Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1391630 | XP_003610057.2 | 97.488 | 836 | 21 | 0 | 1 | 836 | 1 | 836 | 0.0 | 1679 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1391630 | sp|Q54VM3|TBC5A_DICDI | 26.271 | 472 | 255 | 14 | 38 | 461 | 379 | 805 | 1.61e-38 | 159 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1391630 | G7JUA9 | 97.488 | 836 | 21 | 0 | 1 | 836 | 1 | 836 | 0.0 | 1679 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0054530 | Msa1391630 | 0.800057 | 1.722520e-48 | -8.615850e-47 |
| Msa0054820 | Msa1391630 | 0.814089 | 1.839849e-51 | -8.615850e-47 |
| Msa0064920 | Msa1391630 | 0.812410 | 4.299250e-51 | -8.615850e-47 |
| Msa0076170 | Msa1391630 | 0.803403 | 3.545448e-49 | -8.615850e-47 |
| Msa0089980 | Msa1391630 | 0.806695 | 7.260939e-50 | -8.615850e-47 |
| Msa0090010 | Msa1391630 | 0.804277 | 2.334051e-49 | -8.615850e-47 |
| Msa0106620 | Msa1391630 | 0.805109 | 1.564328e-49 | -8.615850e-47 |
| Msa1349520 | Msa1391630 | 0.805347 | 1.394710e-49 | -8.615850e-47 |
| Msa1365350 | Msa1391630 | 0.958793 | 9.751372e-117 | -8.615850e-47 |
| Msa1366550 | Msa1391630 | 0.848057 | 7.812502e-60 | -8.615850e-47 |
| Msa1376370 | Msa1391630 | 0.957671 | 1.544065e-115 | -8.615850e-47 |
| Msa1391630 | Msa1393820 | 0.801467 | 8.882590e-49 | -8.615850e-47 |
| Msa1391630 | Msa1402400 | 0.821160 | 4.680870e-53 | -8.615850e-47 |
| Msa1391630 | Msa1420250 | 0.816673 | 4.897600e-52 | -8.615850e-47 |
| Msa1391630 | Msa1463030 | 0.859974 | 2.853453e-63 | -8.615850e-47 |
| Msa0651560 | Msa1391630 | 0.804934 | 1.701930e-49 | -8.615850e-47 |
| Msa0689760 | Msa1391630 | 0.819871 | 9.248523e-53 | -8.615850e-47 |
| Msa0691340 | Msa1391630 | 0.833366 | 5.557151e-56 | -8.615850e-47 |
| Msa0716860 | Msa1391630 | 0.814010 | 1.915523e-51 | -8.615850e-47 |
| Msa0752970 | Msa1391630 | 0.813092 | 3.049581e-51 | -8.615850e-47 |
| Msa0758250 | Msa1391630 | 0.816753 | 4.701024e-52 | -8.615850e-47 |
| Msa0789560 | Msa1391630 | 0.814920 | 1.205012e-51 | -8.615850e-47 |
| Msa0834750 | Msa1391630 | 0.807944 | 3.946088e-50 | -8.615850e-47 |
| Msa0124200 | Msa1391630 | 0.803765 | 2.981516e-49 | -8.615850e-47 |
| Msa0124320 | Msa1391630 | 0.831729 | 1.415230e-55 | -8.615850e-47 |
| Msa0143850 | Msa1391630 | 0.817508 | 3.179233e-52 | -8.615850e-47 |
| Msa0168570 | Msa1391630 | 0.817590 | 3.047000e-52 | -8.615850e-47 |
| Msa0171200 | Msa1391630 | 0.806083 | 9.773089e-50 | -8.615850e-47 |
