Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1392330 | AES63128.1 | 98.133 | 375 | 1 | 1 | 130 | 498 | 1 | 375 | 0.0 | 738 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1392330 | G7IL59 | 98.133 | 375 | 1 | 1 | 130 | 498 | 1 | 375 | 0.0 | 738 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1351640 | Msa1392330 | 0.986964 | 1.403475e-168 | -8.615850e-47 |
| Msa1375060 | Msa1392330 | 0.999088 | 1.317828e-289 | -8.615850e-47 |
| Msa1392330 | Msa1452090 | 0.816070 | 6.682954e-52 | -8.615850e-47 |
| Msa1392330 | Msa1460820 | 0.999423 | 1.760685e-310 | -8.615850e-47 |
| Msa0131050 | Msa1392330 | 0.845325 | 4.357972e-59 | -8.615850e-47 |
| Msa0138390 | Msa1392330 | 0.837132 | 6.224802e-57 | -8.615850e-47 |
| Msa0146990 | Msa1392330 | 0.808250 | 3.396241e-50 | -8.615850e-47 |
| Msa0376450 | Msa1392330 | 0.816849 | 4.474237e-52 | -8.615850e-47 |
| Msa0465800 | Msa1392330 | -0.813559 | 2.407702e-51 | -8.615850e-47 |
| Msa0471720 | Msa1392330 | 0.818444 | 1.953763e-52 | -8.615850e-47 |
| Msa0472740 | Msa1392330 | -0.815046 | 1.129652e-51 | -8.615850e-47 |
| Msa1009440 | Msa1392330 | 0.815720 | 7.999875e-52 | -8.615850e-47 |
| Msa1050780 | Msa1392330 | 0.805677 | 1.189251e-49 | -8.615850e-47 |
| Msa1098180 | Msa1392330 | 0.887896 | 9.537118e-73 | -8.615850e-47 |
| Msa0240450 | Msa1392330 | 0.833390 | 5.481331e-56 | -8.615850e-47 |
| Msa0270030 | Msa1392330 | 0.987038 | 7.749826e-169 | -8.615850e-47 |
| Msa1119250 | Msa1392330 | 0.849892 | 2.415701e-60 | -8.615850e-47 |
| Msa1119300 | Msa1392330 | 0.853428 | 2.405146e-61 | -8.615850e-47 |
| Msa1138240 | Msa1392330 | 0.873052 | 1.982254e-67 | -8.615850e-47 |
| Msa0516510 | Msa1392330 | 0.815434 | 9.262841e-52 | -8.615850e-47 |
| Msa0967650 | Msa1392330 | 0.818939 | 1.508461e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1392330 | MtrunA17_Chr2g0276811 | 85.067 | 375 | 2 | 2 | 130 | 498 | 1 | 327 | 0.0 | 594 |
| Msa1392330 | MtrunA17_Chr4g0042531 | 63.784 | 370 | 90 | 3 | 105 | 441 | 4 | 362 | 1.05e-157 | 452 |
| Msa1392330 | MtrunA17_Chr4g0042541 | 65.217 | 368 | 83 | 4 | 105 | 438 | 4 | 360 | 1.74e-157 | 452 |
| Msa1392330 | MtrunA17_Chr2g0276801 | 89.000 | 100 | 9 | 2 | 1 | 99 | 13 | 111 | 1.46e-51 | 171 |
| Msa1392330 | MtrunA17_Chr3g0127551 | 29.431 | 299 | 164 | 7 | 132 | 396 | 7 | 292 | 1.89e-19 | 89.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1392330 | AT1G57680.3 | 49.429 | 350 | 139 | 4 | 130 | 442 | 1 | 349 | 3.11e-96 | 295 |
| Msa1392330 | AT1G57680.1 | 49.429 | 350 | 139 | 4 | 130 | 442 | 1 | 349 | 3.11e-96 | 295 |
| Msa1392330 | AT1G57680.2 | 49.429 | 350 | 139 | 4 | 130 | 442 | 1 | 349 | 3.11e-96 | 295 |
Find 127 sgRNAs with CRISPR-Local
Find 431 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCACTTGTATGTTGTTC+TGG | 0.136495 | tig0021492:-96199 | Msa1392330:CDS |
| CCATTATTAGTTATTGATAT+TGG | 0.198785 | tig0021492:-97099 | Msa1392330:intron |
| CACAAGCCCCAGAGGATTTC+TGG | 0.199571 | tig0021492:-97068 | Msa1392330:CDS |
| GTTGAATAAAACCTTGATTA+TGG | 0.209985 | tig0021492:+96881 | None:intergenic |
| CAAGACAACAACTACGACTA+TGG | 0.236213 | tig0021492:-101781 | Msa1392330:CDS |
| TTACTTAGTACCGTTCTTCT+TGG | 0.246463 | tig0021492:-96430 | Msa1392330:CDS |
| TTTGTGTTTCCTTCCATTAA+GGG | 0.263956 | tig0021492:-96296 | Msa1392330:CDS |
| TGTTTATGGCATTCCGGTTC+TGG | 0.270261 | tig0021492:-101686 | Msa1392330:CDS |
| TCTGTTTCAGAACCTGTTTA+TGG | 0.277422 | tig0021492:-101700 | Msa1392330:CDS |
| GACGTGCCCTTCACTTAAAA+TGG | 0.278233 | tig0021492:-96762 | Msa1392330:CDS |
| ACTTCTTCAAGCCATGAAAA+TGG | 0.296134 | tig0021492:+101808 | None:intergenic |
| AGCTGATGGCTGGGTGGTAC+TGG | 0.305412 | tig0021492:+101843 | Msa1392340:intron |
| ACCTCAGTTAGACAAGAATA+AGG | 0.305847 | tig0021492:-96530 | Msa1392330:CDS |
| GGGGTCTAGGTGAAATTATT+AGG | 0.311728 | tig0021492:-96798 | Msa1392330:intron |
| CTGGAATTATGAGCAGAAAA+TGG | 0.319368 | tig0021492:-96630 | Msa1392330:CDS |
| GAATGCTTCGGCAGCAAATC+TGG | 0.324517 | tig0021492:+96990 | None:intergenic |
| TTGCACTTGTATGTTGTTCT+GGG | 0.341889 | tig0021492:-96198 | Msa1392330:CDS |
| CATGCGTGGAATCTGTATTT+CGG | 0.345778 | tig0021492:-97026 | Msa1392330:CDS |
| CCCGGATCACCGTCACTTCC+AGG | 0.354198 | tig0021492:-95872 | Msa1392330:CDS |
| GTAAGTGTGGAGCTGATGGC+TGG | 0.370131 | tig0021492:+101833 | Msa1392340:intron |
| TCAACAAAGGTTTACAGAAA+AGG | 0.373868 | tig0021492:-96342 | Msa1392330:CDS |
| ATGCGTGGAATCTGTATTTC+GGG | 0.375518 | tig0021492:-97025 | Msa1392330:CDS |
| CAACAAAGGTTTACAGAAAA+GGG | 0.378116 | tig0021492:-96341 | Msa1392330:CDS |
| CAAACCAAGAAGAATCAAAA+TGG | 0.383211 | tig0021492:+96942 | None:intergenic |
| CTCTCTGTCAGTGCCAGAAC+CGG | 0.384564 | tig0021492:+101673 | None:intergenic |
| GGGTGGTGTTGCACTACGGC+TGG | 0.385070 | tig0021492:+95892 | None:intergenic |
| ACCTGGAAGTGACGGTGATC+CGG | 0.386511 | tig0021492:+95871 | None:intergenic |
| TATCACTAGCCAGAGTCATT+TGG | 0.389755 | tig0021492:-96056 | Msa1392330:CDS |
| AGTTGCAGATTGTTTAGCTC+TGG | 0.392033 | tig0021492:-96146 | Msa1392330:CDS |
| AAGTCAGGATAATGGCAAAA+AGG | 0.395416 | tig0021492:+96407 | None:intergenic |
| GAAAAGGGTGTTGCTTCAAC+TGG | 0.400149 | tig0021492:-95944 | Msa1392330:CDS |
| CCTGGAAGTGACGGTGATCC+GGG | 0.407160 | tig0021492:+95872 | None:intergenic |
| ATTCATGTTGCCACCAGAAA+TGG | 0.409650 | tig0021492:-101755 | Msa1392330:CDS |
| ATGGCACAATAACTTGGGTT+GGG | 0.415265 | tig0021492:+95834 | None:intergenic |
| CAATGGTGGCACGGTGGATG+TGG | 0.426793 | tig0021492:+101880 | Msa1392340:intron |
| CACCATCTTGTGCTTGACTT+GGG | 0.429863 | tig0021492:+101725 | None:intergenic |
| AGATTTGCTGCCGAAGCATT+CGG | 0.431030 | tig0021492:-96988 | Msa1392330:CDS |
| AACTTGGGTTGGGGATTGCA+TGG | 0.433060 | tig0021492:+95844 | None:intergenic |
| AATGACTCTGGCTAGTGATA+AGG | 0.433949 | tig0021492:+96059 | None:intergenic |
| ACACCATCTTGTGCTTGACT+TGG | 0.438856 | tig0021492:+101724 | None:intergenic |
| ATGACTCTGGCTAGTGATAA+GGG | 0.438994 | tig0021492:+96060 | None:intergenic |
| CCGTGCACCCTTGCAGAGGT+TGG | 0.447505 | tig0021492:-96656 | Msa1392330:CDS |
| CGCTCTCGAATCCATAATCA+AGG | 0.454403 | tig0021492:-96892 | Msa1392330:intron |
| GCTGCTATGGCACAATAACT+TGG | 0.457884 | tig0021492:+95828 | None:intergenic |
| CCCTTGCAGAGGTTGGAGAC+TGG | 0.459243 | tig0021492:-96649 | Msa1392330:CDS |
| GAAATACAAGTGTGAGGAAG+AGG | 0.466208 | tig0021492:+96683 | None:intergenic |
| AGAACCTGTTTATGGCATTC+CGG | 0.468495 | tig0021492:-101692 | Msa1392330:CDS |
| CATGGATACCAGAAATCCTC+TGG | 0.469355 | tig0021492:+97060 | None:intergenic |
