 Msa1223390:CDS
TGGTTGCTCCAACAAAATTC+TGG 0.312423 8_1:+87846218 Msa1223390:three_prime_UTR
TCTAATTCCATTAGCGGCTT+TGG 0.321351 8_1:-87844219 None:intergenic
GATCATCAGCCCTTGGTGTT+TGG 0.344027 8_1:-87845208 None:intergenic
GAATCATTGTTTGGAATCAT+AGG 0.348843 8_1:-87843952 None:intergenic
TTATGAGTCTTCTGAACTTT+CGG 0.349539 8_1:+87844563 Msa1223390:CDS
TTAATGGTTTCTGAATTTCT+TGG 0.349999 8_1:-87843321 None:intergenic
GGGTTTGATGAATTTGAAAC+TGG 0.350216 8_1:-87843294 None:intergenic
AGAACAACTTCAGCATGATA+TGG 0.356822 8_1:+87844923 Msa1223390:CDS
GTGTGAGAGAAACTAGATCT+AGG 0.366345 8_1:-87843405 None:intergenic
TTACAAACCAAAGCCGCTAA+TGG 0.368219 8_1:+87844212 Msa1223390:CDS
GGTCGCGGTGAAAATAAAAT+AGG 0.371380 8_1:+87844801 Msa1223390:CDS
CGTCGGTGACATGAAATTCT+TGG 0.371498 8_1:-87843659 None:intergenic
GACACAGATGCTGCAATTAG+AGG 0.373147 8_1:+87845422 Msa1223390:CDS
CTGATCCTTTAGAACAGAAA+AGG 0.377539 8_1:+87843788 Msa1223390:CDS
TTTCTGAACAAAGTCCTGTT+AGG 0.378281 8_1:+87844373 Msa1223390:CDS
TTGTCCTCAGATCCAATCTT+AGG 0.380737 8_1:-87845599 None:intergenic
ATCTCTCAATTCAATTCTTA+GGG 0.383836 8_1:+87843146 Msa1223390:five_prime_UTR
ATGAGCAGGTTAGGTGATGT+AGG 0.388906 8_1:-87846068 None:intergenic
GAGTTGATTTCAGATGTTAG+AGG 0.389002 8_1:+87844696 Msa1223390:CDS
AAGAAATACATTCACATTGC+AGG 0.391046 8_1:-87846102 None:intergenic
GCTGGCGATCTAACCTTTGC+CGG 0.391178 8_1:-87843619 None:intergenic
TCAAGTTAAAGTACTGCAAC+TGG 0.391552 8_1:-87844734 None:intergenic
GTTAATCAGAGTCCTATCTT+TGG 0.391685 8_1:+87844780 Msa1223390:CDS
TTAGGCGTTCAAGTAGGATT+AGG 0.395224 8_1:+87846003 Msa1223390:CDS
ACAGGCACATTCCTCATAGA+TGG 0.401315 8_1:-87845641 None:intergenic
ATCCTCTGATGATTCCTTCT+GGG 0.405286 8_1:-87844310 None:intergenic
GCCTCTTCTGACTACTCCAT+GGG 0.407211 8_1:+87845803 Msa1223390:CDS
GAACAGAAAAGGGTTGATAC+TGG 0.407790 8_1:+87843799 Msa1223390:CDS
GCAACGTGTGTTTCTTGAAC+AGG 0.414525 8_1:-87844837 None:intergenic
AAATATGCCAAGTTCAAATT+CGG 0.415242 8_1:+87845235 Msa1223390:CDS
ATCTCAGCAACTTCTGAAAC+TGG 0.416066 8_1:-87845365 None:intergenic
GCATTAGCAGTGTAAGAAAC+TGG 0.418494 8_1:-87844102 None:intergenic
ACCAGTTGCAAAGCCTGCTC+TGG 0.418548 8_1:-87845158 None:intergenic
GAGGACAGTTTCATTATGTC+AGG 0.419021 8_1:+87844240 Msa1223390:CDS
ACCAGAGCAGGCTTTGCAAC+TGG 0.419706 8_1:+87845157 Msa1223390:CDS
TTCTGATGAAACTGTGAAGC+AGG 0.425432 8_1:+87844338 Msa1223390:CDS
AAAGCCGCTAATGGAATTAG+AGG 0.426519 8_1:+87844221 Msa1223390:CDS
GCGGCTTTGGTTTGTAATGA+AGG 0.426809 8_1:-87844206 None:intergenic
ATTGAATTGAAAGAAAGATT+AGG 0.429553 8_1:-87843235 None:intergenic
CGCGGGCCAATCTACTACTT+TGG 0.432526 8_1:+87845130 Msa1223390:CDS
ATCCTACTTGAACGCCTAAC+CGG 0.435617 8_1:-87845999 None:intergenic
AAAATGAATGAATTAGGAAA+TGG 0.436029 8_1:-87843212 None:intergenic
GGCCTCTTCTGACTACTCCA+TGG 0.438649 8_1:+87845802 Msa1223390:CDS
AAAAGATCAGTTTATGAAAC+CGG 0.441090 8_1:+87843600 Msa1223390:CDS
TGAACATTTAGATGCAAAGT+TGG 0.442587 8_1:+87845049 Msa1223390:CDS
CTGTCCTCTAATTCCATTAG+CGG 0.445999 8_1:-87844225 None:intergenic
GAACAACTTCAGCATGATAT+GGG 0.446308 8_1:+87844924 Msa1223390:CDS
TCTGGCAAGAGAGTCCTAAC+AGG 0.449217 8_1:-87844387 None:intergenic
ATTTCAATCACAAATTCTCC+AGG 0.449988 8_1:+87844507 Msa1223390:CDS
ATGAGGGAAGGTTTAGAGAA+TGG 0.450468 8_1:-87843372 None:intergenic
GAGGAATGTGCCTGTAGAAA+TGG 0.458705 8_1:+87845649 Msa1223390:CDS
TCCTCATAGATGGCTTATCT+GGG 0.459174 8_1:-87845631 None:intergenic
CTATACTTGCTGCTTTGTGC+AGG 0.459222 8_1:+87845491 Msa1223390:CDS
ACTCTCTCCTGTGGTAATTC+CGG 0.462561 8_1:-87845775 None:intergenic
ACTGGAGGAGTAGCCGCGGC+TGG 0.464928 8_1:-87844084 None:intergenic
CAAGATACCTGAAGGACTAT+TGG 0.465612 8_1:-87843433 None:intergenic
CGGTGACTCAGCCATCTTGA+AGG 0.465883 8_1:-87843692 None:intergenic
CCGACAACAAAATTCATGTT+CGG 0.467578 8_1:+87843752 Msa1223390:CDS
TGAATTTCCGAATTTGAACT+TGG 0.469755 8_1:-87845242 None:intergenic
TCCAGGGTCTCATGCTGTGT+TGG 0.473321 8_1:+87844524 Msa1223390:CDS
TAATGAAGGAATTGTGGCCT+AGG 0.475030 8_1:-87844192 None:intergenic
CCTGAGAAACTTCTTCGCAT+GGG 0.479169 8_1:-87843345 None:intergenic
CACTGGATTTGAAAATGCAT+TGG 0.480475 8_1:+87844953 Msa1223390:CDS
