AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1445120


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1445120 MtrunA17_Chr5g0433181 95.255 548 13 5 1 543 1 540 0.0 1029
Msa1445120 MtrunA17_Chr3g0109071 43.178 579 192 20 1 534 1 487 1.46e-81 268
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1445120 AT5G37010.1 36.395 588 230 25 1 540 1 492 1.17e-56 201
Msa1445120 AT1G65710.1 37.474 483 152 19 80 543 56 407 1.26e-47 172

Find 114 sgRNAs with CRISPR-Local

Find 304 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATGGTGAAATGGGGTTTA+AGG 0.156691 tig0030941:-44029 None:intergenic
TCATGATCATTTACAACTTC+TGG 0.158367 tig0030941:-44269 None:intergenic
CTAAGAGGGTTTCTTCTATA+AGG 0.245007 tig0030941:-45193 None:intergenic
AACAGTAATGGTTCTGGTTC+AGG 0.276473 tig0030941:+44890 Msa1445120:CDS
AGATTAAGCAGAAGCTCTTC+TGG 0.279054 tig0030941:+44539 Msa1445120:CDS
GGAAGAAGATCTTCTGAAAA+TGG 0.284257 tig0030941:+44851 Msa1445120:CDS
ACATTCCCATTTCCTCTTGC+AGG 0.287911 tig0030941:-45106 None:intergenic
CGTTGATCTCTTTCTCTACT+TGG 0.292517 tig0030941:-44791 None:intergenic
TGTGGATAAGCAAGTGAATT+AGG 0.300136 tig0030941:-45226 None:intergenic
GAAGAAGAAGAAGCTTTCTT+TGG 0.300588 tig0030941:-44749 None:intergenic
GGTGGATTGGTTAGAGGTTC+GGG 0.304904 tig0030941:-46121 None:intergenic
TTGTACTAGGCCAGGGAAAA+TGG 0.305744 tig0030941:+44913 Msa1445120:CDS
AAAGCTTCTTCTTCTTCTAA+TGG 0.317765 tig0030941:+44755 Msa1445120:CDS
TTGAATTTCATATGAGGTAG+TGG 0.322594 tig0030941:-44002 None:intergenic
AACAATTGAAATGGTGAAAT+GGG 0.323280 tig0030941:-44037 None:intergenic
TGGTGGATTGGTTAGAGGTT+CGG 0.323939 tig0030941:-46122 None:intergenic
ATTTCACCATTTCAATTGTT+AGG 0.327114 tig0030941:+44040 Msa1445120:five_prime_UTR
CATGATCATTTACAACTTCT+GGG 0.327537 tig0030941:-44268 None:intergenic
TTGTCCCTCATTTCAACATT+TGG 0.328499 tig0030941:-45914 None:intergenic
ATGTCACCTGCAAGAGGAAA+TGG 0.328874 tig0030941:+45100 Msa1445120:CDS
ATGTCACCTGCTAGAGGAAA+TGG 0.330105 tig0030941:+45046 Msa1445120:CDS
TCTTCAGCTAGGAAATATTC+TGG 0.337380 tig0030941:+44578 Msa1445120:CDS
AAGCTTTCTTTGGTGAATTC+CGG 0.339092 tig0030941:-44739 None:intergenic
ATCATTGAACAGCAACAATA+AGG 0.348913 tig0030941:+44442 Msa1445120:CDS
CCACAATCAAATGCTAATAA+TGG 0.358815 tig0030941:+45244 Msa1445120:CDS
TACTGTTACATCATTGGTTA+TGG 0.360201 tig0030941:+44949 Msa1445120:CDS
GATTGAAGTTGAGACTATTC+AGG 0.360640 tig0030941:+45300 Msa1445120:CDS
TAACAATTGAAATGGTGAAA+TGG 0.361127 tig0030941:-44038 None:intergenic
GACAAACAGCAGAGTTACTA+TGG 0.362538 tig0030941:+45931 Msa1445120:CDS
AGTTCAGAACAAAGGCAAAA+AGG 0.367310 tig0030941:+45276 Msa1445120:CDS
GATGAACAAAAGAGAGTTCA+TGG 0.370002 tig0030941:+44659 Msa1445120:CDS
TCCTGCTACTGTTACATCAT+TGG 0.374850 tig0030941:+44943 Msa1445120:CDS
GTTTGTGGTGGATTGGTTAG+AGG 0.379183 tig0030941:-46127 None:intergenic
TGCTTAAACATGCACCCATT+TGG 0.391903 tig0030941:-44076 None:intergenic
CAGCAGAGTTACTATGGAAA+AGG 0.407916 tig0030941:+45937 Msa1445120:CDS
GTTCTGGTTCAGGTTGTACT+AGG 0.417475 tig0030941:+44900 Msa1445120:CDS
AAGTGATTTGGTGGAAGAAA+GGG 0.427395 tig0030941:-44135 None:intergenic
GTGGAGGAGATGGTGTTAAG+AGG 0.428100 tig0030941:+44987 Msa1445120:CDS
CGGAGAGTGAGTAGATCTCC+TGG 0.430572 tig0030941:+44830 Msa1445120:CDS
TAAGATCAGCAACAGCTTCA+AGG 0.433635 tig0030941:-46255 None:intergenic
GGAAATTTGAATTTCATATG+AGG 0.433900 tig0030941:-44008 None:intergenic
GTTCCATCACAACAAAATGA+TGG 0.444007 tig0030941:+44395 Msa1445120:CDS
AAGAATGTGGTGATGCCATC+AGG 0.447953 tig0030941:+46028 Msa1445120:CDS
GGTTCAGGTTGTACTAGGCC+AGG 0.450436 tig0030941:+44905 Msa1445120:CDS
GGTCACAAACACAAACCAAA+TGG 0.456343 tig0030941:+44061 Msa1445120:exon
AACAATAACAGTAATGGTTC+TGG 0.460724 tig0030941:+44884 Msa1445120:CDS
CCACACAAAGGAACAACAAC+AGG 0.462368 tig0030941:+45970 Msa1445120:CDS
AAAGTGATTTGGTGGAAGAA+AGG 0.463048 tig0030941:-44136 None:intergenic
CCTGTTGTTGTTCCTTTGTG+TGG 0.465706 tig0030941:-45988 None:intergenic
AAGGAGTAATGAAGTATATG+AGG 0.468120 tig0030941:-46149 None:intergenic
GGTTAGAGGTTCGGGATTGA+CGG 0.468774 tig0030941:-46113 None:intergenic
TTAGGATCAACTTCACTAAG+AGG 0.472460 tig0030941:-45208 None:intergenic
AGTAACAATGGTGGAGGAGA+TGG 0.473383 tig0030941:+44977 Msa1445120:CDS
TGAGGGACAACACTAGAAAC+AGG 0.475808 tig0030941:+45909 Msa1445120:CDS