| GAAGAACGGTACTAAGTAAA+GGG | 0.471576 | tig0021492:+96434 | None:intergenic |
| CTTCGGCAGCAAATCTGGAC+AGG | 0.473877 | tig0021492:+96995 | None:intergenic |
| AGAGCTAAACAATCTGCAAC+TGG | 0.476529 | tig0021492:+96148 | None:intergenic |
| AGAACCGGAATGCCATAAAC+AGG | 0.478656 | tig0021492:+101688 | None:intergenic |
| GCACTGACAGAGAGATCAAC+AGG | 0.479490 | tig0021492:-101664 | Msa1392330:intron |
| ACCATCTTGTGCTTGACTTG+GGG | 0.487601 | tig0021492:+101726 | None:intergenic |
| GTTGCAGATTGTTTAGCTCT+GGG | 0.488179 | tig0021492:-96145 | Msa1392330:CDS |
| AGAAGAACGGTACTAAGTAA+AGG | 0.495985 | tig0021492:+96433 | None:intergenic |
| GGGGATTGCATGGGCCAACC+TGG | 0.496851 | tig0021492:+95854 | None:intergenic |
| TATGGCACAATAACTTGGGT+TGG | 0.509350 | tig0021492:+95833 | None:intergenic |
| AAGGTAGGAAGTCAGGATAA+TGG | 0.511696 | tig0021492:+96399 | None:intergenic |
| TGTCACCACACCGAATGCTT+CGG | 0.512183 | tig0021492:+96978 | None:intergenic |
| TGGCACAATAACTTGGGTTG+GGG | 0.518698 | tig0021492:+95835 | None:intergenic |
| CCTCAGTTAGACAAGAATAA+GGG | 0.519352 | tig0021492:-96529 | Msa1392330:CDS |
| TAAGTGTGGAGCTGATGGCT+GGG | 0.529852 | tig0021492:+101834 | Msa1392340:intron |
| GAAAATGCCCGGCTTAGTCC+TGG | 0.529972 | tig0021492:-96019 | Msa1392330:CDS |
| CATTATCTTCCAAATGACTC+TGG | 0.530554 | tig0021492:+96047 | None:intergenic |
| CCAACCTCTGCAAGGGTGCA+CGG | 0.530849 | tig0021492:+96656 | None:intergenic |
| GCTTCAAACATAAAATGCTC+AGG | 0.535570 | tig0021492:+96241 | None:intergenic |
| AAAAGCTGAAGAAGAAACAT+TGG | 0.535607 | tig0021492:+96568 | None:intergenic |
| GGTGGTGTTGCACTACGGCT+GGG | 0.535611 | tig0021492:+95893 | None:intergenic |
| TGATGGCTGGGTGGTACTGG+TGG | 0.539099 | tig0021492:+101846 | Msa1392340:intron |
| TCCTCCGTGCACCCTTGCAG+AGG | 0.540397 | tig0021492:-96660 | Msa1392330:CDS |
| ACTTGGGTTGGGGATTGCAT+GGG | 0.547759 | tig0021492:+95845 | None:intergenic |
| AATACCTACCAGGACTAAGC+CGG | 0.548682 | tig0021492:+96011 | None:intergenic |
| TCCAGTCTCCAACCTCTGCA+AGG | 0.553487 | tig0021492:+96648 | None:intergenic |
| CACTACGGCTGGGAGAGAAA+AGG | 0.561488 | tig0021492:+95903 | None:intergenic |
| ATCTACAAGACTTGGAAGCT+AGG | 0.563095 | tig0021492:-96120 | Msa1392330:CDS |
| ATCCGGGTGGTGTTGCACTA+CGG | 0.565464 | tig0021492:+95888 | None:intergenic |
| CCATCTTGTGCTTGACTTGG+GGG | 0.568482 | tig0021492:+101727 | None:intergenic |
| AGCCGTAGTGCAACACCACC+CGG | 0.570029 | tig0021492:-95890 | Msa1392330:CDS |
| TGCCCTTCACTTAAAATGGA+AGG | 0.570691 | tig0021492:-96758 | Msa1392330:CDS |
| TAAGTAAAGGGTAAGTACAC+AGG | 0.570980 | tig0021492:+96446 | None:intergenic |
| ATGTTATATTGTATCCAACA+TGG | 0.571201 | tig0021492:-96722 | Msa1392330:CDS |
| AAGACAACAACTACGACTAT+GGG | 0.571778 | tig0021492:-101780 | Msa1392330:CDS |
| TCTGGGAAATCTACAAGACT+TGG | 0.572100 | tig0021492:-96128 | Msa1392330:CDS |
| ATGGATACCAGAAATCCTCT+GGG | 0.580053 | tig0021492:+97061 | None:intergenic |
| TTCGGCAGCAAATCTGGACA+GGG | 0.581106 | tig0021492:+96996 | None:intergenic |
| GATTCATCTGAATACCTACC+AGG | 0.582625 | tig0021492:+96001 | None:intergenic |
| TTGAAATTAGTCATCAACAA+AGG | 0.583602 | tig0021492:-96355 | Msa1392330:CDS |
| TGTTATATTGTATCCAACAT+GGG | 0.587232 | tig0021492:-96721 | Msa1392330:CDS |
| ATACCTACCAGGACTAAGCC+GGG | 0.594514 | tig0021492:+96012 | None:intergenic |
| GATCACCGTCACTTCCAGGT+TGG | 0.595185 | tig0021492:-95868 | Msa1392330:CDS |
| TCAGATGAATCAACAAAGCG+TGG | 0.595190 | tig0021492:-95989 | Msa1392330:CDS |
| ACGCATGCTCTCTGACAGCA+TGG | 0.601326 | tig0021492:+97042 | None:intergenic |
| CCAGTCTCCAACCTCTGCAA+GGG | 0.602446 | tig0021492:+96649 | None:intergenic |
| GGAGGTAAGTGTGGAGCTGA+TGG | 0.602790 | tig0021492:+101829 | Msa1392340:intron |
| CTGCTATGGCACAATAACTT+GGG | 0.603852 | tig0021492:+95829 | None:intergenic |
| TGGTGGAGCAAGAGCAACAA+TGG | 0.604648 | tig0021492:+101863 | Msa1392340:intron |
| ACTTGGAAGCTAGGACTAGG+AGG | 0.606767 | tig0021492:-96111 | Msa1392330:CDS |
| ATGCTGTCAGAGAGCATGCG+TGG | 0.609403 | tig0021492:-97040 | Msa1392330:CDS |
| CTTGATTATGGATTCGAGAG+CGG | 0.616039 | tig0021492:+96893 | None:intergenic |
| TGGTGGCACGGTGGATGTGG+AGG | 0.618087 | tig0021492:+101883 | Msa1392340:intron |
| CCCTTATTCTTGTCTAACTG+AGG | 0.619051 | tig0021492:+96529 | None:intergenic |
| GCTGAAGAAGAAACATTGGA+AGG | 0.623753 | tig0021492:+96572 | None:intergenic |
| AAGTAAAGGGTAAGTACACA+GGG | 0.626323 | tig0021492:+96447 | None:intergenic |
| CAAGAGCAACAATGGTGGCA+CGG | 0.627648 | tig0021492:+101871 | Msa1392340:intron |
| ATAATGTTGAGGAAAATGCC+CGG | 0.641939 | tig0021492:-96030 | Msa1392330:CDS |
| AAGACTTGGAAGCTAGGACT+AGG | 0.643546 | tig0021492:-96114 | Msa1392330:CDS |
| TCTTCAAGCCATGAAAATGG+AGG | 0.647955 | tig0021492:+101811 | None:intergenic |
| AGGTTCTGCAAATCCCATGT+TGG | 0.653113 | tig0021492:+96708 | None:intergenic |
| CATGAAAATGGAGGTAAGTG+TGG | 0.654055 | tig0021492:+101820 | None:intergenic |
| CTAAACAATCTGCAACTGGA+CGG | 0.656325 | tig0021492:+96152 | None:intergenic |
| TCATTTGGAAGATAATGTTG+AGG | 0.658087 | tig0021492:-96041 | Msa1392330:CDS |
| GTGTGGAGCTGATGGCTGGG+TGG | 0.664412 | tig0021492:+101837 | Msa1392340:intron |
| CAGATGAATCAACAAAGCGT+GGG | 0.669113 | tig0021492:-95988 | Msa1392330:CDS |
| TCGGCAGCAAATCTGGACAG+GGG | 0.670257 | tig0021492:+96997 | None:intergenic |
| ATGGGCCAACCTGGAAGTGA+CGG | 0.673283 | tig0021492:+95863 | None:intergenic |
| AAGAAAAGCCAAGAAAACAA+AGG | 0.675305 | tig0021492:+96219 | None:intergenic |
| ACAAGTGTGAGGAAGAGGCA+AGG | 0.681559 | tig0021492:+96688 | None:intergenic |
| TGGAGCAAGAGCAACAATGG+TGG | 0.690481 | tig0021492:+101866 | Msa1392340:intron |
| GCTGTGCTTGTAAAATAATG+CGG | 0.697719 | tig0021492:+96490 | None:intergenic |
| GGAGGAGAAATACAAGTGTG+AGG | 0.697754 | tig0021492:+96677 | None:intergenic |
| TGCTGCCGAAGCATTCGGTG+TGG | 0.699184 | tig0021492:-96983 | Msa1392330:CDS |
| GAGCAACAATGGTGGCACGG+TGG | 0.703864 | tig0021492:+101874 | Msa1392340:intron |
| ACCTCTGCAAGGGTGCACGG+AGG | 0.720964 | tig0021492:+96659 | None:intergenic |
| ATGCCCGGCTTAGTCCTGGT+AGG | 0.725216 | tig0021492:-96015 | Msa1392330:CDS |
| GGAAGTGACGGTGATCCGGG+TGG | 0.749090 | tig0021492:+95875 | None:intergenic |
| TGGATACCAGAAATCCTCTG+GGG | 0.759997 | tig0021492:+97062 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTAGATACATATTT+GGG | + | tig0021492:96573-96592 | None:intergenic | 10.0% |
| !!! | AATTTTTTTAGATACATATT+TGG | + | tig0021492:96574-96593 | None:intergenic | 10.0% |
| !!! | ATCAATTTTTAAATTTTGAA+AGG | - | tig0021492:98511-98530 | Msa1392330:intron | 10.0% |
