Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1119250 | XP_024625148.1 | 92.570 | 323 | 6 | 3 | 1 | 305 | 107 | 429 | 0.0 | 592 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1119250 | sp|Q8RWC5|FLA16_ARATH | 74.691 | 324 | 57 | 6 | 1 | 305 | 109 | 426 | 3.68e-147 | 424 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1119250 | A0A072U3I4 | 92.570 | 323 | 6 | 3 | 1 | 305 | 107 | 429 | 0.0 | 592 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0667070 | Msa1119250 | 0.810239 | 1.272514e-50 | -8.615850e-47 |
| Msa0131050 | Msa1119250 | 0.849166 | 3.849226e-60 | -8.615850e-47 |
| Msa0138390 | Msa1119250 | 0.838551 | 2.688193e-57 | -8.615850e-47 |
| Msa0226940 | Msa1119250 | 0.805479 | 1.308467e-49 | -8.615850e-47 |
| Msa0376450 | Msa1119250 | 0.826403 | 2.765742e-54 | -8.615850e-47 |
| Msa0377320 | Msa1119250 | 0.802379 | 5.770390e-49 | -8.615850e-47 |
| Msa0377970 | Msa1119250 | 0.837017 | 6.659130e-57 | -8.615850e-47 |
| Msa0384530 | Msa1119250 | -0.803555 | 3.296716e-49 | -8.615850e-47 |
| Msa0412190 | Msa1119250 | -0.853254 | 2.697702e-61 | -8.615850e-47 |
| Msa0418430 | Msa1119250 | -0.812088 | 5.053749e-51 | -8.615850e-47 |
| Msa0423460 | Msa1119250 | 0.822884 | 1.865564e-53 | -8.615850e-47 |
| Msa0425120 | Msa1119250 | 0.819138 | 1.359169e-52 | -8.615850e-47 |
| Msa0427620 | Msa1119250 | 0.821673 | 3.562139e-53 | -8.615850e-47 |
| Msa0465800 | Msa1119250 | -0.853709 | 1.997314e-61 | -8.615850e-47 |
| Msa0471720 | Msa1119250 | 0.826667 | 2.391932e-54 | -8.615850e-47 |
| Msa0472740 | Msa1119250 | -0.851724 | 7.364648e-61 | -8.615850e-47 |
| Msa1026800 | Msa1119250 | 0.800214 | 1.601066e-48 | -8.615850e-47 |
| Msa1098180 | Msa1119250 | 0.835674 | 1.462807e-56 | -8.615850e-47 |
| Msa0240450 | Msa1119250 | 0.833391 | 5.477369e-56 | -8.615850e-47 |
| Msa0270030 | Msa1119250 | 0.857880 | 1.206976e-62 | -8.615850e-47 |
| Msa0309650 | Msa1119250 | 0.801389 | 9.215878e-49 | -8.615850e-47 |
| Msa1119250 | Msa1119300 | 0.995594 | 7.415340e-218 | -8.615850e-47 |
| Msa1119250 | Msa1128650 | 0.816094 | 6.601211e-52 | -8.615850e-47 |
| Msa1119250 | Msa1131180 | 0.831185 | 1.926495e-55 | -8.615850e-47 |
| Msa1119250 | Msa1138240 | 0.889059 | 3.397074e-73 | -8.615850e-47 |
| Msa1119250 | Msa1212760 | -0.831546 | 1.569775e-55 | -8.615850e-47 |
| Msa1119250 | Msa1260130 | -0.814833 | 1.259380e-51 | -8.615850e-47 |
| Msa1119250 | Msa1351640 | 0.831370 | 1.734523e-55 | -8.615850e-47 |
| Msa1119250 | Msa1358610 | 0.814957 | 1.182461e-51 | -8.615850e-47 |
| Msa1119250 | Msa1375060 | 0.851267 | 9.919923e-61 | -8.615850e-47 |
| Msa1119250 | Msa1378470 | -0.801237 | 9.898786e-49 | -8.615850e-47 |
| Msa1119250 | Msa1392330 | 0.849892 | 2.415701e-60 | -8.615850e-47 |
| Msa1119250 | Msa1421870 | -0.806988 | 6.296413e-50 | -8.615850e-47 |
| Msa1119250 | Msa1423580 | 0.823017 | 1.736582e-53 | -8.615850e-47 |
| Msa1119250 | Msa1452090 | 0.863553 | 2.293221e-64 | -8.615850e-47 |
| Msa1119250 | Msa1460820 | 0.848392 | 6.312937e-60 | -8.615850e-47 |
| Msa0515310 | Msa1119250 | 0.812584 | 3.939166e-51 | -8.615850e-47 |
| Msa0516510 | Msa1119250 | 0.821980 | 3.026100e-53 | -8.615850e-47 |
| Msa0518130 | Msa1119250 | 0.839160 | 1.871079e-57 | -8.615850e-47 |
| Msa0518750 | Msa1119250 | 0.804272 | 2.339696e-49 | -8.615850e-47 |
| Msa0553950 | Msa1119250 | 0.811749 | 5.991740e-51 | -8.615850e-47 |
| Msa0967650 | Msa1119250 | 0.826572 | 2.521064e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1119250 | MtrunA17_Chr7g0267811 | 92.570 | 323 | 6 | 3 | 1 | 305 | 107 | 429 | 0.0 | 592 |
| Msa1119250 | MtrunA17_Chr4g0025311 | 68.196 | 327 | 82 | 7 | 1 | 305 | 117 | 443 | 5.04e-126 | 368 |
| Msa1119250 | MtrunA17_Chr2g0322251 | 62.195 | 328 | 92 | 9 | 1 | 308 | 104 | 419 | 1.09e-116 | 343 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1119250 | AT2G35860.1 | 74.691 | 324 | 57 | 6 | 1 | 305 | 109 | 426 | 3.74e-148 | 424 |
| Msa1119250 | AT5G06390.1 | 70.031 | 327 | 71 | 7 | 1 | 301 | 117 | 442 | 1.16e-142 | 410 |
| Msa1119250 | AT3G52370.2 | 70.154 | 325 | 65 | 7 | 1 | 305 | 158 | 470 | 1.33e-136 | 396 |
| Msa1119250 | AT3G52370.1 | 70.154 | 325 | 65 | 7 | 1 | 305 | 105 | 417 | 3.37e-136 | 393 |
| Msa1119250 | AT3G11700.1 | 71.287 | 303 | 60 | 7 | 1 | 276 | 114 | 416 | 5.43e-130 | 378 |
| Msa1119250 | AT5G05650.1 | 54.255 | 94 | 28 | 2 | 198 | 280 | 2 | 91 | 1.07e-25 | 99.4 |
Find 110 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATAACGTCGTCTGGTTTA+AGG | 0.220729 | 7_3:+68088568 | None:intergenic |
| CAATGAAATGGCGGATATTC+TGG | 0.243548 | 7_3:-68088220 | Msa1119250:CDS |
| TCTGACGGTTCTGTTAAATT+TGG | 0.246816 | 7_3:-68087937 | Msa1119250:CDS |
| TCTACCTCCGGTGCTCCTTC+TGG | 0.287662 | 7_3:+68088441 | None:intergenic |