TGAGTCCAATGTTGTTCCTA+TGG 0.481899 8_1:+87843894 Msa1223390:CDS
TGATCCTTTAGAACAGAAAA+GGG 0.482946 8_1:+87843789 Msa1223390:CDS
ACTCCCGCCAATAGTCCTTC+AGG 0.484257 8_1:+87843426 Msa1223390:CDS
GTTCTACCAAAGTAGTAGAT+TGG 0.488968 8_1:-87845136 None:intergenic
TGCAAAGTTATGAGCAGGTT+AGG 0.491503 8_1:-87846077 None:intergenic
CCAACCACGTCCATTTCTAC+AGG 0.492594 8_1:-87845659 None:intergenic
CTTGCTGCTTTGTGCAGGTA+CGG 0.493645 8_1:+87845496 Msa1223390:CDS
CATGATATGGGGATGAACAC+TGG 0.495085 8_1:+87844936 Msa1223390:CDS
TCCATGGGTTCACCATCCTA+TGG 0.496368 8_1:+87845818 Msa1223390:CDS
CAAAATGAAGTCTGTGGTGA+AGG 0.500187 8_1:+87845263 Msa1223390:CDS
GTTGATTTCGATGTTGCAGC+TGG 0.500852 8_1:-87843637 None:intergenic
TCCTGAGAAACTTCTTCGCA+TGG 0.501589 8_1:-87843346 None:intergenic
TCTGATTCTATATAAGTAGC+AGG 0.505688 8_1:-87845011 None:intergenic
TTGATACTGGTTCATTAGAT+GGG 0.506576 8_1:+87843812 Msa1223390:CDS
CCCATGCGAAGAAGTTTCTC+AGG 0.514117 8_1:+87843345 Msa1223390:CDS
GCTGGACTAAGCTTAAAAGT+AGG 0.515924 8_1:-87844066 None:intergenic
CAGCTGATATTCCCACTGCT+TGG 0.516834 8_1:-87845400 None:intergenic
GAATCATTGTTTCTAATCAA+AGG 0.517302 8_1:-87844024 None:intergenic
CAGACTCACAACTCGGAAAG+AGG 0.517493 8_1:-87843846 None:intergenic
TTATATAGAATCAGAAGAGC+AGG 0.518245 8_1:+87845019 Msa1223390:CDS
TCAAAGCTGCTCATTTCTGA+AGG 0.519677 8_1:-87845692 None:intergenic
TGAAGATGCTTTAGAGTCTG+AGG 0.522367 8_1:+87845100 Msa1223390:CDS
AGAGAAAACAGTTGAAGCAA+AGG 0.522792 8_1:+87844407 Msa1223390:CDS
TGCCACTTCTCCTGTATAAG+CGG 0.524540 8_1:+87846031 Msa1223390:exon
AATGAATTAGGAAATGGAAG+TGG 0.532901 8_1:-87843206 None:intergenic
GGAATTGTGGCCTAGGGGAT+AGG 0.532945 8_1:-87844185 None:intergenic
AGCATCAACAAGAGTGTCTA+CGG 0.533829 8_1:-87844124 None:intergenic
AAGATTGAGAAATGAAGAGA+AGG 0.534368 8_1:-87843118 None:intergenic
AGGTATGCAAAGTTATGAGC+AGG 0.535750 8_1:-87846082 None:intergenic
TCTAGGGTTAGCGGCAATGA+GGG 0.540403 8_1:-87843388 None:intergenic
TTGATGAATTTGAAACTGGA+GGG 0.540624 8_1:-87843290 None:intergenic
TGATGAATTTGAAACTGGAG+GGG 0.545019 8_1:-87843289 None:intergenic
GGTTTGTAATGAAGGAATTG+TGG 0.549064 8_1:-87844198 None:intergenic
TTCATCAGACTGAGTATCCT+CGG 0.550240 8_1:-87844286 None:intergenic
GATACCTGAAGGACTATTGG+CGG 0.551436 8_1:-87843430 None:intergenic
AGGAGATAGTTACTCCGGTT+AGG 0.555208 8_1:+87845985 Msa1223390:CDS
TGTGAGAGAAACTAGATCTA+GGG 0.557213 8_1:-87843404 None:intergenic
ATCTGAAATCAACTCAGAGA+TGG 0.558056 8_1:-87844688 None:intergenic
GGGGATTTGTCGTTGTTGAG+AGG 0.558491 8_1:-87843270 None:intergenic
GAAACTAGATCTAGGGTTAG+CGG 0.559957 8_1:-87843397 None:intergenic
TCTGTGGAGAAGCCTAAGAT+TGG 0.560840 8_1:+87845587 Msa1223390:CDS
TCCATAGGATGGTGAACCCA+TGG 0.561266 8_1:-87845819 None:intergenic
TTTGATGAATTTGAAACTGG+AGG 0.561812 8_1:-87843291 None:intergenic
CTGGACTAAGCTTAAAAGTA+GGG 0.562564 8_1:-87844065 None:intergenic
TACTTTGGTAGAACCAGAGC+AGG 0.564168 8_1:+87845145 Msa1223390:CDS
AGGCAATGTAGATACAAAGC+TGG 0.568950 8_1:+87845283 Msa1223390:CDS
ATACACTGTTAGACTTCCAT+AGG 0.569824 8_1:-87845834 None:intergenic
AATGAAGGAATTGTGGCCTA+GGG 0.570744 8_1:-87844191 None:intergenic
TCAGTTTATGAAACCGGCAA+AGG 0.571045 8_1:+87843606 Msa1223390:CDS
ATCATCCATAGGAACAACAT+TGG 0.571602 8_1:-87843899 None:intergenic
TGAACTTTCGGAGTTTGCAA+AGG 0.572896 8_1:+87844575 Msa1223390:CDS
TTTATAGGGACGCGGCGAAG+AGG 0.574213 8_1:+87845965 Msa1223390:intron
CAACAAAATTCATGTTCGGA+AGG 0.575732 8_1:+87843756 Msa1223390:CDS
AGAATCTGAGGAAGTGCACA+AGG 0.576915 8_1:+87844983 Msa1223390:CDS
TTACCACAGGAGAGAGTCGT+TGG 0.578772 8_1:+87845781 Msa1223390:CDS
CTGAGAAACTTCTTCGCATG+GGG 0.580112 8_1:-87843344 None:intergenic
AGAGTCTGAGGAAGCACTCG+CGG 0.581478 8_1:+87845112 Msa1223390:CDS
CCTGTAGAAATGGACGTGGT+TGG 0.581689 8_1:+87845659 Msa1223390:CDS
GAAGCCTAAGATTGGATCTG+AGG 0.582716 8_1:+87845595 Msa1223390:CDS
GAGTCTGAGGAAGCACTCGC+GGG 0.584357 8_1:+87845113 Msa1223390:CDS
ATACCTGAAGGACTATTGGC+GGG 0.584843 8_1:-87843429 None:intergenic
TCCAACACAGCATGAGACCC+TGG 0.586313 8_1:-87844525 None:intergenic
ACACAGATGCTGCAATTAGA+GGG 0.588423 8_1:+87845423 Msa1223390:CDS
