Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375060 | AES63128.1 | 98.133 | 375 | 1 | 1 | 130 | 498 | 1 | 375 | 0.0 | 738 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375060 | G7IL59 | 98.133 | 375 | 1 | 1 | 130 | 498 | 1 | 375 | 0.0 | 738 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1351640 | Msa1375060 | 0.985938 | 3.786601e-165 | -8.615850e-47 |
| Msa1375060 | Msa1392330 | 0.999088 | 1.317828e-289 | -8.615850e-47 |
| Msa1375060 | Msa1452090 | 0.815595 | 8.528268e-52 | -8.615850e-47 |
| Msa1375060 | Msa1460820 | 0.998744 | 5.042029e-275 | -8.615850e-47 |
| Msa0131050 | Msa1375060 | 0.846281 | 2.397275e-59 | -8.615850e-47 |
| Msa0138390 | Msa1375060 | 0.839339 | 1.681518e-57 | -8.615850e-47 |
| Msa0146990 | Msa1375060 | 0.810697 | 1.013135e-50 | -8.615850e-47 |
| Msa0376450 | Msa1375060 | 0.815735 | 7.938067e-52 | -8.615850e-47 |
| Msa0465800 | Msa1375060 | -0.810958 | 8.897128e-51 | -8.615850e-47 |
| Msa0471720 | Msa1375060 | 0.817110 | 3.907377e-52 | -8.615850e-47 |
| Msa0472740 | Msa1375060 | -0.813865 | 2.061673e-51 | -8.615850e-47 |
| Msa1009440 | Msa1375060 | 0.817317 | 3.510998e-52 | -8.615850e-47 |
| Msa1050780 | Msa1375060 | 0.805389 | 1.367017e-49 | -8.615850e-47 |
| Msa1098180 | Msa1375060 | 0.888310 | 6.612436e-73 | -8.615850e-47 |
| Msa0240450 | Msa1375060 | 0.835239 | 1.883795e-56 | -8.615850e-47 |
| Msa0270030 | Msa1375060 | 0.987050 | 7.002399e-169 | -8.615850e-47 |
| Msa1119250 | Msa1375060 | 0.851267 | 9.919923e-61 | -8.615850e-47 |
| Msa1119300 | Msa1375060 | 0.854955 | 8.720039e-62 | -8.615850e-47 |
| Msa1138240 | Msa1375060 | 0.872013 | 4.406402e-67 | -8.615850e-47 |
| Msa0516510 | Msa1375060 | 0.813909 | 2.016063e-51 | -8.615850e-47 |
| Msa0967650 | Msa1375060 | 0.817652 | 2.950924e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375060 | MtrunA17_Chr2g0276811 | 85.067 | 375 | 2 | 2 | 130 | 498 | 1 | 327 | 0.0 | 594 |
| Msa1375060 | MtrunA17_Chr4g0042531 | 63.784 | 370 | 90 | 3 | 105 | 441 | 4 | 362 | 1.05e-157 | 452 |
| Msa1375060 | MtrunA17_Chr4g0042541 | 65.217 | 368 | 83 | 4 | 105 | 438 | 4 | 360 | 1.74e-157 | 452 |
| Msa1375060 | MtrunA17_Chr2g0276801 | 89.000 | 100 | 9 | 2 | 1 | 99 | 13 | 111 | 1.46e-51 | 171 |
| Msa1375060 | MtrunA17_Chr3g0127551 | 29.431 | 299 | 164 | 7 | 132 | 396 | 7 | 292 | 1.89e-19 | 89.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375060 | AT1G57680.3 | 49.429 | 350 | 139 | 4 | 130 | 442 | 1 | 349 | 3.11e-96 | 295 |
| Msa1375060 | AT1G57680.1 | 49.429 | 350 | 139 | 4 | 130 | 442 | 1 | 349 | 3.11e-96 | 295 |
| Msa1375060 | AT1G57680.2 | 49.429 | 350 | 139 | 4 | 130 | 442 | 1 | 349 | 3.11e-96 | 295 |
Find 127 sgRNAs with CRISPR-Local
Find 431 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCACTTGTATGTTGTTC+TGG | 0.136495 | tig0019619:-35319 | Msa1375060:CDS |
| CCATTATTAGTTATTGATAT+TGG | 0.198785 | tig0019619:-36219 | Msa1375060:intron |
| CACAAGCCCCAGAGGATTTC+TGG | 0.199571 | tig0019619:-36188 | Msa1375060:CDS |
| GTTGAATAAAACCTTGATTA+TGG | 0.209985 | tig0019619:+36001 | None:intergenic |
| CAAGACAACAACTACGACTA+TGG | 0.236213 | tig0019619:-40899 | Msa1375060:CDS |
| TTACTTAGTACCGTTCTTCT+TGG | 0.246463 | tig0019619:-35550 | Msa1375060:CDS |
| TTTGTGTTTCCTTCCATTAA+GGG | 0.263956 | tig0019619:-35416 | Msa1375060:CDS |
| TGTTTATGGCATTCCGGTTC+TGG | 0.270261 | tig0019619:-40804 | Msa1375060:CDS |
| TCTGTTTCAGAACCTGTTTA+TGG | 0.277422 | tig0019619:-40818 | Msa1375060:CDS |
| GACGTGCCCTTCACTTAAAA+TGG | 0.278233 | tig0019619:-35882 | Msa1375060:CDS |
| ACTTCTTCAAGCCATGAAAA+TGG | 0.296134 | tig0019619:+40926 | None:intergenic |
| AGCTGATGGCTGGGTGGTAC+TGG | 0.305412 | tig0019619:+40961 | Msa1375070:intron |
| ACCTCAGTTAGACAAGAATA+AGG | 0.305847 | tig0019619:-35650 | Msa1375060:CDS |
| GGGGTCTAGGTGAAATTATT+AGG | 0.311728 | tig0019619:-35918 | Msa1375060:intron |
| CTGGAATTATGAGCAGAAAA+TGG | 0.319368 | tig0019619:-35750 | Msa1375060:CDS |
| GAATGCTTCGGCAGCAAATC+TGG | 0.324517 | tig0019619:+36110 | None:intergenic |
| TTGCACTTGTATGTTGTTCT+GGG | 0.341889 | tig0019619:-35318 | Msa1375060:CDS |
| CATGCGTGGAATCTGTATTT+CGG | 0.345778 | tig0019619:-36146 | Msa1375060:CDS |
| CCCGGATCACCGTCACTTCC+AGG | 0.354198 | tig0019619:-34992 | Msa1375060:CDS |
| GTAAGTGTGGAGCTGATGGC+TGG | 0.370131 | tig0019619:+40951 | Msa1375070:intron |
| TCAACAAAGGTTTACAGAAA+AGG | 0.373868 | tig0019619:-35462 | Msa1375060:CDS |
| ATGCGTGGAATCTGTATTTC+GGG | 0.375518 | tig0019619:-36145 | Msa1375060:CDS |
| CAACAAAGGTTTACAGAAAA+GGG | 0.378116 | tig0019619:-35461 | Msa1375060:CDS |
| CAAACCAAGAAGAATCAAAA+TGG | 0.383211 | tig0019619:+36062 | None:intergenic |
| CTCTCTGTCAGTGCCAGAAC+CGG | 0.384564 | tig0019619:+40791 | None:intergenic |
| GGGTGGTGTTGCACTACGGC+TGG | 0.385070 | tig0019619:+35012 | None:intergenic |
| ACCTGGAAGTGACGGTGATC+CGG | 0.386511 | tig0019619:+34991 | None:intergenic |
| TATCACTAGCCAGAGTCATT+TGG | 0.389755 | tig0019619:-35176 | Msa1375060:CDS |
| AGTTGCAGATTGTTTAGCTC+TGG | 0.392033 | tig0019619:-35266 | Msa1375060:CDS |
| AAGTCAGGATAATGGCAAAA+AGG | 0.395416 | tig0019619:+35527 | None:intergenic |
| GAAAAGGGTGTTGCTTCAAC+TGG | 0.400149 | tig0019619:-35064 | Msa1375060:CDS |
| CCTGGAAGTGACGGTGATCC+GGG | 0.407160 | tig0019619:+34992 | None:intergenic |
| ATTCATGTTGCCACCAGAAA+TGG | 0.409650 | tig0019619:-40873 | Msa1375060:CDS |
| ATGGCACAATAACTTGGGTT+GGG | 0.415265 | tig0019619:+34954 | None:intergenic |
| CAATGGTGGCACGGTGGATG+TGG | 0.426793 | tig0019619:+40998 | Msa1375070:intron |
| CACCATCTTGTGCTTGACTT+GGG | 0.429863 | tig0019619:+40843 | None:intergenic |
| AGATTTGCTGCCGAAGCATT+CGG | 0.431030 | tig0019619:-36108 | Msa1375060:CDS |
| AACTTGGGTTGGGGATTGCA+TGG | 0.433060 | tig0019619:+34964 | None:intergenic |
| AATGACTCTGGCTAGTGATA+AGG | 0.433949 | tig0019619:+35179 | None:intergenic |
| ACACCATCTTGTGCTTGACT+TGG | 0.438856 | tig0019619:+40842 | None:intergenic |
| ATGACTCTGGCTAGTGATAA+GGG | 0.438994 | tig0019619:+35180 | None:intergenic |
| CCGTGCACCCTTGCAGAGGT+TGG | 0.447505 | tig0019619:-35776 | Msa1375060:CDS |
| CGCTCTCGAATCCATAATCA+AGG | 0.454403 | tig0019619:-36012 | Msa1375060:intron |
| GCTGCTATGGCACAATAACT+TGG | 0.457884 | tig0019619:+34948 | None:intergenic |
| CCCTTGCAGAGGTTGGAGAC+TGG | 0.459243 | tig0019619:-35769 | Msa1375060:CDS |
| GAAATACAAGTGTGAGGAAG+AGG | 0.466208 | tig0019619:+35803 | None:intergenic |
| AGAACCTGTTTATGGCATTC+CGG | 0.468495 | tig0019619:-40810 | Msa1375060:CDS |
| CATGGATACCAGAAATCCTC+TGG | 0.469355 | tig0019619:+36180 | None:intergenic |