| !!! | TCAATTTTTAAATTTTGAAA+GGG | - | tig0021492:98512-98531 | Msa1392330:intron | 10.0% |
| !!! | TTCAAATTTCTAGTAAATAA+CGG | + | tig0021492:96262-96281 | None:intergenic | 15.0% |
| !!! | TAAAATTGTTGATTACAAAA+AGG | - | tig0021492:97099-97118 | Msa1392330:intron | 15.0% |
| !!! | TCATAATTTTTTTTCTTTTG+AGG | - | tig0021492:97944-97963 | Msa1392330:intron | 15.0% |
| !! | ATTTAAAAATTGATTATAGG+TGG | + | tig0021492:98505-98524 | None:intergenic | 15.0% |
| !!! | TCACAAAAATTTTCTAAAAT+TGG | - | tig0021492:98817-98836 | Msa1392330:intron | 15.0% |
| !! | AAATAAAATATACAGAGAAA+AGG | - | tig0021492:99068-99087 | Msa1392330:intron | 15.0% |
| !! | AATAAAATATACAGAGAAAA+GGG | - | tig0021492:99069-99088 | Msa1392330:intron | 15.0% |
| !! | ATTCATTCATTTAAATTGAT+AGG | + | tig0021492:99562-99581 | None:intergenic | 15.0% |
| !! | GAATTCCAAATAATTATATA+GGG | + | tig0021492:100213-100232 | None:intergenic | 15.0% |
| !! | TGAATTCCAAATAATTATAT+AGG | + | tig0021492:100214-100233 | None:intergenic | 15.0% |
| !!! | TCAAATTTCTAGTAAATAAC+GGG | + | tig0021492:96261-96280 | None:intergenic | 20.0% |
| !! | ATGAAGAAAAGAACAATATT+TGG | + | tig0021492:96320-96339 | None:intergenic | 20.0% |
| !! | TAAGAACTTAAGTGAAAAAA+AGG | + | tig0021492:96512-96531 | None:intergenic | 20.0% |
| !! | TGATTACAAAAAGGTTAATA+TGG | - | tig0021492:97108-97127 | Msa1392330:intron | 20.0% |
| !! | GAAGTCAGAATTTAATAATA+TGG | - | tig0021492:97594-97613 | Msa1392330:intron | 20.0% |
| !! | TTTCAATGCTTATATTATTG+AGG | - | tig0021492:98476-98495 | Msa1392330:intron | 20.0% |
| !! | AGAAGAATAAAAACAAACAT+AGG | - | tig0021492:98634-98653 | Msa1392330:intron | 20.0% |
| !! | GAAGAATAAAAACAAACATA+GGG | - | tig0021492:98635-98654 | Msa1392330:intron | 20.0% |
| !! | TTTCAAAATTTGTCAAAATG+TGG | + | tig0021492:98701-98720 | None:intergenic | 20.0% |
| !!! | TTGTTTTTGTCCAATAAAAA+TGG | - | tig0021492:98780-98799 | Msa1392330:intron | 20.0% |
| !! | ATATTAGAATCGTTAAGTTA+CGG | - | tig0021492:99619-99638 | Msa1392330:intron | 20.0% |
| !! | TAATTATATAGGGTTAAGAA+GGG | + | tig0021492:100203-100222 | None:intergenic | 20.0% |
| !! | ATAATTATATAGGGTTAAGA+AGG | + | tig0021492:100204-100223 | None:intergenic | 20.0% |
| !! | CTTAACCCTATATAATTATT+TGG | - | tig0021492:100205-100224 | Msa1392330:intron | 20.0% |
| !!! | TTGTTTTTAGATGTTTGAAT+TGG | - | tig0021492:100516-100535 | Msa1392330:intron | 20.0% |
| !!! | TGTTTTTAGATGTTTGAATT+GGG | - | tig0021492:100517-100536 | Msa1392330:intron | 20.0% |
| !! | CCAATATCAATAACTAATAA+TGG | + | tig0021492:100676-100695 | None:intergenic | 20.0% |
| !! | CCATTATTAGTTATTGATAT+TGG | - | tig0021492:100673-100692 | Msa1392330:intron | 20.0% |
| !! | AGTTATTGATATTGGAAAAA+AGG | - | tig0021492:100681-100700 | Msa1392330:intron | 20.0% |
| !!! | ATTCAACTCAATTATTTTAG+TGG | - | tig0021492:100907-100926 | Msa1392330:intron | 20.0% |
| !!! | TTTGGATGTGTTTTTAGTTT+TGG | - | tig0021492:96135-96154 | Msa1392330:CDS | 25.0% |
| !!! | GACATAATTTGTCCATTTTA+AGG | - | tig0021492:97000-97019 | Msa1392330:CDS | 25.0% |
| !!! | ATTTGTCCATTTTAAGGATT+TGG | - | tig0021492:97006-97025 | Msa1392330:CDS | 25.0% |
| ! | TCATTTCCAAATCCTTAAAA+TGG | + | tig0021492:97015-97034 | None:intergenic | 25.0% |
| !!! | ACAATTTTAAGAATCTCTTC+AGG | + | tig0021492:97088-97107 | None:intergenic | 25.0% |
| !! | ATGTCGTTTAATAATACTAG+AGG | - | tig0021492:97203-97222 | Msa1392330:intron | 25.0% |
| ! | AAACAAACAAAGAACTTCAA+TGG | + | tig0021492:97270-97289 | None:intergenic | 25.0% |
| !! | CTTTTTGTTGATCTTTAATC+AGG | - | tig0021492:97470-97489 | Msa1392330:intron | 25.0% |
| !! | TGACTTCAAAGTCATATTTT+TGG | + | tig0021492:97581-97600 | None:intergenic | 25.0% |
| ! | ATAATGCATGAAAGAACAAT+TGG | + | tig0021492:97650-97669 | None:intergenic | 25.0% |
| !!! | TCTTCAGTTTAGTTTTAGAT+AGG | - | tig0021492:97736-97755 | Msa1392330:intron | 25.0% |
| ! | TTTCAACTATAGACTACTAT+TGG | + | tig0021492:97923-97942 | None:intergenic | 25.0% |
| ! | TTACATGAAGAACAAAAGAT+TGG | + | tig0021492:98011-98030 | None:intergenic | 25.0% |
| !!! | GACAATAAAGACTTGTTTTT+CGG | + | tig0021492:98115-98134 | None:intergenic | 25.0% |
| !!! | CACTATTTTCTTTTAACTGT+GGG | + | tig0021492:98258-98277 | None:intergenic | 25.0% |
| ! | ATTCCTAAATTCGTGATTAA+AGG | - | tig0021492:98382-98401 | Msa1392330:intron | 25.0% |
| !!! | ACAAGTTTCCTTTAAAACTT+GGG | + | tig0021492:98457-98476 | None:intergenic | 25.0% |
| !!! | AACAAGTTTCCTTTAAAACT+TGG | + | tig0021492:98458-98477 | None:intergenic | 25.0% |
| !!! | TTAAATTTTGAAAGGGAGTT+TGG | - | tig0021492:98519-98538 | Msa1392330:intron | 25.0% |
| !!! | CACTTTTTCTCCATTTTTAT+TGG | + | tig0021492:98793-98812 | None:intergenic | 25.0% |
| ! | CAATAAAAATGGAGAAAAAG+TGG | - | tig0021492:98791-98810 | Msa1392330:intron | 25.0% |
| !!! | TGTTTGGGTATTTTTTTTGA+TGG | + | tig0021492:98859-98878 | None:intergenic | 25.0% |
| ! | CAAATTCGCTAAAAACAAAA+AGG | + | tig0021492:99517-99536 | None:intergenic | 25.0% |
| !!! | CTTTTTGTTTTTAGCGAATT+TGG | - | tig0021492:99515-99534 | Msa1392330:intron | 25.0% |
| ! | TATTAGAATCGTTAAGTTAC+GGG | - | tig0021492:99620-99639 | Msa1392330:intron | 25.0% |
| ! | GTTGAATGATATGAATTGTT+TGG | - | tig0021492:99653-99672 | Msa1392330:intron | 25.0% |
| ! | ATATGAATTGTTTGGAAGTT+GGG | - | tig0021492:99661-99680 | Msa1392330:intron | 25.0% |
| ! | GTAAATAACACGTTTGATTA+GGG | + | tig0021492:100083-100102 | None:intergenic | 25.0% |
| ! | AGTAAATAACACGTTTGATT+AGG | + | tig0021492:100084-100103 | None:intergenic | 25.0% |
| !! | TGATGATGATGATTATGAAT+CGG | + | tig0021492:100134-100153 | None:intergenic | 25.0% |
| !! | TAATAAAGAGAAAGCATGTA+TGG | + | tig0021492:100266-100285 | None:intergenic | 25.0% |
| ! | ACAAATCTCATTGAACAAAA+TGG | + | tig0021492:100470-100489 | None:intergenic | 25.0% |
| ! | GTTGAATAAAACCTTGATTA+TGG | + | tig0021492:100894-100913 | None:intergenic | 25.0% |
| ! | AATGCAATTCTAATAATCCA+AGG | + | tig0021492:100934-100953 | None:intergenic | 25.0% |
| !! | CATTCATCTTATTTGTAATC+TGG | - | tig0021492:100950-100969 | Msa1392330:intron | 25.0% |
| ! | ATGTTATATTGTATCCAACA+TGG | - | tig0021492:101050-101069 | Msa1392330:intron | 25.0% |
| ! | TGTTATATTGTATCCAACAT+GGG | - | tig0021492:101051-101070 | Msa1392330:intron | 25.0% |
| ! | TTGAAATTAGTCATCAACAA+AGG | - | tig0021492:101417-101436 | Msa1392330:intron | 25.0% |
| ! | ATTTGAAATTGTCAAGAGCT+TGG | - | tig0021492:96275-96294 | Msa1392330:CDS | 30.0% |
| !!! | ATTGTTTTAGCATGTGTGAT+TGG | - | tig0021492:96642-96661 | Msa1392330:CDS | 30.0% |
| ATGTTAGACCTTTAACATGA+AGG | - | tig0021492:96667-96686 | Msa1392330:CDS | 30.0% | |