CCATTCCCATTTCCTCTAGC+AGG 0.477412 tig0030941:-45052 None:intergenic
ATCAGCAACCTTCTCTTAGC+AGG 0.482494 tig0030941:+45140 Msa1445120:CDS
ATCACAACAAAATGATGGGT+TGG 0.488194 tig0030941:+44400 Msa1445120:CDS
CTTCTTCTTCTTCTAATGGA+AGG 0.491446 tig0030941:+44759 Msa1445120:CDS
TTGTGACCTAACAATTGAAA+TGG 0.493715 tig0030941:-44046 None:intergenic
ACCAATGATGTAACAGTAGC+AGG 0.497665 tig0030941:-44944 None:intergenic
GGGTGTGGAAAGTGATTTGG+TGG 0.502086 tig0030941:-44144 None:intergenic
AGCAGAGTTACTATGGAAAA+GGG 0.508430 tig0030941:+45938 Msa1445120:CDS
TGTCACCTGCAAGAGGAAAT+GGG 0.509249 tig0030941:+45101 Msa1445120:CDS
TGTCACCTGCTAGAGGAAAT+GGG 0.518324 tig0030941:+45047 Msa1445120:CDS
AATGAAGTATATGAGGTTTG+TGG 0.520058 tig0030941:-46142 None:intergenic
ATATGAGGTTTGTGGTGGAT+TGG 0.520566 tig0030941:-46134 None:intergenic
CTGCTACTTCTTCTTCAGCT+AGG 0.521567 tig0030941:+44567 Msa1445120:CDS
CCATTATTAGCATTTGATTG+TGG 0.522575 tig0030941:-45244 None:intergenic
AATAAGGTTGGTAGCGCTGT+TGG 0.523748 tig0030941:+44458 Msa1445120:CDS
CTGCTTCTTGTAATCCCTGA+TGG 0.525661 tig0030941:-46061 None:intergenic
GTCACAAACACAAACCAAAT+GGG 0.526346 tig0030941:+44062 Msa1445120:exon
CAAGCTTTGTTGAGACAAGC+TGG 0.533501 tig0030941:-46226 None:intergenic
TGGAGGAGATGGTGTTAAGA+GGG 0.534726 tig0030941:+44988 Msa1445120:CDS
TGAATTTCATATGAGGTAGT+GGG 0.538489 tig0030941:-44001 None:intergenic
ATAACCACCGTCCGCGTCAC+CGG 0.540741 tig0030941:+44720 Msa1445120:CDS
AGTGATTTGGTGGAAGAAAG+GGG 0.543930 tig0030941:-44134 None:intergenic
ACAACAACAGGAAGAGATCA+AGG 0.544746 tig0030941:+45982 Msa1445120:CDS
GATAAAAGTAACAATGGTGG+AGG 0.545003 tig0030941:+44971 Msa1445120:CDS
TTCCATCACAACAAAATGAT+GGG 0.545629 tig0030941:+44396 Msa1445120:CDS
AGAAACCAAATGTTGAAATG+AGG 0.549758 tig0030941:+45891 Msa1445120:intron
GAAACCAAATGTTGAAATGA+GGG 0.552067 tig0030941:+45892 Msa1445120:intron
GTGAATTCCGGTGACGCGGA+CGG 0.557292 tig0030941:-44727 None:intergenic
CAATCAAATGCTAATAATGG+TGG 0.560234 tig0030941:+45247 Msa1445120:CDS
TAGGATCAACTTCACTAAGA+GGG 0.561077 tig0030941:-45207 None:intergenic
TTGAACAGCAACAATAAGGT+TGG 0.562041 tig0030941:+44446 Msa1445120:CDS
AACAACAACAATAACAGTAA+TGG 0.562799 tig0030941:+44878 Msa1445120:CDS
GTTATGGATAAAAGTAACAA+TGG 0.571865 tig0030941:+44965 Msa1445120:CDS
GAGTTATTCCTGCTAAGAGA+AGG 0.573600 tig0030941:-45148 None:intergenic
AACTTTCAGATTTATTAATG+TGG 0.580678 tig0030941:-43952 None:intergenic
CGTTCAATGTCACCTGCAAG+AGG 0.592581 tig0030941:+45094 Msa1445120:CDS
TTAGCAGGAATAACTCTGCA+AGG 0.592969 tig0030941:+45155 Msa1445120:CDS
AATTCCGGTGACGCGGACGG+TGG 0.596005 tig0030941:-44724 None:intergenic
ATGAACAAAAGAGAGTTCAT+GGG 0.597175 tig0030941:+44660 Msa1445120:CDS
CCTGCTAGAGGAAATGGGAA+TGG 0.597200 tig0030941:+45052 Msa1445120:CDS
AGGAATATGATGGTGTTGCT+CGG 0.600454 tig0030941:+44696 Msa1445120:CDS
CAATGATGCAATTTCAGCTG+AGG 0.608354 tig0030941:+44637 Msa1445120:CDS
TTTGGTGAATTCCGGTGACG+CGG 0.608706 tig0030941:-44731 None:intergenic
GTTCAGGTTGTACTAGGCCA+GGG 0.608850 tig0030941:+44906 Msa1445120:CDS
ATGGATAAAAGTAACAATGG+TGG 0.618521 tig0030941:+44968 Msa1445120:CDS
GAAGTATATGAGGTTTGTGG+TGG 0.620927 tig0030941:-46139 None:intergenic
GATAACAGTGAGGAATATGA+TGG 0.621876 tig0030941:+44686 Msa1445120:CDS
ACAATTGAAATGGTGAAATG+GGG 0.623246 tig0030941:-44036 None:intergenic
CGTTCAATGTCACCTGCTAG+AGG 0.627442 tig0030941:+45040 Msa1445120:CDS
AACGTTCGAGTAGTAGAGAA+CGG 0.630171 tig0030941:+44810 Msa1445120:CDS
GGAAACAAAGTTCAGAACAA+AGG 0.631074 tig0030941:+45268 Msa1445120:CDS
GTGATTTGGTGGAAGAAAGG+GGG 0.632458 tig0030941:-44133 None:intergenic
CAAGCTGGAAGAGAAACAGA+AGG 0.639034 tig0030941:-46211 None:intergenic
ACATTGTGTTGAACAGTGAA+AGG 0.652397 tig0030941:-44374 None:intergenic
GGGTGTGAATTGCCACACAA+AGG 0.656170 tig0030941:+45958 Msa1445120:CDS
AGAATGTGGTGATGCCATCA+GGG 0.662260 tig0030941:+46029 Msa1445120:CDS
GATGCAATTCTAATTCAATG+TGG 0.677750 tig0030941:+44515 Msa1445120:CDS
CTAGCAGGTGACATTGAACG+TGG 0.678229 tig0030941:-45037 None:intergenic
TAATGCTATTGTGAAGAATG+TGG 0.688273 tig0030941:+46015 Msa1445120:CDS
TCATGGGAGTGATAACAGTG+AGG 0.744139 tig0030941:+44676 Msa1445120:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAAAAAATAAAAATTTACT+TGG - tig0030941:45415-45434 None:intergenic 10.0%