GGGTTAGCGGCAATGAGGGA+AGG 0.589585 8_1:-87843384 None:intergenic
CAGAGTCCTATCTTTGGTCG+CGG 0.593626 8_1:+87844786 Msa1223390:CDS
CAAAGCTGCTCATTTCTGAA+GGG 0.594529 8_1:-87845691 None:intergenic
GATCTCTGCTTCCTTCAAGA+TGG 0.595344 8_1:+87843681 Msa1223390:CDS
TAAGCTTAAAAGTAGGGTCA+AGG 0.597364 8_1:-87844059 None:intergenic
GAATCAGTATTATACTCAGA+AGG 0.598677 8_1:+87845182 Msa1223390:CDS
AACCGCTTATACAGGAGAAG+TGG 0.600502 8_1:-87846033 None:intergenic
AAGAGAAGGTGTGACTGTAA+CGG 0.600705 8_1:-87843104 None:intergenic
AAACAAATTACCTATCCCCT+AGG 0.602260 8_1:+87844175 Msa1223390:CDS
ATCTAGGGTTAGCGGCAATG+AGG 0.603945 8_1:-87843389 None:intergenic
CCCCAGATAAGCCATCTATG+AGG 0.606478 8_1:+87845630 Msa1223390:CDS
ACGTGTGTTTCTTGAACAGG+AGG 0.607471 8_1:-87844834 None:intergenic
CAAGTTAAAGTACTGCAACT+GGG 0.609993 8_1:-87844733 None:intergenic
AAAAGCGCCGGAATTACCAC+AGG 0.610343 8_1:+87845768 Msa1223390:CDS
AAATCTTCAGACTCACAACT+CGG 0.613094 8_1:-87843853 None:intergenic
CGTTGCCTCAGAGATTTCGA+TGG 0.613875 8_1:+87844854 Msa1223390:CDS
ACTGTTAGACTTCCATAGGA+TGG 0.619498 8_1:-87845830 None:intergenic
GAAATTCAAAATGAAGTCTG+TGG 0.622812 8_1:+87845257 Msa1223390:CDS
TTTCAATCACAAATTCTCCA+GGG 0.626416 8_1:+87844508 Msa1223390:CDS
AAGGCTCGTTCCTCTCGGCA+AGG 0.627881 8_1:-87843726 None:intergenic
GGAAGAAGGCTCGTTCCTCT+CGG 0.628493 8_1:-87843731 None:intergenic
CGAAGAGGAGATAGTTACTC+CGG 0.635705 8_1:+87845980 Msa1223390:CDS
ACCCATGGAGTAGTCAGAAG+AGG 0.635753 8_1:-87845804 None:intergenic
AGTGTATGAGAAAATTCCAA+AGG 0.637812 8_1:+87845850 Msa1223390:CDS
CTCCGGTTAGGCGTTCAAGT+AGG 0.639790 8_1:+87845997 Msa1223390:CDS
ATTGGATGCTCAAGAATCTG+AGG 0.642965 8_1:+87844971 Msa1223390:CDS
TCAGTCTGATGAATCCCAGA+AGG 0.647686 8_1:+87844296 Msa1223390:CDS
AACAACTTCAGCATGATATG+GGG 0.647874 8_1:+87844925 Msa1223390:CDS
TTCGATCTCAAAGAAAAGCG+TGG 0.648845 8_1:-87844441 None:intergenic
TTGAAGGAAGCAGAGATCGT+CGG 0.654068 8_1:-87843676 None:intergenic
TTCAGATACAGATGTTACCG+AGG 0.656226 8_1:+87844269 Msa1223390:CDS
CTCATCCATCGAAATCTCTG+AGG 0.661658 8_1:-87844859 None:intergenic
CACACGGATGACCAAGCAGT+GGG 0.663869 8_1:+87845389 Msa1223390:CDS
ATCCCAGAAGGAATCATCAG+AGG 0.664059 8_1:+87844308 Msa1223390:CDS
AGAAGGAAACCAAACACCAA+GGG 0.665063 8_1:+87845199 Msa1223390:CDS
CCTCATAGATGGCTTATCTG+GGG 0.670344 8_1:-87845630 None:intergenic
CAGAAGGAAACCAAACACCA+AGG 0.677611 8_1:+87845198 Msa1223390:CDS
GAAAGAAAATCCTTGCCGAG+AGG 0.682912 8_1:+87843716 Msa1223390:CDS
AGAAACTGGAGGAGTAGCCG+CGG 0.691010 8_1:-87844088 None:intergenic
ACACACGGATGACCAAGCAG+TGG 0.696307 8_1:+87845388 Msa1223390:CDS
AGGCCAACGACTCTCTCCTG+TGG 0.696396 8_1:-87845784 None:intergenic
ATGAAGGAATTGTGGCCTAG+GGG 0.699302 8_1:-87844190 None:intergenic
AGAAGTTGCTGAGATACACA+CGG 0.700965 8_1:+87845373 Msa1223390:CDS
TGTGCCTGTAGAAATGGACG+TGG 0.719113 8_1:+87845655 Msa1223390:CDS
TTAGCAGTGTAAGAAACTGG+AGG 0.719518 8_1:-87844099 None:intergenic
CGTGTGTTTCTTGAACAGGA+GGG 0.721446 8_1:-87844833 None:intergenic
GAATCTGAGGAAGTGCACAA+GGG 0.732128 8_1:+87844984 Msa1223390:CDS
AGGGTCATAAGGTGGCACAG+AGG 0.740482 8_1:-87844151 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATTTTTTATGTATTAATTT+TGG + chr8_1:87843517-87843536 Msa1223390:intron 10.0%
!!! TATTTTTTATTAATGAATGA+TGG + chr8_1:87846198-87846217 Msa1223390:three_prime_UTR 10.0%
!!! TTCATCATATTGTTTTTTAT+AGG + chr8_1:87845950-87845969 Msa1223390:intron 15.0%
!!! TCATCATATTGTTTTTTATA+GGG + chr8_1:87845951-87845970 Msa1223390:intron 15.0%
!! AAAATGAATGAATTAGGAAA+TGG - chr8_1:87843215-87843234 None:intergenic 20.0%
!! ATTAGGAAAATGAATGAATT+AGG - chr8_1:87843221-87843240 None:intergenic 20.0%
!! ATTGAATTGAAAGAAAGATT+AGG - chr8_1:87843238-87843257 None:intergenic 20.0%
!! ATTTCAAATTTAATCTGTGT+TGG + chr8_1:87843495-87843514 Msa1223390:intron 20.0%
!! GAAAATGATGCTAAATTAAT+TGG + chr8_1:87845311-87845330 Msa1223390:CDS 20.0%
! AATCTCTCAATTCAATTCTT+AGG + chr8_1:87843145-87843164 Msa1223390:five_prime_UTR 25.0%
! ATCTCTCAATTCAATTCTTA+GGG + chr8_1:87843146-87843165 Msa1223390:five_prime_UTR 25.0%
! TTTCTGAATTTCTTGGATTA+GGG - chr8_1:87843317-87843336 None:intergenic 25.0%