| GAAGAACGGTACTAAGTAAA+GGG | 0.471576 | tig0019619:+35554 | None:intergenic |
| CTTCGGCAGCAAATCTGGAC+AGG | 0.473877 | tig0019619:+36115 | None:intergenic |
| AGAGCTAAACAATCTGCAAC+TGG | 0.476529 | tig0019619:+35268 | None:intergenic |
| AGAACCGGAATGCCATAAAC+AGG | 0.478656 | tig0019619:+40806 | None:intergenic |
| GCACTGACAGAGAGATCAAC+AGG | 0.479490 | tig0019619:-40782 | Msa1375060:intron |
| ACCATCTTGTGCTTGACTTG+GGG | 0.487601 | tig0019619:+40844 | None:intergenic |
| GTTGCAGATTGTTTAGCTCT+GGG | 0.488179 | tig0019619:-35265 | Msa1375060:CDS |
| AGAAGAACGGTACTAAGTAA+AGG | 0.495985 | tig0019619:+35553 | None:intergenic |
| GGGGATTGCATGGGCCAACC+TGG | 0.496851 | tig0019619:+34974 | None:intergenic |
| TATGGCACAATAACTTGGGT+TGG | 0.509350 | tig0019619:+34953 | None:intergenic |
| AAGGTAGGAAGTCAGGATAA+TGG | 0.511696 | tig0019619:+35519 | None:intergenic |
| TGTCACCACACCGAATGCTT+CGG | 0.512183 | tig0019619:+36098 | None:intergenic |
| TGGCACAATAACTTGGGTTG+GGG | 0.518698 | tig0019619:+34955 | None:intergenic |
| CCTCAGTTAGACAAGAATAA+GGG | 0.519352 | tig0019619:-35649 | Msa1375060:CDS |
| TAAGTGTGGAGCTGATGGCT+GGG | 0.529852 | tig0019619:+40952 | Msa1375070:intron |
| GAAAATGCCCGGCTTAGTCC+TGG | 0.529972 | tig0019619:-35139 | Msa1375060:CDS |
| CATTATCTTCCAAATGACTC+TGG | 0.530554 | tig0019619:+35167 | None:intergenic |
| CCAACCTCTGCAAGGGTGCA+CGG | 0.530849 | tig0019619:+35776 | None:intergenic |
| GCTTCAAACATAAAATGCTC+AGG | 0.535570 | tig0019619:+35361 | None:intergenic |
| AAAAGCTGAAGAAGAAACAT+TGG | 0.535607 | tig0019619:+35688 | None:intergenic |
| GGTGGTGTTGCACTACGGCT+GGG | 0.535611 | tig0019619:+35013 | None:intergenic |
| TGATGGCTGGGTGGTACTGG+TGG | 0.539099 | tig0019619:+40964 | Msa1375070:intron |
| TCCTCCGTGCACCCTTGCAG+AGG | 0.540397 | tig0019619:-35780 | Msa1375060:CDS |
| ACTTGGGTTGGGGATTGCAT+GGG | 0.547759 | tig0019619:+34965 | None:intergenic |
| AATACCTACCAGGACTAAGC+CGG | 0.548682 | tig0019619:+35131 | None:intergenic |
| TCCAGTCTCCAACCTCTGCA+AGG | 0.553487 | tig0019619:+35768 | None:intergenic |
| CACTACGGCTGGGAGAGAAA+AGG | 0.561488 | tig0019619:+35023 | None:intergenic |
| ATCTACAAGACTTGGAAGCT+AGG | 0.563095 | tig0019619:-35240 | Msa1375060:CDS |
| ATCCGGGTGGTGTTGCACTA+CGG | 0.565464 | tig0019619:+35008 | None:intergenic |
| CCATCTTGTGCTTGACTTGG+GGG | 0.568482 | tig0019619:+40845 | None:intergenic |
| AGCCGTAGTGCAACACCACC+CGG | 0.570029 | tig0019619:-35010 | Msa1375060:CDS |
| TGCCCTTCACTTAAAATGGA+AGG | 0.570691 | tig0019619:-35878 | Msa1375060:CDS |
| TAAGTAAAGGGTAAGTACAC+AGG | 0.570980 | tig0019619:+35566 | None:intergenic |
| ATGTTATATTGTATCCAACA+TGG | 0.571201 | tig0019619:-35842 | Msa1375060:CDS |
| AAGACAACAACTACGACTAT+GGG | 0.571778 | tig0019619:-40898 | Msa1375060:CDS |
| TCTGGGAAATCTACAAGACT+TGG | 0.572100 | tig0019619:-35248 | Msa1375060:CDS |
| ATGGATACCAGAAATCCTCT+GGG | 0.580053 | tig0019619:+36181 | None:intergenic |
| TTCGGCAGCAAATCTGGACA+GGG | 0.581106 | tig0019619:+36116 | None:intergenic |
| GATTCATCTGAATACCTACC+AGG | 0.582625 | tig0019619:+35121 | None:intergenic |
| TTGAAATTAGTCATCAACAA+AGG | 0.583602 | tig0019619:-35475 | Msa1375060:CDS |
| TGTTATATTGTATCCAACAT+GGG | 0.587232 | tig0019619:-35841 | Msa1375060:CDS |
| ATACCTACCAGGACTAAGCC+GGG | 0.594514 | tig0019619:+35132 | None:intergenic |
| GATCACCGTCACTTCCAGGT+TGG | 0.595185 | tig0019619:-34988 | Msa1375060:CDS |
| TCAGATGAATCAACAAAGCG+TGG | 0.595190 | tig0019619:-35109 | Msa1375060:CDS |
| ACGCATGCTCTCTGACAGCA+TGG | 0.601326 | tig0019619:+36162 | None:intergenic |
| CCAGTCTCCAACCTCTGCAA+GGG | 0.602446 | tig0019619:+35769 | None:intergenic |
| GGAGGTAAGTGTGGAGCTGA+TGG | 0.602790 | tig0019619:+40947 | Msa1375070:intron |
| CTGCTATGGCACAATAACTT+GGG | 0.603852 | tig0019619:+34949 | None:intergenic |
| TGGTGGAGCAAGAGCAACAA+TGG | 0.604648 | tig0019619:+40981 | Msa1375070:intron |
| ACTTGGAAGCTAGGACTAGG+AGG | 0.606767 | tig0019619:-35231 | Msa1375060:CDS |
| ATGCTGTCAGAGAGCATGCG+TGG | 0.609403 | tig0019619:-36160 | Msa1375060:CDS |
| CTTGATTATGGATTCGAGAG+CGG | 0.616039 | tig0019619:+36013 | None:intergenic |
| TGGTGGCACGGTGGATGTGG+AGG | 0.618087 | tig0019619:+41001 | Msa1375070:intron |
| CCCTTATTCTTGTCTAACTG+AGG | 0.619051 | tig0019619:+35649 | None:intergenic |
| GCTGAAGAAGAAACATTGGA+AGG | 0.623753 | tig0019619:+35692 | None:intergenic |
| AAGTAAAGGGTAAGTACACA+GGG | 0.626323 | tig0019619:+35567 | None:intergenic |
| CAAGAGCAACAATGGTGGCA+CGG | 0.627648 | tig0019619:+40989 | Msa1375070:intron |
| ATAATGTTGAGGAAAATGCC+CGG | 0.641939 | tig0019619:-35150 | Msa1375060:CDS |
| AAGACTTGGAAGCTAGGACT+AGG | 0.643546 | tig0019619:-35234 | Msa1375060:CDS |
| TCTTCAAGCCATGAAAATGG+AGG | 0.647955 | tig0019619:+40929 | None:intergenic |
| AGGTTCTGCAAATCCCATGT+TGG | 0.653113 | tig0019619:+35828 | None:intergenic |
| CATGAAAATGGAGGTAAGTG+TGG | 0.654055 | tig0019619:+40938 | None:intergenic |
| CTAAACAATCTGCAACTGGA+CGG | 0.656325 | tig0019619:+35272 | None:intergenic |
| TCATTTGGAAGATAATGTTG+AGG | 0.658087 | tig0019619:-35161 | Msa1375060:CDS |
| GTGTGGAGCTGATGGCTGGG+TGG | 0.664412 | tig0019619:+40955 | Msa1375070:intron |
| CAGATGAATCAACAAAGCGT+GGG | 0.669113 | tig0019619:-35108 | Msa1375060:CDS |
| TCGGCAGCAAATCTGGACAG+GGG | 0.670257 | tig0019619:+36117 | None:intergenic |
| ATGGGCCAACCTGGAAGTGA+CGG | 0.673283 | tig0019619:+34983 | None:intergenic |
| AAGAAAAGCCAAGAAAACAA+AGG | 0.675305 | tig0019619:+35339 | None:intergenic |
| ACAAGTGTGAGGAAGAGGCA+AGG | 0.681559 | tig0019619:+35808 | None:intergenic |
| TGGAGCAAGAGCAACAATGG+TGG | 0.690481 | tig0019619:+40984 | Msa1375070:intron |
| GCTGTGCTTGTAAAATAATG+CGG | 0.697719 | tig0019619:+35610 | None:intergenic |
| GGAGGAGAAATACAAGTGTG+AGG | 0.697754 | tig0019619:+35797 | None:intergenic |
| TGCTGCCGAAGCATTCGGTG+TGG | 0.699184 | tig0019619:-36103 | Msa1375060:CDS |
| GAGCAACAATGGTGGCACGG+TGG | 0.703864 | tig0019619:+40992 | Msa1375070:intron |
| ACCTCTGCAAGGGTGCACGG+AGG | 0.720964 | tig0019619:+35779 | None:intergenic |
| ATGCCCGGCTTAGTCCTGGT+AGG | 0.725216 | tig0019619:-35135 | Msa1375060:CDS |
| GGAAGTGACGGTGATCCGGG+TGG | 0.749090 | tig0019619:+34995 | None:intergenic |
| TGGATACCAGAAATCCTCTG+GGG | 0.759997 | tig0019619:+36182 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTAGATACATATTT+GGG | + | tig0019619:35693-35712 | None:intergenic | 10.0% |
| !!! | AATTTTTTTAGATACATATT+TGG | + | tig0019619:35694-35713 | None:intergenic | 10.0% |