| AGGATATGTTCTAACAGTTT+TGG | 0.293643 | 7_3:-68088151 | Msa1119250:CDS |
| TTCGCCATTGCTTCATCATT+TGG | 0.302310 | 7_3:+68088126 | None:intergenic |
| GCGATTGAGTTGCAAGATTT+CGG | 0.337934 | 7_3:-68086094 | Msa1119250:three_prime_UTR |
| CTACCGTCGGTGTAAATATC+AGG | 0.354622 | 7_3:+68087883 | None:intergenic |
| GAGGAGAGTGTCGTATTTGA+AGG | 0.356459 | 7_3:+68085945 | None:intergenic |
| CAAGAATCGCTTCACATCAT+TGG | 0.366577 | 7_3:-68088686 | Msa1119250:CDS |
| AACGTCGTTAGCAACGGAAA+TGG | 0.374579 | 7_3:-68088190 | Msa1119250:CDS |
| GGTGGAGCTCCGGCGGGGAC+TGG | 0.374960 | 7_3:+68088387 | None:intergenic |
| ATCCAAACTCTTCTCCATTA+CGG | 0.376670 | 7_3:-68088249 | Msa1119250:CDS |
| CACCGTAATGGAGAAGAGTT+TGG | 0.378647 | 7_3:+68088247 | None:intergenic |
| GCCTCATAAAGTTGTTGCTC+AGG | 0.394027 | 7_3:-68087962 | Msa1119250:CDS |
| GCTCCGGCGGGGACTGGTGC+GGG | 0.397970 | 7_3:+68088393 | None:intergenic |
| TGATAGTATATAATTTGTTC+CGG | 0.408846 | 7_3:+68088069 | None:intergenic |
| TTTCCGTTGCTAACGACGTT+AGG | 0.410525 | 7_3:+68088193 | None:intergenic |
| ACGTCGTTAGCAACGGAAAT+GGG | 0.422550 | 7_3:-68088189 | Msa1119250:CDS |
| TCCTGAGCAACAACTTTATG+AGG | 0.429700 | 7_3:+68087961 | None:intergenic |
| TCATCTTCATTCTCTTCCTC+CGG | 0.431860 | 7_3:+68087823 | None:intergenic |
| TTTAGCTCCGGTGGGGTTTG+TGG | 0.440481 | 7_3:+68088611 | None:intergenic |
| ATGCCGTGGATGACGCCGTC+TGG | 0.442642 | 7_3:+68088543 | None:intergenic |
| CCGGGACCTGGTGCCGGTGC+TGG | 0.447792 | 7_3:+68088318 | None:intergenic |
| CTCTCCTCCGTTTGATACTC+GGG | 0.454279 | 7_3:+68088039 | None:intergenic |
| ATTAACGACTGATCAATTAT+CGG | 0.461860 | 7_3:-68088103 | Msa1119250:CDS |
| GACGGTAGAATTTCCGTTCA+AGG | 0.464023 | 7_3:-68087868 | Msa1119250:CDS |
| ACTCTCCTCCGTTTGATACT+CGG | 0.469204 | 7_3:+68088038 | None:intergenic |
| GAAAATGAGTTGGAACTTGA+AGG | 0.470046 | 7_3:+68085865 | None:intergenic |
| TGATGTGAAGCGATTCTTGA+AGG | 0.470697 | 7_3:+68088690 | None:intergenic |
| GGTTGGAGAGAGTGTGGTGG+TGG | 0.472921 | 7_3:+68088649 | None:intergenic |
| GGTGCTAATGCGTCGTAGAT+TGG | 0.474334 | 7_3:+68088357 | None:intergenic |
| TGGTAGCACCGGTGGAGCTC+CGG | 0.474961 | 7_3:+68088377 | None:intergenic |
| TTTCATTGTAACCACCGTAA+TGG | 0.480560 | 7_3:+68088235 | None:intergenic |
| TCAAATGTCCATATCAAAGT+TGG | 0.481449 | 7_3:+68085819 | None:intergenic |
| GCCGGTGCTGGTGCTAGTGA+TGG | 0.484785 | 7_3:+68088330 | None:intergenic |
| AAGAATTCAATACCTCTCCT+TGG | 0.486760 | 7_3:+68087745 | None:intergenic |
| GAAATGATGACGTGGACCAC+CGG | 0.488474 | 7_3:+68088299 | None:intergenic |
| TGTCACGGAGGTTTCTTCTC+CGG | 0.489131 | 7_3:+68088478 | None:intergenic |
| TTACGGTGGTTACAATGAAA+TGG | 0.490556 | 7_3:-68088232 | Msa1119250:CDS |
| ATTTCCGTTCAAGGTATTGA+CGG | 0.497370 | 7_3:-68087859 | Msa1119250:CDS |
| AGCACCGGTGGAGCTCCGGC+GGG | 0.497548 | 7_3:+68088381 | None:intergenic |
| AGCTCCGGCGGGGACTGGTG+CGG | 0.498948 | 7_3:+68088392 | None:intergenic |
| TTCTTTAAGCGGTTTGTACG+TGG | 0.506368 | 7_3:+68088417 | None:intergenic |
| GGTTTGTGGTGAGGTGAAGA+CGG | 0.506775 | 7_3:+68088625 | None:intergenic |
| CCGTACAAGAAGATTTCAAC+CGG | 0.510223 | 7_3:-68088497 | Msa1119250:intron |
| AGTCCCCGCCGGAGCTCCAC+CGG | 0.513114 | 7_3:-68088385 | Msa1119250:CDS |
| CTCCGGTGGGGTTTGTGGTG+AGG | 0.517904 | 7_3:+68088616 | None:intergenic |
| ATTTGCCGAAGAAAATGAGT+TGG | 0.518216 | 7_3:+68085855 | None:intergenic |
| ATAATTTGTTCCGGTGCACC+TGG | 0.520254 | 7_3:+68088078 | None:intergenic |
| GGACCACCGGGACCTGGTGC+CGG | 0.522326 | 7_3:+68088312 | None:intergenic |
| TGGTGGTGGAGATGAGTGGC+TGG | 0.525037 | 7_3:+68088663 | None:intergenic |
| TTATCAAGCGTTCGATGCCG+TGG | 0.529305 | 7_3:+68088529 | None:intergenic |
| CCAGCACCGGCACCAGGTCC+CGG | 0.530403 | 7_3:-68088318 | Msa1119250:CDS |
| TCTGGACGGATAACGTCGTC+TGG | 0.535637 | 7_3:+68088561 | None:intergenic |
| ATGGGTCGTTTAGTTTCTGA+AGG | 0.541305 | 7_3:-68088171 | Msa1119250:CDS |
| TAGCACCGGTGGAGCTCCGG+CGG | 0.544331 | 7_3:+68088380 | None:intergenic |
| TCCATCACTAGCACCAGCAC+CGG | 0.545011 | 7_3:-68088331 | Msa1119250:CDS |
| AAATGATGACGTGGACCACC+GGG | 0.547064 | 7_3:+68088300 | None:intergenic |
| TTAGAAGCAACTTTAACAAG+TGG | 0.547256 | 7_3:+68087769 | None:intergenic |
| TTGAGTTGCAAGATTTCGGT+GGG | 0.555248 | 7_3:-68086090 | Msa1119250:three_prime_UTR |
| GGCTCCAAATGATGAAGCAA+TGG | 0.555279 | 7_3:-68088130 | Msa1119250:CDS |
| TTAAAGTTGCTTCTAAACCA+AGG | 0.557248 | 7_3:-68087762 | Msa1119250:CDS |
| TATAATTCCCGAGTATCAAA+CGG | 0.563846 | 7_3:-68088046 | Msa1119250:CDS |
| CTGGTGCGGGTTTCTTTAAG+CGG | 0.564810 | 7_3:+68088406 | None:intergenic |
| TCTTCATTCTCTTCCTCCGG+TGG | 0.568260 | 7_3:+68087826 | None:intergenic |
| TCGTAGATTGGTAGCACCGG+TGG | 0.568473 | 7_3:+68088369 | None:intergenic |