!! ACAAAAAATAAAAATTTACT+TGG - tig0030941:45415-45434 None:intergenic 10.0%
!!! ATGATAAAAATCTCTTTTTT+TGG - tig0030941:44299-44318 None:intergenic 15.0%
!! TGAAATTATAAAACAATCAT+TGG - tig0030941:45467-45486 None:intergenic 15.0%
!!! GTTTTATAATTTCATAGAAA+TGG + tig0030941:45473-45492 Msa1445120:intron 15.0%
!!! GAAATGAAATTTGAAATTAT+TGG - tig0030941:45766-45785 None:intergenic 15.0%
!! TCATTTCATAACAAAATTAA+TGG + tig0030941:45779-45798 Msa1445120:intron 15.0%
!!! ATGATAAAAATCTCTTTTTT+TGG - tig0030941:44299-44318 None:intergenic 15.0%
!! TGAAATTATAAAACAATCAT+TGG - tig0030941:45467-45486 None:intergenic 15.0%
!!! GTTTTATAATTTCATAGAAA+TGG + tig0030941:45473-45492 Msa1445120:intron 15.0%
!!! GAAATGAAATTTGAAATTAT+TGG - tig0030941:45766-45785 None:intergenic 15.0%
!! TCATTTCATAACAAAATTAA+TGG + tig0030941:45779-45798 Msa1445120:intron 15.0%
!! AACTTTCAGATTTATTAATG+TGG - tig0030941:43955-43974 None:intergenic 20.0%
!! AATATAGATAGATAATGATG+TGG + tig0030941:45388-45407 Msa1445120:intron 20.0%
!!! CATATTTTTTCTTAATCATC+CGG - tig0030941:45707-45726 None:intergenic 20.0%
!! TAAGAATGTACATAAAATGA+TGG - tig0030941:45846-45865 None:intergenic 20.0%
!! AACTTTCAGATTTATTAATG+TGG - tig0030941:43955-43974 None:intergenic 20.0%
!! AATATAGATAGATAATGATG+TGG + tig0030941:45388-45407 Msa1445120:intron 20.0%
!!! CATATTTTTTCTTAATCATC+CGG - tig0030941:45707-45726 None:intergenic 20.0%
!! TAAGAATGTACATAAAATGA+TGG - tig0030941:45846-45865 None:intergenic 20.0%
! GGAAATTTGAATTTCATATG+AGG - tig0030941:44011-44030 None:intergenic 25.0%
! AACAATTGAAATGGTGAAAT+GGG - tig0030941:44040-44059 None:intergenic 25.0%
! TAACAATTGAAATGGTGAAA+TGG - tig0030941:44041-44060 None:intergenic 25.0%
! ATTTCACCATTTCAATTGTT+AGG + tig0030941:44040-44059 Msa1445120:five_prime_UTR 25.0%
!!! TTTTCTCTCTTTTTTCATCA+TGG - tig0030941:44337-44356 None:intergenic 25.0%
! AACAACAACAATAACAGTAA+TGG + tig0030941:44878-44897 Msa1445120:CDS 25.0%
! GTTATGGATAAAAGTAACAA+TGG + tig0030941:44965-44984 Msa1445120:CDS 25.0%
! TGATTAAGGTTGAATAGTTT+CGG + tig0030941:45581-45600 Msa1445120:intron 25.0%
! GGAAATTTGAATTTCATATG+AGG - tig0030941:44011-44030 None:intergenic 25.0%
! AACAATTGAAATGGTGAAAT+GGG - tig0030941:44040-44059 None:intergenic 25.0%
! TAACAATTGAAATGGTGAAA+TGG - tig0030941:44041-44060 None:intergenic 25.0%
! ATTTCACCATTTCAATTGTT+AGG + tig0030941:44040-44059 Msa1445120:five_prime_UTR 25.0%
!!! TTTTCTCTCTTTTTTCATCA+TGG - tig0030941:44337-44356 None:intergenic 25.0%
! AACAACAACAATAACAGTAA+TGG + tig0030941:44878-44897 Msa1445120:CDS 25.0%
! GTTATGGATAAAAGTAACAA+TGG + tig0030941:44965-44984 Msa1445120:CDS 25.0%
! TGATTAAGGTTGAATAGTTT+CGG + tig0030941:45581-45600 Msa1445120:intron 25.0%
TGAATTTCATATGAGGTAGT+GGG - tig0030941:44004-44023 None:intergenic 30.0%
TTGAATTTCATATGAGGTAG+TGG - tig0030941:44005-44024 None:intergenic 30.0%
ACAATTGAAATGGTGAAATG+GGG - tig0030941:44039-44058 None:intergenic 30.0%
TTGTGACCTAACAATTGAAA+TGG - tig0030941:44049-44068 None:intergenic 30.0%
!! AGAATGTTTTTGTTGAGTTG+GGG - tig0030941:44168-44187 None:intergenic 30.0%
!! CAGAATGTTTTTGTTGAGTT+GGG - tig0030941:44169-44188 None:intergenic 30.0%
!! TCAGAATGTTTTTGTTGAGT+TGG - tig0030941:44170-44189 None:intergenic 30.0%
!!! GTTGTTTTTGTTGTTCTTGA+GGG - tig0030941:44222-44241 None:intergenic 30.0%
!!! TGTTGTTTTTGTTGTTCTTG+AGG - tig0030941:44223-44242 None:intergenic 30.0%
CATGATCATTTACAACTTCT+GGG - tig0030941:44271-44290 None:intergenic 30.0%
TCATGATCATTTACAACTTC+TGG - tig0030941:44272-44291 None:intergenic 30.0%
TTCCATCACAACAAAATGAT+GGG + tig0030941:44396-44415 Msa1445120:CDS 30.0%
ATCATTGAACAGCAACAATA+AGG + tig0030941:44442-44461 Msa1445120:CDS 30.0%
GATGCAATTCTAATTCAATG+TGG + tig0030941:44515-44534 Msa1445120:CDS 30.0%
ATGAACAAAAGAGAGTTCAT+GGG + tig0030941:44660-44679 Msa1445120:CDS 30.0%
AAAGCTTCTTCTTCTTCTAA+TGG + tig0030941:44755-44774 Msa1445120:CDS 30.0%
AACAATAACAGTAATGGTTC+TGG + tig0030941:44884-44903 Msa1445120:CDS 30.0%
! TACTGTTACATCATTGGTTA+TGG + tig0030941:44949-44968 Msa1445120:CDS 30.0%
ATGGATAAAAGTAACAATGG+TGG + tig0030941:44968-44987 Msa1445120:CDS 30.0%
CCATTATTAGCATTTGATTG+TGG - tig0030941:45247-45266 None:intergenic 30.0%
CCACAATCAAATGCTAATAA+TGG + tig0030941:45244-45263 Msa1445120:CDS 30.0%