| !!! | ATCAATTTTTAAATTTTGAA+AGG | - | tig0019619:37631-37650 | Msa1375060:intron | 10.0% |
| !!! | TCAATTTTTAAATTTTGAAA+GGG | - | tig0019619:37632-37651 | Msa1375060:intron | 10.0% |
| !!! | TTCAAATTTCTAGTAAATAA+CGG | + | tig0019619:35382-35401 | None:intergenic | 15.0% |
| !!! | TAAAATTGTTGATTACAAAA+AGG | - | tig0019619:36219-36238 | Msa1375060:intron | 15.0% |
| !!! | TCATAATTTTTTTTCTTTTG+AGG | - | tig0019619:37064-37083 | Msa1375060:intron | 15.0% |
| !! | ATTTAAAAATTGATTATAGG+TGG | + | tig0019619:37625-37644 | None:intergenic | 15.0% |
| !!! | TCACAAAAATTTTCTAAAAT+TGG | - | tig0019619:37937-37956 | Msa1375060:intron | 15.0% |
| !! | AAATAAAATATACAGAGAAA+AGG | - | tig0019619:38188-38207 | Msa1375060:intron | 15.0% |
| !! | AATAAAATATACAGAGAAAA+GGG | - | tig0019619:38189-38208 | Msa1375060:intron | 15.0% |
| !! | ATTCATTCATTTAAATTGAT+AGG | + | tig0019619:38682-38701 | None:intergenic | 15.0% |
| !! | GAATTCCAAATAATTATATA+GGG | + | tig0019619:39331-39350 | None:intergenic | 15.0% |
| !! | TGAATTCCAAATAATTATAT+AGG | + | tig0019619:39332-39351 | None:intergenic | 15.0% |
| !!! | TCAAATTTCTAGTAAATAAC+GGG | + | tig0019619:35381-35400 | None:intergenic | 20.0% |
| !! | ATGAAGAAAAGAACAATATT+TGG | + | tig0019619:35440-35459 | None:intergenic | 20.0% |
| !! | TAAGAACTTAAGTGAAAAAA+AGG | + | tig0019619:35632-35651 | None:intergenic | 20.0% |
| !! | TGATTACAAAAAGGTTAATA+TGG | - | tig0019619:36228-36247 | Msa1375060:intron | 20.0% |
| !! | GAAGTCAGAATTTAATAATA+TGG | - | tig0019619:36714-36733 | Msa1375060:intron | 20.0% |
| !! | TTTCAATGCTTATATTATTG+AGG | - | tig0019619:37596-37615 | Msa1375060:intron | 20.0% |
| !! | AGAAGAATAAAAACAAACAT+AGG | - | tig0019619:37754-37773 | Msa1375060:intron | 20.0% |
| !! | GAAGAATAAAAACAAACATA+GGG | - | tig0019619:37755-37774 | Msa1375060:intron | 20.0% |
| !! | TTTCAAAATTTGTCAAAATG+TGG | + | tig0019619:37821-37840 | None:intergenic | 20.0% |
| !!! | TTGTTTTTGTCCAATAAAAA+TGG | - | tig0019619:37900-37919 | Msa1375060:intron | 20.0% |
| !! | ATATTAGAATCGTTAAGTTA+CGG | - | tig0019619:38739-38758 | Msa1375060:intron | 20.0% |
| !! | TAATTATATAGGGTTAAGAA+GGG | + | tig0019619:39321-39340 | None:intergenic | 20.0% |
| !! | ATAATTATATAGGGTTAAGA+AGG | + | tig0019619:39322-39341 | None:intergenic | 20.0% |
| !! | CTTAACCCTATATAATTATT+TGG | - | tig0019619:39323-39342 | Msa1375060:intron | 20.0% |
| !!! | TTGTTTTTAGATGTTTGAAT+TGG | - | tig0019619:39634-39653 | Msa1375060:intron | 20.0% |
| !!! | TGTTTTTAGATGTTTGAATT+GGG | - | tig0019619:39635-39654 | Msa1375060:intron | 20.0% |
| !! | CCAATATCAATAACTAATAA+TGG | + | tig0019619:39794-39813 | None:intergenic | 20.0% |
| !! | CCATTATTAGTTATTGATAT+TGG | - | tig0019619:39791-39810 | Msa1375060:intron | 20.0% |
| !! | AGTTATTGATATTGGAAAAA+AGG | - | tig0019619:39799-39818 | Msa1375060:intron | 20.0% |
| !!! | ATTCAACTCAATTATTTTAG+TGG | - | tig0019619:40025-40044 | Msa1375060:intron | 20.0% |
| !!! | TTTGGATGTGTTTTTAGTTT+TGG | - | tig0019619:35255-35274 | Msa1375060:CDS | 25.0% |
| !!! | GACATAATTTGTCCATTTTA+AGG | - | tig0019619:36120-36139 | Msa1375060:CDS | 25.0% |
| !!! | ATTTGTCCATTTTAAGGATT+TGG | - | tig0019619:36126-36145 | Msa1375060:CDS | 25.0% |
| ! | TCATTTCCAAATCCTTAAAA+TGG | + | tig0019619:36135-36154 | None:intergenic | 25.0% |
| !!! | ACAATTTTAAGAATCTCTTC+AGG | + | tig0019619:36208-36227 | None:intergenic | 25.0% |
| !! | ATGTCGTTTAATAATACTAG+AGG | - | tig0019619:36323-36342 | Msa1375060:intron | 25.0% |
| ! | AAACAAACAAAGAACTTCAA+TGG | + | tig0019619:36390-36409 | None:intergenic | 25.0% |
| !! | CTTTTTGTTGATCTTTAATC+AGG | - | tig0019619:36590-36609 | Msa1375060:intron | 25.0% |
| !! | TGACTTCAAAGTCATATTTT+TGG | + | tig0019619:36701-36720 | None:intergenic | 25.0% |
| ! | ATAATGCATGAAAGAACAAT+TGG | + | tig0019619:36770-36789 | None:intergenic | 25.0% |
| !!! | TCTTCAGTTTAGTTTTAGAT+AGG | - | tig0019619:36856-36875 | Msa1375060:intron | 25.0% |
| ! | TTTCAACTATAGACTACTAT+TGG | + | tig0019619:37043-37062 | None:intergenic | 25.0% |
| ! | TTACATGAAGAACAAAAGAT+TGG | + | tig0019619:37131-37150 | None:intergenic | 25.0% |
| !!! | GACAATAAAGACTTGTTTTT+CGG | + | tig0019619:37235-37254 | None:intergenic | 25.0% |
| !!! | CACTATTTTCTTTTAACTGT+GGG | + | tig0019619:37378-37397 | None:intergenic | 25.0% |
| ! | ATTCCTAAATTCGTGATTAA+AGG | - | tig0019619:37502-37521 | Msa1375060:intron | 25.0% |
| !!! | ACAAGTTTCCTTTAAAACTT+GGG | + | tig0019619:37577-37596 | None:intergenic | 25.0% |
| !!! | AACAAGTTTCCTTTAAAACT+TGG | + | tig0019619:37578-37597 | None:intergenic | 25.0% |
| !!! | TTAAATTTTGAAAGGGAGTT+TGG | - | tig0019619:37639-37658 | Msa1375060:intron | 25.0% |
| !!! | CACTTTTTCTCCATTTTTAT+TGG | + | tig0019619:37913-37932 | None:intergenic | 25.0% |
| ! | CAATAAAAATGGAGAAAAAG+TGG | - | tig0019619:37911-37930 | Msa1375060:intron | 25.0% |
| !!! | TGTTTGGGTATTTTTTTTGA+TGG | + | tig0019619:37979-37998 | None:intergenic | 25.0% |
| ! | CAAATTCGCTAAAAACAAAA+AGG | + | tig0019619:38637-38656 | None:intergenic | 25.0% |
| !!! | CTTTTTGTTTTTAGCGAATT+TGG | - | tig0019619:38635-38654 | Msa1375060:intron | 25.0% |
| ! | TATTAGAATCGTTAAGTTAC+GGG | - | tig0019619:38740-38759 | Msa1375060:intron | 25.0% |
| ! | GTTGAATGATATGAATTGTT+TGG | - | tig0019619:38773-38792 | Msa1375060:intron | 25.0% |
| ! | ATATGAATTGTTTGGAAGTT+GGG | - | tig0019619:38781-38800 | Msa1375060:intron | 25.0% |
| ! | GTAAATAACACGTTTGATTA+GGG | + | tig0019619:39207-39226 | None:intergenic | 25.0% |
| ! | AGTAAATAACACGTTTGATT+AGG | + | tig0019619:39208-39227 | None:intergenic | 25.0% |
| !! | TAATAAAGAGAAAGCATGTA+TGG | + | tig0019619:39384-39403 | None:intergenic | 25.0% |
| ! | ACAAATCTCATTGAACAAAA+TGG | + | tig0019619:39588-39607 | None:intergenic | 25.0% |
| ! | GTTGAATAAAACCTTGATTA+TGG | + | tig0019619:40012-40031 | None:intergenic | 25.0% |
| ! | AATGCAATTCTAATAATCCA+AGG | + | tig0019619:40052-40071 | None:intergenic | 25.0% |
| !! | CATTCATCTTATTTGTAATC+TGG | - | tig0019619:40068-40087 | Msa1375060:intron | 25.0% |
| ! | ATGTTATATTGTATCCAACA+TGG | - | tig0019619:40168-40187 | Msa1375060:intron | 25.0% |
| ! | TGTTATATTGTATCCAACAT+GGG | - | tig0019619:40169-40188 | Msa1375060:intron | 25.0% |
| ! | TTGAAATTAGTCATCAACAA+AGG | - | tig0019619:40535-40554 | Msa1375060:intron | 25.0% |
| ! | ATTTGAAATTGTCAAGAGCT+TGG | - | tig0019619:35395-35414 | Msa1375060:CDS | 30.0% |
| !!! | ATTGTTTTAGCATGTGTGAT+TGG | - | tig0019619:35762-35781 | Msa1375060:CDS | 30.0% |
| ATGTTAGACCTTTAACATGA+AGG | - | tig0019619:35787-35806 | Msa1375060:CDS | 30.0% | |