| CACCTCACCACAAACCCCAC+CGG | 0.568513 | 7_3:-68088618 | Msa1119250:CDS |
| TGACGTGGACCACCGGGACC+TGG | 0.568809 | 7_3:+68088306 | None:intergenic |
| ATTATCGGAACCAGGTGCAC+CGG | 0.569501 | 7_3:-68088088 | Msa1119250:CDS |
| GGTGAGGTGAAGACGGTGGT+TGG | 0.574275 | 7_3:+68088632 | None:intergenic |
| TTTGTACGTGGATCTACCTC+CGG | 0.575035 | 7_3:+68088429 | None:intergenic |
| CTAGCACCAGCACCGGCACC+AGG | 0.575040 | 7_3:-68088324 | Msa1119250:CDS |
| TAACCTAACGTCGTTAGCAA+CGG | 0.578368 | 7_3:-68088196 | Msa1119250:CDS |
| ATCTACGACGCATTAGCACC+AGG | 0.579666 | 7_3:-68088354 | Msa1119250:CDS |
| GGTTCTGTTAAATTTGGTCA+CGG | 0.583081 | 7_3:-68087931 | Msa1119250:CDS |
| GAAGAATAGCGGAGATGTCA+CGG | 0.583409 | 7_3:+68088463 | None:intergenic |
| CGTGGATGACGCCGTCTGGA+CGG | 0.584061 | 7_3:+68088547 | None:intergenic |
| CGTCCAGACGGCGTCATCCA+CGG | 0.584160 | 7_3:-68088546 | Msa1119250:CDS |
| ATTGAGTTGCAAGATTTCGG+TGG | 0.589972 | 7_3:-68086091 | Msa1119250:three_prime_UTR |
| GCACCGGTGGAGCTCCGGCG+GGG | 0.590423 | 7_3:+68088382 | None:intergenic |
| AAGGATCTCAGCGGAATCAA+CGG | 0.591246 | 7_3:+68088587 | None:intergenic |
| GACGGTGGTTGGAGAGAGTG+TGG | 0.595155 | 7_3:+68088643 | None:intergenic |
| AATACGACACTCTCCTCTCT+CGG | 0.595722 | 7_3:-68085939 | Msa1119250:three_prime_UTR |
| AACACCGTCAATACCTTGAA+CGG | 0.599863 | 7_3:+68087855 | None:intergenic |
| AAACCCGCACCAGTCCCCGC+CGG | 0.600483 | 7_3:-68088396 | Msa1119250:CDS |
| TATTCTTCCAGAAGGAGCAC+CGG | 0.603132 | 7_3:-68088448 | Msa1119250:CDS |
| TTGTGGTGAGGTGAAGACGG+TGG | 0.605791 | 7_3:+68088628 | None:intergenic |
| GTTGTTGCTCAGGAATCTGA+CGG | 0.606043 | 7_3:-68087952 | Msa1119250:CDS |
| GCGTCGTAGATTGGTAGCAC+CGG | 0.618927 | 7_3:+68088366 | None:intergenic |
| GCTGGTGCTAGTGATGGACC+TGG | 0.620481 | 7_3:+68088336 | None:intergenic |
| ATCTCCGCTATTCTTCCAGA+AGG | 0.624877 | 7_3:-68088456 | Msa1119250:CDS |
| AGTGTGGTGGTGGAGATGAG+TGG | 0.625385 | 7_3:+68088659 | None:intergenic |
| TCTTCCAGAAGGAGCACCGG+AGG | 0.640198 | 7_3:-68088445 | Msa1119250:CDS |
| TGCTCCTTCTGGAAGAATAG+CGG | 0.646470 | 7_3:+68088452 | None:intergenic |
| GGTCCACGTCATCATTTCAA+CGG | 0.650887 | 7_3:-68088294 | Msa1119250:CDS |
| ACTGATCAATTATCGGAACC+AGG | 0.656433 | 7_3:-68088096 | Msa1119250:CDS |
| GTTGCTTCTAAACCAAGGAG+AGG | 0.661362 | 7_3:-68087757 | Msa1119250:intron |
| GATCCTGATATTTACACCGA+CGG | 0.666955 | 7_3:-68087886 | Msa1119250:CDS |
| GGTGGTTGGAGAGAGTGTGG+TGG | 0.670122 | 7_3:+68088646 | None:intergenic |
| TGAGTTGCAAGATTTCGGTG+GGG | 0.674970 | 7_3:-68086089 | Msa1119250:three_prime_UTR |
| CAAACTCTTCTCCATTACGG+TGG | 0.680073 | 7_3:-68088246 | Msa1119250:CDS |
| TTGAACGGAAATTCTACCGT+CGG | 0.682101 | 7_3:+68087870 | None:intergenic |
| CGGTGGTTACAATGAAATGG+CGG | 0.682897 | 7_3:-68088229 | Msa1119250:CDS |
| GACGACGTTATCCGTCCAGA+CGG | 0.685881 | 7_3:-68088558 | Msa1119250:CDS |
| GCACCGGCACCAGGTCCCGG+TGG | 0.687191 | 7_3:-68088315 | Msa1119250:CDS |
| TCGCCGTTGAAATGATGACG+TGG | 0.697402 | 7_3:+68088291 | None:intergenic |
| AATTCCCGAGTATCAAACGG+AGG | 0.728958 | 7_3:-68088043 | Msa1119250:CDS |
| GTCTGGTTTAAGGATCTCAG+CGG | 0.747213 | 7_3:+68088578 | None:intergenic |
| GAATAGCGGAGATGTCACGG+AGG | 0.821146 | 7_3:+68088466 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATATGAAAAATAAAATAAT+GGG | + | chr7_3:68087929-68087948 | None:intergenic | 10.0% |
| !! | TGATATGAAAAATAAAATAA+TGG | + | chr7_3:68087930-68087949 | None:intergenic | 10.0% |
| !!! | GGCTAATTATATTTAATTTT+GGG | - | chr7_3:68087439-68087458 | Msa1119250:intron | 15.0% |
| !!! | TAATTATATTTAATTTTGGG+TGG | - | chr7_3:68087442-68087461 | Msa1119250:intron | 15.0% |
| !!! | AATTATATTTAATTTTGGGT+GGG | - | chr7_3:68087443-68087462 | Msa1119250:intron | 15.0% |
| !! | AAAACATGTTAAATAATCAA+GGG | + | chr7_3:68088047-68088066 | None:intergenic | 15.0% |
| !! | AAAAACATGTTAAATAATCA+AGG | + | chr7_3:68088048-68088067 | None:intergenic | 15.0% |
| !!! | AAATCATTTTCAATACAAAA+AGG | - | chr7_3:68088401-68088420 | Msa1119250:CDS | 15.0% |
| !!! | AATCATTTTCAATACAAAAA+GGG | - | chr7_3:68088402-68088421 | Msa1119250:CDS | 15.0% |
| !!! | TGATAGTATATAATTTGTTC+CGG | + | chr7_3:68086454-68086473 | None:intergenic | 20.0% |
| !!! | TAACCTCATCTTTTTTTTTT+TGG | + | chr7_3:68086893-68086912 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAGATGAGGTTA+AGG | - | chr7_3:68086893-68086912 | Msa1119250:intron | 20.0% |
| !! | GTTGGAAATATATAGAAAAA+TGG | + | chr7_3:68087241-68087260 | None:intergenic | 20.0% |
| !! | AGCAATAATAACTCATTATT+AGG | + | chr7_3:68087315-68087334 | None:intergenic | 20.0% |
| !!! | TTGATTTTTCTTTCTTTCTA+TGG | - | chr7_3:68087396-68087415 | Msa1119250:intron | 20.0% |
| !!! | TGATTTTTCTTTCTTTCTAT+GGG | - | chr7_3:68087397-68087416 | Msa1119250:intron | 20.0% |