CAATCAAATGCTAATAATGG+TGG + tig0030941:45247-45266 Msa1445120:CDS 30.0%
TGGTTAATGTGCTTTGATTA+AGG + tig0030941:45567-45586 Msa1445120:intron 30.0%
! GCTAAAAATTGTTCGAGTTA+AGG - tig0030941:45624-45643 None:intergenic 30.0%
AGAAACCAAATGTTGAAATG+AGG + tig0030941:45891-45910 Msa1445120:intron 30.0%
GAAACCAAATGTTGAAATGA+GGG + tig0030941:45892-45911 Msa1445120:intron 30.0%
TAATGCTATTGTGAAGAATG+TGG + tig0030941:46015-46034 Msa1445120:CDS 30.0%
AATGAAGTATATGAGGTTTG+TGG - tig0030941:46127-46146 None:intergenic 30.0%
AAGGAGTAATGAAGTATATG+AGG - tig0030941:46134-46153 None:intergenic 30.0%
TGAATTTCATATGAGGTAGT+GGG - tig0030941:44004-44023 None:intergenic 30.0%
TTGAATTTCATATGAGGTAG+TGG - tig0030941:44005-44024 None:intergenic 30.0%
ACAATTGAAATGGTGAAATG+GGG - tig0030941:44039-44058 None:intergenic 30.0%
TTGTGACCTAACAATTGAAA+TGG - tig0030941:44049-44068 None:intergenic 30.0%
!! AGAATGTTTTTGTTGAGTTG+GGG - tig0030941:44168-44187 None:intergenic 30.0%
!! CAGAATGTTTTTGTTGAGTT+GGG - tig0030941:44169-44188 None:intergenic 30.0%
!! TCAGAATGTTTTTGTTGAGT+TGG - tig0030941:44170-44189 None:intergenic 30.0%
!!! GTTGTTTTTGTTGTTCTTGA+GGG - tig0030941:44222-44241 None:intergenic 30.0%
!!! TGTTGTTTTTGTTGTTCTTG+AGG - tig0030941:44223-44242 None:intergenic 30.0%
CATGATCATTTACAACTTCT+GGG - tig0030941:44271-44290 None:intergenic 30.0%
TCATGATCATTTACAACTTC+TGG - tig0030941:44272-44291 None:intergenic 30.0%
TTCCATCACAACAAAATGAT+GGG + tig0030941:44396-44415 Msa1445120:CDS 30.0%
ATCATTGAACAGCAACAATA+AGG + tig0030941:44442-44461 Msa1445120:CDS 30.0%
GATGCAATTCTAATTCAATG+TGG + tig0030941:44515-44534 Msa1445120:CDS 30.0%
ATGAACAAAAGAGAGTTCAT+GGG + tig0030941:44660-44679 Msa1445120:CDS 30.0%
AAAGCTTCTTCTTCTTCTAA+TGG + tig0030941:44755-44774 Msa1445120:CDS 30.0%
AACAATAACAGTAATGGTTC+TGG + tig0030941:44884-44903 Msa1445120:CDS 30.0%
! TACTGTTACATCATTGGTTA+TGG + tig0030941:44949-44968 Msa1445120:CDS 30.0%
ATGGATAAAAGTAACAATGG+TGG + tig0030941:44968-44987 Msa1445120:CDS 30.0%
CCATTATTAGCATTTGATTG+TGG - tig0030941:45247-45266 None:intergenic 30.0%
CCACAATCAAATGCTAATAA+TGG + tig0030941:45244-45263 Msa1445120:CDS 30.0%
CAATCAAATGCTAATAATGG+TGG + tig0030941:45247-45266 Msa1445120:CDS 30.0%
TGGTTAATGTGCTTTGATTA+AGG + tig0030941:45567-45586 Msa1445120:intron 30.0%
! GCTAAAAATTGTTCGAGTTA+AGG - tig0030941:45624-45643 None:intergenic 30.0%
AGAAACCAAATGTTGAAATG+AGG + tig0030941:45891-45910 Msa1445120:intron 30.0%
GAAACCAAATGTTGAAATGA+GGG + tig0030941:45892-45911 Msa1445120:intron 30.0%
TAATGCTATTGTGAAGAATG+TGG + tig0030941:46015-46034 Msa1445120:CDS 30.0%
AATGAAGTATATGAGGTTTG+TGG - tig0030941:46127-46146 None:intergenic 30.0%
AAGGAGTAATGAAGTATATG+AGG - tig0030941:46134-46153 None:intergenic 30.0%
AAATGGTGAAATGGGGTTTA+AGG - tig0030941:44032-44051 None:intergenic 35.0%
GTCACAAACACAAACCAAAT+GGG + tig0030941:44062-44081 Msa1445120:exon 35.0%
!! AAGTGATTTGGTGGAAGAAA+GGG - tig0030941:44138-44157 None:intergenic 35.0%
!! AAAGTGATTTGGTGGAAGAA+AGG - tig0030941:44139-44158 None:intergenic 35.0%
!!! GAATGTTTTTGTTGAGTTGG+GGG - tig0030941:44167-44186 None:intergenic 35.0%
!! AGTGAAAGGTGTGATTTTGA+TGG - tig0030941:44363-44382 None:intergenic 35.0%
ACATTGTGTTGAACAGTGAA+AGG - tig0030941:44377-44396 None:intergenic 35.0%
GTTCCATCACAACAAAATGA+TGG + tig0030941:44395-44414 Msa1445120:CDS 35.0%
!! AACCCATCATTTTGTTGTGA+TGG - tig0030941:44401-44420 None:intergenic 35.0%
!! ATCACAACAAAATGATGGGT+TGG + tig0030941:44400-44419 Msa1445120:CDS 35.0%
TTGAACAGCAACAATAAGGT+TGG + tig0030941:44446-44465 Msa1445120:CDS 35.0%
TCTTCAGCTAGGAAATATTC+TGG + tig0030941:44578-44597 Msa1445120:CDS 35.0%
GATGAACAAAAGAGAGTTCA+TGG + tig0030941:44659-44678 Msa1445120:CDS 35.0%
GATAACAGTGAGGAATATGA+TGG + tig0030941:44686-44705 Msa1445120:CDS 35.0%
AAGCTTTCTTTGGTGAATTC+CGG - tig0030941:44742-44761 None:intergenic 35.0%
GAAGAAGAAGAAGCTTTCTT+TGG - tig0030941:44752-44771 None:intergenic 35.0%
CTTCTTCTTCTTCTAATGGA+AGG + tig0030941:44759-44778 Msa1445120:CDS 35.0%
! TTTTCAGAAGATCTTCTTCC+AGG - tig0030941:44851-44870 None:intergenic 35.0%
! GGAAGAAGATCTTCTGAAAA+TGG + tig0030941:44851-44870 Msa1445120:CDS 35.0%
GATAAAAGTAACAATGGTGG+AGG + tig0030941:44971-44990 Msa1445120:CDS 35.0%