| ATGAAGGAAACTGAGAAAAT+TGG | - | tig0021492:96683-96702 | Msa1392330:CDS | 30.0% | |
| CAAGATCAAACTTATGGTTA+TGG | - | tig0021492:96709-96728 | Msa1392330:CDS | 30.0% | |
| CATGCAAATTAAATCTCTCA+TGG | + | tig0021492:96883-96902 | None:intergenic | 30.0% | |
| !! | TTAATTTGCATGAGACATAG+TGG | - | tig0021492:96891-96910 | Msa1392330:intron | 30.0% |
| !! | TATGGATTGGAAAGTGTTTA+TGG | - | tig0021492:96919-96938 | Msa1392330:CDS | 30.0% |
| !! | ATGGATTGGAAAGTGTTTAT+GGG | - | tig0021492:96920-96939 | Msa1392330:CDS | 30.0% |
| ! | TTGATAGTAGATGAATGTGA+TGG | + | tig0021492:96965-96984 | None:intergenic | 30.0% |
| ! | GATCATGTCTGATTTTCTAA+TGG | - | tig0021492:97177-97196 | Msa1392330:intron | 30.0% |
| !! | AGAGGAATAATTTGCTTCTT+TGG | - | tig0021492:97221-97240 | Msa1392330:intron | 30.0% |
| !! | GAGGAATAATTTGCTTCTTT+GGG | - | tig0021492:97222-97241 | Msa1392330:intron | 30.0% |
| ! | AAAGTCAAAGCTCTAATTAG+AGG | + | tig0021492:97454-97473 | None:intergenic | 30.0% |
| !! | CATTGTTCTAAAACTCACTT+TGG | - | tig0021492:97690-97709 | Msa1392330:intron | 30.0% |
| GAATTTGGATCATTTATGGA+AGG | + | tig0021492:97888-97907 | None:intergenic | 30.0% | |
| CTACTATTGGTCAAATTACT+CGG | + | tig0021492:97910-97929 | None:intergenic | 30.0% | |
| TACGAAAATGCTAGTAATGA+TGG | + | tig0021492:98045-98064 | None:intergenic | 30.0% | |
| TCGTAGAGATAAGACTTAAT+TGG | - | tig0021492:98060-98079 | Msa1392330:intron | 30.0% | |
| !! | AATAAAGACTTGTTTTTCGG+CGG | + | tig0021492:98112-98131 | None:intergenic | 30.0% |
| GGTTGTAAGATAAATCCTAA+AGG | + | tig0021492:98178-98197 | None:intergenic | 30.0% | |
| GGTTTAAGGGTAAACTTTAA+TGG | + | tig0021492:98199-98218 | None:intergenic | 30.0% | |
| !! | CCACTATTTTCTTTTAACTG+TGG | + | tig0021492:98259-98278 | None:intergenic | 30.0% |
| CCACAGTTAAAAGAAAATAG+TGG | - | tig0021492:98256-98275 | Msa1392330:intron | 30.0% | |
| ! | AAATAGTGGCAAGTTTTCAT+AGG | - | tig0021492:98270-98289 | Msa1392330:intron | 30.0% |
| ATGCCTTTAATCACGAATTT+AGG | + | tig0021492:98388-98407 | None:intergenic | 30.0% | |
| TTCAGAACTAATCGTAGTTA+TGG | + | tig0021492:98430-98449 | None:intergenic | 30.0% | |
| !! | TGAAAGATCCCAAGTTTTAA+AGG | - | tig0021492:98446-98465 | Msa1392330:intron | 30.0% |
| ! | TATTTCCTTCATTCACCTTT+TGG | + | tig0021492:98964-98983 | None:intergenic | 30.0% |
| TGAATGAAGGAAATAAGCAA+CGG | - | tig0021492:98969-98988 | Msa1392330:intron | 30.0% | |
| AAGAACAAACAAAAGAGACA+AGG | - | tig0021492:99025-99044 | Msa1392330:intron | 30.0% | |
| TATGACTATATTCAAGTCTC+CGG | + | tig0021492:99415-99434 | None:intergenic | 30.0% | |
| GTCATAGTAGTCATATTTGT+AGG | - | tig0021492:99429-99448 | Msa1392330:intron | 30.0% | |
| !! | GTCGTTTTATGCTATTAACA+TGG | - | tig0021492:99464-99483 | Msa1392330:intron | 30.0% |
| TGAATTTGTGAACAAACTCA+CGG | + | tig0021492:99493-99512 | None:intergenic | 30.0% | |
| GATATGAATTGTTTGGAAGT+TGG | - | tig0021492:99660-99679 | Msa1392330:intron | 30.0% | |
| ! | AATCAATCTTAGAGCATTTC+TGG | - | tig0021492:100541-100560 | Msa1392330:intron | 30.0% |
| !!! | TCAATTATTTTAGTGGTCCT+TGG | - | tig0021492:100914-100933 | Msa1392330:intron | 30.0% |
| ! | TCATCTTATTTGTAATCTGG+TGG | - | tig0021492:100953-100972 | Msa1392330:intron | 30.0% |
| ! | CATCTTATTTGTAATCTGGT+GGG | - | tig0021492:100954-100973 | Msa1392330:intron | 30.0% |
| ! | ATCTTATTTGTAATCTGGTG+GGG | - | tig0021492:100955-100974 | Msa1392330:intron | 30.0% |
| !! | TTCCTTCCATTTTAAGTGAA+GGG | + | tig0021492:101019-101038 | None:intergenic | 30.0% |
| !! | TTTCCTTCCATTTTAAGTGA+AGG | + | tig0021492:101020-101039 | None:intergenic | 30.0% |
| AAAAGCTGAAGAAGAAACAT+TGG | + | tig0021492:101207-101226 | None:intergenic | 30.0% | |
| !! | TCTTCAGCTTTTTGTCATTT+TGG | - | tig0021492:101215-101234 | Msa1392330:intron | 30.0% |
| !! | ATTATTTTACAAGCACAGCA+AGG | - | tig0021492:101286-101305 | Msa1392330:intron | 30.0% |
| !! | TTATTTTACAAGCACAGCAA+GGG | - | tig0021492:101287-101306 | Msa1392330:intron | 30.0% |
| TCAACAAAGGTTTACAGAAA+AGG | - | tig0021492:101430-101449 | Msa1392330:intron | 30.0% | |
| CAACAAAGGTTTACAGAAAA+GGG | - | tig0021492:101431-101450 | Msa1392330:intron | 30.0% | |
| ! | TTTTGTGTTTCCTTCCATTA+AGG | - | tig0021492:101475-101494 | Msa1392330:intron | 30.0% |
| TTTGTGTTTCCTTCCATTAA+GGG | - | tig0021492:101476-101495 | Msa1392330:intron | 30.0% | |
| ! | CTTGGTTTATCTGTTTTATC+TGG | - | tig0021492:101507-101526 | Msa1392330:intron | 30.0% |
| AAGAAAAGCCAAGAAAACAA+AGG | + | tig0021492:101556-101575 | None:intergenic | 30.0% | |
| TCATTTGGAAGATAATGTTG+AGG | - | tig0021492:101731-101750 | Msa1392330:CDS | 30.0% | |
| ! | CTTCTTCTTCCTGTTCTTTT+TGG | + | tig0021492:95842-95861 | None:intergenic | 35.0% |
| ACTTCTTCAAGCCATGAAAA+TGG | + | tig0021492:95967-95986 | None:intergenic | 35.0% | |
| AAGACAACAACTACGACTAT+GGG | - | tig0021492:95992-96011 | Msa1392330:CDS | 35.0% | |
| TCTGTTTCAGAACCTGTTTA+TGG | - | tig0021492:96072-96091 | Msa1392330:CDS | 35.0% | |
| ! | TGAAAAAAAGGCAAGAGTGT+GGG | + | tig0021492:96500-96519 | None:intergenic | 35.0% |
| CTCAGTTTCCTTCATGTTAA+AGG | + | tig0021492:96678-96697 | None:intergenic | 35.0% | |
| TGGCATCAAGATCAAACTTA+TGG | - | tig0021492:96703-96722 | Msa1392330:CDS | 35.0% | |
| TAGTAGATGAATGTGATGGT+CGG | + | tig0021492:96961-96980 | None:intergenic | 35.0% | |
| !! | CTGAAGGAAACATGTTTTGA+TGG | + | tig0021492:97405-97424 | None:intergenic | 35.0% |
| TTAGATAGGAAGACCACATA+TGG | - | tig0021492:97750-97769 | Msa1392330:intron | 35.0% | |
| TAGATAGGAAGACCACATAT+GGG | - | tig0021492:97751-97770 | Msa1392330:intron | 35.0% | |
| !! | ATGGGCAAGTTTTATGGATA+AGG | - | tig0021492:97769-97788 | Msa1392330:intron | 35.0% |
| !! | GCAAGTTTTATGGATAAGGA+AGG | - | tig0021492:97773-97792 | Msa1392330:intron | 35.0% |
| GAAAGAAACTTCATCGATCT+TGG | - | tig0021492:97844-97863 | Msa1392330:intron | 35.0% | |
| CTCGGAATTTGGATCATTTA+TGG | + | tig0021492:97892-97911 | None:intergenic | 35.0% | |
| TGGTCAAATTACTCGGAATT+TGG | + | tig0021492:97903-97922 | None:intergenic | 35.0% | |
| GATCATAAAGTTCAAGGTTG+GGG | + | tig0021492:97975-97994 | None:intergenic | 35.0% | |
| CGATCATAAAGTTCAAGGTT+GGG | + | tig0021492:97976-97995 | None:intergenic | 35.0% | |
| TCGATCATAAAGTTCAAGGT+TGG | + | tig0021492:97977-97996 | None:intergenic | 35.0% | |
| CAGTTCGATCATAAAGTTCA+AGG | + | tig0021492:97981-98000 | None:intergenic | 35.0% | |
| ATGAAGAACAAAAGATTGGC+AGG | + | tig0021492:98007-98026 | None:intergenic | 35.0% | |
| AGATAAATCCTAAAGGAGCA+TGG | + | tig0021492:98171-98190 | None:intergenic | 35.0% | |