| Msa0183420 | Msa1391630 | 0.805809 | 1.115577e-49 | -8.615850e-47 |
| Msa1240510 | Msa1391630 | 0.801842 | 7.439618e-49 | -8.615850e-47 |
| Msa1257070 | Msa1391630 | 0.806675 | 7.331532e-50 | -8.615850e-47 |
| Msa1265720 | Msa1391630 | 0.954132 | 5.879629e-112 | -8.615850e-47 |
| Msa1333730 | Msa1391630 | 0.825029 | 5.857692e-54 | -8.615850e-47 |
| Msa0379610 | Msa1391630 | 0.823884 | 1.089191e-53 | -8.615850e-47 |
| Msa0389910 | Msa1391630 | 0.837558 | 4.843145e-57 | -8.615850e-47 |
| Msa0395980 | Msa1391630 | 0.803372 | 3.596942e-49 | -8.615850e-47 |
| Msa0423840 | Msa1391630 | 0.838636 | 2.556642e-57 | -8.615850e-47 |
| Msa0432170 | Msa1391630 | 0.831242 | 1.865683e-55 | -8.615850e-47 |
| Msa0473980 | Msa1391630 | 0.828364 | 9.368848e-55 | -8.615850e-47 |
| Msa0476690 | Msa1391630 | 0.818398 | 2.001845e-52 | -8.615850e-47 |
| Msa1041670 | Msa1391630 | 0.823977 | 1.035732e-53 | -8.615850e-47 |
| Msa1081330 | Msa1391630 | 0.802059 | 6.714889e-49 | -8.615850e-47 |
| Msa0249310 | Msa1391630 | 0.811717 | 6.087003e-51 | -8.615850e-47 |
| Msa0251270 | Msa1391630 | 0.803433 | 3.494681e-49 | -8.615850e-47 |
| Msa0280150 | Msa1391630 | 0.826738 | 2.300987e-54 | -8.615850e-47 |
| Msa0287790 | Msa1391630 | 0.817467 | 3.248521e-52 | -8.615850e-47 |
| Msa0347950 | Msa1391630 | 0.806886 | 6.615157e-50 | -8.615850e-47 |
| Msa0347990 | Msa1391630 | 0.815379 | 9.529519e-52 | -8.615850e-47 |
| Msa0363400 | Msa1391630 | 0.805857 | 1.090041e-49 | -8.615850e-47 |
| Msa1166560 | Msa1391630 | 0.821116 | 4.791641e-53 | -8.615850e-47 |
| Msa1177930 | Msa1391630 | 0.802187 | 6.318532e-49 | -8.615850e-47 |
| Msa0521020 | Msa1391630 | 0.837635 | 4.628312e-57 | -8.615850e-47 |
| Msa0899970 | Msa1391630 | 0.802513 | 5.413942e-49 | -8.615850e-47 |
| Msa0932350 | Msa1391630 | 0.817668 | 2.925941e-52 | -8.615850e-47 |
| Msa0969330 | Msa1391630 | 0.812488 | 4.133618e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1391630 | MtrunA17_Chr4g0071861 | 93.571 | 871 | 21 | 1 | 1 | 836 | 1 | 871 | 0.0 | 1664 |
| Msa1391630 | MtrunA17_Chr2g0298651 | 64.318 | 880 | 259 | 11 | 1 | 836 | 1 | 869 | 0.0 | 1053 |
| Msa1391630 | MtrunA17_Chr8g0378291 | 27.381 | 168 | 93 | 5 | 38 | 181 | 123 | 285 | 2.70e-11 | 66.6 |
| Msa1391630 | MtrunA17_Chr3g0121451 | 26.601 | 203 | 111 | 7 | 38 | 209 | 112 | 307 | 2.71e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1391630 | AT4G29950.1 | 53.801 | 855 | 305 | 24 | 32 | 836 | 14 | 828 | 0.0 | 788 |