| !!! | GGGCTAATTATATTTAATTT+TGG | - | chr7_3:68087438-68087457 | Msa1119250:intron | 20.0% |
| !! | AGTTATATAAACTTGATGAA+TGG | - | chr7_3:68088276-68088295 | Msa1119250:intron | 20.0% |
| !! | TATGGAATAGTATTATTAGT+GGG | + | chr7_3:68088310-68088329 | None:intergenic | 20.0% |
| !! | TTATGGAATAGTATTATTAG+TGG | + | chr7_3:68088311-68088330 | None:intergenic | 20.0% |
| !! | TGAAATAATAAACCAAACAA+TGG | + | chr7_3:68088334-68088353 | None:intergenic | 20.0% |
| !!! | TTTTAAAACCAACTTTGATA+TGG | - | chr7_3:68088693-68088712 | Msa1119250:CDS | 20.0% |
| ! | ATTAACGACTGATCAATTAT+CGG | - | chr7_3:68086417-68086436 | Msa1119250:intron | 25.0% |
| !! | AATTTTCCCAAATCTTCTAA+CGG | + | chr7_3:68086518-68086537 | None:intergenic | 25.0% |
| ! | CTTTATCATAGAAATAGATG+AGG | - | chr7_3:68086856-68086875 | Msa1119250:intron | 25.0% |
| ! | GTACCAAAAAAAAAAAGATG+AGG | - | chr7_3:68086887-68086906 | Msa1119250:intron | 25.0% |
| ! | AATAAAAAATCTCCCTCATT+TGG | - | chr7_3:68087039-68087058 | Msa1119250:intron | 25.0% |
| ! | ATAAAAAATCTCCCTCATTT+GGG | - | chr7_3:68087040-68087059 | Msa1119250:intron | 25.0% |
| ! | GAACTCAAAAATTGTATTGA+GGG | - | chr7_3:68087064-68087083 | Msa1119250:intron | 25.0% |
| !! | TTGATTAACCTTTTACAAAG+TGG | - | chr7_3:68087335-68087354 | Msa1119250:intron | 25.0% |
| !! | TGATTAACCTTTTACAAAGT+GGG | - | chr7_3:68087336-68087355 | Msa1119250:intron | 25.0% |
| ! | AAAAAAACCCACTTTGTAAA+AGG | + | chr7_3:68087346-68087365 | None:intergenic | 25.0% |
| !!! | GGTTTTTTTATTAGTATGTG+TGG | - | chr7_3:68087357-68087376 | Msa1119250:intron | 25.0% |
| ! | AAAGAGCAATTAGATTAAAG+TGG | + | chr7_3:68087605-68087624 | None:intergenic | 25.0% |
| !! | GCATTTAGGTTAAATGAAAA+TGG | + | chr7_3:68088127-68088146 | None:intergenic | 25.0% |
| ! | AATAAACCAAACAATGGTTA+TGG | + | chr7_3:68088328-68088347 | None:intergenic | 25.0% |
| !!! | TTTTGATTCACATACAAACA+GGG | + | chr7_3:68088622-68088641 | None:intergenic | 25.0% |
| !!! | TTTTTGATTCACATACAAAC+AGG | + | chr7_3:68088623-68088642 | None:intergenic | 25.0% |
| ! | AGGATATGTTCTAACAGTTT+TGG | - | chr7_3:68086369-68086388 | Msa1119250:intron | 30.0% |
| TATAATTCCCGAGTATCAAA+CGG | - | chr7_3:68086474-68086493 | Msa1119250:intron | 30.0% | |
| TTAGAAGCAACTTTAACAAG+TGG | + | chr7_3:68086754-68086773 | None:intergenic | 30.0% | |
| TTAAAGTTGCTTCTAAACCA+AGG | - | chr7_3:68086758-68086777 | Msa1119250:intron | 30.0% | |
| TGGAAGAAATAGAAGACATT+GGG | - | chr7_3:68086982-68087001 | Msa1119250:intron | 30.0% | |
| TAAAAAATCTCCCTCATTTG+GGG | - | chr7_3:68087041-68087060 | Msa1119250:intron | 30.0% | |
| GGAACTCAAAAATTGTATTG+AGG | - | chr7_3:68087063-68087082 | Msa1119250:intron | 30.0% | |
| TCAAAAATTGTATTGAGGGA+GGG | - | chr7_3:68087068-68087087 | Msa1119250:intron | 30.0% | |
| !! | CTCATTATTAGGCTTTGTTT+GGG | + | chr7_3:68087304-68087323 | None:intergenic | 30.0% |
| !! | ACTCATTATTAGGCTTTGTT+TGG | + | chr7_3:68087305-68087324 | None:intergenic | 30.0% |
| ATTAGCCCAAACAAGAATAA+AGG | + | chr7_3:68087426-68087445 | None:intergenic | 30.0% | |
| CAACAAATTCAACTAGAGAT+TGG | + | chr7_3:68087577-68087596 | None:intergenic | 30.0% | |
| AAAGAACAAACCCTAGTATT+TGG | + | chr7_3:68087662-68087681 | None:intergenic | 30.0% | |
| TCATTTAACCTAAATGCATG+TGG | - | chr7_3:68088130-68088149 | Msa1119250:CDS | 30.0% | |
| ACTATTCCATAACCATTGTT+TGG | - | chr7_3:68088319-68088338 | Msa1119250:CDS | 30.0% | |
| ! | AAGTTCCAACTCATTTTCTT+CGG | - | chr7_3:68088660-68088679 | Msa1119250:CDS | 30.0% |
| TCAAATGTCCATATCAAAGT+TGG | + | chr7_3:68088704-68088723 | None:intergenic | 30.0% | |
| ATCCAAACTCTTCTCCATTA+CGG | - | chr7_3:68086271-68086290 | Msa1119250:intron | 35.0% | |
| TTTCATTGTAACCACCGTAA+TGG | + | chr7_3:68086288-68086307 | None:intergenic | 35.0% | |
| TTACGGTGGTTACAATGAAA+TGG | - | chr7_3:68086288-68086307 | Msa1119250:intron | 35.0% | |
| TATAACGCCGTTAGAAGATT+TGG | - | chr7_3:68086508-68086527 | Msa1119250:intron | 35.0% | |
| ATAACGCCGTTAGAAGATTT+GGG | - | chr7_3:68086509-68086528 | Msa1119250:intron | 35.0% | |
| TCTGACGGTTCTGTTAAATT+TGG | - | chr7_3:68086583-68086602 | Msa1119250:intron | 35.0% | |
| GGTTCTGTTAAATTTGGTCA+CGG | - | chr7_3:68086589-68086608 | Msa1119250:intron | 35.0% | |
| !! | ATTTCCGTTCAAGGTATTGA+CGG | - | chr7_3:68086661-68086680 | Msa1119250:intron | 35.0% |
| ! | TAACAAGTGGAGTTTTTGCA+CGG | + | chr7_3:68086741-68086760 | None:intergenic | 35.0% |
| AAGAATTCAATACCTCTCCT+TGG | + | chr7_3:68086778-68086797 | None:intergenic | 35.0% | |
| !! | ATGAGGTTAAGGCTTTGTTT+GGG | - | chr7_3:68086904-68086923 | Msa1119250:intron | 35.0% |
| GTGGAAGAAATAGAAGACAT+TGG | - | chr7_3:68086981-68087000 | Msa1119250:intron | 35.0% | |
| AAGAAATAGAAGACATTGGG+AGG | - | chr7_3:68086985-68087004 | Msa1119250:intron | 35.0% | |