| GTGTGAAGTTGAAGGTTTAA+GGG | + | tig0021492:98212-98231 | None:intergenic | 35.0% | |
| TGTGTGAAGTTGAAGGTTTA+AGG | + | tig0021492:98213-98232 | None:intergenic | 35.0% | |
| !! | CTTTTAACTGTGGGCTAATA+GGG | + | tig0021492:98249-98268 | None:intergenic | 35.0% |
| !! | TCTTTTAACTGTGGGCTAAT+AGG | + | tig0021492:98250-98269 | None:intergenic | 35.0% |
| ! | CATTAGCAATTCTTGGTTCT+TGG | + | tig0021492:98319-98338 | None:intergenic | 35.0% |
| CAAGAACCAAGAATTGCTAA+TGG | - | tig0021492:98317-98336 | Msa1392330:intron | 35.0% | |
| CTTGAACCATTAGCAATTCT+TGG | + | tig0021492:98326-98345 | None:intergenic | 35.0% | |
| CAAGAATTGCTAATGGTTCA+AGG | - | tig0021492:98324-98343 | Msa1392330:intron | 35.0% | |
| CTGGAAAAAATCTTGAAAGG+CGG | + | tig0021492:98351-98370 | None:intergenic | 35.0% | |
| !!! | GCCTTTCAAGATTTTTTCCA+GGG | - | tig0021492:98350-98369 | Msa1392330:intron | 35.0% |
| ACCCTGGAAAAAATCTTGAA+AGG | + | tig0021492:98354-98373 | None:intergenic | 35.0% | |
| !!! | TGTTTTCTTGTTTTGCTCCT+TGG | + | tig0021492:98608-98627 | None:intergenic | 35.0% |
| ! | TCCTTTCTCTCTAGGTTTTT+GGG | + | tig0021492:98899-98918 | None:intergenic | 35.0% |
| TAACACCAAAAGGTGAATGA+AGG | - | tig0021492:98956-98975 | Msa1392330:intron | 35.0% | |
| AACAAAAGAGACAAGGACAA+AGG | - | tig0021492:99032-99051 | Msa1392330:intron | 35.0% | |
| ACAAAAGAGACAAGGACAAA+GGG | - | tig0021492:99033-99052 | Msa1392330:intron | 35.0% | |
| GAGAAGAGAAAGGAAGAAAT+GGG | + | tig0021492:99181-99200 | None:intergenic | 35.0% | |
| TGAGAAGAGAAAGGAAGAAA+TGG | + | tig0021492:99182-99201 | None:intergenic | 35.0% | |
| TCAGAGACAAGAAGAAGAAA+GGG | + | tig0021492:99220-99239 | None:intergenic | 35.0% | |
| TTCAGAGACAAGAAGAAGAA+AGG | + | tig0021492:99221-99240 | None:intergenic | 35.0% | |
| AAATAAACACCGCACTAAGA+CGG | + | tig0021492:99295-99314 | None:intergenic | 35.0% | |
| CCAAAGTCATTGTCATTGAT+CGG | + | tig0021492:99356-99375 | None:intergenic | 35.0% | |
| TGAATGAATGTGTGATGAGT+GGG | + | tig0021492:99801-99820 | None:intergenic | 35.0% | |
| ATGAATGAATGTGTGATGAG+TGG | + | tig0021492:99802-99821 | None:intergenic | 35.0% | |
| TTGCTCCATTCTCTGAATTA+GGG | - | tig0021492:99884-99903 | Msa1392330:intron | 35.0% | |
| GAAAACCCTAATTCAGAGAA+TGG | + | tig0021492:99892-99911 | None:intergenic | 35.0% | |
| TAACACGTTTGATTAGGGTA+GGG | + | tig0021492:100078-100097 | None:intergenic | 35.0% | |
| ATAACACGTTTGATTAGGGT+AGG | + | tig0021492:100079-100098 | None:intergenic | 35.0% | |
| CGGTACTTATAGAATAGAAG+AGG | + | tig0021492:100114-100133 | None:intergenic | 35.0% | |
| TGATTCTGATTCTTAGTGGA+TGG | + | tig0021492:100341-100360 | None:intergenic | 35.0% | |
| !! | CTACTGATTCTGATTCTTAG+TGG | + | tig0021492:100345-100364 | None:intergenic | 35.0% |
| ! | ACGAAGTAAGCATGGATTAT+GGG | + | tig0021492:100439-100458 | None:intergenic | 35.0% |
| ATGTAATCATCTACCCTTGA+TGG | - | tig0021492:100607-100626 | Msa1392330:intron | 35.0% | |
| CTGGAATTATGAGCAGAAAA+TGG | - | tig0021492:101142-101161 | Msa1392330:intron | 35.0% | |
| !!! | CAGCTTTTTGTCATTTTGGT+TGG | - | tig0021492:101219-101238 | Msa1392330:intron | 35.0% |
| ACCTCAGTTAGACAAGAATA+AGG | - | tig0021492:101242-101261 | Msa1392330:intron | 35.0% | |
| CCTCAGTTAGACAAGAATAA+GGG | - | tig0021492:101243-101262 | Msa1392330:intron | 35.0% | |
| GCTGTGCTTGTAAAATAATG+CGG | + | tig0021492:101285-101304 | None:intergenic | 35.0% | |
| ! | TATTTTACAAGCACAGCAAG+GGG | - | tig0021492:101288-101307 | Msa1392330:intron | 35.0% |
| AAGTAAAGGGTAAGTACACA+GGG | + | tig0021492:101328-101347 | None:intergenic | 35.0% | |
| TAAGTAAAGGGTAAGTACAC+AGG | + | tig0021492:101329-101348 | None:intergenic | 35.0% | |
| GAAGAACGGTACTAAGTAAA+GGG | + | tig0021492:101341-101360 | None:intergenic | 35.0% | |
| AGAAGAACGGTACTAAGTAA+AGG | + | tig0021492:101342-101361 | None:intergenic | 35.0% | |
| TTACTTAGTACCGTTCTTCT+TGG | - | tig0021492:101342-101361 | Msa1392330:intron | 35.0% | |
| ! | AAGTCAGGATAATGGCAAAA+AGG | + | tig0021492:101368-101387 | None:intergenic | 35.0% |
| GAAAAAGAACCCTTAATGGA+AGG | + | tig0021492:101488-101507 | None:intergenic | 35.0% | |
| CCAAGAAAAAGAACCCTTAA+TGG | + | tig0021492:101492-101511 | None:intergenic | 35.0% | |
| ! | CCATTAAGGGTTCTTTTTCT+TGG | - | tig0021492:101489-101508 | Msa1392330:intron | 35.0% |
| GCTTCAAACATAAAATGCTC+AGG | + | tig0021492:101534-101553 | None:intergenic | 35.0% | |
| !!! | GTTTGAAGCCTTTGTTTTCT+TGG | - | tig0021492:101545-101564 | Msa1392330:intron | 35.0% |
| TTGCACTTGTATGTTGTTCT+GGG | - | tig0021492:101574-101593 | Msa1392330:intron | 35.0% | |
| CATTATCTTCCAAATGACTC+TGG | + | tig0021492:101728-101747 | None:intergenic | 35.0% | |
| ATAATGTTGAGGAAAATGCC+CGG | - | tig0021492:101742-101761 | Msa1392330:CDS | 35.0% | |
| ! | GTCAATTTCTTTTCGGACAA+TGG | - | tig0021492:101806-101825 | Msa1392330:CDS | 35.0% |
| ! | TTCTTTTCGGACAATGGAAA+AGG | - | tig0021492:101812-101831 | Msa1392330:CDS | 35.0% |
| ! | TCTTTTCGGACAATGGAAAA+GGG | - | tig0021492:101813-101832 | Msa1392330:CDS | 35.0% |
| CATGAAAATGGAGGTAAGTG+TGG | + | tig0021492:95955-95974 | None:intergenic | 40.0% | |
| ! | CACACTTACCTCCATTTTCA+TGG | - | tig0021492:95953-95972 | Msa1392330:CDS | 40.0% |
| TCTTCAAGCCATGAAAATGG+AGG | + | tig0021492:95964-95983 | None:intergenic | 40.0% | |
| CAAGACAACAACTACGACTA+TGG | - | tig0021492:95991-96010 | Msa1392330:CDS | 40.0% | |
| ATTCATGTTGCCACCAGAAA+TGG | - | tig0021492:96017-96036 | Msa1392330:CDS | 40.0% | |
| AGAACCTGTTTATGGCATTC+CGG | - | tig0021492:96080-96099 | Msa1392330:CDS | 40.0% | |
| GAGAGATCAACAGGTCAATT+TGG | - | tig0021492:96117-96136 | Msa1392330:CDS | 40.0% | |
| GTTCGTCGAATGTGAAAACA+TGG | + | tig0021492:96186-96205 | None:intergenic | 40.0% | |
| ! | TAGTAAATAACGGGAGACAG+GGG | + | tig0021492:96252-96271 | None:intergenic | 40.0% |
| ! | CTAGTAAATAACGGGAGACA+GGG | + | tig0021492:96253-96272 | None:intergenic | 40.0% |
| ! | TCTAGTAAATAACGGGAGAC+AGG | + | tig0021492:96254-96273 | None:intergenic | 40.0% |
| !! | TTTTGAGTGAAACGCACGTA+AGG | + | tig0021492:96402-96421 | None:intergenic | 40.0% |
| ! | GAAAAAAAGGCAAGAGTGTG+GGG | + | tig0021492:96499-96518 | None:intergenic | 40.0% |
| GTGAAAAAAAGGCAAGAGTG+TGG | + | tig0021492:96501-96520 | None:intergenic | 40.0% | |
| ATGCTTTGCTTGCGATGATT+TGG | + | tig0021492:96744-96763 | None:intergenic | 40.0% | |
| ! | TGAGACATAGTGGAAACGTA+TGG | - | tig0021492:96901-96920 | Msa1392330:CDS | 40.0% |
| ! | CATAGTGGAAACGTATGGAT+TGG | - | tig0021492:96906-96925 | Msa1392330:CDS | 40.0% |