| ATGAAGGAAACTGAGAAAAT+TGG | - | tig0019619:35803-35822 | Msa1375060:CDS | 30.0% | |
| CAAGATCAAACTTATGGTTA+TGG | - | tig0019619:35829-35848 | Msa1375060:CDS | 30.0% | |
| CATGCAAATTAAATCTCTCA+TGG | + | tig0019619:36003-36022 | None:intergenic | 30.0% | |
| !! | TTAATTTGCATGAGACATAG+TGG | - | tig0019619:36011-36030 | Msa1375060:intron | 30.0% |
| !! | TATGGATTGGAAAGTGTTTA+TGG | - | tig0019619:36039-36058 | Msa1375060:CDS | 30.0% |
| !! | ATGGATTGGAAAGTGTTTAT+GGG | - | tig0019619:36040-36059 | Msa1375060:CDS | 30.0% |
| ! | TTGATAGTAGATGAATGTGA+TGG | + | tig0019619:36085-36104 | None:intergenic | 30.0% |
| ! | GATCATGTCTGATTTTCTAA+TGG | - | tig0019619:36297-36316 | Msa1375060:intron | 30.0% |
| !! | AGAGGAATAATTTGCTTCTT+TGG | - | tig0019619:36341-36360 | Msa1375060:intron | 30.0% |
| !! | GAGGAATAATTTGCTTCTTT+GGG | - | tig0019619:36342-36361 | Msa1375060:intron | 30.0% |
| ! | AAAGTCAAAGCTCTAATTAG+AGG | + | tig0019619:36574-36593 | None:intergenic | 30.0% |
| !! | CATTGTTCTAAAACTCACTT+TGG | - | tig0019619:36810-36829 | Msa1375060:intron | 30.0% |
| GAATTTGGATCATTTATGGA+AGG | + | tig0019619:37008-37027 | None:intergenic | 30.0% | |
| CTACTATTGGTCAAATTACT+CGG | + | tig0019619:37030-37049 | None:intergenic | 30.0% | |
| TACGAAAATGCTAGTAATGA+TGG | + | tig0019619:37165-37184 | None:intergenic | 30.0% | |
| TCGTAGAGATAAGACTTAAT+TGG | - | tig0019619:37180-37199 | Msa1375060:intron | 30.0% | |
| !! | AATAAAGACTTGTTTTTCGG+CGG | + | tig0019619:37232-37251 | None:intergenic | 30.0% |
| GGTTGTAAGATAAATCCTAA+AGG | + | tig0019619:37298-37317 | None:intergenic | 30.0% | |
| GGTTTAAGGGTAAACTTTAA+TGG | + | tig0019619:37319-37338 | None:intergenic | 30.0% | |
| !! | CCACTATTTTCTTTTAACTG+TGG | + | tig0019619:37379-37398 | None:intergenic | 30.0% |
| CCACAGTTAAAAGAAAATAG+TGG | - | tig0019619:37376-37395 | Msa1375060:intron | 30.0% | |
| ! | AAATAGTGGCAAGTTTTCAT+AGG | - | tig0019619:37390-37409 | Msa1375060:intron | 30.0% |
| ATGCCTTTAATCACGAATTT+AGG | + | tig0019619:37508-37527 | None:intergenic | 30.0% | |
| TTCAGAACTAATCGTAGTTA+TGG | + | tig0019619:37550-37569 | None:intergenic | 30.0% | |
| !! | TGAAAGATCCCAAGTTTTAA+AGG | - | tig0019619:37566-37585 | Msa1375060:intron | 30.0% |
| ! | TATTTCCTTCATTCACCTTT+TGG | + | tig0019619:38084-38103 | None:intergenic | 30.0% |
| TGAATGAAGGAAATAAGCAA+CGG | - | tig0019619:38089-38108 | Msa1375060:intron | 30.0% | |
| AAGAACAAACAAAAGAGACA+AGG | - | tig0019619:38145-38164 | Msa1375060:intron | 30.0% | |
| TATGACTATATTCAAGTCTC+CGG | + | tig0019619:38535-38554 | None:intergenic | 30.0% | |
| GTCATAGTAGTCATATTTGT+AGG | - | tig0019619:38549-38568 | Msa1375060:intron | 30.0% | |
| !! | GTCGTTTTATGCTATTAACA+TGG | - | tig0019619:38584-38603 | Msa1375060:intron | 30.0% |
| TGAATTTGTGAACAAACTCA+CGG | + | tig0019619:38613-38632 | None:intergenic | 30.0% | |
| GATATGAATTGTTTGGAAGT+TGG | - | tig0019619:38780-38799 | Msa1375060:intron | 30.0% | |
| ! | TGATGATGATGATGATGAAT+CGG | + | tig0019619:39258-39277 | None:intergenic | 30.0% |
| ! | AATCAATCTTAGAGCATTTC+TGG | - | tig0019619:39659-39678 | Msa1375060:intron | 30.0% |
| !!! | TCAATTATTTTAGTGGTCCT+TGG | - | tig0019619:40032-40051 | Msa1375060:intron | 30.0% |
| ! | TCATCTTATTTGTAATCTGG+TGG | - | tig0019619:40071-40090 | Msa1375060:intron | 30.0% |
| ! | CATCTTATTTGTAATCTGGT+GGG | - | tig0019619:40072-40091 | Msa1375060:intron | 30.0% |
| ! | ATCTTATTTGTAATCTGGTG+GGG | - | tig0019619:40073-40092 | Msa1375060:intron | 30.0% |
| !! | TTCCTTCCATTTTAAGTGAA+GGG | + | tig0019619:40137-40156 | None:intergenic | 30.0% |
| !! | TTTCCTTCCATTTTAAGTGA+AGG | + | tig0019619:40138-40157 | None:intergenic | 30.0% |
| AAAAGCTGAAGAAGAAACAT+TGG | + | tig0019619:40325-40344 | None:intergenic | 30.0% | |
| !! | TCTTCAGCTTTTTGTCATTT+TGG | - | tig0019619:40333-40352 | Msa1375060:intron | 30.0% |
| !! | ATTATTTTACAAGCACAGCA+AGG | - | tig0019619:40404-40423 | Msa1375060:intron | 30.0% |
| !! | TTATTTTACAAGCACAGCAA+GGG | - | tig0019619:40405-40424 | Msa1375060:intron | 30.0% |
| TCAACAAAGGTTTACAGAAA+AGG | - | tig0019619:40548-40567 | Msa1375060:intron | 30.0% | |
| CAACAAAGGTTTACAGAAAA+GGG | - | tig0019619:40549-40568 | Msa1375060:intron | 30.0% | |
| ! | TTTTGTGTTTCCTTCCATTA+AGG | - | tig0019619:40593-40612 | Msa1375060:intron | 30.0% |
| TTTGTGTTTCCTTCCATTAA+GGG | - | tig0019619:40594-40613 | Msa1375060:intron | 30.0% | |
| ! | CTTGGTTTATCTGTTTTATC+TGG | - | tig0019619:40625-40644 | Msa1375060:intron | 30.0% |
| AAGAAAAGCCAAGAAAACAA+AGG | + | tig0019619:40674-40693 | None:intergenic | 30.0% | |
| TCATTTGGAAGATAATGTTG+AGG | - | tig0019619:40849-40868 | Msa1375060:CDS | 30.0% | |
| ! | CTTCTTCTTCCTGTTCTTTT+TGG | + | tig0019619:34962-34981 | None:intergenic | 35.0% |
| ACTTCTTCAAGCCATGAAAA+TGG | + | tig0019619:35087-35106 | None:intergenic | 35.0% | |
| AAGACAACAACTACGACTAT+GGG | - | tig0019619:35112-35131 | Msa1375060:CDS | 35.0% | |
| TCTGTTTCAGAACCTGTTTA+TGG | - | tig0019619:35192-35211 | Msa1375060:CDS | 35.0% | |
| ! | TGAAAAAAAGGCAAGAGTGT+GGG | + | tig0019619:35620-35639 | None:intergenic | 35.0% |
| CTCAGTTTCCTTCATGTTAA+AGG | + | tig0019619:35798-35817 | None:intergenic | 35.0% | |
| TGGCATCAAGATCAAACTTA+TGG | - | tig0019619:35823-35842 | Msa1375060:CDS | 35.0% | |
| TAGTAGATGAATGTGATGGT+CGG | + | tig0019619:36081-36100 | None:intergenic | 35.0% | |
| !! | CTGAAGGAAACATGTTTTGA+TGG | + | tig0019619:36525-36544 | None:intergenic | 35.0% |
| TTAGATAGGAAGACCACATA+TGG | - | tig0019619:36870-36889 | Msa1375060:intron | 35.0% | |
| TAGATAGGAAGACCACATAT+GGG | - | tig0019619:36871-36890 | Msa1375060:intron | 35.0% | |
| !! | ATGGGCAAGTTTTATGGATA+AGG | - | tig0019619:36889-36908 | Msa1375060:intron | 35.0% |
| !! | GCAAGTTTTATGGATAAGGA+AGG | - | tig0019619:36893-36912 | Msa1375060:intron | 35.0% |
| GAAAGAAACTTCATCGATCT+TGG | - | tig0019619:36964-36983 | Msa1375060:intron | 35.0% | |
| CTCGGAATTTGGATCATTTA+TGG | + | tig0019619:37012-37031 | None:intergenic | 35.0% | |
| TGGTCAAATTACTCGGAATT+TGG | + | tig0019619:37023-37042 | None:intergenic | 35.0% | |
| GATCATAAAGTTCAAGGTTG+GGG | + | tig0019619:37095-37114 | None:intergenic | 35.0% | |
| CGATCATAAAGTTCAAGGTT+GGG | + | tig0019619:37096-37115 | None:intergenic | 35.0% | |
| TCGATCATAAAGTTCAAGGT+TGG | + | tig0019619:37097-37116 | None:intergenic | 35.0% | |
| CAGTTCGATCATAAAGTTCA+AGG | + | tig0019619:37101-37120 | None:intergenic | 35.0% | |
| ATGAAGAACAAAAGATTGGC+AGG | + | tig0019619:37127-37146 | None:intergenic | 35.0% | |