| Msa1391630 | AT4G29950.3 | 53.129 | 815 | 294 | 23 | 72 | 836 | 44 | 820 | 0.0 | 758 |
| Msa1391630 | AT2G19240.1 | 48.851 | 870 | 330 | 28 | 31 | 836 | 22 | 840 | 0.0 | 686 |
| Msa1391630 | AT2G19240.2 | 49.425 | 870 | 330 | 27 | 31 | 836 | 22 | 845 | 0.0 | 686 |
| Msa1391630 | AT4G29950.2 | 51.147 | 741 | 274 | 23 | 146 | 836 | 1 | 703 | 0.0 | 639 |
| Msa1391630 | AT5G57210.1 | 54.476 | 659 | 268 | 13 | 30 | 671 | 25 | 668 | 0.0 | 617 |
| Msa1391630 | AT5G57210.2 | 51.197 | 543 | 234 | 12 | 146 | 671 | 1 | 529 | 4.66e-153 | 461 |
Find 202 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCTTATTCTCCTGTTGC+TGG | 0.195760 | tig0021440:+107630 | Msa1391630:CDS |
| TGGAAATAGTTGCCATGTTC+TGG | 0.229971 | tig0021440:-106555 | None:intergenic |
| ATGGGAACTTTAAAGAATAT+TGG | 0.231802 | tig0021440:+109055 | Msa1391630:CDS |
| TTTATCAGATAATAGTAAAA+TGG | 0.259709 | tig0021440:+107851 | Msa1391630:CDS |
| TTCCAATGGCTTTGGAAGTT+TGG | 0.270410 | tig0021440:+108869 | Msa1391630:CDS |
| GAAATTCGGCCACACTTTCT+AGG | 0.287597 | tig0021440:+108828 | Msa1391630:CDS |
| AACAATCAAGAGTGGTAAAA+AGG | 0.290842 | tig0021440:+108385 | Msa1391630:CDS |
| GAAAACAATAACAATAAAAT+TGG | 0.295038 | tig0021440:-104611 | None:intergenic |
| CCTGTTGCTGGGTCCCATAC+TGG | 0.298750 | tig0021440:+107642 | Msa1391630:CDS |
| TCTTCCCAGTAGCTATTATC+AGG | 0.301549 | tig0021440:-108227 | None:intergenic |
| TGGAAGTTTGGTCGTAATAA+TGG | 0.314220 | tig0021440:+108881 | Msa1391630:CDS |
| CGTTTATTCGATGATCTTAG+AGG | 0.318032 | tig0021440:+104781 | Msa1391630:CDS |
| ACCACCATTGCATGTGAATC+AGG | 0.320017 | tig0021440:+108176 | Msa1391630:CDS |
| TGCAGTGGCGTATAAATCTT+GGG | 0.329188 | tig0021440:+104806 | Msa1391630:CDS |
| TTAAAGTTCCCATCACATTC+TGG | 0.329403 | tig0021440:-109045 | None:intergenic |
| AAAGCTCGCATTTAAGCAAT+TGG | 0.330967 | tig0021440:+104637 | Msa1391630:five_prime_UTR |
| TGAATAAATTCCAATGGCTT+TGG | 0.340110 | tig0021440:+108861 | Msa1391630:CDS |
| AACACAATGGTCTGTATCTT+AGG | 0.344300 | tig0021440:-107474 | None:intergenic |
| TTCCCTGACCACACTCTTGT+TGG | 0.349187 | tig0021440:-109250 | None:intergenic |
| TGGGAACTTTAAAGAATATT+GGG | 0.350164 | tig0021440:+109056 | Msa1391630:CDS |
| TCATGATATTTGAACTCATT+AGG | 0.352589 | tig0021440:-108650 | None:intergenic |
| TTGGGTCGGTGAACGCTTGC+CGG | 0.362036 | tig0021440:+104656 | Msa1391630:five_prime_UTR |
| GCAGCAGAAGCTTCAATTAC+AGG | 0.367492 | tig0021440:-107672 | None:intergenic |
