AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1268630


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1268630 MtrunA17_Chr5g0401301 76.372 419 29 5 1 351 1 417 0.0 603
Msa1268630 MtrunA17_Chr3g0120401 61.728 81 29 2 268 348 162 240 1.32e-27 108
Msa1268630 MtrunA17_Chr1g0177171 41.447 152 79 4 205 348 341 490 1.14e-26 110
Msa1268630 MtrunA17_Chr1g0213651 59.259 81 31 2 269 349 282 360 4.54e-26 107
Msa1268630 MtrunA17_Chr5g0439251 51.685 89 36 2 268 350 387 474 1.70e-22 98.2
Msa1268630 MtrunA17_Chr8g0378361 56.757 74 30 2 275 348 42 113 1.41e-21 90.9
Msa1268630 MtrunA17_Chr5g0447651 55.844 77 33 1 272 348 39 114 1.00e-20 86.3
Msa1268630 MtrunA17_Chr8g0378621 51.316 76 36 1 273 348 374 448 1.04e-20 93.2
Msa1268630 MtrunA17_Chr3g0096451 38.312 154 75 5 207 348 50 195 2.60e-20 89.0
Msa1268630 MtrunA17_Chr4g0075031 52.632 76 35 1 273 348 392 466 1.73e-19 89.4
Msa1268630 MtrunA17_Chr8g0339191 50.000 72 35 1 277 348 388 458 3.52e-19 88.2
Msa1268630 MtrunA17_Chr4g0076141 52.000 75 35 1 270 344 20 93 7.88e-19 80.5
Msa1268630 MtrunA17_Chr8g0378371 53.947 76 30 3 273 348 43 113 1.31e-18 80.5
Msa1268630 MtrunA17_Chr7g0271411 50.617 81 38 2 268 348 165 243 1.54e-18 85.1
Msa1268630 MtrunA17_Chr8g0381081 50.000 80 39 1 269 348 63 141 4.78e-18 80.9
Msa1268630 MtrunA17_Chr1g0193131 59.459 74 25 4 270 342 427 496 9.96e-18 84.3
Msa1268630 MtrunA17_Chr5g0443331 48.148 81 40 2 268 348 113 191 2.07e-17 81.3
Msa1268630 MtrunA17_Chr8g0380231 55.882 68 28 2 275 342 29 94 3.46e-17 76.3
Msa1268630 MtrunA17_Chr8g0378381 46.250 80 41 2 269 348 38 115 3.52e-17 76.6
Msa1268630 MtrunA17_Chr7g0234821 48.000 75 38 1 274 348 385 458 4.83e-17 82.0
Msa1268630 MtrunA17_Chr4g0076131 45.679 81 39 2 270 348 35 112 4.90e-17 76.3
Msa1268630 MtrunA17_Chr3g0121271 46.053 76 40 1 273 348 372 446 1.50e-16 80.5
Msa1268630 MtrunA17_Chr4g0061401 51.948 77 35 2 272 348 32 106 1.73e-16 77.4
Msa1268630 MtrunA17_Chr8g0389741 46.667 75 39 1 275 349 380 453 3.62e-16 79.3
Msa1268630 MtrunA17_Chr1g0161011 47.368 76 39 1 273 348 371 445 5.99e-16 79.0
Msa1268630 MtrunA17_Chr3g0144531 23.096 394 216 13 37 348 66 454 7.52e-16 78.6
Msa1268630 MtrunA17_Chr6g0487261 46.053 76 39 2 275 349 381 455 1.43e-15 77.8
Msa1268630 MtrunA17_Chr2g0304061 50.602 83 38 3 269 351 164 243 2.36e-15 75.9
Msa1268630 MtrunA17_Chr8g0378401 48.649 74 36 2 269 342 38 109 2.47e-15 71.6
Msa1268630 MtrunA17_Chr5g0434591 44.737 76 41 1 273 348 370 444 4.09e-15 76.3
Msa1268630 MtrunA17_Chr4g0034901 43.750 80 44 1 269 348 381 459 1.51e-14 74.3
Msa1268630 MtrunA17_Chr4g0034901 31.250 160 103 3 25 179 55 212 4.19e-11 63.9
Msa1268630 MtrunA17_Chr4g0043511 44.156 77 41 2 272 348 429 503 4.40e-14 73.2
Msa1268630 MtrunA17_Chr5g0419121 45.946 74 38 2 269 342 28 99 1.73e-13 69.7
Msa1268630 MtrunA17_Chr4g0040911 44.156 77 42 1 272 348 46 121 2.56e-13 67.4
Msa1268630 MtrunA17_Chr4g0043151 43.243 74 40 2 269 342 27 98 7.50e-13 66.6
Msa1268630 MtrunA17_Chr3g0110371 42.857 77 41 2 273 348 371 445 8.33e-13 69.3
Msa1268630 MtrunA17_Chr1g0154991 42.857 77 42 2 272 348 29 103 3.66e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1268630 AT5G67460.1 41.772 395 162 16 6 351 5 380 2.18e-73 232
Msa1268630 AT5G67460.2 41.131 389 161 16 6 345 5 374 1.14e-67 218
Msa1268630 AT1G79480.1 59.259 81 31 2 268 348 316 394 8.63e-26 107
Msa1268630 AT1G79480.2 59.259 81 31 2 268 348 315 393 9.70e-26 107
Msa1268630 AT5G55180.1 60.526 76 29 1 273 348 382 456 7.06e-25 105
Msa1268630 AT2G05790.1 59.740 77 30 1 272 348 393 468 1.20e-24 104
Msa1268630 AT4G26830.2 59.494 79 31 1 270 348 378 455 4.98e-24 102
Msa1268630 AT4G26830.1 59.494 79 31 1 270 348 374 451 5.59e-24 102
Msa1268630 AT5G55180.2 64.286 70 24 1 273 342 382 450 4.81e-23 100
Msa1268630 AT2G30933.1 59.494 79 30 2 270 348 89 165 5.58e-22 93.2
Msa1268630 AT5G35740.1 49.367 79 40 0 270 348 37 115 2.28e-21 88.6
Msa1268630 AT2G30933.2 64.706 68 22 2 275 342 94 159 1.41e-20 87.8
Msa1268630 AT2G30933.3 64.706 68 22 2 275 342 94 159 1.41e-20 87.8
Msa1268630 AT2G04910.2 46.835 79 41 1 270 348 22 99 6.05e-20 84.3
Msa1268630 AT1G11820.2 51.250 80 38 1 269 348 387 465 1.15e-19 90.5
Msa1268630 AT1G11820.3 52.632 76 35 1 269 344 387 461 8.09e-19 87.8
Msa1268630 AT1G66855.1 43.750 80 44 1 269 348 32 110 1.42e-18 80.9
Msa1268630 AT2G04910.1 47.945 73 37 1 270 342 22 93 4.18e-18 79.7
Msa1268630 AT1G29380.1 56.579 76 29 3 274 348 159 231 8.19e-18 83.6
Msa1268630 AT1G29380.3 56.579 76 29 3 274 348 159 231 8.85e-18 82.4