| AGATAAATCCTAAAGGAGCA+TGG | + | tig0019619:37291-37310 | None:intergenic | 35.0% | |
| GTGTGAAGTTGAAGGTTTAA+GGG | + | tig0019619:37332-37351 | None:intergenic | 35.0% | |
| TGTGTGAAGTTGAAGGTTTA+AGG | + | tig0019619:37333-37352 | None:intergenic | 35.0% | |
| !! | CTTTTAACTGTGGGCTAATA+GGG | + | tig0019619:37369-37388 | None:intergenic | 35.0% |
| !! | TCTTTTAACTGTGGGCTAAT+AGG | + | tig0019619:37370-37389 | None:intergenic | 35.0% |
| ! | CATTAGCAATTCTTGGTTCT+TGG | + | tig0019619:37439-37458 | None:intergenic | 35.0% |
| CAAGAACCAAGAATTGCTAA+TGG | - | tig0019619:37437-37456 | Msa1375060:intron | 35.0% | |
| CTTGAACCATTAGCAATTCT+TGG | + | tig0019619:37446-37465 | None:intergenic | 35.0% | |
| CAAGAATTGCTAATGGTTCA+AGG | - | tig0019619:37444-37463 | Msa1375060:intron | 35.0% | |
| CTGGAAAAAATCTTGAAAGG+CGG | + | tig0019619:37471-37490 | None:intergenic | 35.0% | |
| !!! | GCCTTTCAAGATTTTTTCCA+GGG | - | tig0019619:37470-37489 | Msa1375060:intron | 35.0% |
| ACCCTGGAAAAAATCTTGAA+AGG | + | tig0019619:37474-37493 | None:intergenic | 35.0% | |
| !!! | TGTTTTCTTGTTTTGCTCCT+TGG | + | tig0019619:37728-37747 | None:intergenic | 35.0% |
| ! | TCCTTTCTCTCTAGGTTTTT+GGG | + | tig0019619:38019-38038 | None:intergenic | 35.0% |
| TAACACCAAAAGGTGAATGA+AGG | - | tig0019619:38076-38095 | Msa1375060:intron | 35.0% | |
| AACAAAAGAGACAAGGACAA+AGG | - | tig0019619:38152-38171 | Msa1375060:intron | 35.0% | |
| ACAAAAGAGACAAGGACAAA+GGG | - | tig0019619:38153-38172 | Msa1375060:intron | 35.0% | |
| GAGAAGAGAAAGGAAGAAAT+GGG | + | tig0019619:38301-38320 | None:intergenic | 35.0% | |
| TGAGAAGAGAAAGGAAGAAA+TGG | + | tig0019619:38302-38321 | None:intergenic | 35.0% | |
| TCAGAGACAAGAAGAAGAAA+GGG | + | tig0019619:38340-38359 | None:intergenic | 35.0% | |
| TTCAGAGACAAGAAGAAGAA+AGG | + | tig0019619:38341-38360 | None:intergenic | 35.0% | |
| AAATAAACACCGCACTAAGA+CGG | + | tig0019619:38415-38434 | None:intergenic | 35.0% | |
| CCAAAGTCATTGTCATTGAT+CGG | + | tig0019619:38476-38495 | None:intergenic | 35.0% | |
| TGAATGAATGTGTGATGAGT+GGG | + | tig0019619:38921-38940 | None:intergenic | 35.0% | |
| ATGAATGAATGTGTGATGAG+TGG | + | tig0019619:38922-38941 | None:intergenic | 35.0% | |
| TTGCTCCATTCTCTGAATTA+GGG | - | tig0019619:39014-39033 | Msa1375060:intron | 35.0% | |
| GAAAACCCTAATTCAGAGAA+TGG | + | tig0019619:39022-39041 | None:intergenic | 35.0% | |
| TAACACGTTTGATTAGGGTA+GGG | + | tig0019619:39202-39221 | None:intergenic | 35.0% | |
| ATAACACGTTTGATTAGGGT+AGG | + | tig0019619:39203-39222 | None:intergenic | 35.0% | |
| CGGTACTTATAGAATAGAAG+AGG | + | tig0019619:39238-39257 | None:intergenic | 35.0% | |
| TGATTCTGATTCTTAGTGGA+TGG | + | tig0019619:39459-39478 | None:intergenic | 35.0% | |
| !! | CTACTGATTCTGATTCTTAG+TGG | + | tig0019619:39463-39482 | None:intergenic | 35.0% |
| ! | ACGAAGTAAGCATGGATTAT+GGG | + | tig0019619:39557-39576 | None:intergenic | 35.0% |
| ATGTAATCATCTACCCTTGA+TGG | - | tig0019619:39725-39744 | Msa1375060:intron | 35.0% | |
| CTGGAATTATGAGCAGAAAA+TGG | - | tig0019619:40260-40279 | Msa1375060:intron | 35.0% | |
| !!! | CAGCTTTTTGTCATTTTGGT+TGG | - | tig0019619:40337-40356 | Msa1375060:intron | 35.0% |
| ACCTCAGTTAGACAAGAATA+AGG | - | tig0019619:40360-40379 | Msa1375060:intron | 35.0% | |
| CCTCAGTTAGACAAGAATAA+GGG | - | tig0019619:40361-40380 | Msa1375060:intron | 35.0% | |
| GCTGTGCTTGTAAAATAATG+CGG | + | tig0019619:40403-40422 | None:intergenic | 35.0% | |
| ! | TATTTTACAAGCACAGCAAG+GGG | - | tig0019619:40406-40425 | Msa1375060:intron | 35.0% |
| AAGTAAAGGGTAAGTACACA+GGG | + | tig0019619:40446-40465 | None:intergenic | 35.0% | |
| TAAGTAAAGGGTAAGTACAC+AGG | + | tig0019619:40447-40466 | None:intergenic | 35.0% | |
| GAAGAACGGTACTAAGTAAA+GGG | + | tig0019619:40459-40478 | None:intergenic | 35.0% | |
| AGAAGAACGGTACTAAGTAA+AGG | + | tig0019619:40460-40479 | None:intergenic | 35.0% | |
| TTACTTAGTACCGTTCTTCT+TGG | - | tig0019619:40460-40479 | Msa1375060:intron | 35.0% | |
| ! | AAGTCAGGATAATGGCAAAA+AGG | + | tig0019619:40486-40505 | None:intergenic | 35.0% |
| GAAAAAGAACCCTTAATGGA+AGG | + | tig0019619:40606-40625 | None:intergenic | 35.0% | |
| CCAAGAAAAAGAACCCTTAA+TGG | + | tig0019619:40610-40629 | None:intergenic | 35.0% | |
| ! | CCATTAAGGGTTCTTTTTCT+TGG | - | tig0019619:40607-40626 | Msa1375060:intron | 35.0% |
| GCTTCAAACATAAAATGCTC+AGG | + | tig0019619:40652-40671 | None:intergenic | 35.0% | |
| !!! | GTTTGAAGCCTTTGTTTTCT+TGG | - | tig0019619:40663-40682 | Msa1375060:intron | 35.0% |
| TTGCACTTGTATGTTGTTCT+GGG | - | tig0019619:40692-40711 | Msa1375060:intron | 35.0% | |
| CATTATCTTCCAAATGACTC+TGG | + | tig0019619:40846-40865 | None:intergenic | 35.0% | |
| ATAATGTTGAGGAAAATGCC+CGG | - | tig0019619:40860-40879 | Msa1375060:CDS | 35.0% | |
| ! | GTCAATTTCTTTTCGGACAA+TGG | - | tig0019619:40924-40943 | Msa1375060:CDS | 35.0% |
| ! | TTCTTTTCGGACAATGGAAA+AGG | - | tig0019619:40930-40949 | Msa1375060:CDS | 35.0% |
| ! | TCTTTTCGGACAATGGAAAA+GGG | - | tig0019619:40931-40950 | Msa1375060:CDS | 35.0% |
| CATGAAAATGGAGGTAAGTG+TGG | + | tig0019619:35075-35094 | None:intergenic | 40.0% | |
| ! | CACACTTACCTCCATTTTCA+TGG | - | tig0019619:35073-35092 | Msa1375060:CDS | 40.0% |
| TCTTCAAGCCATGAAAATGG+AGG | + | tig0019619:35084-35103 | None:intergenic | 40.0% | |
| CAAGACAACAACTACGACTA+TGG | - | tig0019619:35111-35130 | Msa1375060:CDS | 40.0% | |
| ATTCATGTTGCCACCAGAAA+TGG | - | tig0019619:35137-35156 | Msa1375060:CDS | 40.0% | |
| AGAACCTGTTTATGGCATTC+CGG | - | tig0019619:35200-35219 | Msa1375060:CDS | 40.0% | |
| GAGAGATCAACAGGTCAATT+TGG | - | tig0019619:35237-35256 | Msa1375060:CDS | 40.0% | |
| GTTCGTCGAATGTGAAAACA+TGG | + | tig0019619:35306-35325 | None:intergenic | 40.0% | |
| ! | TAGTAAATAACGGGAGACAG+GGG | + | tig0019619:35372-35391 | None:intergenic | 40.0% |
| ! | CTAGTAAATAACGGGAGACA+GGG | + | tig0019619:35373-35392 | None:intergenic | 40.0% |
| ! | TCTAGTAAATAACGGGAGAC+AGG | + | tig0019619:35374-35393 | None:intergenic | 40.0% |
| !! | TTTTGAGTGAAACGCACGTA+AGG | + | tig0019619:35522-35541 | None:intergenic | 40.0% |
| ! | GAAAAAAAGGCAAGAGTGTG+GGG | + | tig0019619:35619-35638 | None:intergenic | 40.0% |
| GTGAAAAAAAGGCAAGAGTG+TGG | + | tig0019619:35621-35640 | None:intergenic | 40.0% | |
| ATGCTTTGCTTGCGATGATT+TGG | + | tig0019619:35864-35883 | None:intergenic | 40.0% | |
| ! | TGAGACATAGTGGAAACGTA+TGG | - | tig0019619:36021-36040 | Msa1375060:CDS | 40.0% |
| ! | CATAGTGGAAACGTATGGAT+TGG | - | tig0019619:36026-36045 | Msa1375060:CDS | 40.0% |