| AAAAAATCTCCCTCATTTGG+GGG | - | chr7_3:68087042-68087061 | Msa1119250:intron | 35.0% | |
| CTCAAAAATTGTATTGAGGG+AGG | - | chr7_3:68087067-68087086 | Msa1119250:intron | 35.0% | |
| ! | GGTTGCCTTTATTCTTGTTT+GGG | - | chr7_3:68087418-68087437 | Msa1119250:intron | 35.0% |
| TTTGAGCTTTGCCAAATACT+AGG | - | chr7_3:68087648-68087667 | Msa1119250:intron | 35.0% | |
| TTGAGCTTTGCCAAATACTA+GGG | - | chr7_3:68087649-68087668 | Msa1119250:intron | 35.0% | |
| !! | TGTACTAGTTTGTTGCTTGA+GGG | + | chr7_3:68087764-68087783 | None:intergenic | 35.0% |
| !! | ATGTACTAGTTTGTTGCTTG+AGG | + | chr7_3:68087765-68087784 | None:intergenic | 35.0% |
| AATATGCAATAGAATTGCCG+TGG | - | chr7_3:68088087-68088106 | Msa1119250:CDS | 35.0% | |
| ! | TGGTTAGTCAACTAATACCA+CGG | + | chr7_3:68088107-68088126 | None:intergenic | 35.0% |
| AAAAATAATGCAACCGAGAG+AGG | + | chr7_3:68088597-68088616 | None:intergenic | 35.0% | |
| ! | GAAAATGAGTTGGAACTTGA+AGG | + | chr7_3:68088658-68088677 | None:intergenic | 35.0% |
| ATTTGCCGAAGAAAATGAGT+TGG | + | chr7_3:68088668-68088687 | None:intergenic | 35.0% | |
| TGATGTGAAGCGATTCTTGA+AGG | + | chr7_3:68085833-68085852 | None:intergenic | 40.0% | |
| CAAGAATCGCTTCACATCAT+TGG | - | chr7_3:68085834-68085853 | Msa1119250:three_prime_UTR | 40.0% | |
| AATCTTCTTGTACGGAACGA+GGG | + | chr7_3:68086018-68086037 | None:intergenic | 40.0% | |
| AAATCTTCTTGTACGGAACG+AGG | + | chr7_3:68086019-68086038 | None:intergenic | 40.0% | |
| CCGGTTGAAATCTTCTTGTA+CGG | + | chr7_3:68086026-68086045 | None:intergenic | 40.0% | |
| CCGTACAAGAAGATTTCAAC+CGG | - | chr7_3:68086023-68086042 | Msa1119250:three_prime_UTR | 40.0% | |
| TTCTTTAAGCGGTTTGTACG+TGG | + | chr7_3:68086106-68086125 | None:intergenic | 40.0% | |
| !! | CAATGAAATGGCGGATATTC+TGG | - | chr7_3:68086300-68086319 | Msa1119250:intron | 40.0% |
| TAACCTAACGTCGTTAGCAA+CGG | - | chr7_3:68086324-68086343 | Msa1119250:intron | 40.0% | |
| ! | ATGGGTCGTTTAGTTTCTGA+AGG | - | chr7_3:68086349-68086368 | Msa1119250:intron | 40.0% |
| TTCGCCATTGCTTCATCATT+TGG | + | chr7_3:68086397-68086416 | None:intergenic | 40.0% | |
| ACTGATCAATTATCGGAACC+AGG | - | chr7_3:68086424-68086443 | Msa1119250:intron | 40.0% | |
| TCCTGAGCAACAACTTTATG+AGG | + | chr7_3:68086562-68086581 | None:intergenic | 40.0% | |
| GATCCTGATATTTACACCGA+CGG | - | chr7_3:68086634-68086653 | Msa1119250:intron | 40.0% | |
| TTGAACGGAAATTCTACCGT+CGG | + | chr7_3:68086653-68086672 | None:intergenic | 40.0% | |
| AACACCGTCAATACCTTGAA+CGG | + | chr7_3:68086668-68086687 | None:intergenic | 40.0% | |
| TCATCTTCATTCTCTTCCTC+CGG | + | chr7_3:68086700-68086719 | None:intergenic | 40.0% | |
| !! | GATGAGGTTAAGGCTTTGTT+TGG | - | chr7_3:68086903-68086922 | Msa1119250:intron | 40.0% |
| !! | TAAGGCTTTGTTTGGGAGTT+TGG | - | chr7_3:68086911-68086930 | Msa1119250:intron | 40.0% |
| ! | GAGGGTTTTGCAAAAAAGGA+AGG | - | chr7_3:68086953-68086972 | Msa1119250:intron | 40.0% |
| !!! | TTTTGAGTTCCCCCAAATGA+GGG | + | chr7_3:68087054-68087073 | None:intergenic | 40.0% |
| !!! | TTTTTGAGTTCCCCCAAATG+AGG | + | chr7_3:68087055-68087074 | None:intergenic | 40.0% |
| !! | TTAGGCTTTGTTTGGGAGTT+TGG | + | chr7_3:68087297-68087316 | None:intergenic | 40.0% |
| GGGTTGCCTTTATTCTTGTT+TGG | - | chr7_3:68087417-68087436 | Msa1119250:intron | 40.0% | |
| TAAGAATGTGGTTCACAGCT+TGG | + | chr7_3:68087851-68087870 | None:intergenic | 40.0% | |
| TTAACCTAAATGCATGTGGC+AGG | - | chr7_3:68088134-68088153 | Msa1119250:CDS | 40.0% | |
| TAACCTAAATGCATGTGGCA+GGG | - | chr7_3:68088135-68088154 | Msa1119250:CDS | 40.0% | |
| ! | TGTAGCATGGTTGGATCTTT+TGG | - | chr7_3:68088176-68088195 | Msa1119250:CDS | 40.0% |
| ! | GCGATTGAGTTGCAAGATTT+CGG | - | chr7_3:68088426-68088445 | Msa1119250:CDS | 40.0% |
| ! | ATTGAGTTGCAAGATTTCGG+TGG | - | chr7_3:68088429-68088448 | Msa1119250:CDS | 40.0% |
| ! | TTGAGTTGCAAGATTTCGGT+GGG | - | chr7_3:68088430-68088449 | Msa1119250:CDS | 40.0% |
| !!! | GGAATCAACGGTTTTAGCTC+CGG | + | chr7_3:68085924-68085943 | None:intergenic | 45.0% |
| AAGGATCTCAGCGGAATCAA+CGG | + | chr7_3:68085936-68085955 | None:intergenic | 45.0% | |
| ! | GTCTGGTTTAAGGATCTCAG+CGG | + | chr7_3:68085945-68085964 | None:intergenic | 45.0% |
| ! | GGATAACGTCGTCTGGTTTA+AGG | + | chr7_3:68085955-68085974 | None:intergenic | 45.0% |
| ! | GAAGAATAGCGGAGATGTCA+CGG | + | chr7_3:68086060-68086079 | None:intergenic | 45.0% |
| ATCTCCGCTATTCTTCCAGA+AGG | - | chr7_3:68086064-68086083 | Msa1119250:three_prime_UTR | 45.0% | |
| ! | TGCTCCTTCTGGAAGAATAG+CGG | + | chr7_3:68086071-68086090 | None:intergenic | 45.0% |
| ! | TATTCTTCCAGAAGGAGCAC+CGG | - | chr7_3:68086072-68086091 | Msa1119250:three_prime_UTR | 45.0% |
| TTTGTACGTGGATCTACCTC+CGG | + | chr7_3:68086094-68086113 | None:intergenic | 45.0% | |