Msa1268630 AT3G13560.4 47.500 80 41 1 272 351 371 449 1.08e-17 84.3
Msa1268630 AT3G13560.1 47.500 80 41 1 272 351 371 449 1.08e-17 84.3
Msa1268630 AT3G13560.2 47.500 80 41 1 272 351 371 449 1.08e-17 84.3
Msa1268630 AT3G13560.5 47.500 80 41 1 272 351 371 449 1.08e-17 84.3
Msa1268630 AT3G13560.3 47.500 80 41 1 272 351 371 449 1.08e-17 84.3
Msa1268630 AT4G13600.1 49.367 79 38 2 270 348 68 144 1.76e-17 80.9
Msa1268630 AT2G01630.1 48.750 80 38 2 270 348 367 444 2.83e-17 83.2
Msa1268630 AT4G05430.1 44.444 81 44 1 268 348 28 107 3.06e-17 78.2
Msa1268630 AT4G05430.3 44.444 81 44 1 268 348 53 132 3.78e-17 78.6
Msa1268630 AT3G23770.1 23.822 382 202 11 54 348 92 471 3.94e-17 82.8
Msa1268630 AT5G61130.1 49.351 77 37 2 272 348 30 104 4.12e-17 79.3
Msa1268630 AT1G18650.1 51.948 77 35 2 272 348 30 104 4.44e-17 78.6
Msa1268630 AT1G18650.2 50.000 80 38 2 269 348 27 104 5.83e-17 77.0
Msa1268630 AT1G66870.1 41.250 80 46 1 269 348 32 110 5.88e-17 76.3
Msa1268630 AT1G29380.4 58.571 70 25 3 274 342 159 225 8.59e-17 79.0
Msa1268630 AT1G29380.2 58.571 70 25 3 274 342 159 225 8.59e-17 79.0
Msa1268630 AT1G66870.2 41.250 80 46 1 269 348 59 137 9.01e-17 76.6
Msa1268630 AT2G01630.3 49.333 75 35 2 270 343 367 439 1.39e-16 80.9
Msa1268630 AT5G56590.1 44.872 78 42 1 272 349 378 454 1.53e-16 80.9
Msa1268630 AT5G56590.1 27.778 162 106 4 22 176 49 206 1.26e-12 69.3
Msa1268630 AT5G63225.1 45.000 80 42 2 267 346 29 106 8.43e-16 73.2
Msa1268630 AT4G05430.2 46.667 75 39 1 268 342 53 126 1.11e-15 73.2
Msa1268630 AT3G07320.1 48.649 74 37 1 275 348 383 455 3.28e-15 77.0
Msa1268630 AT1G09460.1 48.148 81 38 3 268 348 142 218 3.31e-15 75.9
Msa1268630 AT5G63230.1 42.683 82 45 2 267 348 30 109 3.33e-15 71.2
Msa1268630 AT4G29360.2 41.558 77 44 1 275 351 413 488 3.97e-15 77.0
Msa1268630 AT4G29360.2 29.560 159 102 3 24 176 62 216 6.97e-12 67.0
Msa1268630 AT4G29360.1 41.558 77 44 1 275 351 403 478 4.29e-15 76.6
Msa1268630 AT4G29360.1 29.560 159 102 3 24 176 52 206 7.27e-12 67.0
Msa1268630 AT5G08000.2 48.750 80 39 2 269 348 46 123 7.43e-15 73.2
Msa1268630 AT5G53610.1 40.625 96 54 2 253 348 18 110 7.58e-15 70.5
Msa1268630 AT5G08000.1 50.649 77 36 2 272 348 30 104 1.10e-14 72.4
Msa1268630 AT1G26450.1 53.226 62 27 2 275 336 32 91 3.60e-14 70.9
Msa1268630 AT1G69295.1 49.296 71 34 2 272 342 29 97 3.68e-14 71.2
Msa1268630 AT1G69295.2 49.296 71 34 2 272 342 25 93 5.88e-14 70.9
Msa1268630 AT3G55430.1 40.541 74 42 2 275 348 378 449 6.35e-14 72.8
Msa1268630 AT1G66852.1 37.500 80 48 2 269 348 32 109 2.07e-13 66.2
Msa1268630 AT1G66250.1 45.455 77 39 2 273 348 378 452 2.92e-13 71.2
Msa1268630 AT4G34480.1 42.857 77 42 2 272 348 373 447 1.04e-12 69.3
Msa1268630 AT4G34480.3 42.857 77 42 2 272 348 262 336 1.11e-12 68.9
Msa1268630 AT2G29735.1 38.542 96 53 4 255 348 25 116 1.47e-12 64.3
Msa1268630 AT4G09465.1 38.961 77 45 2 272 348 40 114 1.49e-12 64.3
Msa1268630 AT4G09462.1 38.961 77 45 2 272 348 38 112 1.57e-12 63.9
Msa1268630 AT4G09464.1 38.961 77 45 2 272 348 40 114 1.81e-12 63.9
Msa1268630 AT4G09467.1 38.961 77 45 2 272 348 40 114 1.81e-12 63.9
Msa1268630 AT5G63250.1 45.000 80 41 3 272 349 51 129 1.99e-12 64.3
Msa1268630 AT4G16165.1 32.099 81 54 1 268 348 31 110 5.13e-12 62.4
Msa1268630 AT4G09466.1 37.662 77 46 2 272 348 40 114 6.02e-12 62.4
Msa1268630 AT4G09090.1 38.462 78 46 2 272 349 40 115 8.58e-12 62.0
Msa1268630 AT5G53600.1 37.805 82 48 2 267 348 33 111 3.42e-11 60.1
Msa1268630 AT2G43670.1 37.975 79 46 2 268 346 40 115 4.59e-11 60.1
Msa1268630 AT2G16230.1 39.474 76 44 2 273 348 376 449 8.20e-11 63.5

Find 72 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGACATAAATTCTCCAAAT+TGG 0.147457 8_3:-1683909 None:intergenic
GTAGTTTGCATTGCAGTTTC+TGG 0.188078 8_3:+1682213 Msa1268630:intron
TATATTATGTGGACCCAATT+TGG 0.203652 8_3:+1683895 Msa1268630:three_prime_UTR
TCTAAATGAAAAGCATAATA+TGG 0.242719 8_3:-1684042 None:intergenic
CTTATGCATTCAATAGTTAC+TGG 0.260747 8_3:+1683309 Msa1268630:CDS
GTTGAGCAATTTCTGGAATT+GGG 0.288063 8_3:-1682866 None:intergenic
GGTTGAGCAATTTCTGGAAT+TGG 0.309049 8_3:-1682867 None:intergenic
GAACAACATTAAGGTTGTTT+TGG 0.320840 8_3:-1682467 None:intergenic
TTCTTCTCACTGTCTTGTAT+TGG 0.334325 8_3:-1681959 None:intergenic
CATCTTCTCTTTCTTTGCTC+TGG 0.345679 8_3:+1682023 Msa1268630:CDS
TTTGAATTTGGTACATTGTA+AGG 0.345996 8_3:-1682927 None:intergenic
CACTTGTTTCACATAGGTTT+AGG 0.352249 8_3:-1682254 None:intergenic
TGAAGGTGGTGCTGATTGTT+TGG 0.361551 8_3:+1683229 Msa1268630:CDS
GCATGAGCAACCAATGTATC+AGG 0.366680 8_3:-1683284 None:intergenic