| ! | CTGATGAAAGCAAGTTCTGA+AGG | + | tig0021492:97421-97440 | None:intergenic | 40.0% |
| CCATAAAACTTGCCCATATG+TGG | + | tig0021492:97766-97785 | None:intergenic | 40.0% | |
| ! | CCACATATGGGCAAGTTTTA+TGG | - | tig0021492:97763-97782 | Msa1392330:intron | 40.0% |
| GATAAGGAAGGTAGAGTAAG+TGG | - | tig0021492:97785-97804 | Msa1392330:intron | 40.0% | |
| TTCTTTCCAGGAACTGCAAA+GGG | + | tig0021492:97831-97850 | None:intergenic | 40.0% | |
| TTTCTTTCCAGGAACTGCAA+AGG | + | tig0021492:97832-97851 | None:intergenic | 40.0% | |
| GATCGATGAAGTTTCTTTCC+AGG | + | tig0021492:97843-97862 | None:intergenic | 40.0% | |
| GAAACTTCATCGATCTTGGT+CGG | - | tig0021492:97848-97867 | Msa1392330:intron | 40.0% | |
| !! | TATGGAAGGCATTGATGACA+AGG | + | tig0021492:97874-97893 | None:intergenic | 40.0% |
| ACCCCATGAAATCTCTTAGT+GGG | + | tig0021492:98087-98106 | None:intergenic | 40.0% | |
| AACCCCATGAAATCTCTTAG+TGG | + | tig0021492:98088-98107 | None:intergenic | 40.0% | |
| TACAGTCTATAGTAGGAGAG+TGG | + | tig0021492:98140-98159 | None:intergenic | 40.0% | |
| GAAGGTTTGTGTGAAGTTGA+AGG | + | tig0021492:98220-98239 | None:intergenic | 40.0% | |
| !!! | CGCCTTTCAAGATTTTTTCC+AGG | - | tig0021492:98349-98368 | Msa1392330:intron | 40.0% |
| TTAGGAATCAACAACTACCC+TGG | + | tig0021492:98370-98389 | None:intergenic | 40.0% | |
| AGCATAAGACCTTTACCATG+AGG | - | tig0021492:98562-98581 | Msa1392330:intron | 40.0% | |
| TAAGACCTTTACCATGAGGA+TGG | - | tig0021492:98566-98585 | Msa1392330:intron | 40.0% | |
| ACCCAAAAACCTAGAGAGAA+AGG | - | tig0021492:98895-98914 | Msa1392330:intron | 40.0% | |
| ! | GTCCTTTCTCTCTAGGTTTT+TGG | + | tig0021492:98900-98919 | None:intergenic | 40.0% |
| TCTTGATGTCCTTTCTCTCT+AGG | + | tig0021492:98907-98926 | None:intergenic | 40.0% | |
| AGAGAGAAAGGACATCAAGA+AGG | - | tig0021492:98907-98926 | Msa1392330:intron | 40.0% | |
| CAGCACAAACTAACACCAAA+AGG | - | tig0021492:98946-98965 | Msa1392330:intron | 40.0% | |
| AAGGAAATAAGCAACGGAGA+AGG | - | tig0021492:98975-98994 | Msa1392330:intron | 40.0% | |
| CAGAGACAAGAAGAAGAAAG+GGG | + | tig0021492:99219-99238 | None:intergenic | 40.0% | |
| ! | TTTGATTTCCCGTCTTTGTG+CGG | - | tig0021492:99254-99273 | Msa1392330:intron | 40.0% |
| AAAAACACACCGCACAAAGA+CGG | + | tig0021492:99266-99285 | None:intergenic | 40.0% | |
| ! | TTTGATTTCCCGTCTTAGTG+CGG | - | tig0021492:99283-99302 | Msa1392330:intron | 40.0% |
| AATAAACACCGCACTAAGAC+GGG | + | tig0021492:99294-99313 | None:intergenic | 40.0% | |
| GTGCGGTGTTTATTTGATTC+AGG | - | tig0021492:99300-99319 | Msa1392330:intron | 40.0% | |
| CCGATCAATGACAATGACTT+TGG | - | tig0021492:99353-99372 | Msa1392330:intron | 40.0% | |
| ATCCGGAGATATGAGTATTC+CGG | - | tig0021492:99393-99412 | Msa1392330:intron | 40.0% | |
| GGATGAGAGGAAGAAAGAAA+AGG | - | tig0021492:99682-99701 | Msa1392330:intron | 40.0% | |
| GAGAGAGAAAGAGAAAGAAG+AGG | + | tig0021492:99855-99874 | None:intergenic | 40.0% | |
| GTTGCTCCATTCTCTGAATT+AGG | - | tig0021492:99883-99902 | Msa1392330:intron | 40.0% | |
| AAGGAAAAGAGAGCTTACAG+TGG | + | tig0021492:99973-99992 | None:intergenic | 40.0% | |
| AACACGTTTGATTAGGGTAG+GGG | + | tig0021492:100077-100096 | None:intergenic | 40.0% | |
| AGGGTTAAGAAGGGTTTGAT+GGG | + | tig0021492:100194-100213 | None:intergenic | 40.0% | |
| TAGGGTTAAGAAGGGTTTGA+TGG | + | tig0021492:100195-100214 | None:intergenic | 40.0% | |
| ! | GACGAAGTAAGCATGGATTA+TGG | + | tig0021492:100440-100459 | None:intergenic | 40.0% |
| TATCAAGCATCTAGCACTCT+TGG | + | tig0021492:100578-100597 | None:intergenic | 40.0% | |
| ! | AATCATCTACCCTTGATGGT+TGG | - | tig0021492:100611-100630 | Msa1392330:intron | 40.0% |
| TACGCATAACCAACCATCAA+GGG | + | tig0021492:100623-100642 | None:intergenic | 40.0% | |
| ATACGCATAACCAACCATCA+AGG | + | tig0021492:100624-100643 | None:intergenic | 40.0% | |
| ATGGATACCAGAAATCCTCT+GGG | + | tig0021492:100714-100733 | None:intergenic | 40.0% | |
| CATGCGTGGAATCTGTATTT+CGG | - | tig0021492:100746-100765 | Msa1392330:intron | 40.0% | |
| ATGCGTGGAATCTGTATTTC+GGG | - | tig0021492:100747-100766 | Msa1392330:intron | 40.0% | |
| CTTGATTATGGATTCGAGAG+CGG | + | tig0021492:100882-100901 | None:intergenic | 40.0% | |
| GGGGTCTAGGTGAAATTATT+AGG | - | tig0021492:100974-100993 | Msa1392330:intron | 40.0% | |
| TGCCCTTCACTTAAAATGGA+AGG | - | tig0021492:101014-101033 | Msa1392330:intron | 40.0% | |
| GAAATACAAGTGTGAGGAAG+AGG | + | tig0021492:101092-101111 | None:intergenic | 40.0% | |
| GCTGAAGAAGAAACATTGGA+AGG | + | tig0021492:101203-101222 | None:intergenic | 40.0% | |
| CCCTTATTCTTGTCTAACTG+AGG | + | tig0021492:101246-101265 | None:intergenic | 40.0% | |
| ! | ATTTTACAAGCACAGCAAGG+GGG | - | tig0021492:101289-101308 | Msa1392330:intron | 40.0% |
| AAGGTAGGAAGTCAGGATAA+TGG | + | tig0021492:101376-101395 | None:intergenic | 40.0% | |
| !!! | TCCTGACTTCCTACCTTTTT+TGG | - | tig0021492:101379-101398 | Msa1392330:intron | 40.0% |
| !!! | ACTTCCTACCTTTTTTGGCT+TGG | - | tig0021492:101384-101403 | Msa1392330:intron | 40.0% |
| ACTACCAAGCCAAAAAAGGT+AGG | + | tig0021492:101391-101410 | None:intergenic | 40.0% | |
| !!! | ACCTTTTTTGGCTTGGTAGT+CGG | - | tig0021492:101391-101410 | Msa1392330:intron | 40.0% |
| CTTGCACTTGTATGTTGTTC+TGG | - | tig0021492:101573-101592 | Msa1392330:intron | 40.0% | |
| CTAAACAATCTGCAACTGGA+CGG | + | tig0021492:101623-101642 | None:intergenic | 40.0% | |
| AGAGCTAAACAATCTGCAAC+TGG | + | tig0021492:101627-101646 | None:intergenic | 40.0% | |
| ! | AGTTGCAGATTGTTTAGCTC+TGG | - | tig0021492:101626-101645 | Msa1392330:intron | 40.0% |
| !! | GTTGCAGATTGTTTAGCTCT+GGG | - | tig0021492:101627-101646 | Msa1392330:intron | 40.0% |
| TCTGGGAAATCTACAAGACT+TGG | - | tig0021492:101644-101663 | Msa1392330:intron | 40.0% | |
| ATCTACAAGACTTGGAAGCT+AGG | - | tig0021492:101652-101671 | Msa1392330:intron | 40.0% | |
| ATGACTCTGGCTAGTGATAA+GGG | + | tig0021492:101715-101734 | None:intergenic | 40.0% | |
| AATGACTCTGGCTAGTGATA+AGG | + | tig0021492:101716-101735 | None:intergenic | 40.0% | |
| TATCACTAGCCAGAGTCATT+TGG | - | tig0021492:101716-101735 | Msa1392330:CDS | 40.0% | |
| GATTCATCTGAATACCTACC+AGG | + | tig0021492:101774-101793 | None:intergenic | 40.0% | |
| TCAGATGAATCAACAAAGCG+TGG | - | tig0021492:101783-101802 | Msa1392330:CDS | 40.0% | |
| CAGATGAATCAACAAAGCGT+GGG | - | tig0021492:101784-101803 | Msa1392330:CDS | 40.0% | |
| ! | AGCGTGGGTCAATTTCTTTT+CGG | - | tig0021492:101799-101818 | Msa1392330:CDS | 40.0% |
| ATGGCACAATAACTTGGGTT+GGG | + | tig0021492:101941-101960 | Msa1392340:intron | 40.0% | |
| TATGGCACAATAACTTGGGT+TGG | + | tig0021492:101942-101961 | Msa1392340:intron | 40.0% | |