| GGTCCACGTCATCATTTCAA+CGG | - | chr7_3:68086226-68086245 | Msa1119250:intron | 45.0% | |
| ! | CACCGTAATGGAGAAGAGTT+TGG | + | chr7_3:68086276-68086295 | None:intergenic | 45.0% |
| CAAACTCTTCTCCATTACGG+TGG | - | chr7_3:68086274-68086293 | Msa1119250:intron | 45.0% | |
| CGGTGGTTACAATGAAATGG+CGG | - | chr7_3:68086291-68086310 | Msa1119250:intron | 45.0% | |
| TTTCCGTTGCTAACGACGTT+AGG | + | chr7_3:68086330-68086349 | None:intergenic | 45.0% | |
| AACGTCGTTAGCAACGGAAA+TGG | - | chr7_3:68086330-68086349 | Msa1119250:intron | 45.0% | |
| ACGTCGTTAGCAACGGAAAT+GGG | - | chr7_3:68086331-68086350 | Msa1119250:intron | 45.0% | |
| GGCTCCAAATGATGAAGCAA+TGG | - | chr7_3:68086390-68086409 | Msa1119250:intron | 45.0% | |
| !! | ATAATTTGTTCCGGTGCACC+TGG | + | chr7_3:68086445-68086464 | None:intergenic | 45.0% |
| AATTCCCGAGTATCAAACGG+AGG | - | chr7_3:68086477-68086496 | Msa1119250:intron | 45.0% | |
| ACTCTCCTCCGTTTGATACT+CGG | + | chr7_3:68086485-68086504 | None:intergenic | 45.0% | |
| GCCTCATAAAGTTGTTGCTC+AGG | - | chr7_3:68086558-68086577 | Msa1119250:intron | 45.0% | |
| GTTGTTGCTCAGGAATCTGA+CGG | - | chr7_3:68086568-68086587 | Msa1119250:intron | 45.0% | |
| CTACCGTCGGTGTAAATATC+AGG | + | chr7_3:68086640-68086659 | None:intergenic | 45.0% | |
| GACGGTAGAATTTCCGTTCA+AGG | - | chr7_3:68086652-68086671 | Msa1119250:intron | 45.0% | |
| GTTGCTTCTAAACCAAGGAG+AGG | - | chr7_3:68086763-68086782 | Msa1119250:intron | 45.0% | |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | - | chr7_3:68086915-68086934 | Msa1119250:intron | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | - | chr7_3:68086916-68086935 | Msa1119250:intron | 45.0% |
| ! | AGGGGAGGGTTTTGCAAAAA+AGG | - | chr7_3:68086949-68086968 | Msa1119250:intron | 45.0% |
| GCAAAAAAGGAAGGAGCAAG+TGG | - | chr7_3:68086962-68086981 | Msa1119250:intron | 45.0% | |
| ATAGAAGACATTGGGAGGAG+AGG | - | chr7_3:68086990-68087009 | Msa1119250:intron | 45.0% | |
| TAGAAGACATTGGGAGGAGA+GGG | - | chr7_3:68086991-68087010 | Msa1119250:intron | 45.0% | |
| ATTGTATTGAGGGAGGGCTT+TGG | - | chr7_3:68087074-68087093 | Msa1119250:intron | 45.0% | |
| TTGTATTGAGGGAGGGCTTT+GGG | - | chr7_3:68087075-68087094 | Msa1119250:intron | 45.0% | |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | + | chr7_3:68086916-68086935 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | + | chr7_3:68086915-68086934 | None:intergenic | 45.0% |
| GCTTGAGGGCAAAGAACATT+AGG | + | chr7_3:68087750-68087769 | None:intergenic | 45.0% | |
| TGGGTGGGGATATAAGAATG+TGG | + | chr7_3:68087863-68087882 | None:intergenic | 45.0% | |
| TTTCCCTGCCACATGCATTT+AGG | + | chr7_3:68088141-68088160 | None:intergenic | 45.0% | |
| ! | GAACTTGCTTGTAGCATGGT+TGG | - | chr7_3:68088167-68088186 | Msa1119250:CDS | 45.0% |
| TGAGTTGCAAGATTTCGGTG+GGG | - | chr7_3:68088431-68088450 | Msa1119250:CDS | 45.0% | |
| !! | GAGGAGAGTGTCGTATTTGA+AGG | + | chr7_3:68088578-68088597 | None:intergenic | 45.0% |
| AATACGACACTCTCCTCTCT+CGG | - | chr7_3:68088581-68088600 | Msa1119250:CDS | 45.0% | |
| GGTTTGTGGTGAGGTGAAGA+CGG | + | chr7_3:68085898-68085917 | None:intergenic | 50.0% | |
| !!! | TCAACGGTTTTAGCTCCGGT+GGG | + | chr7_3:68085920-68085939 | None:intergenic | 50.0% |
| !!! | ATCAACGGTTTTAGCTCCGG+TGG | + | chr7_3:68085921-68085940 | None:intergenic | 50.0% |
| TTATCAAGCGTTCGATGCCG+TGG | + | chr7_3:68085994-68086013 | None:intergenic | 50.0% | |
| TGTCACGGAGGTTTCTTCTC+CGG | + | chr7_3:68086045-68086064 | None:intergenic | 50.0% | |
| CTGGTGCGGGTTTCTTTAAG+CGG | + | chr7_3:68086117-68086136 | None:intergenic | 50.0% | |
| GGTGCTAATGCGTCGTAGAT+TGG | + | chr7_3:68086166-68086185 | None:intergenic | 50.0% | |
| ATCTACGACGCATTAGCACC+AGG | - | chr7_3:68086166-68086185 | Msa1119250:intron | 50.0% | |
| ! | AAATGATGACGTGGACCACC+GGG | + | chr7_3:68086223-68086242 | None:intergenic | 50.0% |
| ! | GAAATGATGACGTGGACCAC+CGG | + | chr7_3:68086224-68086243 | None:intergenic | 50.0% |
| ! | TCGCCGTTGAAATGATGACG+TGG | + | chr7_3:68086232-68086251 | None:intergenic | 50.0% |
| CAACGGCGAACGTCAAGTAA+AGG | - | chr7_3:68086243-68086262 | Msa1119250:intron | 50.0% | |
| ATTATCGGAACCAGGTGCAC+CGG | - | chr7_3:68086432-68086451 | Msa1119250:intron | 50.0% | |
| CTCTCCTCCGTTTGATACTC+GGG | + | chr7_3:68086484-68086503 | None:intergenic | 50.0% | |
| ! | TGACGGTGTTCTTTTGCCAC+CGG | - | chr7_3:68086678-68086697 | Msa1119250:intron | 50.0% |
| TCTTCATTCTCTTCCTCCGG+TGG | + | chr7_3:68086697-68086716 | None:intergenic | 50.0% | |
| ! | GGAGTTTTTGCACGGCGAAT+AGG | + | chr7_3:68086733-68086752 | None:intergenic | 50.0% |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | - | chr7_3:68086914-68086933 | Msa1119250:intron | 50.0% |