! TTAATGGTTTCTGAATTTCT+TGG - chr8_1:87843324-87843343 None:intergenic 25.0%
! AAAAGATCAGTTTATGAAAC+CGG + chr8_1:87843600-87843619 Msa1223390:CDS 25.0%
! GAAAAATCTGAATCATTGTT+TGG - chr8_1:87843964-87843983 None:intergenic 25.0%
!!! AAAGGAACATTTTGAAATGA+GGG - chr8_1:87844009-87844028 None:intergenic 25.0%
!!! GAATCATTGTTTCTAATCAA+AGG - chr8_1:87844027-87844046 None:intergenic 25.0%
!!! TAATTTGTTTTAGGGTCATA+AGG - chr8_1:87844165-87844184 None:intergenic 25.0%
!!! AAAATTTGCTTTTGCAAACT+GGG - chr8_1:87844619-87844638 None:intergenic 25.0%
! AAATATGCCAAGTTCAAATT+CGG + chr8_1:87845235-87845254 Msa1223390:CDS 25.0%
AAGATTGAGAAATGAAGAGA+AGG - chr8_1:87843121-87843140 None:intergenic 30.0%
AATGAATTAGGAAATGGAAG+TGG - chr8_1:87843209-87843228 None:intergenic 30.0%
! TTGATGAATTTGAAACTGGA+GGG - chr8_1:87843293-87843312 None:intergenic 30.0%
! TTTGATGAATTTGAAACTGG+AGG - chr8_1:87843294-87843313 None:intergenic 30.0%
GTTTCTGAATTTCTTGGATT+AGG - chr8_1:87843318-87843337 None:intergenic 30.0%
TCACATTAATCGCAAATTGA+AGG - chr8_1:87843461-87843480 None:intergenic 30.0%
!! TGATCCTTTAGAACAGAAAA+GGG + chr8_1:87843789-87843808 Msa1223390:CDS 30.0%
!! TTGATACTGGTTCATTAGAT+GGG + chr8_1:87843812-87843831 Msa1223390:CDS 30.0%
TCAAACGAAAAATCATCCAT+AGG - chr8_1:87843913-87843932 None:intergenic 30.0%
! GAATCATTGTTTGGAATCAT+AGG - chr8_1:87843955-87843974 None:intergenic 30.0%
!!! CAAAGGAACATTTTGAAATG+AGG - chr8_1:87844010-87844029 None:intergenic 30.0%
!!! GGGATAGGTAATTTGTTTTA+GGG - chr8_1:87844173-87844192 None:intergenic 30.0%
ATTTCAATCACAAATTCTCC+AGG + chr8_1:87844507-87844526 Msa1223390:CDS 30.0%
TTTCAATCACAAATTCTCCA+GGG + chr8_1:87844508-87844527 Msa1223390:CDS 30.0%
TTATGAGTCTTCTGAACTTT+CGG + chr8_1:87844563-87844582 Msa1223390:CDS 30.0%
!! CAAAATTTGCTTTTGCAAAC+TGG - chr8_1:87844620-87844639 None:intergenic 30.0%
! TTTGCAAAAGCAAATTTTGC+AGG + chr8_1:87844621-87844640 Msa1223390:CDS 30.0%
! ATTTCGATGGATGAGTATTT+TGG + chr8_1:87844867-87844886 Msa1223390:CDS 30.0%
TCTGATTCTATATAAGTAGC+AGG - chr8_1:87845014-87845033 None:intergenic 30.0%
TTATATAGAATCAGAAGAGC+AGG + chr8_1:87845019-87845038 Msa1223390:CDS 30.0%
TGAACATTTAGATGCAAAGT+TGG + chr8_1:87845049-87845068 Msa1223390:CDS 30.0%
GAATCAGTATTATACTCAGA+AGG + chr8_1:87845182-87845201 Msa1223390:CDS 30.0%
TGAATTTCCGAATTTGAACT+TGG - chr8_1:87845245-87845264 None:intergenic 30.0%
GAAATTCAAAATGAAGTCTG+TGG + chr8_1:87845257-87845276 Msa1223390:CDS 30.0%
! AAGTATAGCACAATGTTTTG+AGG - chr8_1:87845479-87845498 None:intergenic 30.0%
AGTGTATGAGAAAATTCCAA+AGG + chr8_1:87845850-87845869 Msa1223390:CDS 30.0%
!!! TATTGTTTTTTATAGGGACG+CGG + chr8_1:87845957-87845976 Msa1223390:intron 30.0%
AAGAAATACATTCACATTGC+AGG - chr8_1:87846105-87846124 None:intergenic 30.0%
! TGATGAATTTGAAACTGGAG+GGG - chr8_1:87843292-87843311 None:intergenic 35.0%
! GGGTTTGATGAATTTGAAAC+TGG - chr8_1:87843297-87843316 None:intergenic 35.0%
TGTGAGAGAAACTAGATCTA+GGG - chr8_1:87843407-87843426 None:intergenic 35.0%
!! TGAATTTTGTTGTCGGAAGA+AGG - chr8_1:87843748-87843767 None:intergenic 35.0%
!! CCGAACATGAATTTTGTTGT+CGG - chr8_1:87843755-87843774 None:intergenic 35.0%
CCGACAACAAAATTCATGTT+CGG + chr8_1:87843752-87843771 Msa1223390:CDS 35.0%
CAACAAAATTCATGTTCGGA+AGG + chr8_1:87843756-87843775 Msa1223390:CDS 35.0%
!! CTGATCCTTTAGAACAGAAA+AGG + chr8_1:87843788-87843807 Msa1223390:CDS 35.0%
! TCAACCCTTTTCTGTTCTAA+AGG - chr8_1:87843796-87843815 None:intergenic 35.0%
!! GTTGATACTGGTTCATTAGA+TGG + chr8_1:87843811-87843830 Msa1223390:CDS 35.0%
AAATCTTCAGACTCACAACT+CGG - chr8_1:87843856-87843875 None:intergenic 35.0%
ATCATCCATAGGAACAACAT+TGG - chr8_1:87843902-87843921 None:intergenic 35.0%
TAAGCTTAAAAGTAGGGTCA+AGG - chr8_1:87844062-87844081 None:intergenic 35.0%
CTGGACTAAGCTTAAAAGTA+GGG - chr8_1:87844068-87844087 None:intergenic 35.0%
!!! TTTGTTTTAGGGTCATAAGG+TGG - chr8_1:87844162-87844181 None:intergenic 35.0%
!!! GGGGATAGGTAATTTGTTTT+AGG - chr8_1:87844174-87844193 None:intergenic 35.0%
AAACAAATTACCTATCCCCT+AGG + chr8_1:87844175-87844194 Msa1223390:CDS 35.0%
GGTTTGTAATGAAGGAATTG+TGG - chr8_1:87844201-87844220 None:intergenic 35.0%