| ! | CTGATGAAAGCAAGTTCTGA+AGG | + | tig0019619:36541-36560 | None:intergenic | 40.0% |
| CCATAAAACTTGCCCATATG+TGG | + | tig0019619:36886-36905 | None:intergenic | 40.0% | |
| ! | CCACATATGGGCAAGTTTTA+TGG | - | tig0019619:36883-36902 | Msa1375060:intron | 40.0% |
| GATAAGGAAGGTAGAGTAAG+TGG | - | tig0019619:36905-36924 | Msa1375060:intron | 40.0% | |
| TTCTTTCCAGGAACTGCAAA+GGG | + | tig0019619:36951-36970 | None:intergenic | 40.0% | |
| TTTCTTTCCAGGAACTGCAA+AGG | + | tig0019619:36952-36971 | None:intergenic | 40.0% | |
| GATCGATGAAGTTTCTTTCC+AGG | + | tig0019619:36963-36982 | None:intergenic | 40.0% | |
| GAAACTTCATCGATCTTGGT+CGG | - | tig0019619:36968-36987 | Msa1375060:intron | 40.0% | |
| !! | TATGGAAGGCATTGATGACA+AGG | + | tig0019619:36994-37013 | None:intergenic | 40.0% |
| ACCCCATGAAATCTCTTAGT+GGG | + | tig0019619:37207-37226 | None:intergenic | 40.0% | |
| AACCCCATGAAATCTCTTAG+TGG | + | tig0019619:37208-37227 | None:intergenic | 40.0% | |
| TACAGTCTATAGTAGGAGAG+TGG | + | tig0019619:37260-37279 | None:intergenic | 40.0% | |
| GAAGGTTTGTGTGAAGTTGA+AGG | + | tig0019619:37340-37359 | None:intergenic | 40.0% | |
| !!! | CGCCTTTCAAGATTTTTTCC+AGG | - | tig0019619:37469-37488 | Msa1375060:intron | 40.0% |
| TTAGGAATCAACAACTACCC+TGG | + | tig0019619:37490-37509 | None:intergenic | 40.0% | |
| AGCATAAGACCTTTACCATG+AGG | - | tig0019619:37682-37701 | Msa1375060:intron | 40.0% | |
| TAAGACCTTTACCATGAGGA+TGG | - | tig0019619:37686-37705 | Msa1375060:intron | 40.0% | |
| ACCCAAAAACCTAGAGAGAA+AGG | - | tig0019619:38015-38034 | Msa1375060:intron | 40.0% | |
| ! | GTCCTTTCTCTCTAGGTTTT+TGG | + | tig0019619:38020-38039 | None:intergenic | 40.0% |
| TCTTGATGTCCTTTCTCTCT+AGG | + | tig0019619:38027-38046 | None:intergenic | 40.0% | |
| AGAGAGAAAGGACATCAAGA+AGG | - | tig0019619:38027-38046 | Msa1375060:intron | 40.0% | |
| CAGCACAAACTAACACCAAA+AGG | - | tig0019619:38066-38085 | Msa1375060:intron | 40.0% | |
| AAGGAAATAAGCAACGGAGA+AGG | - | tig0019619:38095-38114 | Msa1375060:intron | 40.0% | |
| CAGAGACAAGAAGAAGAAAG+GGG | + | tig0019619:38339-38358 | None:intergenic | 40.0% | |
| ! | TTTGATTTCCCGTCTTTGTG+CGG | - | tig0019619:38374-38393 | Msa1375060:intron | 40.0% |
| AAAAACACACCGCACAAAGA+CGG | + | tig0019619:38386-38405 | None:intergenic | 40.0% | |
| ! | TTTGATTTCCCGTCTTAGTG+CGG | - | tig0019619:38403-38422 | Msa1375060:intron | 40.0% |
| AATAAACACCGCACTAAGAC+GGG | + | tig0019619:38414-38433 | None:intergenic | 40.0% | |
| GTGCGGTGTTTATTTGATTC+AGG | - | tig0019619:38420-38439 | Msa1375060:intron | 40.0% | |
| CCGATCAATGACAATGACTT+TGG | - | tig0019619:38473-38492 | Msa1375060:intron | 40.0% | |
| ATCCGGAGATATGAGTATTC+CGG | - | tig0019619:38513-38532 | Msa1375060:intron | 40.0% | |
| GGATGAGAGGAAGAAAGAAA+AGG | - | tig0019619:38802-38821 | Msa1375060:intron | 40.0% | |
| GTTGCTCCATTCTCTGAATT+AGG | - | tig0019619:39013-39032 | Msa1375060:intron | 40.0% | |
| AAGGAAAAGAGAGCTTACAG+TGG | + | tig0019619:39103-39122 | None:intergenic | 40.0% | |
| AACACGTTTGATTAGGGTAG+GGG | + | tig0019619:39201-39220 | None:intergenic | 40.0% | |
| AGGGTTAAGAAGGGTTTGAT+GGG | + | tig0019619:39312-39331 | None:intergenic | 40.0% | |
| TAGGGTTAAGAAGGGTTTGA+TGG | + | tig0019619:39313-39332 | None:intergenic | 40.0% | |
| ! | GACGAAGTAAGCATGGATTA+TGG | + | tig0019619:39558-39577 | None:intergenic | 40.0% |
| TATCAAGCATCTAGCACTCT+TGG | + | tig0019619:39696-39715 | None:intergenic | 40.0% | |
| ! | AATCATCTACCCTTGATGGT+TGG | - | tig0019619:39729-39748 | Msa1375060:intron | 40.0% |
| TACGCATAACCAACCATCAA+GGG | + | tig0019619:39741-39760 | None:intergenic | 40.0% | |
| ATACGCATAACCAACCATCA+AGG | + | tig0019619:39742-39761 | None:intergenic | 40.0% | |
| ATGGATACCAGAAATCCTCT+GGG | + | tig0019619:39832-39851 | None:intergenic | 40.0% | |
| CATGCGTGGAATCTGTATTT+CGG | - | tig0019619:39864-39883 | Msa1375060:intron | 40.0% | |
| ATGCGTGGAATCTGTATTTC+GGG | - | tig0019619:39865-39884 | Msa1375060:intron | 40.0% | |
| CTTGATTATGGATTCGAGAG+CGG | + | tig0019619:40000-40019 | None:intergenic | 40.0% | |
| GGGGTCTAGGTGAAATTATT+AGG | - | tig0019619:40092-40111 | Msa1375060:intron | 40.0% | |
| TGCCCTTCACTTAAAATGGA+AGG | - | tig0019619:40132-40151 | Msa1375060:intron | 40.0% | |
| GAAATACAAGTGTGAGGAAG+AGG | + | tig0019619:40210-40229 | None:intergenic | 40.0% | |
| GCTGAAGAAGAAACATTGGA+AGG | + | tig0019619:40321-40340 | None:intergenic | 40.0% | |
| CCCTTATTCTTGTCTAACTG+AGG | + | tig0019619:40364-40383 | None:intergenic | 40.0% | |
| ! | ATTTTACAAGCACAGCAAGG+GGG | - | tig0019619:40407-40426 | Msa1375060:intron | 40.0% |
| AAGGTAGGAAGTCAGGATAA+TGG | + | tig0019619:40494-40513 | None:intergenic | 40.0% | |
| !!! | TCCTGACTTCCTACCTTTTT+TGG | - | tig0019619:40497-40516 | Msa1375060:intron | 40.0% |
| !!! | ACTTCCTACCTTTTTTGGCT+TGG | - | tig0019619:40502-40521 | Msa1375060:intron | 40.0% |
| ACTACCAAGCCAAAAAAGGT+AGG | + | tig0019619:40509-40528 | None:intergenic | 40.0% | |
| !!! | ACCTTTTTTGGCTTGGTAGT+CGG | - | tig0019619:40509-40528 | Msa1375060:intron | 40.0% |
| CTTGCACTTGTATGTTGTTC+TGG | - | tig0019619:40691-40710 | Msa1375060:intron | 40.0% | |
| CTAAACAATCTGCAACTGGA+CGG | + | tig0019619:40741-40760 | None:intergenic | 40.0% | |
| AGAGCTAAACAATCTGCAAC+TGG | + | tig0019619:40745-40764 | None:intergenic | 40.0% | |
| ! | AGTTGCAGATTGTTTAGCTC+TGG | - | tig0019619:40744-40763 | Msa1375060:intron | 40.0% |
| !! | GTTGCAGATTGTTTAGCTCT+GGG | - | tig0019619:40745-40764 | Msa1375060:intron | 40.0% |
| TCTGGGAAATCTACAAGACT+TGG | - | tig0019619:40762-40781 | Msa1375060:intron | 40.0% | |
| ATCTACAAGACTTGGAAGCT+AGG | - | tig0019619:40770-40789 | Msa1375060:intron | 40.0% | |
| ATGACTCTGGCTAGTGATAA+GGG | + | tig0019619:40833-40852 | None:intergenic | 40.0% | |
| AATGACTCTGGCTAGTGATA+AGG | + | tig0019619:40834-40853 | None:intergenic | 40.0% | |
| TATCACTAGCCAGAGTCATT+TGG | - | tig0019619:40834-40853 | Msa1375060:CDS | 40.0% | |
| GATTCATCTGAATACCTACC+AGG | + | tig0019619:40892-40911 | None:intergenic | 40.0% | |
| TCAGATGAATCAACAAAGCG+TGG | - | tig0019619:40901-40920 | Msa1375060:CDS | 40.0% | |
| CAGATGAATCAACAAAGCGT+GGG | - | tig0019619:40902-40921 | Msa1375060:CDS | 40.0% | |
| ! | AGCGTGGGTCAATTTCTTTT+CGG | - | tig0019619:40917-40936 | Msa1375060:CDS | 40.0% |
| ATGGCACAATAACTTGGGTT+GGG | + | tig0019619:41059-41078 | Msa1375070:intron | 40.0% | |
| TATGGCACAATAACTTGGGT+TGG | + | tig0019619:41060-41079 | Msa1375070:intron | 40.0% | |