| TGTATTGAGGGAGGGCTTTG+GGG | - | chr7_3:68087076-68087095 | Msa1119250:intron | 50.0% | |
| TTTGGGAGTTTGGAGGGGAA+GGG | + | chr7_3:68087287-68087306 | None:intergenic | 50.0% | |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | + | chr7_3:68086914-68086933 | None:intergenic | 50.0% |
| ! | GCTGGAACTTGCTTGTAGCA+TGG | - | chr7_3:68088163-68088182 | Msa1119250:CDS | 50.0% |
| !! | AGTGTGGTGGTGGAGATGAG+TGG | + | chr7_3:68085864-68085883 | None:intergenic | 55.0% |
| TTGTGGTGAGGTGAAGACGG+TGG | + | chr7_3:68085895-68085914 | None:intergenic | 55.0% | |
| ! | TTTAGCTCCGGTGGGGTTTG+TGG | + | chr7_3:68085912-68085931 | None:intergenic | 55.0% |
| !!! | CAACGGTTTTAGCTCCGGTG+GGG | + | chr7_3:68085919-68085938 | None:intergenic | 55.0% |
| TCTGGACGGATAACGTCGTC+TGG | + | chr7_3:68085962-68085981 | None:intergenic | 55.0% | |
| GACGACGTTATCCGTCCAGA+CGG | - | chr7_3:68085962-68085981 | Msa1119250:three_prime_UTR | 55.0% | |
| ! | GAATAGCGGAGATGTCACGG+AGG | + | chr7_3:68086057-68086076 | None:intergenic | 55.0% |
| ! | TCGTAGATTGGTAGCACCGG+TGG | + | chr7_3:68086154-68086173 | None:intergenic | 55.0% |
| ! | GCGTCGTAGATTGGTAGCAC+CGG | + | chr7_3:68086157-68086176 | None:intergenic | 55.0% |
| TCCATCACTAGCACCAGCAC+CGG | - | chr7_3:68086189-68086208 | Msa1119250:intron | 55.0% | |
| TGTTTGGGAGTTTGGAGGGG+AGG | - | chr7_3:68086919-68086938 | Msa1119250:intron | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+GGG | - | chr7_3:68086920-68086939 | Msa1119250:intron | 55.0% | |
| TTTGGGAGTTTGGAGGGGAG+GGG | - | chr7_3:68086921-68086940 | Msa1119250:intron | 55.0% | |
| ACATTGGGAGGAGAGGGCTT+TGG | - | chr7_3:68086997-68087016 | Msa1119250:intron | 55.0% | |
| ! | GTATTGAGGGAGGGCTTTGG+GGG | - | chr7_3:68087077-68087096 | Msa1119250:intron | 55.0% |
| !! | TATTGAGGGAGGGCTTTGGG+GGG | - | chr7_3:68087078-68087097 | Msa1119250:intron | 55.0% |
| GAGTTTGGAGGGGAAGGGAA+GGG | + | chr7_3:68087282-68087301 | None:intergenic | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+AGG | + | chr7_3:68086920-68086939 | None:intergenic | 55.0% | |
| ! | TTCAGCACCGAGGTTAGGGT+GGG | + | chr7_3:68087882-68087901 | None:intergenic | 55.0% |
| ! | TTTCAGCACCGAGGTTAGGG+TGG | + | chr7_3:68087883-68087902 | None:intergenic | 55.0% |
| ! | CCGTTTCAGCACCGAGGTTA+GGG | + | chr7_3:68087886-68087905 | None:intergenic | 55.0% |
| !! | CCCTAACCTCGGTGCTGAAA+CGG | - | chr7_3:68087883-68087902 | Msa1119250:CDS | 55.0% |
| ! | ACCGTTTCAGCACCGAGGTT+AGG | + | chr7_3:68087887-68087906 | None:intergenic | 55.0% |
| GACAAACCGTTTCAGCACCG+AGG | + | chr7_3:68087892-68087911 | None:intergenic | 55.0% | |
| ! | CGGTGCTGAAACGGTTTGTC+TGG | - | chr7_3:68087892-68087911 | Msa1119250:CDS | 55.0% |
| GCATGTGGCAGGGAAATTGC+TGG | - | chr7_3:68088145-68088164 | Msa1119250:CDS | 55.0% | |
| !! | TGGTGGTGGAGATGAGTGGC+TGG | + | chr7_3:68085860-68085879 | None:intergenic | 60.0% |
| ! | GGTTGGAGAGAGTGTGGTGG+TGG | + | chr7_3:68085874-68085893 | None:intergenic | 60.0% |
| ! | GGTGGTTGGAGAGAGTGTGG+TGG | + | chr7_3:68085877-68085896 | None:intergenic | 60.0% |
| GACGGTGGTTGGAGAGAGTG+TGG | + | chr7_3:68085880-68085899 | None:intergenic | 60.0% | |
| GGTGAGGTGAAGACGGTGGT+TGG | + | chr7_3:68085891-68085910 | None:intergenic | 60.0% | |
| CACCTCACCACAAACCCCAC+CGG | - | chr7_3:68085902-68085921 | Msa1119250:three_prime_UTR | 60.0% | |
| !! | TCTTCCAGAAGGAGCACCGG+AGG | - | chr7_3:68086075-68086094 | Msa1119250:three_prime_UTR | 60.0% |
| TCTACCTCCGGTGCTCCTTC+TGG | + | chr7_3:68086082-68086101 | None:intergenic | 60.0% | |
| !! | GCTGGTGCTAGTGATGGACC+TGG | + | chr7_3:68086187-68086206 | None:intergenic | 60.0% |
| ! | CGGTGTTCTTTTGCCACCGG+AGG | - | chr7_3:68086681-68086700 | Msa1119250:intron | 60.0% |
| ! | TTGGGAGGAGAGGGCTTTGG+AGG | - | chr7_3:68087000-68087019 | Msa1119250:intron | 60.0% |
| !! | AGGGCTTTGGGGGGTTATGG+AGG | - | chr7_3:68087087-68087106 | Msa1119250:intron | 60.0% |
| !! | GGGCTTTGGGGGGTTATGGA+GGG | - | chr7_3:68087088-68087107 | Msa1119250:intron | 60.0% |
| ! | AAGGGAAGGGAGGGCTTTGG+GGG | + | chr7_3:68087264-68087283 | None:intergenic | 60.0% |
| GAAGGGAAGGGAGGGCTTTG+GGG | + | chr7_3:68087265-68087284 | None:intergenic | 60.0% | |
| GGAAGGGAAGGGAGGGCTTT+GGG | + | chr7_3:68087266-68087285 | None:intergenic | 60.0% | |
| TGGAGGGGAAGGGAAGGGAA+GGG | + | chr7_3:68087277-68087296 | None:intergenic | 60.0% | |
| TTGGAGGGGAAGGGAAGGGA+AGG | + | chr7_3:68087278-68087297 | None:intergenic | 60.0% | |
| GGAGTTTGGAGGGGAAGGGA+AGG | + | chr7_3:68087283-68087302 | None:intergenic | 60.0% | |
| ATCCCCACCCACCCTAACCT+CGG | - | chr7_3:68087872-68087891 | Msa1119250:CDS | 60.0% | |
| CTCCGGTGGGGTTTGTGGTG+AGG | + | chr7_3:68085907-68085926 | None:intergenic | 65.0% | |
| CGTGGATGACGCCGTCTGGA+CGG | + | chr7_3:68085976-68085995 | None:intergenic | 65.0% | |