ACAAGAAAAGAAAATGAAAA+TGG 0.371125 8_3:+1681989 Msa1268630:exon
GGTTTGAAGTAGCTGAGTTA+AGG 0.381419 8_3:-1682590 None:intergenic
TGAAACGTTGCAAGAAGCTT+TGG 0.385008 8_3:+1683193 Msa1268630:CDS
GCTTGAAGAAACTCAATCAT+AGG 0.387058 8_3:-1682633 None:intergenic
AGATCACTTTGGTTGTTGAT+TGG 0.399416 8_3:+1683834 Msa1268630:three_prime_UTR
ACAGAAGTAGAACAACATTA+AGG 0.399975 8_3:-1682476 None:intergenic
AGACATAAATTCTCCAAATT+GGG 0.404814 8_3:-1683908 None:intergenic
CAATGTTTATGATATTGTTA+TGG 0.410294 8_3:-1682770 None:intergenic
GTTTGAAGTAGCTGAGTTAA+GGG 0.410988 8_3:-1682589 None:intergenic
TGGCAAAAGCATAAGAGAAT+TGG 0.415770 8_3:+1683329 Msa1268630:CDS
GCTTCTTGCAACGTTTCATC+AGG 0.416313 8_3:-1683188 None:intergenic
ATGTATAAACTTATATTATG+TGG 0.426320 8_3:+1683884 Msa1268630:three_prime_UTR
TCTATCATTCCCTCAAAAGA+TGG 0.439369 8_3:+1682514 Msa1268630:CDS
GATGAAACTATTTGAGCTAA+AGG 0.452012 8_3:-1682960 None:intergenic
TATCAGCTGAAACTTGGCTT+AGG 0.457511 8_3:+1682367 Msa1268630:CDS
TTTGCTACTAGCTAGCTAGT+TGG 0.459447 8_3:+1683858 Msa1268630:three_prime_UTR
TTGCAGGTTTCCTTCACTGT+AGG 0.460667 8_3:+1683720 Msa1268630:intron
GCAATTTCTGGAATTGGGGT+TGG 0.460853 8_3:-1682861 None:intergenic
TTTGGTACATTGTAAGGAGC+TGG 0.460933 8_3:-1682921 None:intergenic
ATTTGAGCTAAAGGTGGTAA+AGG 0.464246 8_3:-1682951 None:intergenic
TTGGATTATGCTTGTGGTGA+AGG 0.471347 8_3:+1683212 Msa1268630:CDS
ATTGGTGGAACTTGTGACTT+TGG 0.478733 8_3:+1683347 Msa1268630:CDS
TTGTTACAATCCTGATACAT+TGG 0.480675 8_3:+1683274 Msa1268630:CDS
CTATCATTCCCTCAAAAGAT+GGG 0.481726 8_3:+1682515 Msa1268630:CDS
GTGGAACTTGTGACTTTGGT+GGG 0.482171 8_3:+1683351 Msa1268630:CDS
TGTTGCTAGAGACCTTGTTA+AGG 0.501164 8_3:-1682341 None:intergenic
ACATTGTAAGGAGCTGGATA+AGG 0.502108 8_3:-1682915 None:intergenic
CAAAAGCATAAGAGAATTGG+TGG 0.510123 8_3:+1683332 Msa1268630:CDS
AAATGTGAAAACCTTGGACT+TGG 0.517443 8_3:-1682681 None:intergenic
TTGAGCAATTTCTGGAATTG+GGG 0.520319 8_3:-1682865 None:intergenic
TTGTTCAAAGAAACAGCTAA+AGG 0.528055 8_3:-1682312 None:intergenic
ATCCTATGTTAAGATCACTT+TGG 0.529038 8_3:+1683823 Msa1268630:three_prime_UTR
AACCAGCAGGGAAATCCAAA+GGG 0.537740 8_3:-1682890 None:intergenic
GAACCAGCAGGGAAATCCAA+AGG 0.539386 8_3:-1682891 None:intergenic
GCTGGATAAGGAGAACCAGC+AGG 0.554077 8_3:-1682903 None:intergenic
TTTCTCTCATACCAAGTCCA+AGG 0.561006 8_3:+1682670 Msa1268630:CDS
TGTCTTCACTTGTTTCACAT+AGG 0.568580 8_3:-1682260 None:intergenic
ACAGTCCAAATCAAAAGCAA+TGG 0.570988 8_3:-1682562 None:intergenic
GTCTTGTTGGCAGAAAGTTG+AGG 0.577252 8_3:-1682445 None:intergenic
GATTATGCTTGTGGTGAAGG+TGG 0.582581 8_3:+1683215 Msa1268630:CDS
GGTGGAACTTGTGACTTTGG+TGG 0.584114 8_3:+1683350 Msa1268630:CDS
CAAGACAGTGAGAAGAACCT+TGG 0.600657 8_3:+1681965 Msa1268630:five_prime_UTR
AACGTTTCATCAGGAACACT+AGG 0.602336 8_3:-1683179 None:intergenic
GAAGCTTTGGATTATGCTTG+TGG 0.604890 8_3:+1683206 Msa1268630:CDS
GGATTGTAACAATTCCCTTG+TGG 0.608596 8_3:-1683263 None:intergenic
AACCAAAGTGATCTTAACAT+AGG 0.609490 8_3:-1683825 None:intergenic
TTGGAGATTACTACTCCACA+AGG 0.615549 8_3:+1683248 Msa1268630:CDS
TGAGAATAAACCTACAGTGA+AGG 0.617438 8_3:-1683730 None:intergenic
AAAAGAAAATGAAAATGGTG+TGG 0.631353 8_3:+1681994 Msa1268630:exon
TATCATTCCCTCAAAAGATG+GGG 0.632855 8_3:+1682516 Msa1268630:CDS
GAAACTATTTGAGCTAAAGG+TGG 0.639226 8_3:-1682957 None:intergenic
AAACTAATAATAGAAACCAC+AGG 0.643581 8_3:-1683781 None:intergenic
TGCATGAAGAGTTGTTCCTG+TGG 0.663059 8_3:+1683765 Msa1268630:three_prime_UTR
GAACAATGAAGACCTTAACA+AGG 0.665682 8_3:+1682329 Msa1268630:CDS
CTGGATAAGGAGAACCAGCA+GGG 0.668605 8_3:-1682902 None:intergenic
ACCAGCAGGGAAATCCAAAG+GGG 0.725497 8_3:-1682889 None:intergenic
TGGAGATTACTACTCCACAA+GGG 0.734669 8_3:+1683249 Msa1268630:CDS
CCAGCAGGGAAATCCAAAGG+GGG 0.739134 8_3:-1682888 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGTATAAACTTATATTATG+TGG + chr8_3:1683884-1683903 Msa1268630:three_prime_UTR 15.0%
!!! ATGTCTTAATTTTTGTTATT+AGG + chr8_3:1683925-1683944 Msa1268630:three_prime_UTR 15.0%
!!! TAATTTTTGTTATTAGGATT+TGG + chr8_3:1683931-1683950 Msa1268630:three_prime_UTR 15.0%
!! ATGTATAAACTTATATTATG+TGG + chr8_3:1683884-1683903 Msa1268630:three_prime_UTR 15.0%
!!! ATGTCTTAATTTTTGTTATT+AGG + chr8_3:1683925-1683944 Msa1268630:three_prime_UTR 15.0%
!!! TAATTTTTGTTATTAGGATT+TGG + chr8_3:1683931-1683950 Msa1268630:three_prime_UTR 15.0%
!! ACAAGAAAAGAAAATGAAAA+TGG + chr8_3:1681989-1682008 Msa1268630:exon 20.0%
!!! GTTTTAACATTTTCAAATCA+TGG - chr8_3:1682614-1682633 None:intergenic 20.0%