TTTCTGAACAAAGTCCTGTT+AGG + chr8_1:87844373-87844392 Msa1223390:CDS 35.0%
! TTTGCTTCAACTGTTTTCTC+TGG - chr8_1:87844408-87844427 None:intergenic 35.0%
AGAGAAAACAGTTGAAGCAA+AGG + chr8_1:87844407-87844426 Msa1223390:CDS 35.0%
! TGTGTTGGAAGACTTTTATG+AGG + chr8_1:87844539-87844558 Msa1223390:CDS 35.0%
! CAAATTTTGCAGGTTTCGTT+CGG + chr8_1:87844631-87844650 Msa1223390:CDS 35.0%
! ATCTGAAATCAACTCAGAGA+TGG - chr8_1:87844691-87844710 None:intergenic 35.0%
! GAGTTGATTTCAGATGTTAG+AGG + chr8_1:87844696-87844715 Msa1223390:CDS 35.0%
!! CAAGTTAAAGTACTGCAACT+GGG - chr8_1:87844736-87844755 None:intergenic 35.0%
!! TCAAGTTAAAGTACTGCAAC+TGG - chr8_1:87844737-87844756 None:intergenic 35.0%
GTTAATCAGAGTCCTATCTT+TGG + chr8_1:87844780-87844799 Msa1223390:CDS 35.0%
AGAACAACTTCAGCATGATA+TGG + chr8_1:87844923-87844942 Msa1223390:CDS 35.0%
GAACAACTTCAGCATGATAT+GGG + chr8_1:87844924-87844943 Msa1223390:CDS 35.0%
AACAACTTCAGCATGATATG+GGG + chr8_1:87844925-87844944 Msa1223390:CDS 35.0%
CACTGGATTTGAAAATGCAT+TGG + chr8_1:87844953-87844972 Msa1223390:CDS 35.0%
GTTCTACCAAAGTAGTAGAT+TGG - chr8_1:87845139-87845158 None:intergenic 35.0%
!! CAAAAAGTTTACTAGCTCTG+TGG + chr8_1:87845571-87845590 Msa1223390:CDS 35.0%
ATACACTGTTAGACTTCCAT+AGG - chr8_1:87845837-87845856 None:intergenic 35.0%
CAATCAACAATACTCACCTT+TGG - chr8_1:87845869-87845888 None:intergenic 35.0%
ATGAGGGAAGGTTTAGAGAA+TGG - chr8_1:87843375-87843394 None:intergenic 40.0%
! GAAACTAGATCTAGGGTTAG+CGG - chr8_1:87843400-87843419 None:intergenic 40.0%
GTGTGAGAGAAACTAGATCT+AGG - chr8_1:87843408-87843427 None:intergenic 40.0%
CAAGATACCTGAAGGACTAT+TGG - chr8_1:87843436-87843455 None:intergenic 40.0%
TGAAGGAACAAGATACCTGA+AGG - chr8_1:87843444-87843463 None:intergenic 40.0%
TCAGTTTATGAAACCGGCAA+AGG + chr8_1:87843606-87843625 Msa1223390:CDS 40.0%
! TCGGCAAGGATTTTCTTTCT+CGG - chr8_1:87843715-87843734 None:intergenic 40.0%
!! GAACAGAAAAGGGTTGATAC+TGG + chr8_1:87843799-87843818 Msa1223390:CDS 40.0%
TGAGTCCAATGTTGTTCCTA+TGG + chr8_1:87843894-87843913 Msa1223390:CDS 40.0%
GCTGGACTAAGCTTAAAAGT+AGG - chr8_1:87844069-87844088 None:intergenic 40.0%
TTAGCAGTGTAAGAAACTGG+AGG - chr8_1:87844102-87844121 None:intergenic 40.0%
GCATTAGCAGTGTAAGAAAC+TGG - chr8_1:87844105-87844124 None:intergenic 40.0%
!! AGCATCAACAAGAGTGTCTA+CGG - chr8_1:87844127-87844146 None:intergenic 40.0%
AATGAAGGAATTGTGGCCTA+GGG - chr8_1:87844194-87844213 None:intergenic 40.0%
TAATGAAGGAATTGTGGCCT+AGG - chr8_1:87844195-87844214 None:intergenic 40.0%
TTACAAACCAAAGCCGCTAA+TGG + chr8_1:87844212-87844231 Msa1223390:CDS 40.0%
TCTAATTCCATTAGCGGCTT+TGG - chr8_1:87844222-87844241 None:intergenic 40.0%
AAAGCCGCTAATGGAATTAG+AGG + chr8_1:87844221-87844240 Msa1223390:CDS 40.0%
CTGTCCTCTAATTCCATTAG+CGG - chr8_1:87844228-87844247 None:intergenic 40.0%
GAGGACAGTTTCATTATGTC+AGG + chr8_1:87844240-87844259 Msa1223390:CDS 40.0%
TTCAGATACAGATGTTACCG+AGG + chr8_1:87844269-87844288 Msa1223390:CDS 40.0%
TTCATCAGACTGAGTATCCT+CGG - chr8_1:87844289-87844308 None:intergenic 40.0%
ATCCTCTGATGATTCCTTCT+GGG - chr8_1:87844313-87844332 None:intergenic 40.0%
TTCTGATGAAACTGTGAAGC+AGG + chr8_1:87844338-87844357 Msa1223390:CDS 40.0%
TTCGATCTCAAAGAAAAGCG+TGG - chr8_1:87844444-87844463 None:intergenic 40.0%
!!! ACGCTTTTCTTTGAGATCGA+AGG + chr8_1:87844443-87844462 Msa1223390:CDS 40.0%
TGAACTTTCGGAGTTTGCAA+AGG + chr8_1:87844575-87844594 Msa1223390:CDS 40.0%
TCGTTCGGAATTCGCATATT+TGG + chr8_1:87844646-87844665 Msa1223390:CDS 40.0%
GGTCGCGGTGAAAATAAAAT+AGG + chr8_1:87844801-87844820 Msa1223390:CDS 40.0%
ATTGGATGCTCAAGAATCTG+AGG + chr8_1:87844971-87844990 Msa1223390:CDS 40.0%
!! TGAAGATGCTTTAGAGTCTG+AGG + chr8_1:87845100-87845119 Msa1223390:CDS 40.0%
AGAAGGAAACCAAACACCAA+GGG + chr8_1:87845199-87845218 Msa1223390:CDS 40.0%
! TTTTCATGATCATCAGCCCT+TGG - chr8_1:87845218-87845237 None:intergenic 40.0%
CAAAATGAAGTCTGTGGTGA+AGG + chr8_1:87845263-87845282 Msa1223390:CDS 40.0%
AGGCAATGTAGATACAAAGC+TGG + chr8_1:87845283-87845302 Msa1223390:CDS 40.0%
!! ATCTCAGCAACTTCTGAAAC+TGG - chr8_1:87845368-87845387 None:intergenic 40.0%