| CGTCCAGACGGCGTCATCCA+CGG | - | chr7_3:68085974-68085993 | Msa1119250:three_prime_UTR | 65.0% | |
| ATGCCGTGGATGACGCCGTC+TGG | + | chr7_3:68085980-68085999 | None:intergenic | 65.0% | |
| !! | TGGTAGCACCGGTGGAGCTC+CGG | + | chr7_3:68086146-68086165 | None:intergenic | 65.0% |
| !! | GCCGGTGCTGGTGCTAGTGA+TGG | + | chr7_3:68086193-68086212 | None:intergenic | 65.0% |
| GGAGTTTGGAGGGGAGGGGA+GGG | - | chr7_3:68086925-68086944 | Msa1119250:intron | 65.0% | |
| GAGTTTGGAGGGGAGGGGAG+GGG | - | chr7_3:68086926-68086945 | Msa1119250:intron | 65.0% | |
| !! | GGGAGGGCTTTGGGGGGTTA+TGG | - | chr7_3:68087084-68087103 | Msa1119250:intron | 65.0% |
| !! | AAGGGAGGGCTTTGGGGGGT+TGG | + | chr7_3:68087259-68087278 | None:intergenic | 65.0% |
| !! | AGGGAAGGGAGGGCTTTGGG+GGG | + | chr7_3:68087263-68087282 | None:intergenic | 65.0% |
| GGGAAGGGAAGGGAGGGCTT+TGG | + | chr7_3:68087267-68087286 | None:intergenic | 65.0% | |
| GGGGAAGGGAAGGGAAGGGA+GGG | + | chr7_3:68087273-68087292 | None:intergenic | 65.0% | |
| AGGGGAAGGGAAGGGAAGGG+AGG | + | chr7_3:68087274-68087293 | None:intergenic | 65.0% | |
| CACCGAGGTTAGGGTGGGTG+GGG | + | chr7_3:68087877-68087896 | None:intergenic | 65.0% | |
| GCACCGAGGTTAGGGTGGGT+GGG | + | chr7_3:68087878-68087897 | None:intergenic | 65.0% | |
| ! | AGCACCGAGGTTAGGGTGGG+TGG | + | chr7_3:68087879-68087898 | None:intergenic | 65.0% |
| AAACCCGCACCAGTCCCCGC+CGG | - | chr7_3:68086124-68086143 | Msa1119250:exon | 70.0% | |
| !! | TAGCACCGGTGGAGCTCCGG+CGG | + | chr7_3:68086143-68086162 | None:intergenic | 70.0% |
| !! | CTAGCACCAGCACCGGCACC+AGG | - | chr7_3:68086196-68086215 | Msa1119250:intron | 70.0% |
| TGACGTGGACCACCGGGACC+TGG | + | chr7_3:68086217-68086236 | None:intergenic | 70.0% | |
| GGGAGTTTGGAGGGGAGGGG+AGG | - | chr7_3:68086924-68086943 | Msa1119250:intron | 70.0% | |
| TTTGGAGGGGAGGGGAGGGG+AGG | - | chr7_3:68086929-68086948 | Msa1119250:intron | 70.0% | |
| TTGGAGGGGAGGGGAGGGGA+GGG | - | chr7_3:68086930-68086949 | Msa1119250:intron | 70.0% | |
| ! | AGCTCCGGCGGGGACTGGTG+CGG | + | chr7_3:68086131-68086150 | None:intergenic | 75.0% |
| AGTCCCCGCCGGAGCTCCAC+CGG | - | chr7_3:68086135-68086154 | Msa1119250:intron | 75.0% | |
| !! | AGCACCGGTGGAGCTCCGGC+GGG | + | chr7_3:68086142-68086161 | None:intergenic | 75.0% |
| !! | CCAGCACCGGCACCAGGTCC+CGG | - | chr7_3:68086202-68086221 | Msa1119250:intron | 75.0% |
| GGACCACCGGGACCTGGTGC+CGG | + | chr7_3:68086211-68086230 | None:intergenic | 75.0% | |
| TGGAGGGGAGGGGAGGGGAG+GGG | - | chr7_3:68086931-68086950 | Msa1119250:intron | 75.0% | |
| !! | GCTCCGGCGGGGACTGGTGC+GGG | + | chr7_3:68086130-68086149 | None:intergenic | 80.0% |
| ! | GGTGGAGCTCCGGCGGGGAC+TGG | + | chr7_3:68086136-68086155 | None:intergenic | 80.0% |
| !! | GCACCGGTGGAGCTCCGGCG+GGG | + | chr7_3:68086141-68086160 | None:intergenic | 80.0% |
| !!! | CCGGGACCTGGTGCCGGTGC+TGG | + | chr7_3:68086205-68086224 | None:intergenic | 80.0% |
| !! | GCACCGGCACCAGGTCCCGG+TGG | - | chr7_3:68086205-68086224 | Msa1119250:intron | 80.0% |
| ! | AGGGGAGGGGAGGGGAGGGG+AGG | - | chr7_3:68086934-68086953 | Msa1119250:intron | 80.0% |
| ! | GGGGAGGGGAGGGGAGGGGA+GGG | - | chr7_3:68086935-68086954 | Msa1119250:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 68085815 | 68088727 | 68085815 | ID=Msa1119250;Name=Msa1119250 |
| chr7_3 | mRNA | 68085815 | 68088727 | 68085815 | ID=Msa1119250-mRNA-1;Parent=Msa1119250;Name=Msa1119250-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0|0.2|1|0|0|5|325|308 |
| chr7_3 | exon | 68085815 | 68086150 | 68085815 | ID=Msa1119250-mRNA-1:exon:16965;Parent=Msa1119250-mRNA-1 |
| chr7_3 | exon | 68087758 | 68088002 | 68087758 | ID=Msa1119250-mRNA-1:exon:16964;Parent=Msa1119250-mRNA-1 |
| chr7_3 | exon | 68088036 | 68088277 | 68088036 | ID=Msa1119250-mRNA-1:exon:16963;Parent=Msa1119250-mRNA-1 |
| chr7_3 | exon | 68088284 | 68088507 | 68088284 | ID=Msa1119250-mRNA-1:exon:16962;Parent=Msa1119250-mRNA-1 |
| chr7_3 | exon | 68088523 | 68088727 | 68088523 | ID=Msa1119250-mRNA-1:exon:16961;Parent=Msa1119250-mRNA-1 |
| chr7_3 | CDS | 68088523 | 68088727 | 68088523 | ID=Msa1119250-mRNA-1:cds;Parent=Msa1119250-mRNA-1 |
| chr7_3 | CDS | 68088284 | 68088507 | 68088284 | ID=Msa1119250-mRNA-1:cds;Parent=Msa1119250-mRNA-1 |
| chr7_3 | CDS | 68088036 | 68088277 | 68088036 | ID=Msa1119250-mRNA-1:cds;Parent=Msa1119250-mRNA-1 |
| chr7_3 | CDS | 68087758 | 68088002 | 68087758 | ID=Msa1119250-mRNA-1:cds;Parent=Msa1119250-mRNA-1 |
| chr7_3 | CDS | 68086140 | 68086150 | 68086140 | ID=Msa1119250-mRNA-1:cds;Parent=Msa1119250-mRNA-1 |
| chr7_3 | three_prime_UTR | 68085815 | 68086139 | 68085815 | ID=Msa1119250-mRNA-1:three_prime_utr;Parent=Msa1119250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