| ! | ACCATCTTGTGCTTGACTTG+GGG | + | tig0021492:96049-96068 | None:intergenic | 45.0% |
| CACCATCTTGTGCTTGACTT+GGG | + | tig0021492:96050-96069 | None:intergenic | 45.0% | |
| ACACCATCTTGTGCTTGACT+TGG | + | tig0021492:96051-96070 | None:intergenic | 45.0% | |
| AGAACCGGAATGCCATAAAC+AGG | + | tig0021492:96087-96106 | None:intergenic | 45.0% | |
| TGTTTATGGCATTCCGGTTC+TGG | - | tig0021492:96086-96105 | Msa1392330:CDS | 45.0% | |
| ATCGCAAGCAAAGCATGATC+TGG | - | tig0021492:96748-96767 | Msa1392330:CDS | 45.0% | |
| CCAGGTTTGTCTTCTTCTGA+AGG | + | tig0021492:97347-97366 | None:intergenic | 45.0% | |
| CCTTCAGAAGAAGACAAACC+TGG | - | tig0021492:97344-97363 | Msa1392330:intron | 45.0% | |
| ! | ACTCTAAAGAGACTCTGACC+AGG | + | tig0021492:97365-97384 | None:intergenic | 45.0% |
| ! | ACATCATGCTCTGAACGCAA+AGG | + | tig0021492:97551-97570 | None:intergenic | 45.0% |
| GCCCCACTAAGAGATTTCAT+GGG | - | tig0021492:98082-98101 | Msa1392330:intron | 45.0% | |
| CCCCATGAAATCTCTTAGTG+GGG | + | tig0021492:98086-98105 | None:intergenic | 45.0% | |
| CCCCACTAAGAGATTTCATG+GGG | - | tig0021492:98083-98102 | Msa1392330:intron | 45.0% | |
| AGTCTATAGTAGGAGAGTGG+TGG | + | tig0021492:98137-98156 | None:intergenic | 45.0% | |
| TGAGGGCTACAGTCTATAGT+AGG | + | tig0021492:98147-98166 | None:intergenic | 45.0% | |
| ! | TCCTAAAGGAGCATGGTTGA+GGG | + | tig0021492:98164-98183 | None:intergenic | 45.0% |
| ! | ATCCTAAAGGAGCATGGTTG+AGG | + | tig0021492:98165-98184 | None:intergenic | 45.0% |
| GCACATTCATTTCCCAAGCA+TGG | - | tig0021492:98292-98311 | Msa1392330:intron | 45.0% | |
| ! | TTGGTTCTTGGTCCATGCTT+GGG | + | tig0021492:98307-98326 | None:intergenic | 45.0% |
| ATGGACCATCCTCATGGTAA+AGG | + | tig0021492:98574-98593 | None:intergenic | 45.0% | |
| !!! | CTAGGTTTTTGGGTGTCTCT+GGG | + | tig0021492:98889-98908 | None:intergenic | 45.0% |
| !!! | TCTAGGTTTTTGGGTGTCTC+TGG | + | tig0021492:98890-98909 | None:intergenic | 45.0% |
| GCTAGGGTTTGAGAAGAGAA+AGG | + | tig0021492:99191-99210 | None:intergenic | 45.0% | |
| CAAGAAGAAGAAAGGGGTGA+CGG | + | tig0021492:99213-99232 | None:intergenic | 45.0% | |
| AAAACACACCGCACAAAGAC+GGG | + | tig0021492:99265-99284 | None:intergenic | 45.0% | |
| CTCCGGAATACTCATATCTC+CGG | + | tig0021492:99398-99417 | None:intergenic | 45.0% | |
| TGTTTGGAAGTTGGGATGAG+AGG | - | tig0021492:99669-99688 | Msa1392330:intron | 45.0% | |
| AGATAGATGACCGAAGCAAG+TGG | - | tig0021492:99713-99732 | Msa1392330:intron | 45.0% | |
| GATAGATGACCGAAGCAAGT+GGG | - | tig0021492:99714-99733 | Msa1392330:intron | 45.0% | |
| TGTGATGAGTGGGACTTTGT+TGG | + | tig0021492:99791-99810 | None:intergenic | 45.0% | |
| CTACACAGACGAAGTAAGCA+TGG | + | tig0021492:100447-100466 | None:intergenic | 45.0% | |
| TGGATACCAGAAATCCTCTG+GGG | + | tig0021492:100713-100732 | None:intergenic | 45.0% | |
| CATGGATACCAGAAATCCTC+TGG | + | tig0021492:100715-100734 | None:intergenic | 45.0% | |
| !! | AGATTTGCTGCCGAAGCATT+CGG | - | tig0021492:100784-100803 | Msa1392330:intron | 45.0% |
| CGCTCTCGAATCCATAATCA+AGG | - | tig0021492:100880-100899 | Msa1392330:intron | 45.0% | |
| TTTGTAATCTGGTGGGGTCT+AGG | - | tig0021492:100961-100980 | Msa1392330:intron | 45.0% | |
| GACGTGCCCTTCACTTAAAA+TGG | - | tig0021492:101010-101029 | Msa1392330:intron | 45.0% | |
| AGGTTCTGCAAATCCCATGT+TGG | + | tig0021492:101067-101086 | None:intergenic | 45.0% | |
| GGAGGAGAAATACAAGTGTG+AGG | + | tig0021492:101098-101117 | None:intergenic | 45.0% | |
| GGCAAAAAGGCCAAGAAGAA+CGG | + | tig0021492:101355-101374 | None:intergenic | 45.0% | |
| GCCAAAAAAGGTAGGAAGTC+AGG | + | tig0021492:101383-101402 | None:intergenic | 45.0% | |
| TCCGACTACCAAGCCAAAAA+AGG | + | tig0021492:101395-101414 | None:intergenic | 45.0% | |
| AAGACTTGGAAGCTAGGACT+AGG | - | tig0021492:101658-101677 | Msa1392330:intron | 45.0% | |
| AATACCTACCAGGACTAAGC+CGG | + | tig0021492:101764-101783 | None:intergenic | 45.0% | |
| !! | GAAAAGGGTGTTGCTTCAAC+TGG | - | tig0021492:101828-101847 | Msa1392330:CDS | 45.0% |
| ! | TGGCACAATAACTTGGGTTG+GGG | + | tig0021492:101940-101959 | Msa1392340:intron | 45.0% |
| !! | AAAATTTAAAAATTGATTAT+AGG | + | tig0021492:98508-98527 | None:intergenic | 5.0% |
| !! | CAATAATTATTAATTAATAA+AGG | + | tig0021492:99992-100011 | None:intergenic | 5.0% |
| CAAGAGCAACAATGGTGGCA+CGG | + | tig0021492:95904-95923 | None:intergenic | 50.0% | |
| TGGAGCAAGAGCAACAATGG+TGG | + | tig0021492:95909-95928 | None:intergenic | 50.0% | |
| TGGTGGAGCAAGAGCAACAA+TGG | + | tig0021492:95912-95931 | None:intergenic | 50.0% | |
| TAAGTGTGGAGCTGATGGCT+GGG | + | tig0021492:95941-95960 | None:intergenic | 50.0% | |
| ! | CTTGGGGGATATGCCATTTC+TGG | + | tig0021492:96033-96052 | None:intergenic | 50.0% |
| !! | CCATCTTGTGCTTGACTTGG+GGG | + | tig0021492:96048-96067 | None:intergenic | 50.0% |
| ! | GCACTGACAGAGAGATCAAC+AGG | - | tig0021492:96108-96127 | Msa1392330:CDS | 50.0% |
| TCCAGGAACTGCAAAGGGTT+GGG | + | tig0021492:97826-97845 | None:intergenic | 50.0% | |
| TTCCAGGAACTGCAAAGGGT+TGG | + | tig0021492:97827-97846 | None:intergenic | 50.0% | |
| GGCCCCACTAAGAGATTTCA+TGG | - | tig0021492:98081-98100 | Msa1392330:intron | 50.0% | |
| ! | ACTGTGGGCTAATAGGGCAT+GGG | + | tig0021492:98243-98262 | None:intergenic | 50.0% |
| ! | AACTGTGGGCTAATAGGGCA+TGG | + | tig0021492:98244-98263 | None:intergenic | 50.0% |
| ! | CTTGGTTCTTGGTCCATGCT+TGG | + | tig0021492:98308-98327 | None:intergenic | 50.0% |
| ACCATGAGGATGGTCCATGA+TGG | - | tig0021492:98576-98595 | Msa1392330:intron | 50.0% | |
| TCCATCATGGACCATCCTCA+TGG | + | tig0021492:98580-98599 | None:intergenic | 50.0% | |
| ! | GTCCATGATGGAAGTCACCA+AGG | - | tig0021492:98588-98607 | Msa1392330:intron | 50.0% |
| ! | CTCCTTGGTGACTTCCATCA+TGG | + | tig0021492:98593-98612 | None:intergenic | 50.0% |
| !!! | TTTTTGGGTGTCTCTGGGTG+GGG | + | tig0021492:98884-98903 | None:intergenic | 50.0% |
| !!! | GTTTTTGGGTGTCTCTGGGT+GGG | + | tig0021492:98885-98904 | None:intergenic | 50.0% |
| TGTCGTCAACGTTGCAGATC+CGG | - | tig0021492:99376-99395 | Msa1392330:intron | 50.0% | |
| GTCCACAAACCCACTTGCTT+CGG | + | tig0021492:99726-99745 | None:intergenic | 50.0% | |
| ! | AAGTGGGTTTGTGGACGAAG+CGG | - | tig0021492:99730-99749 | Msa1392330:intron | 50.0% |
| ! | AAAAAAGGCACAAGCCCCAG+AGG | - | tig0021492:100696-100715 | Msa1392330:intron | 50.0% |
| TTCGGCAGCAAATCTGGACA+GGG | + | tig0021492:100779-100798 | None:intergenic | 50.0% | |
| GAATGCTTCGGCAGCAAATC+TGG | + | tig0021492:100785-100804 | None:intergenic | 50.0% | |