!! CAATGTTTATGATATTGTTA+TGG - chr8_3:1682773-1682792 None:intergenic 20.0%
!! TAAATTAATAAGCACTTACT+TGG - chr8_3:1683401-1683420 None:intergenic 20.0%
!! AAGTAAGTGCTTATTAATTT+AGG + chr8_3:1683400-1683419 Msa1268630:intron 20.0%
!! TGTTAATTAATAATGAGTGA+TGG + chr8_3:1683451-1683470 Msa1268630:intron 20.0%
!!! AATTAATTAGCTGTTTTAGA+TGG - chr8_3:1683635-1683654 None:intergenic 20.0%
!! TTACATTAATAATGGTGAAT+TGG + chr8_3:1683686-1683705 Msa1268630:intron 20.0%
!!! TCTAAATGAAAAGCATAATA+TGG - chr8_3:1684045-1684064 None:intergenic 20.0%
!! ACAAGAAAAGAAAATGAAAA+TGG + chr8_3:1681989-1682008 Msa1268630:exon 20.0%
!!! GTTTTAACATTTTCAAATCA+TGG - chr8_3:1682614-1682633 None:intergenic 20.0%
!! CAATGTTTATGATATTGTTA+TGG - chr8_3:1682773-1682792 None:intergenic 20.0%
!! TAAATTAATAAGCACTTACT+TGG - chr8_3:1683401-1683420 None:intergenic 20.0%
!! AAGTAAGTGCTTATTAATTT+AGG + chr8_3:1683400-1683419 Msa1268630:intron 20.0%
!! TGTTAATTAATAATGAGTGA+TGG + chr8_3:1683451-1683470 Msa1268630:intron 20.0%
!!! AATTAATTAGCTGTTTTAGA+TGG - chr8_3:1683635-1683654 None:intergenic 20.0%
!! TTACATTAATAATGGTGAAT+TGG + chr8_3:1683686-1683705 Msa1268630:intron 20.0%
!!! TCTAAATGAAAAGCATAATA+TGG - chr8_3:1684045-1684064 None:intergenic 20.0%
! AAAAGAAAATGAAAATGGTG+TGG + chr8_3:1681994-1682013 Msa1268630:exon 25.0%
!! TTTTTGATGAAGGGTAATAT+GGG - chr8_3:1682404-1682423 None:intergenic 25.0%
!! ATTTTTGATGAAGGGTAATA+TGG - chr8_3:1682405-1682424 None:intergenic 25.0%
! TTAGAATCCATGAAAAAACT+TGG + chr8_3:1682738-1682757 Msa1268630:CDS 25.0%
!!! GAAAAATCCAAGTTTTTTCA+TGG - chr8_3:1682748-1682767 None:intergenic 25.0%
!! TAGTGATTTTTCTCTCTTTT+GGG - chr8_3:1682806-1682825 None:intergenic 25.0%
! TTTGAATTTGGTACATTGTA+AGG - chr8_3:1682930-1682949 None:intergenic 25.0%
! TATAGTTATTGTACATAGCA+GGG - chr8_3:1683565-1683584 None:intergenic 25.0%
! TTATAGTTATTGTACATAGC+AGG - chr8_3:1683566-1683585 None:intergenic 25.0%
! ATAAAGTATGTAACTACCAA+AGG + chr8_3:1683582-1683601 Msa1268630:intron 25.0%
! AAACTAATAATAGAAACCAC+AGG - chr8_3:1683784-1683803 None:intergenic 25.0%
! AGACATAAATTCTCCAAATT+GGG - chr8_3:1683911-1683930 None:intergenic 25.0%
! AAGACATAAATTCTCCAAAT+TGG - chr8_3:1683912-1683931 None:intergenic 25.0%
!! TCACTAATCAGAATTTTGAA+GGG - chr8_3:1683990-1684009 None:intergenic 25.0%
!! ATCACTAATCAGAATTTTGA+AGG - chr8_3:1683991-1684010 None:intergenic 25.0%
! AAAAGAAAATGAAAATGGTG+TGG + chr8_3:1681994-1682013 Msa1268630:exon 25.0%
!! TTTTTGATGAAGGGTAATAT+GGG - chr8_3:1682404-1682423 None:intergenic 25.0%
!! ATTTTTGATGAAGGGTAATA+TGG - chr8_3:1682405-1682424 None:intergenic 25.0%
! TTAGAATCCATGAAAAAACT+TGG + chr8_3:1682738-1682757 Msa1268630:CDS 25.0%
!!! GAAAAATCCAAGTTTTTTCA+TGG - chr8_3:1682748-1682767 None:intergenic 25.0%
!! TAGTGATTTTTCTCTCTTTT+GGG - chr8_3:1682806-1682825 None:intergenic 25.0%
! TTTGAATTTGGTACATTGTA+AGG - chr8_3:1682930-1682949 None:intergenic 25.0%
! TATAGTTATTGTACATAGCA+GGG - chr8_3:1683565-1683584 None:intergenic 25.0%
! TTATAGTTATTGTACATAGC+AGG - chr8_3:1683566-1683585 None:intergenic 25.0%
! ATAAAGTATGTAACTACCAA+AGG + chr8_3:1683582-1683601 Msa1268630:intron 25.0%
! AAACTAATAATAGAAACCAC+AGG - chr8_3:1683784-1683803 None:intergenic 25.0%
! AGACATAAATTCTCCAAATT+GGG - chr8_3:1683911-1683930 None:intergenic 25.0%
! AAGACATAAATTCTCCAAAT+TGG - chr8_3:1683912-1683931 None:intergenic 25.0%
!! TCACTAATCAGAATTTTGAA+GGG - chr8_3:1683990-1684009 None:intergenic 25.0%
!! ATCACTAATCAGAATTTTGA+AGG - chr8_3:1683991-1684010 None:intergenic 25.0%
TTGTTCAAAGAAACAGCTAA+AGG - chr8_3:1682315-1682334 None:intergenic 30.0%
! ACATTTTATCAGCTGAAACT+TGG + chr8_3:1682361-1682380 Msa1268630:CDS 30.0%
!!! TGTTGGTGATTTTTGATGAA+GGG - chr8_3:1682413-1682432 None:intergenic 30.0%
!!! ATGTTGGTGATTTTTGATGA+AGG - chr8_3:1682414-1682433 None:intergenic 30.0%
TCAAAAATCACCAACATTGT+TGG + chr8_3:1682417-1682436 Msa1268630:CDS 30.0%
! GAACAACATTAAGGTTGTTT+TGG - chr8_3:1682470-1682489 None:intergenic 30.0%
ACAGAAGTAGAACAACATTA+AGG - chr8_3:1682479-1682498 None:intergenic 30.0%
!! AGTTTCCATTGCTTTTGATT+TGG + chr8_3:1682557-1682576 Msa1268630:CDS 30.0%
TCAGAAAAATGTGAAAACCT+TGG - chr8_3:1682690-1682709 None:intergenic 30.0%
!!! TTTTCTCTCTTTTGGGATAA+TGG - chr8_3:1682799-1682818 None:intergenic 30.0%
! GTAGTGATTTTTCTCTCTTT+TGG - chr8_3:1682807-1682826 None:intergenic 30.0%
GATGAAACTATTTGAGCTAA+AGG - chr8_3:1682963-1682982 None:intergenic 30.0%
TTGTTACAATCCTGATACAT+TGG + chr8_3:1683274-1683293 Msa1268630:CDS 30.0%
CTTATGCATTCAATAGTTAC+TGG + chr8_3:1683309-1683328 Msa1268630:CDS 30.0%