AGAAGTTGCTGAGATACACA+CGG + chr8_1:87845373-87845392 Msa1223390:CDS 40.0%
ACACAGATGCTGCAATTAGA+GGG + chr8_1:87845423-87845442 Msa1223390:CDS 40.0%
! TTGCAGGTGCAACTTTTAAC+TGG + chr8_1:87845525-87845544 Msa1223390:CDS 40.0%
!! GTGCAACTTTTAACTGGTCA+AGG + chr8_1:87845531-87845550 Msa1223390:CDS 40.0%
TTGTCCTCAGATCCAATCTT+AGG - chr8_1:87845602-87845621 None:intergenic 40.0%
TCCTCATAGATGGCTTATCT+GGG - chr8_1:87845634-87845653 None:intergenic 40.0%
TTCCTCATAGATGGCTTATC+TGG - chr8_1:87845635-87845654 None:intergenic 40.0%
CAAAGCTGCTCATTTCTGAA+GGG - chr8_1:87845694-87845713 None:intergenic 40.0%
TCAAAGCTGCTCATTTCTGA+AGG - chr8_1:87845695-87845714 None:intergenic 40.0%
ACTGTTAGACTTCCATAGGA+TGG - chr8_1:87845833-87845852 None:intergenic 40.0%
TTAGGCGTTCAAGTAGGATT+AGG + chr8_1:87846003-87846022 Msa1223390:CDS 40.0%
TGCAAAGTTATGAGCAGGTT+AGG - chr8_1:87846080-87846099 None:intergenic 40.0%
AGGTATGCAAAGTTATGAGC+AGG - chr8_1:87846085-87846104 None:intergenic 40.0%
ACTTCTTCGCATGGGGTTAA+TGG - chr8_1:87843340-87843359 None:intergenic 45.0%
CTGAGAAACTTCTTCGCATG+GGG - chr8_1:87843347-87843366 None:intergenic 45.0%
CCTGAGAAACTTCTTCGCAT+GGG - chr8_1:87843348-87843367 None:intergenic 45.0%
TCCTGAGAAACTTCTTCGCA+TGG - chr8_1:87843349-87843368 None:intergenic 45.0%
ATACCTGAAGGACTATTGGC+GGG - chr8_1:87843432-87843451 None:intergenic 45.0%
GATACCTGAAGGACTATTGG+CGG - chr8_1:87843433-87843452 None:intergenic 45.0%
! GTTGATTTCGATGTTGCAGC+TGG - chr8_1:87843640-87843659 None:intergenic 45.0%
CGTCGGTGACATGAAATTCT+TGG - chr8_1:87843662-87843681 None:intergenic 45.0%
TTGAAGGAAGCAGAGATCGT+CGG - chr8_1:87843679-87843698 None:intergenic 45.0%
GATCTCTGCTTCCTTCAAGA+TGG + chr8_1:87843681-87843700 Msa1223390:CDS 45.0%
GAAAGAAAATCCTTGCCGAG+AGG + chr8_1:87843716-87843735 Msa1223390:CDS 45.0%
! TTTTAAGCTTAGTCCAGCCG+CGG + chr8_1:87844071-87844090 Msa1223390:CDS 45.0%
ATGAAGGAATTGTGGCCTAG+GGG - chr8_1:87844193-87844212 None:intergenic 45.0%
!! GCGGCTTTGGTTTGTAATGA+AGG - chr8_1:87844209-87844228 None:intergenic 45.0%
TCAGTCTGATGAATCCCAGA+AGG + chr8_1:87844296-87844315 Msa1223390:CDS 45.0%
ATCCCAGAAGGAATCATCAG+AGG + chr8_1:87844308-87844327 Msa1223390:CDS 45.0%
CATCCTCTGATGATTCCTTC+TGG - chr8_1:87844314-87844333 None:intergenic 45.0%
! TTTTCACCGCGACCAAAGAT+AGG - chr8_1:87844795-87844814 None:intergenic 45.0%
CGTGTGTTTCTTGAACAGGA+GGG - chr8_1:87844836-87844855 None:intergenic 45.0%
ACGTGTGTTTCTTGAACAGG+AGG - chr8_1:87844837-87844856 None:intergenic 45.0%
GCAACGTGTGTTTCTTGAAC+AGG - chr8_1:87844840-87844859 None:intergenic 45.0%
CTCATCCATCGAAATCTCTG+AGG - chr8_1:87844862-87844881 None:intergenic 45.0%
CATGATATGGGGATGAACAC+TGG + chr8_1:87844936-87844955 Msa1223390:CDS 45.0%
! AGAATCTGAGGAAGTGCACA+AGG + chr8_1:87844983-87845002 Msa1223390:CDS 45.0%
! GAATCTGAGGAAGTGCACAA+GGG + chr8_1:87844984-87845003 Msa1223390:CDS 45.0%
TACTTTGGTAGAACCAGAGC+AGG + chr8_1:87845145-87845164 Msa1223390:CDS 45.0%
CAGAAGGAAACCAAACACCA+AGG + chr8_1:87845198-87845217 Msa1223390:CDS 45.0%
GACACAGATGCTGCAATTAG+AGG + chr8_1:87845422-87845441 Msa1223390:CDS 45.0%
!! CTATACTTGCTGCTTTGTGC+AGG + chr8_1:87845491-87845510 Msa1223390:CDS 45.0%
! GCAGGTACGGTTTTTATTGC+AGG + chr8_1:87845509-87845528 Msa1223390:CDS 45.0%
TCTGTGGAGAAGCCTAAGAT+TGG + chr8_1:87845587-87845606 Msa1223390:CDS 45.0%
GAAGCCTAAGATTGGATCTG+AGG + chr8_1:87845595-87845614 Msa1223390:CDS 45.0%
CCTCATAGATGGCTTATCTG+GGG - chr8_1:87845633-87845652 None:intergenic 45.0%
ACAGGCACATTCCTCATAGA+TGG - chr8_1:87845644-87845663 None:intergenic 45.0%
GAGGAATGTGCCTGTAGAAA+TGG + chr8_1:87845649-87845668 Msa1223390:CDS 45.0%
ACTCTCTCCTGTGGTAATTC+CGG - chr8_1:87845778-87845797 None:intergenic 45.0%
CGAAGAGGAGATAGTTACTC+CGG + chr8_1:87845980-87845999 Msa1223390:CDS 45.0%
AGGAGATAGTTACTCCGGTT+AGG + chr8_1:87845985-87846004 Msa1223390:CDS 45.0%
ATCCTACTTGAACGCCTAAC+CGG - chr8_1:87846002-87846021 None:intergenic 45.0%
! TGCCACTTCTCCTGTATAAG+CGG + chr8_1:87846031-87846050 Msa1223390:exon 45.0%
AACCGCTTATACAGGAGAAG+TGG - chr8_1:87846036-87846055 None:intergenic 45.0%
CCAGCAAAAACCGCTTATAC+AGG - chr8_1:87846044-87846063 None:intergenic 45.0%