CTAAGAGGGTTTCTTCTATA+AGG - tig0030941:45196-45215 None:intergenic 35.0%
TAGGATCAACTTCACTAAGA+GGG - tig0030941:45210-45229 None:intergenic 35.0%
TTAGGATCAACTTCACTAAG+AGG - tig0030941:45211-45230 None:intergenic 35.0%
TGTGGATAAGCAAGTGAATT+AGG - tig0030941:45229-45248 None:intergenic 35.0%
GGAAACAAAGTTCAGAACAA+AGG + tig0030941:45268-45287 Msa1445120:CDS 35.0%
AGTTCAGAACAAAGGCAAAA+AGG + tig0030941:45276-45295 Msa1445120:CDS 35.0%
GATTGAAGTTGAGACTATTC+AGG + tig0030941:45300-45319 Msa1445120:CDS 35.0%
ATCAAGAGTTTGAGCTTCAA+TGG + tig0030941:45547-45566 Msa1445120:intron 35.0%
TTGTCCCTCATTTCAACATT+TGG - tig0030941:45899-45918 None:intergenic 35.0%
AGCAGAGTTACTATGGAAAA+GGG + tig0030941:45938-45957 Msa1445120:CDS 35.0%
!!! GGAAGTTTTGAATGTCTTCA+AGG - tig0030941:46153-46172 None:intergenic 35.0%
! GTTGTGTTGTGTTCTTTTGA+TGG - tig0030941:46174-46193 None:intergenic 35.0%
AAATGGTGAAATGGGGTTTA+AGG - tig0030941:44032-44051 None:intergenic 35.0%
GTCACAAACACAAACCAAAT+GGG + tig0030941:44062-44081 Msa1445120:exon 35.0%
!! AAGTGATTTGGTGGAAGAAA+GGG - tig0030941:44138-44157 None:intergenic 35.0%
!! AAAGTGATTTGGTGGAAGAA+AGG - tig0030941:44139-44158 None:intergenic 35.0%
!!! GAATGTTTTTGTTGAGTTGG+GGG - tig0030941:44167-44186 None:intergenic 35.0%
!! AGTGAAAGGTGTGATTTTGA+TGG - tig0030941:44363-44382 None:intergenic 35.0%
ACATTGTGTTGAACAGTGAA+AGG - tig0030941:44377-44396 None:intergenic 35.0%
GTTCCATCACAACAAAATGA+TGG + tig0030941:44395-44414 Msa1445120:CDS 35.0%
!! AACCCATCATTTTGTTGTGA+TGG - tig0030941:44401-44420 None:intergenic 35.0%
!! ATCACAACAAAATGATGGGT+TGG + tig0030941:44400-44419 Msa1445120:CDS 35.0%
TTGAACAGCAACAATAAGGT+TGG + tig0030941:44446-44465 Msa1445120:CDS 35.0%
TCTTCAGCTAGGAAATATTC+TGG + tig0030941:44578-44597 Msa1445120:CDS 35.0%
GATGAACAAAAGAGAGTTCA+TGG + tig0030941:44659-44678 Msa1445120:CDS 35.0%
GATAACAGTGAGGAATATGA+TGG + tig0030941:44686-44705 Msa1445120:CDS 35.0%
AAGCTTTCTTTGGTGAATTC+CGG - tig0030941:44742-44761 None:intergenic 35.0%
GAAGAAGAAGAAGCTTTCTT+TGG - tig0030941:44752-44771 None:intergenic 35.0%
CTTCTTCTTCTTCTAATGGA+AGG + tig0030941:44759-44778 Msa1445120:CDS 35.0%
! TTTTCAGAAGATCTTCTTCC+AGG - tig0030941:44851-44870 None:intergenic 35.0%
! GGAAGAAGATCTTCTGAAAA+TGG + tig0030941:44851-44870 Msa1445120:CDS 35.0%
GATAAAAGTAACAATGGTGG+AGG + tig0030941:44971-44990 Msa1445120:CDS 35.0%
CTAAGAGGGTTTCTTCTATA+AGG - tig0030941:45196-45215 None:intergenic 35.0%
TAGGATCAACTTCACTAAGA+GGG - tig0030941:45210-45229 None:intergenic 35.0%
TTAGGATCAACTTCACTAAG+AGG - tig0030941:45211-45230 None:intergenic 35.0%
TGTGGATAAGCAAGTGAATT+AGG - tig0030941:45229-45248 None:intergenic 35.0%
GGAAACAAAGTTCAGAACAA+AGG + tig0030941:45268-45287 Msa1445120:CDS 35.0%
AGTTCAGAACAAAGGCAAAA+AGG + tig0030941:45276-45295 Msa1445120:CDS 35.0%
GATTGAAGTTGAGACTATTC+AGG + tig0030941:45300-45319 Msa1445120:CDS 35.0%
ATCAAGAGTTTGAGCTTCAA+TGG + tig0030941:45547-45566 Msa1445120:intron 35.0%
TTGTCCCTCATTTCAACATT+TGG - tig0030941:45899-45918 None:intergenic 35.0%
AGCAGAGTTACTATGGAAAA+GGG + tig0030941:45938-45957 Msa1445120:CDS 35.0%
!!! GGAAGTTTTGAATGTCTTCA+AGG - tig0030941:46153-46172 None:intergenic 35.0%
! GTTGTGTTGTGTTCTTTTGA+TGG - tig0030941:46174-46193 None:intergenic 35.0%
GGTCACAAACACAAACCAAA+TGG + tig0030941:44061-44080 Msa1445120:exon 40.0%
TGCTTAAACATGCACCCATT+TGG - tig0030941:44079-44098 None:intergenic 40.0%
!! AGTGATTTGGTGGAAGAAAG+GGG - tig0030941:44137-44156 None:intergenic 40.0%
AGATTAAGCAGAAGCTCTTC+TGG + tig0030941:44539-44558 Msa1445120:CDS 40.0%
CAATGATGCAATTTCAGCTG+AGG + tig0030941:44637-44656 Msa1445120:CDS 40.0%
!! AGGAATATGATGGTGTTGCT+CGG + tig0030941:44696-44715 Msa1445120:CDS 40.0%
CGTTGATCTCTTTCTCTACT+TGG - tig0030941:44794-44813 None:intergenic 40.0%
AACGTTCGAGTAGTAGAGAA+CGG + tig0030941:44810-44829 Msa1445120:CDS 40.0%
!! AACAGTAATGGTTCTGGTTC+AGG + tig0030941:44890-44909 Msa1445120:CDS 40.0%
TCCTGCTACTGTTACATCAT+TGG + tig0030941:44943-44962 Msa1445120:CDS 40.0%
ACCAATGATGTAACAGTAGC+AGG - tig0030941:44947-44966 None:intergenic 40.0%
GAGTTATTCCTGCTAAGAGA+AGG - tig0030941:45151-45170 None:intergenic 40.0%
TTAGCAGGAATAACTCTGCA+AGG + tig0030941:45155-45174 Msa1445120:CDS 40.0%
! TCTTAATCATCCGGTTCTAG+CGG - tig0030941:45698-45717 None:intergenic 40.0%