! AGTTAGTTACACAGTTTGTT+AGG - chr8_3:1683608-1683627 None:intergenic 30.0%
!! ATTGGTTATTGTTTTGTTGC+AGG + chr8_3:1683704-1683723 Msa1268630:intron 30.0%
ATCCTATGTTAAGATCACTT+TGG + chr8_3:1683823-1683842 Msa1268630:three_prime_UTR 30.0%
AACCAAAGTGATCTTAACAT+AGG - chr8_3:1683828-1683847 None:intergenic 30.0%
TATATTATGTGGACCCAATT+TGG + chr8_3:1683895-1683914 Msa1268630:three_prime_UTR 30.0%
TTGTTCAAAGAAACAGCTAA+AGG - chr8_3:1682315-1682334 None:intergenic 30.0%
! ACATTTTATCAGCTGAAACT+TGG + chr8_3:1682361-1682380 Msa1268630:CDS 30.0%
!!! TGTTGGTGATTTTTGATGAA+GGG - chr8_3:1682413-1682432 None:intergenic 30.0%
!!! ATGTTGGTGATTTTTGATGA+AGG - chr8_3:1682414-1682433 None:intergenic 30.0%
TCAAAAATCACCAACATTGT+TGG + chr8_3:1682417-1682436 Msa1268630:CDS 30.0%
! GAACAACATTAAGGTTGTTT+TGG - chr8_3:1682470-1682489 None:intergenic 30.0%
ACAGAAGTAGAACAACATTA+AGG - chr8_3:1682479-1682498 None:intergenic 30.0%
!! AGTTTCCATTGCTTTTGATT+TGG + chr8_3:1682557-1682576 Msa1268630:CDS 30.0%
TCAGAAAAATGTGAAAACCT+TGG - chr8_3:1682690-1682709 None:intergenic 30.0%
!!! TTTTCTCTCTTTTGGGATAA+TGG - chr8_3:1682799-1682818 None:intergenic 30.0%
! GTAGTGATTTTTCTCTCTTT+TGG - chr8_3:1682807-1682826 None:intergenic 30.0%
GATGAAACTATTTGAGCTAA+AGG - chr8_3:1682963-1682982 None:intergenic 30.0%
TTGTTACAATCCTGATACAT+TGG + chr8_3:1683274-1683293 Msa1268630:CDS 30.0%
CTTATGCATTCAATAGTTAC+TGG + chr8_3:1683309-1683328 Msa1268630:CDS 30.0%
! AGTTAGTTACACAGTTTGTT+AGG - chr8_3:1683608-1683627 None:intergenic 30.0%
!! ATTGGTTATTGTTTTGTTGC+AGG + chr8_3:1683704-1683723 Msa1268630:intron 30.0%
ATCCTATGTTAAGATCACTT+TGG + chr8_3:1683823-1683842 Msa1268630:three_prime_UTR 30.0%
AACCAAAGTGATCTTAACAT+AGG - chr8_3:1683828-1683847 None:intergenic 30.0%
TATATTATGTGGACCCAATT+TGG + chr8_3:1683895-1683914 Msa1268630:three_prime_UTR 30.0%
TTCTTCTCACTGTCTTGTAT+TGG - chr8_3:1681962-1681981 None:intergenic 35.0%
! CATTTTCTTTTCTTGTGCCA+AGG - chr8_3:1681985-1682004 None:intergenic 35.0%
CACTTGTTTCACATAGGTTT+AGG - chr8_3:1682257-1682276 None:intergenic 35.0%
TGTCTTCACTTGTTTCACAT+AGG - chr8_3:1682263-1682282 None:intergenic 35.0%
GAACAATGAAGACCTTAACA+AGG + chr8_3:1682329-1682348 Msa1268630:CDS 35.0%
! TGAGGTTTTTCCAACAATGT+TGG - chr8_3:1682430-1682449 None:intergenic 35.0%
!!! TAAGGTTGTTTTGGTCTTGT+TGG - chr8_3:1682461-1682480 None:intergenic 35.0%
TCTATCATTCCCTCAAAAGA+TGG + chr8_3:1682514-1682533 Msa1268630:CDS 35.0%
CTATCATTCCCTCAAAAGAT+GGG + chr8_3:1682515-1682534 Msa1268630:CDS 35.0%
TATCATTCCCTCAAAAGATG+GGG + chr8_3:1682516-1682535 Msa1268630:CDS 35.0%
! TTCTAAACCCCATCTTTTGA+GGG - chr8_3:1682526-1682545 None:intergenic 35.0%
ACAGTCCAAATCAAAAGCAA+TGG - chr8_3:1682565-1682584 None:intergenic 35.0%
! GTTTGAAGTAGCTGAGTTAA+GGG - chr8_3:1682592-1682611 None:intergenic 35.0%
GCTTGAAGAAACTCAATCAT+AGG - chr8_3:1682636-1682655 None:intergenic 35.0%
AAATGTGAAAACCTTGGACT+TGG - chr8_3:1682684-1682703 None:intergenic 35.0%
!!! GGTTGGTTTTATAGGAATTG+TGG - chr8_3:1682847-1682866 None:intergenic 35.0%
!! TTGAGCAATTTCTGGAATTG+GGG - chr8_3:1682868-1682887 None:intergenic 35.0%
!! GTTGAGCAATTTCTGGAATT+GGG - chr8_3:1682869-1682888 None:intergenic 35.0%
!!! GGTGGTAAAGGTTTTGAATT+TGG - chr8_3:1682942-1682961 None:intergenic 35.0%
ATTTGAGCTAAAGGTGGTAA+AGG - chr8_3:1682954-1682973 None:intergenic 35.0%
GAAACTATTTGAGCTAAAGG+TGG - chr8_3:1682960-1682979 None:intergenic 35.0%
AAATAGGGAGAAGAAATTGG+TGG - chr8_3:1682990-1683009 None:intergenic 35.0%
GCAAAATAGGGAGAAGAAAT+TGG - chr8_3:1682993-1683012 None:intergenic 35.0%
! TTTTCTATTGCATTGCAAGG+TGG - chr8_3:1683092-1683111 None:intergenic 35.0%
! CCATTTTCTATTGCATTGCA+AGG - chr8_3:1683095-1683114 None:intergenic 35.0%
CCTTGCAATGCAATAGAAAA+TGG + chr8_3:1683092-1683111 Msa1268630:intron 35.0%
GCAATTTGTGGATAATGTGA+AGG - chr8_3:1683128-1683147 None:intergenic 35.0%
! TGGCAAAAGCATAAGAGAAT+TGG + chr8_3:1683329-1683348 Msa1268630:CDS 35.0%
! CAAAAGCATAAGAGAATTGG+TGG + chr8_3:1683332-1683351 Msa1268630:CDS 35.0%
TGAGAATAAACCTACAGTGA+AGG - chr8_3:1683733-1683752 None:intergenic 35.0%
AGATCACTTTGGTTGTTGAT+TGG + chr8_3:1683834-1683853 Msa1268630:three_prime_UTR 35.0%
TTCTTCTCACTGTCTTGTAT+TGG - chr8_3:1681962-1681981 None:intergenic 35.0%
! CATTTTCTTTTCTTGTGCCA+AGG - chr8_3:1681985-1682004 None:intergenic 35.0%
CACTTGTTTCACATAGGTTT+AGG - chr8_3:1682257-1682276 None:intergenic 35.0%
TGTCTTCACTTGTTTCACAT+AGG - chr8_3:1682263-1682282 None:intergenic 35.0%
GAACAATGAAGACCTTAACA+AGG + chr8_3:1682329-1682348 Msa1268630:CDS 35.0%