! CCTGTATAAGCGGTTTTTGC+TGG + chr8_1:87846041-87846060 Msa1223390:exon 45.0%
ATGAGCAGGTTAGGTGATGT+AGG - chr8_1:87846071-87846090 None:intergenic 45.0%
GGGGATTTGTCGTTGTTGAG+AGG - chr8_1:87843273-87843292 None:intergenic 50.0%
CCCATGCGAAGAAGTTTCTC+AGG + chr8_1:87843345-87843364 Msa1223390:CDS 50.0%
! TCTAGGGTTAGCGGCAATGA+GGG - chr8_1:87843391-87843410 None:intergenic 50.0%
! ATCTAGGGTTAGCGGCAATG+AGG - chr8_1:87843392-87843411 None:intergenic 50.0%
CAGACTCACAACTCGGAAAG+AGG - chr8_1:87843849-87843868 None:intergenic 50.0%
TCTGGCAAGAGAGTCCTAAC+AGG - chr8_1:87844390-87844409 None:intergenic 50.0%
CAGAGTCCTATCTTTGGTCG+CGG + chr8_1:87844786-87844805 Msa1223390:CDS 50.0%
CGTTGCCTCAGAGATTTCGA+TGG + chr8_1:87844854-87844873 Msa1223390:CDS 50.0%
!! GATCATCAGCCCTTGGTGTT+TGG - chr8_1:87845211-87845230 None:intergenic 50.0%
CAGCTGATATTCCCACTGCT+TGG - chr8_1:87845403-87845422 None:intergenic 50.0%
!! CTTGCTGCTTTGTGCAGGTA+CGG + chr8_1:87845496-87845515 Msa1223390:CDS 50.0%
CCCCAGATAAGCCATCTATG+AGG + chr8_1:87845630-87845649 Msa1223390:CDS 50.0%
TGTGCCTGTAGAAATGGACG+TGG + chr8_1:87845655-87845674 Msa1223390:CDS 50.0%
CCAACCACGTCCATTTCTAC+AGG - chr8_1:87845662-87845681 None:intergenic 50.0%
CCTGTAGAAATGGACGTGGT+TGG + chr8_1:87845659-87845678 Msa1223390:CDS 50.0%
!! AAAAGCGCCGGAATTACCAC+AGG + chr8_1:87845768-87845787 Msa1223390:CDS 50.0%
TTACCACAGGAGAGAGTCGT+TGG + chr8_1:87845781-87845800 Msa1223390:CDS 50.0%
GCCTCTTCTGACTACTCCAT+GGG + chr8_1:87845803-87845822 Msa1223390:CDS 50.0%
ACCCATGGAGTAGTCAGAAG+AGG - chr8_1:87845807-87845826 None:intergenic 50.0%
TCCATGGGTTCACCATCCTA+TGG + chr8_1:87845818-87845837 Msa1223390:CDS 50.0%
TCCATAGGATGGTGAACCCA+TGG - chr8_1:87845822-87845841 None:intergenic 50.0%
ACTCCCGCCAATAGTCCTTC+AGG + chr8_1:87843426-87843445 Msa1223390:CDS 55.0%
GCTGGCGATCTAACCTTTGC+CGG - chr8_1:87843622-87843641 None:intergenic 55.0%
CGGTGACTCAGCCATCTTGA+AGG - chr8_1:87843695-87843714 None:intergenic 55.0%
GGAAGAAGGCTCGTTCCTCT+CGG - chr8_1:87843734-87843753 None:intergenic 55.0%
AGAAACTGGAGGAGTAGCCG+CGG - chr8_1:87844091-87844110 None:intergenic 55.0%
AGGGTCATAAGGTGGCACAG+AGG - chr8_1:87844154-87844173 None:intergenic 55.0%
GGAATTGTGGCCTAGGGGAT+AGG - chr8_1:87844188-87844207 None:intergenic 55.0%
TCCAGGGTCTCATGCTGTGT+TGG + chr8_1:87844524-87844543 Msa1223390:CDS 55.0%
TCCAACACAGCATGAGACCC+TGG - chr8_1:87844528-87844547 None:intergenic 55.0%
!! AGAGTCTGAGGAAGCACTCG+CGG + chr8_1:87845112-87845131 Msa1223390:CDS 55.0%
CGCGGGCCAATCTACTACTT+TGG + chr8_1:87845130-87845149 Msa1223390:CDS 55.0%
ACCAGAGCAGGCTTTGCAAC+TGG + chr8_1:87845157-87845176 Msa1223390:CDS 55.0%
ACCAGTTGCAAAGCCTGCTC+TGG - chr8_1:87845161-87845180 None:intergenic 55.0%
ACACACGGATGACCAAGCAG+TGG + chr8_1:87845388-87845407 Msa1223390:CDS 55.0%
CACACGGATGACCAAGCAGT+GGG + chr8_1:87845389-87845408 Msa1223390:CDS 55.0%
! CCAGCGTAGAGAAAAAGCGC+CGG + chr8_1:87845756-87845775 Msa1223390:CDS 55.0%
GGCCTCTTCTGACTACTCCA+TGG + chr8_1:87845802-87845821 Msa1223390:CDS 55.0%
TTTATAGGGACGCGGCGAAG+AGG + chr8_1:87845965-87845984 Msa1223390:intron 55.0%
CTCCGGTTAGGCGTTCAAGT+AGG + chr8_1:87845997-87846016 Msa1223390:CDS 55.0%
! GGGTTAGCGGCAATGAGGGA+AGG - chr8_1:87843387-87843406 None:intergenic 60.0%
AAGGCTCGTTCCTCTCGGCA+AGG - chr8_1:87843729-87843748 None:intergenic 60.0%
!! GAGTCTGAGGAAGCACTCGC+GGG + chr8_1:87845113-87845132 Msa1223390:CDS 60.0%
!!! CCGGCGCTTTTTCTCTACGC+TGG - chr8_1:87845759-87845778 None:intergenic 60.0%
AGGCCAACGACTCTCTCCTG+TGG - chr8_1:87845787-87845806 None:intergenic 60.0%
ACTGGAGGAGTAGCCGCGGC+TGG - chr8_1:87844087-87844106 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 87843107 87846240 87843107 ID=Msa1223390;Name=Msa1223390
chr8_1 mRNA 87843107 87846240 87843107 ID=Msa1223390-mRNA-1;Parent=Msa1223390;Name=Msa1223390-mRNA-1;_AED=0.00;_eAED=0.00;_QI=160|1|1|1|1|1|3|191|856
chr8_1 exon 87843107 87843447 87843107 ID=Msa1223390-mRNA-1:exon:31785;Parent=Msa1223390-mRNA-1
chr8_1 exon 87843560 87845871 87843560 ID=Msa1223390-mRNA-1:exon:31786;Parent=Msa1223390-mRNA-1