| ! | ACCATCTTGTGCTTGACTTG+GGG | + | tig0019619:35169-35188 | None:intergenic | 45.0% |
| CACCATCTTGTGCTTGACTT+GGG | + | tig0019619:35170-35189 | None:intergenic | 45.0% | |
| ACACCATCTTGTGCTTGACT+TGG | + | tig0019619:35171-35190 | None:intergenic | 45.0% | |
| AGAACCGGAATGCCATAAAC+AGG | + | tig0019619:35207-35226 | None:intergenic | 45.0% | |
| TGTTTATGGCATTCCGGTTC+TGG | - | tig0019619:35206-35225 | Msa1375060:CDS | 45.0% | |
| ATCGCAAGCAAAGCATGATC+TGG | - | tig0019619:35868-35887 | Msa1375060:CDS | 45.0% | |
| CCAGGTTTGTCTTCTTCTGA+AGG | + | tig0019619:36467-36486 | None:intergenic | 45.0% | |
| CCTTCAGAAGAAGACAAACC+TGG | - | tig0019619:36464-36483 | Msa1375060:intron | 45.0% | |
| ! | ACTCTAAAGAGACTCTGACC+AGG | + | tig0019619:36485-36504 | None:intergenic | 45.0% |
| ! | ACATCATGCTCTGAACGCAA+AGG | + | tig0019619:36671-36690 | None:intergenic | 45.0% |
| GCCCCACTAAGAGATTTCAT+GGG | - | tig0019619:37202-37221 | Msa1375060:intron | 45.0% | |
| CCCCATGAAATCTCTTAGTG+GGG | + | tig0019619:37206-37225 | None:intergenic | 45.0% | |
| CCCCACTAAGAGATTTCATG+GGG | - | tig0019619:37203-37222 | Msa1375060:intron | 45.0% | |
| AGTCTATAGTAGGAGAGTGG+TGG | + | tig0019619:37257-37276 | None:intergenic | 45.0% | |
| TGAGGGCTACAGTCTATAGT+AGG | + | tig0019619:37267-37286 | None:intergenic | 45.0% | |
| ! | TCCTAAAGGAGCATGGTTGA+GGG | + | tig0019619:37284-37303 | None:intergenic | 45.0% |
| ! | ATCCTAAAGGAGCATGGTTG+AGG | + | tig0019619:37285-37304 | None:intergenic | 45.0% |
| GCACATTCATTTCCCAAGCA+TGG | - | tig0019619:37412-37431 | Msa1375060:intron | 45.0% | |
| ! | TTGGTTCTTGGTCCATGCTT+GGG | + | tig0019619:37427-37446 | None:intergenic | 45.0% |
| ATGGACCATCCTCATGGTAA+AGG | + | tig0019619:37694-37713 | None:intergenic | 45.0% | |
| !!! | CTAGGTTTTTGGGTGTCTCT+GGG | + | tig0019619:38009-38028 | None:intergenic | 45.0% |
| !!! | TCTAGGTTTTTGGGTGTCTC+TGG | + | tig0019619:38010-38029 | None:intergenic | 45.0% |
| GCTAGGGTTTGAGAAGAGAA+AGG | + | tig0019619:38311-38330 | None:intergenic | 45.0% | |
| CAAGAAGAAGAAAGGGGTGA+CGG | + | tig0019619:38333-38352 | None:intergenic | 45.0% | |
| AAAACACACCGCACAAAGAC+GGG | + | tig0019619:38385-38404 | None:intergenic | 45.0% | |
| CTCCGGAATACTCATATCTC+CGG | + | tig0019619:38518-38537 | None:intergenic | 45.0% | |
| TGTTTGGAAGTTGGGATGAG+AGG | - | tig0019619:38789-38808 | Msa1375060:intron | 45.0% | |
| AGATAGATGACCGAAGCAAG+TGG | - | tig0019619:38833-38852 | Msa1375060:intron | 45.0% | |
| GATAGATGACCGAAGCAAGT+GGG | - | tig0019619:38834-38853 | Msa1375060:intron | 45.0% | |
| TGTGATGAGTGGGACTTTGT+TGG | + | tig0019619:38911-38930 | None:intergenic | 45.0% | |
| CTACACAGACGAAGTAAGCA+TGG | + | tig0019619:39565-39584 | None:intergenic | 45.0% | |
| TGGATACCAGAAATCCTCTG+GGG | + | tig0019619:39831-39850 | None:intergenic | 45.0% | |
| CATGGATACCAGAAATCCTC+TGG | + | tig0019619:39833-39852 | None:intergenic | 45.0% | |
| !! | AGATTTGCTGCCGAAGCATT+CGG | - | tig0019619:39902-39921 | Msa1375060:intron | 45.0% |
| CGCTCTCGAATCCATAATCA+AGG | - | tig0019619:39998-40017 | Msa1375060:intron | 45.0% | |
| TTTGTAATCTGGTGGGGTCT+AGG | - | tig0019619:40079-40098 | Msa1375060:intron | 45.0% | |
| GACGTGCCCTTCACTTAAAA+TGG | - | tig0019619:40128-40147 | Msa1375060:intron | 45.0% | |
| AGGTTCTGCAAATCCCATGT+TGG | + | tig0019619:40185-40204 | None:intergenic | 45.0% | |
| GGAGGAGAAATACAAGTGTG+AGG | + | tig0019619:40216-40235 | None:intergenic | 45.0% | |
| GGCAAAAAGGCCAAGAAGAA+CGG | + | tig0019619:40473-40492 | None:intergenic | 45.0% | |
| GCCAAAAAAGGTAGGAAGTC+AGG | + | tig0019619:40501-40520 | None:intergenic | 45.0% | |
| TCCGACTACCAAGCCAAAAA+AGG | + | tig0019619:40513-40532 | None:intergenic | 45.0% | |
| AAGACTTGGAAGCTAGGACT+AGG | - | tig0019619:40776-40795 | Msa1375060:intron | 45.0% | |
| AATACCTACCAGGACTAAGC+CGG | + | tig0019619:40882-40901 | None:intergenic | 45.0% | |
| !! | GAAAAGGGTGTTGCTTCAAC+TGG | - | tig0019619:40946-40965 | Msa1375060:CDS | 45.0% |
| ! | TGGCACAATAACTTGGGTTG+GGG | + | tig0019619:41058-41077 | Msa1375070:intron | 45.0% |
| !! | AAAATTTAAAAATTGATTAT+AGG | + | tig0019619:37628-37647 | None:intergenic | 5.0% |
| !! | CAATAATTATTAATTAATAA+AGG | + | tig0019619:39122-39141 | None:intergenic | 5.0% |
| CAAGAGCAACAATGGTGGCA+CGG | + | tig0019619:35024-35043 | None:intergenic | 50.0% | |
| TGGAGCAAGAGCAACAATGG+TGG | + | tig0019619:35029-35048 | None:intergenic | 50.0% | |
| TGGTGGAGCAAGAGCAACAA+TGG | + | tig0019619:35032-35051 | None:intergenic | 50.0% | |
| TAAGTGTGGAGCTGATGGCT+GGG | + | tig0019619:35061-35080 | None:intergenic | 50.0% | |
| ! | CTTGGGGGATATGCCATTTC+TGG | + | tig0019619:35153-35172 | None:intergenic | 50.0% |
| !! | CCATCTTGTGCTTGACTTGG+GGG | + | tig0019619:35168-35187 | None:intergenic | 50.0% |
| ! | GCACTGACAGAGAGATCAAC+AGG | - | tig0019619:35228-35247 | Msa1375060:CDS | 50.0% |
| TCCAGGAACTGCAAAGGGTT+GGG | + | tig0019619:36946-36965 | None:intergenic | 50.0% | |
| TTCCAGGAACTGCAAAGGGT+TGG | + | tig0019619:36947-36966 | None:intergenic | 50.0% | |
| GGCCCCACTAAGAGATTTCA+TGG | - | tig0019619:37201-37220 | Msa1375060:intron | 50.0% | |
| ! | ACTGTGGGCTAATAGGGCAT+GGG | + | tig0019619:37363-37382 | None:intergenic | 50.0% |
| ! | AACTGTGGGCTAATAGGGCA+TGG | + | tig0019619:37364-37383 | None:intergenic | 50.0% |
| ! | CTTGGTTCTTGGTCCATGCT+TGG | + | tig0019619:37428-37447 | None:intergenic | 50.0% |
| ACCATGAGGATGGTCCATGA+TGG | - | tig0019619:37696-37715 | Msa1375060:intron | 50.0% | |
| TCCATCATGGACCATCCTCA+TGG | + | tig0019619:37700-37719 | None:intergenic | 50.0% | |
| ! | GTCCATGATGGAAGTCACCA+AGG | - | tig0019619:37708-37727 | Msa1375060:intron | 50.0% |
| ! | CTCCTTGGTGACTTCCATCA+TGG | + | tig0019619:37713-37732 | None:intergenic | 50.0% |
| !!! | TTTTTGGGTGTCTCTGGGTG+GGG | + | tig0019619:38004-38023 | None:intergenic | 50.0% |
| !!! | GTTTTTGGGTGTCTCTGGGT+GGG | + | tig0019619:38005-38024 | None:intergenic | 50.0% |
| TGTCGTCAACGTTGCAGATC+CGG | - | tig0019619:38496-38515 | Msa1375060:intron | 50.0% | |
| GTCCACTAACCCACTTGCTT+CGG | + | tig0019619:38846-38865 | None:intergenic | 50.0% | |
| !! | AAGTGGGTTAGTGGACGAAG+CGG | - | tig0019619:38850-38869 | Msa1375060:intron | 50.0% |
| GAGAGAGAGAGAGAGAGAAG+AGG | + | tig0019619:38975-38994 | None:intergenic | 50.0% | |
| ! | AAAAAAGGCACAAGCCCCAG+AGG | - | tig0019619:39814-39833 | Msa1375060:intron | 50.0% |
| TTCGGCAGCAAATCTGGACA+GGG | + | tig0019619:39897-39916 | None:intergenic | 50.0% | |
| GAATGCTTCGGCAGCAAATC+TGG | + | tig0019619:39903-39922 | None:intergenic | 50.0% | |