! TGAGGTTTTTCCAACAATGT+TGG - chr8_3:1682430-1682449 None:intergenic 35.0%
!!! TAAGGTTGTTTTGGTCTTGT+TGG - chr8_3:1682461-1682480 None:intergenic 35.0%
TCTATCATTCCCTCAAAAGA+TGG + chr8_3:1682514-1682533 Msa1268630:CDS 35.0%
CTATCATTCCCTCAAAAGAT+GGG + chr8_3:1682515-1682534 Msa1268630:CDS 35.0%
TATCATTCCCTCAAAAGATG+GGG + chr8_3:1682516-1682535 Msa1268630:CDS 35.0%
! TTCTAAACCCCATCTTTTGA+GGG - chr8_3:1682526-1682545 None:intergenic 35.0%
ACAGTCCAAATCAAAAGCAA+TGG - chr8_3:1682565-1682584 None:intergenic 35.0%
! GTTTGAAGTAGCTGAGTTAA+GGG - chr8_3:1682592-1682611 None:intergenic 35.0%
GCTTGAAGAAACTCAATCAT+AGG - chr8_3:1682636-1682655 None:intergenic 35.0%
AAATGTGAAAACCTTGGACT+TGG - chr8_3:1682684-1682703 None:intergenic 35.0%
!!! GGTTGGTTTTATAGGAATTG+TGG - chr8_3:1682847-1682866 None:intergenic 35.0%
!! TTGAGCAATTTCTGGAATTG+GGG - chr8_3:1682868-1682887 None:intergenic 35.0%
!! GTTGAGCAATTTCTGGAATT+GGG - chr8_3:1682869-1682888 None:intergenic 35.0%
!!! GGTGGTAAAGGTTTTGAATT+TGG - chr8_3:1682942-1682961 None:intergenic 35.0%
ATTTGAGCTAAAGGTGGTAA+AGG - chr8_3:1682954-1682973 None:intergenic 35.0%
GAAACTATTTGAGCTAAAGG+TGG - chr8_3:1682960-1682979 None:intergenic 35.0%
AAATAGGGAGAAGAAATTGG+TGG - chr8_3:1682990-1683009 None:intergenic 35.0%
GCAAAATAGGGAGAAGAAAT+TGG - chr8_3:1682993-1683012 None:intergenic 35.0%
! TTTTCTATTGCATTGCAAGG+TGG - chr8_3:1683092-1683111 None:intergenic 35.0%
! CCATTTTCTATTGCATTGCA+AGG - chr8_3:1683095-1683114 None:intergenic 35.0%
CCTTGCAATGCAATAGAAAA+TGG + chr8_3:1683092-1683111 Msa1268630:intron 35.0%
GCAATTTGTGGATAATGTGA+AGG - chr8_3:1683128-1683147 None:intergenic 35.0%
! TGGCAAAAGCATAAGAGAAT+TGG + chr8_3:1683329-1683348 Msa1268630:CDS 35.0%
! CAAAAGCATAAGAGAATTGG+TGG + chr8_3:1683332-1683351 Msa1268630:CDS 35.0%
TGAGAATAAACCTACAGTGA+AGG - chr8_3:1683733-1683752 None:intergenic 35.0%
AGATCACTTTGGTTGTTGAT+TGG + chr8_3:1683834-1683853 Msa1268630:three_prime_UTR 35.0%
CATCTTCTCTTTCTTTGCTC+TGG + chr8_3:1682023-1682042 Msa1268630:CDS 40.0%
! GTAGTTTGCATTGCAGTTTC+TGG + chr8_3:1682213-1682232 Msa1268630:intron 40.0%
TGTTGCTAGAGACCTTGTTA+AGG - chr8_3:1682344-1682363 None:intergenic 40.0%
TATCAGCTGAAACTTGGCTT+AGG + chr8_3:1682367-1682386 Msa1268630:CDS 40.0%
!! GTTCTAAACCCCATCTTTTG+AGG - chr8_3:1682527-1682546 None:intergenic 40.0%
! GGTTTGAAGTAGCTGAGTTA+AGG - chr8_3:1682593-1682612 None:intergenic 40.0%
TTTCTCTCATACCAAGTCCA+AGG + chr8_3:1682670-1682689 Msa1268630:CDS 40.0%
!!! GGAATTGGGGTTGGTTTTAT+AGG - chr8_3:1682855-1682874 None:intergenic 40.0%
!! GGTTGAGCAATTTCTGGAAT+TGG - chr8_3:1682870-1682889 None:intergenic 40.0%
ACATTGTAAGGAGCTGGATA+AGG - chr8_3:1682918-1682937 None:intergenic 40.0%
TTTGGTACATTGTAAGGAGC+TGG - chr8_3:1682924-1682943 None:intergenic 40.0%
TGTTCTTGAGGGGCAAAATA+GGG - chr8_3:1683005-1683024 None:intergenic 40.0%
TTGTTCTTGAGGGGCAAAAT+AGG - chr8_3:1683006-1683025 None:intergenic 40.0%
!! ATGGTGATGGTTGTTCTTGA+GGG - chr8_3:1683016-1683035 None:intergenic 40.0%
!! AATGGTGATGGTTGTTCTTG+AGG - chr8_3:1683017-1683036 None:intergenic 40.0%
GATACAAACTGTGGTGGTAA+TGG - chr8_3:1683035-1683054 None:intergenic 40.0%
TTAGCAGGAGATACAAACTG+TGG - chr8_3:1683044-1683063 None:intergenic 40.0%
! GGACAAGTGAAACCATTTTG+AGG - chr8_3:1683071-1683090 None:intergenic 40.0%
TGTGGATAATGTGAAGGTGA+AGG - chr8_3:1683122-1683141 None:intergenic 40.0%
TTCTGAACAGGTGCAATTTG+TGG - chr8_3:1683140-1683159 None:intergenic 40.0%
TTGCACCTGTTCAGAAACTT+TGG + chr8_3:1683144-1683163 Msa1268630:intron 40.0%
ACACACCAAAGTTTCTGAAC+AGG - chr8_3:1683152-1683171 None:intergenic 40.0%
AACGTTTCATCAGGAACACT+AGG - chr8_3:1683182-1683201 None:intergenic 40.0%
TGAAACGTTGCAAGAAGCTT+TGG + chr8_3:1683193-1683212 Msa1268630:CDS 40.0%
!! GAAGCTTTGGATTATGCTTG+TGG + chr8_3:1683206-1683225 Msa1268630:CDS 40.0%
TTGGATTATGCTTGTGGTGA+AGG + chr8_3:1683212-1683231 Msa1268630:CDS 40.0%
TTGGAGATTACTACTCCACA+AGG + chr8_3:1683248-1683267 Msa1268630:CDS 40.0%
TGGAGATTACTACTCCACAA+GGG + chr8_3:1683249-1683268 Msa1268630:CDS 40.0%
GGATTGTAACAATTCCCTTG+TGG - chr8_3:1683266-1683285 None:intergenic 40.0%
ATTGGTGGAACTTGTGACTT+TGG + chr8_3:1683347-1683366 Msa1268630:CDS 40.0%
AGTGATGGTTGTGTTGTGAA+TGG + chr8_3:1683466-1683485 Msa1268630:intron 40.0%
!! TACACAGTTTGTTAGGCCTT+TGG - chr8_3:1683601-1683620 None:intergenic 40.0%
TTTGCTACTAGCTAGCTAGT+TGG + chr8_3:1683858-1683877 Msa1268630:three_prime_UTR 40.0%
CATCTTCTCTTTCTTTGCTC+TGG + chr8_3:1682023-1682042 Msa1268630:CDS 40.0%
! GTAGTTTGCATTGCAGTTTC+TGG + chr8_3:1682213-1682232 Msa1268630:intron 40.0%