! TTTGGTTTCTGCAGTGGATA+TGG - tig0030941:45881-45900 None:intergenic 40.0%
! TCAACATTTGGTTTCTGCAG+TGG - tig0030941:45887-45906 None:intergenic 40.0%
GACAAACAGCAGAGTTACTA+TGG + tig0030941:45931-45950 Msa1445120:CDS 40.0%
CAGCAGAGTTACTATGGAAA+AGG + tig0030941:45937-45956 Msa1445120:CDS 40.0%
ACAACAACAGGAAGAGATCA+AGG + tig0030941:45982-46001 Msa1445120:CDS 40.0%
!! ATATGAGGTTTGTGGTGGAT+TGG - tig0030941:46119-46138 None:intergenic 40.0%
GAAGTATATGAGGTTTGTGG+TGG - tig0030941:46124-46143 None:intergenic 40.0%
TAAGATCAGCAACAGCTTCA+AGG - tig0030941:46240-46259 None:intergenic 40.0%
GGTCACAAACACAAACCAAA+TGG + tig0030941:44061-44080 Msa1445120:exon 40.0%
TGCTTAAACATGCACCCATT+TGG - tig0030941:44079-44098 None:intergenic 40.0%
!! AGTGATTTGGTGGAAGAAAG+GGG - tig0030941:44137-44156 None:intergenic 40.0%
AGATTAAGCAGAAGCTCTTC+TGG + tig0030941:44539-44558 Msa1445120:CDS 40.0%
CAATGATGCAATTTCAGCTG+AGG + tig0030941:44637-44656 Msa1445120:CDS 40.0%
!! AGGAATATGATGGTGTTGCT+CGG + tig0030941:44696-44715 Msa1445120:CDS 40.0%
CGTTGATCTCTTTCTCTACT+TGG - tig0030941:44794-44813 None:intergenic 40.0%
AACGTTCGAGTAGTAGAGAA+CGG + tig0030941:44810-44829 Msa1445120:CDS 40.0%
!! AACAGTAATGGTTCTGGTTC+AGG + tig0030941:44890-44909 Msa1445120:CDS 40.0%
TCCTGCTACTGTTACATCAT+TGG + tig0030941:44943-44962 Msa1445120:CDS 40.0%
ACCAATGATGTAACAGTAGC+AGG - tig0030941:44947-44966 None:intergenic 40.0%
GAGTTATTCCTGCTAAGAGA+AGG - tig0030941:45151-45170 None:intergenic 40.0%
TTAGCAGGAATAACTCTGCA+AGG + tig0030941:45155-45174 Msa1445120:CDS 40.0%
! TCTTAATCATCCGGTTCTAG+CGG - tig0030941:45698-45717 None:intergenic 40.0%
! TTTGGTTTCTGCAGTGGATA+TGG - tig0030941:45881-45900 None:intergenic 40.0%
! TCAACATTTGGTTTCTGCAG+TGG - tig0030941:45887-45906 None:intergenic 40.0%
GACAAACAGCAGAGTTACTA+TGG + tig0030941:45931-45950 Msa1445120:CDS 40.0%
CAGCAGAGTTACTATGGAAA+AGG + tig0030941:45937-45956 Msa1445120:CDS 40.0%
ACAACAACAGGAAGAGATCA+AGG + tig0030941:45982-46001 Msa1445120:CDS 40.0%
!! ATATGAGGTTTGTGGTGGAT+TGG - tig0030941:46119-46138 None:intergenic 40.0%
GAAGTATATGAGGTTTGTGG+TGG - tig0030941:46124-46143 None:intergenic 40.0%
TAAGATCAGCAACAGCTTCA+AGG - tig0030941:46240-46259 None:intergenic 40.0%
!! GTGATTTGGTGGAAGAAAGG+GGG - tig0030941:44136-44155 None:intergenic 45.0%
!!! TTTTTGTTGAGTTGGGGGTG+TGG - tig0030941:44162-44181 None:intergenic 45.0%
!! AATAAGGTTGGTAGCGCTGT+TGG + tig0030941:44458-44477 Msa1445120:CDS 45.0%
! CTGCTACTTCTTCTTCAGCT+AGG + tig0030941:44567-44586 Msa1445120:CDS 45.0%
TCATGGGAGTGATAACAGTG+AGG + tig0030941:44676-44695 Msa1445120:CDS 45.0%
!! GTTCTGGTTCAGGTTGTACT+AGG + tig0030941:44900-44919 Msa1445120:CDS 45.0%
TTGTACTAGGCCAGGGAAAA+TGG + tig0030941:44913-44932 Msa1445120:CDS 45.0%
! AGTAACAATGGTGGAGGAGA+TGG + tig0030941:44977-44996 Msa1445120:CDS 45.0%
! TGGAGGAGATGGTGTTAAGA+GGG + tig0030941:44988-45007 Msa1445120:CDS 45.0%
ATGTCACCTGCTAGAGGAAA+TGG + tig0030941:45046-45065 Msa1445120:CDS 45.0%
TGTCACCTGCTAGAGGAAAT+GGG + tig0030941:45047-45066 Msa1445120:CDS 45.0%
ATGTCACCTGCAAGAGGAAA+TGG + tig0030941:45100-45119 Msa1445120:CDS 45.0%
TGTCACCTGCAAGAGGAAAT+GGG + tig0030941:45101-45120 Msa1445120:CDS 45.0%
ACATTCCCATTTCCTCTTGC+AGG - tig0030941:45109-45128 None:intergenic 45.0%
ATCAGCAACCTTCTCTTAGC+AGG + tig0030941:45140-45159 Msa1445120:CDS 45.0%
! TGATGGTGCTCAATGCTCAT+AGG - tig0030941:45829-45848 None:intergenic 45.0%
TGAGGGACAACACTAGAAAC+AGG + tig0030941:45909-45928 Msa1445120:CDS 45.0%
! CCTGTTGTTGTTCCTTTGTG+TGG - tig0030941:45973-45992 None:intergenic 45.0%
CCACACAAAGGAACAACAAC+AGG + tig0030941:45970-45989 Msa1445120:CDS 45.0%
! AAGAATGTGGTGATGCCATC+AGG + tig0030941:46028-46047 Msa1445120:CDS 45.0%
! AGAATGTGGTGATGCCATCA+GGG + tig0030941:46029-46048 Msa1445120:CDS 45.0%
CTGCTTCTTGTAATCCCTGA+TGG - tig0030941:46046-46065 None:intergenic 45.0%
!! TGGTGGATTGGTTAGAGGTT+CGG - tig0030941:46107-46126 None:intergenic 45.0%
!! GTTTGTGGTGGATTGGTTAG+AGG - tig0030941:46112-46131 None:intergenic 45.0%
CAAGCTGGAAGAGAAACAGA+AGG - tig0030941:46196-46215 None:intergenic 45.0%
!! CAAGCTTTGTTGAGACAAGC+TGG - tig0030941:46211-46230 None:intergenic 45.0%
!! GTGATTTGGTGGAAGAAAGG+GGG - tig0030941:44136-44155 None:intergenic 45.0%