| TGTCACCACACCGAATGCTT+CGG | + | tig0019619:39915-39934 | None:intergenic | 50.0% | |
| ACAAGTGTGAGGAAGAGGCA+AGG | + | tig0019619:40205-40224 | None:intergenic | 50.0% | |
| ACTTGGAAGCTAGGACTAGG+AGG | - | tig0019619:40779-40798 | Msa1375060:intron | 50.0% | |
| ATACCTACCAGGACTAAGCC+GGG | + | tig0019619:40881-40900 | None:intergenic | 50.0% | |
| !! | ACTTGGGTTGGGGATTGCAT+GGG | + | tig0019619:41048-41067 | Msa1375070:intron | 50.0% |
| !! | AACTTGGGTTGGGGATTGCA+TGG | + | tig0019619:41049-41068 | Msa1375070:intron | 50.0% |
| GTAAGTGTGGAGCTGATGGC+TGG | + | tig0019619:35062-35081 | None:intergenic | 55.0% | |
| GGAGGTAAGTGTGGAGCTGA+TGG | + | tig0019619:35066-35085 | None:intergenic | 55.0% | |
| ! | GGGGGATATGCCATTTCTGG+TGG | + | tig0019619:35150-35169 | None:intergenic | 55.0% |
| CCCCCAAGTCAAGCACAAGA+TGG | - | tig0019619:35165-35184 | Msa1375060:CDS | 55.0% | |
| CTCTCTGTCAGTGCCAGAAC+CGG | + | tig0019619:35222-35241 | None:intergenic | 55.0% | |
| ! | CAAGAGTGTGGGGAGCTGAT+TGG | + | tig0019619:35609-35628 | None:intergenic | 55.0% |
| GCCCTCAACCATGCTCCTTT+AGG | - | tig0019619:37280-37299 | Msa1375060:intron | 55.0% | |
| ! | CTGTGGGCTAATAGGGCATG+GGG | + | tig0019619:37362-37381 | None:intergenic | 55.0% |
| TCTCTGGGTGGGGTGTGTTT+GGG | + | tig0019619:37994-38013 | None:intergenic | 55.0% | |
| !!! | GGTTTTTGGGTGTCTCTGGG+TGG | + | tig0019619:38006-38025 | None:intergenic | 55.0% |
| ! | GAAGAAAGGGGTGACGGCTA+GGG | + | tig0019619:38327-38346 | None:intergenic | 55.0% |
| ! | AGAAGAAAGGGGTGACGGCT+AGG | + | tig0019619:38328-38347 | None:intergenic | 55.0% |
| !! | GACCGAAGCAAGTGGGTTAG+TGG | - | tig0019619:38841-38860 | Msa1375060:intron | 55.0% |
| AGTGGACGAAGCGGAAGGTT+CGG | - | tig0019619:38859-38878 | Msa1375060:intron | 55.0% | |
| GAAGGTTCGGAGGATACAGC+TGG | - | tig0019619:38872-38891 | Msa1375060:intron | 55.0% | |
| ! | CTGCTGCTGCTGTTGCTTGA+TGG | - | tig0019619:39064-39083 | Msa1375060:intron | 55.0% |
| CACAAGCCCCAGAGGATTTC+TGG | - | tig0019619:39822-39841 | Msa1375060:intron | 55.0% | |
| ACGCATGCTCTCTGACAGCA+TGG | + | tig0019619:39851-39870 | None:intergenic | 55.0% | |
| ! | ATGCTGTCAGAGAGCATGCG+TGG | - | tig0019619:39850-39869 | Msa1375060:intron | 55.0% |
| TCGGCAGCAAATCTGGACAG+GGG | + | tig0019619:39896-39915 | None:intergenic | 55.0% | |
| CTTCGGCAGCAAATCTGGAC+AGG | + | tig0019619:39898-39917 | None:intergenic | 55.0% | |
| CCAGTCTCCAACCTCTGCAA+GGG | + | tig0019619:40244-40263 | None:intergenic | 55.0% | |
| TCCAGTCTCCAACCTCTGCA+AGG | + | tig0019619:40245-40264 | None:intergenic | 55.0% | |
| GAAAATGCCCGGCTTAGTCC+TGG | - | tig0019619:40871-40890 | Msa1375060:CDS | 55.0% | |
| CACTACGGCTGGGAGAGAAA+AGG | + | tig0019619:40990-41009 | Msa1375070:intron | 55.0% | |
| !! | ATCCGGGTGGTGTTGCACTA+CGG | + | tig0019619:41005-41024 | Msa1375070:intron | 55.0% |
| ACCTGGAAGTGACGGTGATC+CGG | + | tig0019619:41022-41041 | Msa1375070:intron | 55.0% | |
| GATCACCGTCACTTCCAGGT+TGG | - | tig0019619:41022-41041 | Msa1375060:CDS | 55.0% | |
| ATGGGCCAACCTGGAAGTGA+CGG | + | tig0019619:41030-41049 | Msa1375070:intron | 55.0% | |
| CAATGGTGGCACGGTGGATG+TGG | + | tig0019619:35015-35034 | None:intergenic | 60.0% | |
| GAGCAACAATGGTGGCACGG+TGG | + | tig0019619:35021-35040 | None:intergenic | 60.0% | |
| ! | TGATGGCTGGGTGGTACTGG+TGG | + | tig0019619:35049-35068 | None:intergenic | 60.0% |
| AGCTGATGGCTGGGTGGTAC+TGG | + | tig0019619:35052-35071 | None:intergenic | 60.0% | |
| GCCCAACCCTTTGCAGTTCC+TGG | - | tig0019619:36942-36961 | Msa1375060:intron | 60.0% | |
| GGGCTAATAGGGCATGGGGA+AGG | + | tig0019619:37358-37377 | None:intergenic | 60.0% | |
| GTCTCTGGGTGGGGTGTGTT+TGG | + | tig0019619:37995-38014 | None:intergenic | 60.0% | |
| ! | GGGTTAGTGGACGAAGCGGA+AGG | - | tig0019619:38854-38873 | Msa1375060:intron | 60.0% |
| CGGAGGATACAGCTGGAGAC+AGG | - | tig0019619:38879-38898 | Msa1375060:intron | 60.0% | |
| CAGCAGTAGCGCGAGGAGAA+AGG | + | tig0019619:39050-39069 | None:intergenic | 60.0% | |
| ! | TGCTGCCGAAGCATTCGGTG+TGG | - | tig0019619:39907-39926 | Msa1375060:intron | 60.0% |
| ! | CCAACCTCTGCAAGGGTGCA+CGG | + | tig0019619:40237-40256 | None:intergenic | 60.0% |
| CCCTTGCAGAGGTTGGAGAC+TGG | - | tig0019619:40241-40260 | Msa1375060:intron | 60.0% | |
| ATGCCCGGCTTAGTCCTGGT+AGG | - | tig0019619:40875-40894 | Msa1375060:CDS | 60.0% | |
| !! | GGTGGTGTTGCACTACGGCT+GGG | + | tig0019619:41000-41019 | Msa1375070:intron | 60.0% |
| AGCCGTAGTGCAACACCACC+CGG | - | tig0019619:41000-41019 | Msa1375060:CDS | 60.0% | |
| CCTGGAAGTGACGGTGATCC+GGG | + | tig0019619:41021-41040 | Msa1375070:intron | 60.0% | |
| TGGTGGCACGGTGGATGTGG+AGG | + | tig0019619:35012-35031 | None:intergenic | 65.0% | |
| GTGTGGAGCTGATGGCTGGG+TGG | + | tig0019619:35058-35077 | None:intergenic | 65.0% | |
| GGACGAAGCGGAAGGTTCGG+AGG | - | tig0019619:38862-38881 | Msa1375060:intron | 65.0% | |
| ACAGCAGCAGCAGTAGCGCG+AGG | + | tig0019619:39057-39076 | None:intergenic | 65.0% | |
| TCCTCCGTGCACCCTTGCAG+AGG | - | tig0019619:40230-40249 | Msa1375060:intron | 65.0% | |
| ! | ACCTCTGCAAGGGTGCACGG+AGG | + | tig0019619:40234-40253 | None:intergenic | 65.0% |
| CCGTGCACCCTTGCAGAGGT+TGG | - | tig0019619:40234-40253 | Msa1375060:intron | 65.0% | |
| !! | GGGTGGTGTTGCACTACGGC+TGG | + | tig0019619:41001-41020 | Msa1375070:intron | 65.0% |
| GGAAGTGACGGTGATCCGGG+TGG | + | tig0019619:41018-41037 | Msa1375070:intron | 65.0% | |
| CCCGGATCACCGTCACTTCC+AGG | - | tig0019619:41018-41037 | Msa1375060:CDS | 65.0% | |
| GGGGATTGCATGGGCCAACC+TGG | + | tig0019619:41039-41058 | Msa1375070:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019619 | gene | 34952 | 41080 | 34952 | ID=Msa1375060;Name=Msa1375060 |
| tig0019619 | mRNA | 34952 | 41080 | 34952 | ID=Msa1375060-mRNA-1;Parent=Msa1375060;Name=Msa1375060-mRNA-1;_AED=0.19;_eAED=0.20;_QI=0|0|0|1|1|1|3|0|498 |
| tig0019619 | exon | 40783 | 41080 | 40783 | ID=Msa1375060-mRNA-1:exon:4304;Parent=Msa1375060-mRNA-1 |
| tig0019619 | exon | 36013 | 36231 | 36013 | ID=Msa1375060-mRNA-1:exon:4303;Parent=Msa1375060-mRNA-1 |
| tig0019619 | exon | 34952 | 35931 | 34952 | ID=Msa1375060-mRNA-1:exon:4302;Parent=Msa1375060-mRNA-1 |
| tig0019619 | CDS | 40783 | 41080 | 40783 | ID=Msa1375060-mRNA-1:cds;Parent=Msa1375060-mRNA-1 |
| tig0019619 | CDS | 36013 | 36231 | 36013 | ID=Msa1375060-mRNA-1:cds;Parent=Msa1375060-mRNA-1 |
| tig0019619 | CDS | 34952 | 35931 | 34952 | ID=Msa1375060-mRNA-1:cds;Parent=Msa1375060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