| TGTCACCACACCGAATGCTT+CGG | + | tig0021492:100797-100816 | None:intergenic | 50.0% | |
| ACAAGTGTGAGGAAGAGGCA+AGG | + | tig0021492:101087-101106 | None:intergenic | 50.0% | |
| ACTTGGAAGCTAGGACTAGG+AGG | - | tig0021492:101661-101680 | Msa1392330:intron | 50.0% | |
| ATACCTACCAGGACTAAGCC+GGG | + | tig0021492:101763-101782 | None:intergenic | 50.0% | |
| !! | ACTTGGGTTGGGGATTGCAT+GGG | + | tig0021492:101930-101949 | Msa1392340:intron | 50.0% |
| !! | AACTTGGGTTGGGGATTGCA+TGG | + | tig0021492:101931-101950 | Msa1392340:intron | 50.0% |
| GTAAGTGTGGAGCTGATGGC+TGG | + | tig0021492:95942-95961 | None:intergenic | 55.0% | |
| GGAGGTAAGTGTGGAGCTGA+TGG | + | tig0021492:95946-95965 | None:intergenic | 55.0% | |
| ! | GGGGGATATGCCATTTCTGG+TGG | + | tig0021492:96030-96049 | None:intergenic | 55.0% |
| CCCCCAAGTCAAGCACAAGA+TGG | - | tig0021492:96045-96064 | Msa1392330:CDS | 55.0% | |
| CTCTCTGTCAGTGCCAGAAC+CGG | + | tig0021492:96102-96121 | None:intergenic | 55.0% | |
| ! | CAAGAGTGTGGGGAGCTGAT+TGG | + | tig0021492:96489-96508 | None:intergenic | 55.0% |
| GCCCTCAACCATGCTCCTTT+AGG | - | tig0021492:98160-98179 | Msa1392330:intron | 55.0% | |
| ! | CTGTGGGCTAATAGGGCATG+GGG | + | tig0021492:98242-98261 | None:intergenic | 55.0% |
| TCTCTGGGTGGGGTGTGTTT+GGG | + | tig0021492:98874-98893 | None:intergenic | 55.0% | |
| !!! | GGTTTTTGGGTGTCTCTGGG+TGG | + | tig0021492:98886-98905 | None:intergenic | 55.0% |
| ! | GAAGAAAGGGGTGACGGCTA+GGG | + | tig0021492:99207-99226 | None:intergenic | 55.0% |
| ! | AGAAGAAAGGGGTGACGGCT+AGG | + | tig0021492:99208-99227 | None:intergenic | 55.0% |
| ! | GACCGAAGCAAGTGGGTTTG+TGG | - | tig0021492:99721-99740 | Msa1392330:intron | 55.0% |
| TGTGGACGAAGCGGAAGGTT+CGG | - | tig0021492:99739-99758 | Msa1392330:intron | 55.0% | |
| GAAGGTTCGGAGGATACAGC+TGG | - | tig0021492:99752-99771 | Msa1392330:intron | 55.0% | |
| ! | CTGCTGCTGCTGTTGCTTGA+TGG | - | tig0021492:99934-99953 | Msa1392330:intron | 55.0% |
| CACAAGCCCCAGAGGATTTC+TGG | - | tig0021492:100704-100723 | Msa1392330:intron | 55.0% | |
| ACGCATGCTCTCTGACAGCA+TGG | + | tig0021492:100733-100752 | None:intergenic | 55.0% | |
| ! | ATGCTGTCAGAGAGCATGCG+TGG | - | tig0021492:100732-100751 | Msa1392330:intron | 55.0% |
| TCGGCAGCAAATCTGGACAG+GGG | + | tig0021492:100778-100797 | None:intergenic | 55.0% | |
| CTTCGGCAGCAAATCTGGAC+AGG | + | tig0021492:100780-100799 | None:intergenic | 55.0% | |
| CCAGTCTCCAACCTCTGCAA+GGG | + | tig0021492:101126-101145 | None:intergenic | 55.0% | |
| TCCAGTCTCCAACCTCTGCA+AGG | + | tig0021492:101127-101146 | None:intergenic | 55.0% | |
| GAAAATGCCCGGCTTAGTCC+TGG | - | tig0021492:101753-101772 | Msa1392330:CDS | 55.0% | |
| CACTACGGCTGGGAGAGAAA+AGG | + | tig0021492:101872-101891 | Msa1392340:intron | 55.0% | |
| !! | ATCCGGGTGGTGTTGCACTA+CGG | + | tig0021492:101887-101906 | Msa1392340:intron | 55.0% |
| ACCTGGAAGTGACGGTGATC+CGG | + | tig0021492:101904-101923 | Msa1392340:intron | 55.0% | |
| GATCACCGTCACTTCCAGGT+TGG | - | tig0021492:101904-101923 | Msa1392330:CDS | 55.0% | |
| ATGGGCCAACCTGGAAGTGA+CGG | + | tig0021492:101912-101931 | Msa1392340:intron | 55.0% | |
| CAATGGTGGCACGGTGGATG+TGG | + | tig0021492:95895-95914 | None:intergenic | 60.0% | |
| GAGCAACAATGGTGGCACGG+TGG | + | tig0021492:95901-95920 | None:intergenic | 60.0% | |
| ! | TGATGGCTGGGTGGTACTGG+TGG | + | tig0021492:95929-95948 | None:intergenic | 60.0% |
| AGCTGATGGCTGGGTGGTAC+TGG | + | tig0021492:95932-95951 | None:intergenic | 60.0% | |
| GCCCAACCCTTTGCAGTTCC+TGG | - | tig0021492:97822-97841 | Msa1392330:intron | 60.0% | |
| GGGCTAATAGGGCATGGGGA+AGG | + | tig0021492:98238-98257 | None:intergenic | 60.0% | |
| GTCTCTGGGTGGGGTGTGTT+TGG | + | tig0021492:98875-98894 | None:intergenic | 60.0% | |
| GGGTTTGTGGACGAAGCGGA+AGG | - | tig0021492:99734-99753 | Msa1392330:intron | 60.0% | |
| CGGAGGATACAGCTGGAGAC+AGG | - | tig0021492:99759-99778 | Msa1392330:intron | 60.0% | |
| CAGCAGTAGCGCGAGGAGAA+AGG | + | tig0021492:99920-99939 | None:intergenic | 60.0% | |
| ! | TGCTGCCGAAGCATTCGGTG+TGG | - | tig0021492:100789-100808 | Msa1392330:intron | 60.0% |
| ! | CCAACCTCTGCAAGGGTGCA+CGG | + | tig0021492:101119-101138 | None:intergenic | 60.0% |
| CCCTTGCAGAGGTTGGAGAC+TGG | - | tig0021492:101123-101142 | Msa1392330:intron | 60.0% | |
| ATGCCCGGCTTAGTCCTGGT+AGG | - | tig0021492:101757-101776 | Msa1392330:CDS | 60.0% | |
| !! | GGTGGTGTTGCACTACGGCT+GGG | + | tig0021492:101882-101901 | Msa1392340:intron | 60.0% |
| AGCCGTAGTGCAACACCACC+CGG | - | tig0021492:101882-101901 | Msa1392330:CDS | 60.0% | |
| CCTGGAAGTGACGGTGATCC+GGG | + | tig0021492:101903-101922 | Msa1392340:intron | 60.0% | |
| TGGTGGCACGGTGGATGTGG+AGG | + | tig0021492:95892-95911 | None:intergenic | 65.0% | |
| GTGTGGAGCTGATGGCTGGG+TGG | + | tig0021492:95938-95957 | None:intergenic | 65.0% | |
| GGACGAAGCGGAAGGTTCGG+AGG | - | tig0021492:99742-99761 | Msa1392330:intron | 65.0% | |
| ACAGCAGCAGCAGTAGCGCG+AGG | + | tig0021492:99927-99946 | None:intergenic | 65.0% | |
| TCCTCCGTGCACCCTTGCAG+AGG | - | tig0021492:101112-101131 | Msa1392330:intron | 65.0% | |
| ! | ACCTCTGCAAGGGTGCACGG+AGG | + | tig0021492:101116-101135 | None:intergenic | 65.0% |
| CCGTGCACCCTTGCAGAGGT+TGG | - | tig0021492:101116-101135 | Msa1392330:intron | 65.0% | |
| !! | GGGTGGTGTTGCACTACGGC+TGG | + | tig0021492:101883-101902 | Msa1392340:intron | 65.0% |
| GGAAGTGACGGTGATCCGGG+TGG | + | tig0021492:101900-101919 | Msa1392340:intron | 65.0% | |
| CCCGGATCACCGTCACTTCC+AGG | - | tig0021492:101900-101919 | Msa1392330:CDS | 65.0% | |
| GGGGATTGCATGGGCCAACC+TGG | + | tig0021492:101921-101940 | Msa1392340:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021492 | gene | 95832 | 101962 | 95832 | ID=Msa1392330;Name=Msa1392330 |
| tig0021492 | mRNA | 95832 | 101962 | 95832 | ID=Msa1392330-mRNA-1;Parent=Msa1392330;Name=Msa1392330-mRNA-1;_AED=0.19;_eAED=0.20;_QI=0|0|0|1|1|1|3|0|498 |
| tig0021492 | exon | 101665 | 101962 | 101665 | ID=Msa1392330-mRNA-1:exon:13134;Parent=Msa1392330-mRNA-1 |
| tig0021492 | exon | 96893 | 97111 | 96893 | ID=Msa1392330-mRNA-1:exon:13133;Parent=Msa1392330-mRNA-1 |
| tig0021492 | exon | 95832 | 96811 | 95832 | ID=Msa1392330-mRNA-1:exon:13132;Parent=Msa1392330-mRNA-1 |
| tig0021492 | CDS | 101665 | 101962 | 101665 | ID=Msa1392330-mRNA-1:cds;Parent=Msa1392330-mRNA-1 |
| tig0021492 | CDS | 96893 | 97111 | 96893 | ID=Msa1392330-mRNA-1:cds;Parent=Msa1392330-mRNA-1 |
| tig0021492 | CDS | 95832 | 96811 | 95832 | ID=Msa1392330-mRNA-1:cds;Parent=Msa1392330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