!!! TTTTTGTTGAGTTGGGGGTG+TGG - tig0030941:44162-44181 None:intergenic 45.0%
!! AATAAGGTTGGTAGCGCTGT+TGG + tig0030941:44458-44477 Msa1445120:CDS 45.0%
! CTGCTACTTCTTCTTCAGCT+AGG + tig0030941:44567-44586 Msa1445120:CDS 45.0%
TCATGGGAGTGATAACAGTG+AGG + tig0030941:44676-44695 Msa1445120:CDS 45.0%
!! GTTCTGGTTCAGGTTGTACT+AGG + tig0030941:44900-44919 Msa1445120:CDS 45.0%
TTGTACTAGGCCAGGGAAAA+TGG + tig0030941:44913-44932 Msa1445120:CDS 45.0%
! AGTAACAATGGTGGAGGAGA+TGG + tig0030941:44977-44996 Msa1445120:CDS 45.0%
! TGGAGGAGATGGTGTTAAGA+GGG + tig0030941:44988-45007 Msa1445120:CDS 45.0%
ATGTCACCTGCTAGAGGAAA+TGG + tig0030941:45046-45065 Msa1445120:CDS 45.0%
TGTCACCTGCTAGAGGAAAT+GGG + tig0030941:45047-45066 Msa1445120:CDS 45.0%
ATGTCACCTGCAAGAGGAAA+TGG + tig0030941:45100-45119 Msa1445120:CDS 45.0%
TGTCACCTGCAAGAGGAAAT+GGG + tig0030941:45101-45120 Msa1445120:CDS 45.0%
ACATTCCCATTTCCTCTTGC+AGG - tig0030941:45109-45128 None:intergenic 45.0%
ATCAGCAACCTTCTCTTAGC+AGG + tig0030941:45140-45159 Msa1445120:CDS 45.0%
! TGATGGTGCTCAATGCTCAT+AGG - tig0030941:45829-45848 None:intergenic 45.0%
TGAGGGACAACACTAGAAAC+AGG + tig0030941:45909-45928 Msa1445120:CDS 45.0%
! CCTGTTGTTGTTCCTTTGTG+TGG - tig0030941:45973-45992 None:intergenic 45.0%
CCACACAAAGGAACAACAAC+AGG + tig0030941:45970-45989 Msa1445120:CDS 45.0%
! AAGAATGTGGTGATGCCATC+AGG + tig0030941:46028-46047 Msa1445120:CDS 45.0%
! AGAATGTGGTGATGCCATCA+GGG + tig0030941:46029-46048 Msa1445120:CDS 45.0%
CTGCTTCTTGTAATCCCTGA+TGG - tig0030941:46046-46065 None:intergenic 45.0%
!! TGGTGGATTGGTTAGAGGTT+CGG - tig0030941:46107-46126 None:intergenic 45.0%
!! GTTTGTGGTGGATTGGTTAG+AGG - tig0030941:46112-46131 None:intergenic 45.0%
CAAGCTGGAAGAGAAACAGA+AGG - tig0030941:46196-46215 None:intergenic 45.0%
!! CAAGCTTTGTTGAGACAAGC+TGG - tig0030941:46211-46230 None:intergenic 45.0%
! GGGTGTGGAAAGTGATTTGG+TGG - tig0030941:44147-44166 None:intergenic 50.0%
! TGGGGGTGTGGAAAGTGATT+TGG - tig0030941:44150-44169 None:intergenic 50.0%
TTTGGTGAATTCCGGTGACG+CGG - tig0030941:44734-44753 None:intergenic 50.0%
!! GTTCAGGTTGTACTAGGCCA+GGG + tig0030941:44906-44925 Msa1445120:CDS 50.0%
! GGAACAGTCACCATTTTCCC+TGG - tig0030941:44926-44945 None:intergenic 50.0%
! GTGGAGGAGATGGTGTTAAG+AGG + tig0030941:44987-45006 Msa1445120:CDS 50.0%
CTAGCAGGTGACATTGAACG+TGG - tig0030941:45040-45059 None:intergenic 50.0%
CGTTCAATGTCACCTGCTAG+AGG + tig0030941:45040-45059 Msa1445120:CDS 50.0%
CCATTCCCATTTCCTCTAGC+AGG - tig0030941:45055-45074 None:intergenic 50.0%
CCTGCTAGAGGAAATGGGAA+TGG + tig0030941:45052-45071 Msa1445120:CDS 50.0%
CGTTCAATGTCACCTGCAAG+AGG + tig0030941:45094-45113 Msa1445120:CDS 50.0%
! AATCATCCGGTTCTAGCGGA+AGG - tig0030941:45694-45713 None:intergenic 50.0%
GGGTGTGAATTGCCACACAA+AGG + tig0030941:45958-45977 Msa1445120:CDS 50.0%
GGTTAGAGGTTCGGGATTGA+CGG - tig0030941:46098-46117 None:intergenic 50.0%
!! GGTGGATTGGTTAGAGGTTC+GGG - tig0030941:46106-46125 None:intergenic 50.0%
! GGGTGTGGAAAGTGATTTGG+TGG - tig0030941:44147-44166 None:intergenic 50.0%
! TGGGGGTGTGGAAAGTGATT+TGG - tig0030941:44150-44169 None:intergenic 50.0%
TTTGGTGAATTCCGGTGACG+CGG - tig0030941:44734-44753 None:intergenic 50.0%
!! GTTCAGGTTGTACTAGGCCA+GGG + tig0030941:44906-44925 Msa1445120:CDS 50.0%
! GGAACAGTCACCATTTTCCC+TGG - tig0030941:44926-44945 None:intergenic 50.0%
! GTGGAGGAGATGGTGTTAAG+AGG + tig0030941:44987-45006 Msa1445120:CDS 50.0%
CTAGCAGGTGACATTGAACG+TGG - tig0030941:45040-45059 None:intergenic 50.0%
CGTTCAATGTCACCTGCTAG+AGG + tig0030941:45040-45059 Msa1445120:CDS 50.0%
CCATTCCCATTTCCTCTAGC+AGG - tig0030941:45055-45074 None:intergenic 50.0%
CCTGCTAGAGGAAATGGGAA+TGG + tig0030941:45052-45071 Msa1445120:CDS 50.0%
CGTTCAATGTCACCTGCAAG+AGG + tig0030941:45094-45113 Msa1445120:CDS 50.0%
! AATCATCCGGTTCTAGCGGA+AGG - tig0030941:45694-45713 None:intergenic 50.0%
GGGTGTGAATTGCCACACAA+AGG + tig0030941:45958-45977 Msa1445120:CDS 50.0%
GGTTAGAGGTTCGGGATTGA+CGG - tig0030941:46098-46117 None:intergenic 50.0%
!! GGTGGATTGGTTAGAGGTTC+GGG - tig0030941:46106-46125 None:intergenic 50.0%
CGGAGAGTGAGTAGATCTCC+TGG + tig0030941:44830-44849 Msa1445120:CDS 55.0%
!! GGTTCAGGTTGTACTAGGCC+AGG + tig0030941:44905-44924 Msa1445120:CDS 55.0%
GCTCTCGAGATAGCTCGTCT+AGG - tig0030941:45669-45688 None:intergenic 55.0%