TGTTGCTAGAGACCTTGTTA+AGG - chr8_3:1682344-1682363 None:intergenic 40.0%
TATCAGCTGAAACTTGGCTT+AGG + chr8_3:1682367-1682386 Msa1268630:CDS 40.0%
!! GTTCTAAACCCCATCTTTTG+AGG - chr8_3:1682527-1682546 None:intergenic 40.0%
! GGTTTGAAGTAGCTGAGTTA+AGG - chr8_3:1682593-1682612 None:intergenic 40.0%
TTTCTCTCATACCAAGTCCA+AGG + chr8_3:1682670-1682689 Msa1268630:CDS 40.0%
!!! GGAATTGGGGTTGGTTTTAT+AGG - chr8_3:1682855-1682874 None:intergenic 40.0%
!! GGTTGAGCAATTTCTGGAAT+TGG - chr8_3:1682870-1682889 None:intergenic 40.0%
ACATTGTAAGGAGCTGGATA+AGG - chr8_3:1682918-1682937 None:intergenic 40.0%
TTTGGTACATTGTAAGGAGC+TGG - chr8_3:1682924-1682943 None:intergenic 40.0%
TGTTCTTGAGGGGCAAAATA+GGG - chr8_3:1683005-1683024 None:intergenic 40.0%
TTGTTCTTGAGGGGCAAAAT+AGG - chr8_3:1683006-1683025 None:intergenic 40.0%
!! ATGGTGATGGTTGTTCTTGA+GGG - chr8_3:1683016-1683035 None:intergenic 40.0%
!! AATGGTGATGGTTGTTCTTG+AGG - chr8_3:1683017-1683036 None:intergenic 40.0%
GATACAAACTGTGGTGGTAA+TGG - chr8_3:1683035-1683054 None:intergenic 40.0%
TTAGCAGGAGATACAAACTG+TGG - chr8_3:1683044-1683063 None:intergenic 40.0%
! GGACAAGTGAAACCATTTTG+AGG - chr8_3:1683071-1683090 None:intergenic 40.0%
TGTGGATAATGTGAAGGTGA+AGG - chr8_3:1683122-1683141 None:intergenic 40.0%
TTCTGAACAGGTGCAATTTG+TGG - chr8_3:1683140-1683159 None:intergenic 40.0%
TTGCACCTGTTCAGAAACTT+TGG + chr8_3:1683144-1683163 Msa1268630:intron 40.0%
ACACACCAAAGTTTCTGAAC+AGG - chr8_3:1683152-1683171 None:intergenic 40.0%
AACGTTTCATCAGGAACACT+AGG - chr8_3:1683182-1683201 None:intergenic 40.0%
TGAAACGTTGCAAGAAGCTT+TGG + chr8_3:1683193-1683212 Msa1268630:CDS 40.0%
!! GAAGCTTTGGATTATGCTTG+TGG + chr8_3:1683206-1683225 Msa1268630:CDS 40.0%
TTGGATTATGCTTGTGGTGA+AGG + chr8_3:1683212-1683231 Msa1268630:CDS 40.0%
TTGGAGATTACTACTCCACA+AGG + chr8_3:1683248-1683267 Msa1268630:CDS 40.0%
TGGAGATTACTACTCCACAA+GGG + chr8_3:1683249-1683268 Msa1268630:CDS 40.0%
GGATTGTAACAATTCCCTTG+TGG - chr8_3:1683266-1683285 None:intergenic 40.0%
ATTGGTGGAACTTGTGACTT+TGG + chr8_3:1683347-1683366 Msa1268630:CDS 40.0%
AGTGATGGTTGTGTTGTGAA+TGG + chr8_3:1683466-1683485 Msa1268630:intron 40.0%
!! TACACAGTTTGTTAGGCCTT+TGG - chr8_3:1683601-1683620 None:intergenic 40.0%
TTTGCTACTAGCTAGCTAGT+TGG + chr8_3:1683858-1683877 Msa1268630:three_prime_UTR 40.0%
CAAGACAGTGAGAAGAACCT+TGG + chr8_3:1681965-1681984 Msa1268630:five_prime_UTR 45.0%
! GTCTTGTTGGCAGAAAGTTG+AGG - chr8_3:1682448-1682467 None:intergenic 45.0%
!! GCAATTTCTGGAATTGGGGT+TGG - chr8_3:1682864-1682883 None:intergenic 45.0%
AAAGGGGGTTGAGCAATTTC+TGG - chr8_3:1682876-1682895 None:intergenic 45.0%
AGAAATTGCTCAACCCCCTT+TGG + chr8_3:1682875-1682894 Msa1268630:CDS 45.0%
AACCAGCAGGGAAATCCAAA+GGG - chr8_3:1682893-1682912 None:intergenic 45.0%
TAGGGAGAAGAAATTGGTGG+TGG - chr8_3:1682987-1683006 None:intergenic 45.0%
!! TGGTGATGGTTGTTCTTGAG+GGG - chr8_3:1683015-1683034 None:intergenic 45.0%
!! AACTGTGGTGGTAATGGTGA+TGG - chr8_3:1683029-1683048 None:intergenic 45.0%
!! CCATTTTGAGGAGAGTTAGC+AGG - chr8_3:1683059-1683078 None:intergenic 45.0%
CCTGCTAACTCTCCTCAAAA+TGG + chr8_3:1683056-1683075 Msa1268630:intron 45.0%
GCTTCTTGCAACGTTTCATC+AGG - chr8_3:1683191-1683210 None:intergenic 45.0%
GATTATGCTTGTGGTGAAGG+TGG + chr8_3:1683215-1683234 Msa1268630:CDS 45.0%
!! TGAAGGTGGTGCTGATTGTT+TGG + chr8_3:1683229-1683248 Msa1268630:CDS 45.0%
GCATGAGCAACCAATGTATC+AGG - chr8_3:1683287-1683306 None:intergenic 45.0%
GTGGAACTTGTGACTTTGGT+GGG + chr8_3:1683351-1683370 Msa1268630:CDS 45.0%
TTGCAGGTTTCCTTCACTGT+AGG + chr8_3:1683720-1683739 Msa1268630:intron 45.0%
TGCATGAAGAGTTGTTCCTG+TGG + chr8_3:1683765-1683784 Msa1268630:three_prime_UTR 45.0%
CAAGACAGTGAGAAGAACCT+TGG + chr8_3:1681965-1681984 Msa1268630:five_prime_UTR 45.0%
! GTCTTGTTGGCAGAAAGTTG+AGG - chr8_3:1682448-1682467 None:intergenic 45.0%
!! GCAATTTCTGGAATTGGGGT+TGG - chr8_3:1682864-1682883 None:intergenic 45.0%
AAAGGGGGTTGAGCAATTTC+TGG - chr8_3:1682876-1682895 None:intergenic 45.0%
AGAAATTGCTCAACCCCCTT+TGG + chr8_3:1682875-1682894 Msa1268630:CDS 45.0%
AACCAGCAGGGAAATCCAAA+GGG - chr8_3:1682893-1682912 None:intergenic 45.0%
TAGGGAGAAGAAATTGGTGG+TGG - chr8_3:1682987-1683006 None:intergenic 45.0%
!! TGGTGATGGTTGTTCTTGAG+GGG - chr8_3:1683015-1683034 None:intergenic 45.0%
!! AACTGTGGTGGTAATGGTGA+TGG - chr8_3:1683029-1683048 None:intergenic 45.0%
!! CCATTTTGAGGAGAGTTAGC+AGG - chr8_3:1683059-1683078 None:intergenic 45.0%
CCTGCTAACTCTCCTCAAAA+TGG + chr8_3:1683056-1683075 Msa1268630:intron 45.0%