chr8_1 exon 87845972 87846240 87845972 ID=Msa1223390-mRNA-1:exon:31787;Parent=Msa1223390-mRNA-1
chr8_1 five_prime_UTR 87843107 87843266 87843107 ID=Msa1223390-mRNA-1:five_prime_utr;Parent=Msa1223390-mRNA-1
chr8_1 CDS 87843267 87843447 87843267 ID=Msa1223390-mRNA-1:cds;Parent=Msa1223390-mRNA-1
chr8_1 CDS 87843560 87845871 87843560 ID=Msa1223390-mRNA-1:cds;Parent=Msa1223390-mRNA-1
chr8_1 CDS 87845972 87846049 87845972 ID=Msa1223390-mRNA-1:cds;Parent=Msa1223390-mRNA-1
chr8_1 three_prime_UTR 87846050 87846240 87846050 ID=Msa1223390-mRNA-1:three_prime_utr;Parent=Msa1223390-mRNA-1
Gene Sequence

>Msa1223390

ATGCCTCTCAACAACGACAAATCCCCTCCAGTTTCAAATTCATCAAACCCTAATCCAAGAAATTCAGAAACCATTAACCCCATGCGAAGAAGTTTCTCAGGAAATCCATTCTCTAAACCTTCCCTCATTGCCGCTAACCCTAGATCTAGTTTCTCTCACACTCCCGCCAATAGTCCTTCAGATTTTTCAAGAAAAAGCTTTGTTGATGACAAAGAAAACACAAAAGATCAGTTTATGAAACCGGCAAAGGTTAGATCGCCAGCTGCAACATCGAAATCAACCAAGAATTTCATGTCACCGACGATCTCTGCTTCCTTCAAGATGGCTGAGTCACCGAGAAAGAAAATCCTTGCCGAGAGGAACGAGCCTTCTTCCGACAACAAAATTCATGTTCGGAAGGTAACTTTTTCTGATCCTTTAGAACAGAAAAGGGTTGATACTGGTTCATTAGATGGGAATAGTAGAGTCCTCTTTCCGAGTTGTGAGTCTGAAGATTTGAGTGATGAAAATTTGTCTGAGTCCAATGTTGTTCCTATGGATGATTTTTCGTTTGATGCTATGCATATGAATGTTCCTATGATTCCAAACAATGATTCAGATTTTTCATTTGAAACTGTGCTCACTGAACCCTCATTTCAAAATGTTCCTTTGATTAGAAACAATGATTCAGATTTTGTTAACCTTGACCCTACTTTTAAGCTTAGTCCAGCCGCGGCTACTCCTCCAGTTTCTTACACTGCTAATGCCGTAGACACTCTTGTTGATGCTGATTCCTCTGTGCCACCTTATGACCCTAAAACAAATTACCTATCCCCTAGGCCACAATTCCTTCATTACAAACCAAAGCCGCTAATGGAATTAGAGGACAGTTTCATTATGTCAGGAAACTTTTCAGATACAGATGTTACCGAGGATACTCAGTCTGATGAATCCCAGAAGGAATCATCAGAGGATGTTTCTTCTGATGAAACTGTGAAGCAGGAAGATGATCAAATTTCTGAACAAAGTCCTGTTAGGACTCTCTTGCCAGAGAAAACAGTTGAAGCAAAGGAGCTGCAAAAACCACGCTTTTCTTTGAGATCGAAGGCTGCTGTTCTAATTTTGCTTCTGTCAATTGCTTTTGTATCAATTTCAATCACAAATTCTCCAGGGTCTCATGCTGTGTTGGAAGACTTTTATGAGGCTTATGAGTCTTCTGAACTTTCGGAGTTTGCAAAGGCTAACTTTGATCAATTCTCCCAGTTTGCAAAAGCAAATTTTGCAGGTTTCGTTCGGAATTCGCATATTTGGTATACTAAGTCGCTGTCTTCCATCTCTGAGTTGATTTCAGATGTTAGAGGAGTGCGTAATTTGTCCCAGTTGCAGTACTTTAACTTGACTGTGCTGCACGACTATAGTGCAGTTAATCAGAGTCCTATCTTTGGTCGCGGTGAAAATAAAATAGGCGACACTCGCCCTCCTGTTCAAGAAACACACGTTGCCTCAGAGATTTCGATGGATGAGTATTTTGGTGATATTTCAGCAGAGCATTATGAAGTATATGAAGAACAACTTCAGCATGATATGGGGATGAACACTGGATTTGAAAATGCATTGGATGCTCAAGAATCTGAGGAAGTGCACAAGGGACAACCTGCTACTTATATAGAATCAGAAGAGCAGGCTGAACATGAACATTTAGATGCAAAGTTGGAAGAAGAAATTGATGCTAGCTTTGAAGTTGAAGATGCTTTAGAGTCTGAGGAAGCACTCGCGGGCCAATCTACTACTTTGGTAGAACCAGAGCAGGCTTTGCAACTGGTTGAATCAGTATTATACTCAGAAGGAAACCAAACACCAAGGGCTGATGATCATGAAAATATGCCAAGTTCAAATTCGGAAATTCAAAATGAAGTCTGTGGTGAAGGCAATGTAGATACAAAGCTGGAACAAGAAAATGATGCTAAATTAATTGGCAAAGAAAGTGATGCTGATCTCAAGCATTCACCAGTTTCAGAAGTTGCTGAGATACACACGGATGACCAAGCAGTGGGAATATCAGCTGACACAGATGCTGCAATTAGAGGGAATGAGCAGCTATTAGAAGCAACTCACATTCCTCAAAACATTGTGCTATACTTGCTGCTTTGTGCAGGTACGGTTTTTATTGCAGGTGCAACTTTTAACTGGTCAAGGAAAGTTAAAAGCAGAAGCAAAAAGTTTACTAGCTCTGTGGAGAAGCCTAAGATTGGATCTGAGGACAAGAAGATTTCCCCAGATAAGCCATCTATGAGGAATGTGCCTGTAGAAATGGACGTGGTTGGAGAATCGTGCCCTTCAGAAATGAGCAGCTTTGAGAAGAGCTCATCTAACAGAGTGAATCATTTGAGTGAAGCTACCAGCGTAGAGAAAAAGCGCCGGAATTACCACAGGAGAGAGTCGTTGGCCTCTTCTGACTACTCCATGGGTTCACCATCCTATGGAAGTCTAACAGTGTATGAGAAAATTCCAAAGGGACGCGGCGAAGAGGAGATAGTTACTCCGGTTAGGCGTTCAAGTAGGATTAGGAGCATTGCCACTTCTCCTGTATAA

Protein sequence

>Msa1223390

MPLNNDKSPPVSNSSNPNPRNSETINPMRRSFSGNPFSKPSLIAANPRSSFSHTPANSPSDFSRKSFVDDKENTKDQFMKPAKVRSPAATSKSTKNFMSPTISASFKMAESPRKKILAERNEPSSDNKIHVRKVTFSDPLEQKRVDTGSLDGNSRVLFPSCESEDLSDENLSESNVVPMDDFSFDAMHMNVPMIPNNDSDFSFETVLTEPSFQNVPLIRNNDSDFVNLDPTFKLSPAAATPPVSYTANAVDTLVDADSSVPPYDPKTNYLSPRPQFLHYKPKPLMELEDSFIMSGNFSDTDVTEDTQSDESQKESSEDVSSDETVKQEDDQISEQSPVRTLLPEKTVEAKELQKPRFSLRSKAAVLILLLSIAFVSISITNSPGSHAVLEDFYEAYESSELSEFAKANFDQFSQFAKANFAGFVRNSHIWYTKSLSSISELISDVRGVRNLSQLQYFNLTVLHDYSAVNQSPIFGRGENKIGDTRPPVQETHVASEISMDEYFGDISAEHYEVYEEQLQHDMGMNTGFENALDAQESEEVHKGQPATYIESEEQAEHEHLDAKLEEEIDASFEVEDALESEEALAGQSTTLVEPEQALQLVESVLYSEGNQTPRADDHENMPSSNSEIQNEVCGEGNVDTKLEQENDAKLIGKESDADLKHSPVSEVAEIHTDDQAVGISADTDAAIRGNEQLLEATHIPQNIVLYLLLCAGTVFIAGATFNWSRKVKSRSKKFTSSVEKPKIGSEDKKISPDKPSMRNVPVEMDVVGESCPSEMSSFEKSSSNRVNHLSEATSVEKKRRNYHRRESLASSDYSMGSPSYGSLTVYEKIPKGRGEEEIVTPVRRSSRIRSIATSPV*