CGGAGAGTGAGTAGATCTCC+TGG + tig0030941:44830-44849 Msa1445120:CDS 55.0%
!! GGTTCAGGTTGTACTAGGCC+AGG + tig0030941:44905-44924 Msa1445120:CDS 55.0%
GCTCTCGAGATAGCTCGTCT+AGG - tig0030941:45669-45688 None:intergenic 55.0%
! GGAAGAAAGGGGGTGTGAGG+AGG - tig0030941:44126-44145 None:intergenic 60.0%
! GGTGGAAGAAAGGGGGTGTG+AGG - tig0030941:44129-44148 None:intergenic 60.0%
ATAACCACCGTCCGCGTCAC+CGG + tig0030941:44720-44739 Msa1445120:CDS 60.0%
GTGAATTCCGGTGACGCGGA+CGG - tig0030941:44730-44749 None:intergenic 60.0%
GAGCCTCCTTCCGCTAGAAC+CGG + tig0030941:45685-45704 Msa1445120:intron 60.0%
! CATCCGGTTCTAGCGGAAGG+AGG - tig0030941:45691-45710 None:intergenic 60.0%
! GGAAGAAAGGGGGTGTGAGG+AGG - tig0030941:44126-44145 None:intergenic 60.0%
! GGTGGAAGAAAGGGGGTGTG+AGG - tig0030941:44129-44148 None:intergenic 60.0%
ATAACCACCGTCCGCGTCAC+CGG + tig0030941:44720-44739 Msa1445120:CDS 60.0%
GTGAATTCCGGTGACGCGGA+CGG - tig0030941:44730-44749 None:intergenic 60.0%
GAGCCTCCTTCCGCTAGAAC+CGG + tig0030941:45685-45704 Msa1445120:intron 60.0%
! CATCCGGTTCTAGCGGAAGG+AGG - tig0030941:45691-45710 None:intergenic 60.0%
AATTCCGGTGACGCGGACGG+TGG - tig0030941:44727-44746 None:intergenic 65.0%
AATTCCGGTGACGCGGACGG+TGG - tig0030941:44727-44746 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0030941 gene 43913 46279 43913 ID=Msa1445120;Name=Msa1445120
tig0030941 mRNA 43913 46279 43913 ID=Msa1445120-mRNA-1;Parent=Msa1445120;Name=Msa1445120-mRNA-1;_AED=0.01;_eAED=0.01;_QI=167|1|0.5|1|1|1|2|0|543
tig0030941 exon 43913 45321 43913 ID=Msa1445120-mRNA-1:exon:14803;Parent=Msa1445120-mRNA-1
tig0030941 exon 45893 46279 45893 ID=Msa1445120-mRNA-1:exon:14804;Parent=Msa1445120-mRNA-1
tig0030941 five_prime_UTR 43913 44079 43913 ID=Msa1445120-mRNA-1:five_prime_utr;Parent=Msa1445120-mRNA-1
tig0030941 CDS 44080 45321 44080 ID=Msa1445120-mRNA-1:cds;Parent=Msa1445120-mRNA-1
tig0030941 CDS 45893 46279 45893 ID=Msa1445120-mRNA-1:cds;Parent=Msa1445120-mRNA-1
Gene Sequence

>Msa1445120

ATGGGTGCATGTTTAAGCAAGAAGAAAGCTTCATCTTCTACTTCCTCCTCACACCCCCTTTCTTCCACCAAATCACTTTCCACACCCCCAACTCAACAAAAACATTCTGATAACAACAATGTTACAGAAACAGAAACTACCCTCAAGAACAACAAAAACAACATCATTGTACAAGAGAAACAACAAGACCCAGAAGTTGTAAATGATCATGAAGAACCAAAAAAAGAGATTTTTATCATCAAACATAGAAAAAGCCATGATGAAAAAAGAGAGAAAAACTCCATCAAAATCACACCTTTCACTGTTCAACACAATGTTCCATCACAACAAAATGATGGGTTGGTTTCATCTAGTGAAACAGAATCATTGAACAGCAACAATAAGGTTGGTAGCGCTGTTGGTGTGAGAACTTCAAGCTGTACTAAAGAAGAAGTTGATGCAATTCTAATTCAATGTGGAAGATTAAGCAGAAGCTCTTCTGGAAAAGCTGCTACTTCTTCTTCAGCTAGGAAATATTCTGGTTCAAAAAGAAGTTTTGATTTTGATCATTGTGATAACAATGATGCAATTTCAGCTGAGGATGAACAAAAGAGAGTTCATGGGAGTGATAACAGTGAGGAATATGATGGTGTTGCTCGGCATAACCACCGTCCGCGTCACCGGAATTCACCAAAGAAAGCTTCTTCTTCTTCTAATGGAAGGAGAAGAACACCAAGTAGAGAAAGAGATCAACGTTCGAGTAGTAGAGAACGGAGAGTGAGTAGATCTCCTGGAAGAAGATCTTCTGAAAATGGAAGCAACAACAACAATAACAGTAATGGTTCTGGTTCAGGTTGTACTAGGCCAGGGAAAATGGTGACTGTTCCTGCTACTGTTACATCATTGGTTATGGATAAAAGTAACAATGGTGGAGGAGATGGTGTTAAGAGGGTTATTGTGAAGAGAAATGTTGCATCACCACGTTCAATGTCACCTGCTAGAGGAAATGGGAATGGTTTGAATCAGCAACAGCAACGTTCAATGTCACCTGCAAGAGGAAATGGGAATGTAGTAAATCAGAATCAGCAACCTTCTCTTAGCAGGAATAACTCTGCAAGGAAAACTGAAGTTTCACCTTATAGAAGAAACCCTCTTAGTGAAGTTGATCCTAATTCACTTGCTTATCCACAATCAAATGCTAATAATGGTGGAAACAAAGTTCAGAACAAAGGCAAAAAGGAGATTGAAGTTGAGACTATTCAGAAACCAAATGTTGAAATGAGGGACAACACTAGAAACAGGACAAACAGCAGAGTTACTATGGAAAAGGGTGTGAATTGCCACACAAAGGAACAACAACAGGAAGAGATCAAGGTAATGTCTGATAATGCTATTGTGAAGAATGTGGTGATGCCATCAGGGATTACAAGAAGCAGATCATCTAGAAGATCAAGAGACTTCGACACCGTCAATCCCGAACCTCTAACCAATCCACCACAAACCTCATATACTTCATTACTCCTTGAAGACATTCAAAACTTCCATCAAAAGAACACAACACAACCTTCTGTTTCTCTTCCAGCTTGTCTCAACAAAGCTTGTTCTATCCTTGAAGCTGTTGCTGATCTTAACTCCACAACAAGTTCAACT

Protein sequence

>Msa1445120

MGACLSKKKASSSTSSSHPLSSTKSLSTPPTQQKHSDNNNVTETETTLKNNKNNIIVQEKQQDPEVVNDHEEPKKEIFIIKHRKSHDEKREKNSIKITPFTVQHNVPSQQNDGLVSSSETESLNSNNKVGSAVGVRTSSCTKEEVDAILIQCGRLSRSSSGKAATSSSARKYSGSKRSFDFDHCDNNDAISAEDEQKRVHGSDNSEEYDGVARHNHRPRHRNSPKKASSSSNGRRRTPSRERDQRSSSRERRVSRSPGRRSSENGSNNNNNSNGSGSGCTRPGKMVTVPATVTSLVMDKSNNGGGDGVKRVIVKRNVASPRSMSPARGNGNGLNQQQQRSMSPARGNGNVVNQNQQPSLSRNNSARKTEVSPYRRNPLSEVDPNSLAYPQSNANNGGNKVQNKGKKEIEVETIQKPNVEMRDNTRNRTNSRVTMEKGVNCHTKEQQQEEIKVMSDNAIVKNVVMPSGITRSRSSRRSRDFDTVNPEPLTNPPQTSYTSLLLEDIQNFHQKNTTQPSVSLPACLNKACSILEAVADLNSTTSST