GCTTCTTGCAACGTTTCATC+AGG - chr8_3:1683191-1683210 None:intergenic 45.0%
GATTATGCTTGTGGTGAAGG+TGG + chr8_3:1683215-1683234 Msa1268630:CDS 45.0%
!! TGAAGGTGGTGCTGATTGTT+TGG + chr8_3:1683229-1683248 Msa1268630:CDS 45.0%
GCATGAGCAACCAATGTATC+AGG - chr8_3:1683287-1683306 None:intergenic 45.0%
GTGGAACTTGTGACTTTGGT+GGG + chr8_3:1683351-1683370 Msa1268630:CDS 45.0%
TTGCAGGTTTCCTTCACTGT+AGG + chr8_3:1683720-1683739 Msa1268630:intron 45.0%
TGCATGAAGAGTTGTTCCTG+TGG + chr8_3:1683765-1683784 Msa1268630:three_prime_UTR 45.0%
!! TTATTTATTTACATTAATAA+TGG + chr8_3:1683678-1683697 Msa1268630:intron 5.0%
!! TTATTTATTTACATTAATAA+TGG + chr8_3:1683678-1683697 Msa1268630:intron 5.0%
ACCAGCAGGGAAATCCAAAG+GGG - chr8_3:1682892-1682911 None:intergenic 50.0%
GAACCAGCAGGGAAATCCAA+AGG - chr8_3:1682894-1682913 None:intergenic 50.0%
CTGGATAAGGAGAACCAGCA+GGG - chr8_3:1682905-1682924 None:intergenic 50.0%
GCAGGAGATACAAACTGTGG+TGG - chr8_3:1683041-1683060 None:intergenic 50.0%
GGTGGAACTTGTGACTTTGG+TGG + chr8_3:1683350-1683369 Msa1268630:CDS 50.0%
ACCAGCAGGGAAATCCAAAG+GGG - chr8_3:1682892-1682911 None:intergenic 50.0%
GAACCAGCAGGGAAATCCAA+AGG - chr8_3:1682894-1682913 None:intergenic 50.0%
CTGGATAAGGAGAACCAGCA+GGG - chr8_3:1682905-1682924 None:intergenic 50.0%
GCAGGAGATACAAACTGTGG+TGG - chr8_3:1683041-1683060 None:intergenic 50.0%
GGTGGAACTTGTGACTTTGG+TGG + chr8_3:1683350-1683369 Msa1268630:CDS 50.0%
CCAGCAGGGAAATCCAAAGG+GGG - chr8_3:1682891-1682910 None:intergenic 55.0%
GCTGGATAAGGAGAACCAGC+AGG - chr8_3:1682906-1682925 None:intergenic 55.0%
CCAGCAGGGAAATCCAAAGG+GGG - chr8_3:1682891-1682910 None:intergenic 55.0%
GCTGGATAAGGAGAACCAGC+AGG - chr8_3:1682906-1682925 None:intergenic 55.0%
CCCCCTTTGGATTTCCCTGC+TGG + chr8_3:1682888-1682907 Msa1268630:CDS 60.0%
CCCCCTTTGGATTTCCCTGC+TGG + chr8_3:1682888-1682907 Msa1268630:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 1681946 1684070 1681946 ID=Msa1268630;Name=Msa1268630
chr8_3 mRNA 1681946 1684070 1681946 ID=Msa1268630-mRNA-1;Parent=Msa1268630;Name=Msa1268630-mRNA-1;_AED=0.07;_eAED=0.07;_QI=56|0.66|0.5|1|1|1|4|313|351
chr8_3 exon 1681946 1682044 1681946 ID=Msa1268630-mRNA-1:exon:449;Parent=Msa1268630-mRNA-1
chr8_3 exon 1682217 1682974 1682217 ID=Msa1268630-mRNA-1:exon:450;Parent=Msa1268630-mRNA-1
chr8_3 exon 1683179 1683401 1683179 ID=Msa1268630-mRNA-1:exon:451;Parent=Msa1268630-mRNA-1
chr8_3 exon 1683726 1684070 1683726 ID=Msa1268630-mRNA-1:exon:452;Parent=Msa1268630-mRNA-1
chr8_3 five_prime_UTR 1681946 1682001 1681946 ID=Msa1268630-mRNA-1:five_prime_utr;Parent=Msa1268630-mRNA-1
chr8_3 CDS 1682002 1682044 1682002 ID=Msa1268630-mRNA-1:cds;Parent=Msa1268630-mRNA-1
chr8_3 CDS 1682217 1682974 1682217 ID=Msa1268630-mRNA-1:cds;Parent=Msa1268630-mRNA-1
chr8_3 CDS 1683179 1683401 1683179 ID=Msa1268630-mRNA-1:cds;Parent=Msa1268630-mRNA-1
chr8_3 CDS 1683726 1683757 1683726 ID=Msa1268630-mRNA-1:cds;Parent=Msa1268630-mRNA-1
chr8_3 three_prime_UTR 1683758 1684070 1683758 ID=Msa1268630-mRNA-1:three_prime_utr;Parent=Msa1268630-mRNA-1
Gene Sequence

>Msa1268630

ATGAAAATGGTGTGGCTATTTCATCTTCTCTTTCTTTGCTCTGTTTGCATTGCAGTTTCTGGTCAACAAAACATTGAGTTCCTAAACCTATGTGAAACAAGTGAAGACATTGCAACATCTTCATCTCACAGTGAGTTTCCTTTAGCTGTTTCTTTGAACAATGAAGACCTTAACAAGGTCTCTAGCAACATTTTATCAGCTGAAACTTGGCTTAGGTTAAACATTTTCCCATATTACCCTTCATCAAAAATCACCAACATTGTTGGAAAAACCTCAACTTTCTGCCAACAAGACCAAAACAACCTTAATGTTGTTCTACTTCTGTCTTCTTTGAAAAATCTCTATCATTCCCTCAAAAGATGGGGTTTAGAACAAGATATCAAAGTTTCCATTGCTTTTGATTTGGACTGTTTTACCCTTAACTCAGCTACTTCAAACCATGATTTGAAAATGTTAAAACCTATGATTGAGTTTCTTCAAGCTGTTAACTCAACATTTTCTCTCATACCAAGTCCAAGGTTTTCACATTTTTCTGATAAAAGTTTAAACTTTGTGTCTTCTCAATTAGAATCCATGAAAAAACTTGGATTTTTCAACCATAACAATATCATAAACATTGCTACCATTATCCCAAAAGAGAGAAAAATCACTACTAGAAAACTTTCAGTTACCACAATTCCTATAAAACCAACCCCAATTCCAGAAATTGCTCAACCCCCTTTGGATTTCCCTGCTGGTTCTCCTTATCCAGCTCCTTACAATGTACCAAATTCAAAACCTTTACCACCTTTAGCTCAAATACCTAGTGTTCCTGATGAAACGTTGCAAGAAGCTTTGGATTATGCTTGTGGTGAAGGTGGTGCTGATTGTTTGGAGATTACTACTCCACAAGGGAATTGTTACAATCCTGATACATTGGTTGCTCATGCTTCTTATGCATTCAATAGTTACTGGCAAAAGCATAAGAGAATTGGTGGAACTTGTGACTTTGGTGGGACTGCTATGTTGATTCATTCTGATCCAAGTTTCCTTCACTGTAGGTTTATTCTCAGCTAG

Protein sequence

>Msa1268630

MKMVWLFHLLFLCSVCIAVSGQQNIEFLNLCETSEDIATSSSHSEFPLAVSLNNEDLNKVSSNILSAETWLRLNIFPYYPSSKITNIVGKTSTFCQQDQNNLNVVLLLSSLKNLYHSLKRWGLEQDIKVSIAFDLDCFTLNSATSNHDLKMLKPMIEFLQAVNSTFSLIPSPRFSHFSDKSLNFVSSQLESMKKLGFFNHNNIINIATIIPKERKITTRKLSVTTIPIKPTPIPEIAQPPLDFPAGSPYPAPYNVPNSKPLPPLAQIPSVPDETLQEALDYACGEGGADCLEITTPQGNCYNPDTLVAHASYAFNSYWQKHKRIGGTCDFGGTAMLIHSDPSFLHCRFILS*