| ACAAAGGTTAAATTTGTGTT+GGG | 0.368217 | tig0021440:-104521 | None:intergenic |
| GTGTTGCTAAGTGATGCTTA+TGG | 0.369479 | tig0021440:+107492 | Msa1391630:CDS |
| ACTTTGATCGTTATACTTGT+TGG | 0.372163 | tig0021440:-108954 | None:intergenic |
| TGTTGCTAAGTGATGCTTAT+GGG | 0.373836 | tig0021440:+107493 | Msa1391630:CDS |
| TTGACAACCTCTTGATCGTC+TGG | 0.376659 | tig0021440:+107817 | Msa1391630:CDS |
| GTCCATGCTTGAGCATATTC+AGG | 0.378528 | tig0021440:+109081 | Msa1391630:CDS |
| TTATCAGGTAATAAACTCTT+AGG | 0.382184 | tig0021440:-108212 | None:intergenic |
| AATTGCTTAAATGCGAGCTT+TGG | 0.387265 | tig0021440:-104635 | None:intergenic |
| TTGCAGTGGCGTATAAATCT+TGG | 0.390542 | tig0021440:+104805 | Msa1391630:CDS |
| TAATGATTCCACAGGAAATT+CGG | 0.392355 | tig0021440:+108814 | Msa1391630:CDS |
| GTTAAATTTGTGTTGGGGAT+AGG | 0.398179 | tig0021440:-104515 | None:intergenic |
| GTTTAAGTTCTTCAGCACTA+TGG | 0.400618 | tig0021440:-108265 | None:intergenic |
| TTACAGGTGGCAAACCAGTA+TGG | 0.402275 | tig0021440:-107656 | None:intergenic |
| AATCTCCGGCACCATTTCTC+AGG | 0.406744 | tig0021440:+104741 | Msa1391630:CDS |
| GGCAACTATTTCCAGACAAA+AGG | 0.406937 | tig0021440:+106564 | Msa1391630:CDS |
| TTCTTCTGACCCAAGTTCCT+TGG | 0.407632 | tig0021440:-108450 | None:intergenic |
| GGTATTATTTCTTTCTCTGT+TGG | 0.408847 | tig0021440:+104302 | Msa1391630:five_prime_UTR |
| CGGGTTGTCCATGACAAGAT+TGG | 0.408976 | tig0021440:-105644 | None:intergenic |
| GCTTCAATTTGTGTATATAC+CGG | 0.412727 | tig0021440:-104547 | None:intergenic |
| TGAGAATGAAATGAAGAGAA+TGG | 0.415856 | tig0021440:-104423 | None:intergenic |
| GCTGGAGAGGATGGTGGATC+AGG | 0.417731 | tig0021440:+106515 | Msa1391630:CDS |
| CGGCACCATTTCTCAGGAAC+CGG | 0.419436 | tig0021440:+104747 | Msa1391630:CDS |
| CTTTATATGCAGATAGTACA+TGG | 0.422407 | tig0021440:+106469 | Msa1391630:intron |
| GAGAATGAAATGAAGAGAAT+GGG | 0.422653 | tig0021440:-104422 | None:intergenic |
| TATAGCCATCTCGTTGATCT+CGG | 0.425792 | tig0021440:+107732 | Msa1391630:CDS |
| CTCTCCTTTCACAATCAAAA+CGG | 0.426640 | tig0021440:+104339 | Msa1391630:five_prime_UTR |
| CTCTTGATTGTTGACGAAGA+TGG | 0.426953 | tig0021440:-108374 | None:intergenic |
| AGCAACCTATCTCCGGTGGC+AGG | 0.427699 | tig0021440:+108785 | Msa1391630:CDS |
| CTGGGAAGCTTAATAATCTC+TGG | 0.432714 | tig0021440:-108016 | None:intergenic |
| ATAGCCATCTCGTTGATCTC+GGG | 0.436878 | tig0021440:+107733 | Msa1391630:CDS |
| TCTCTTATTCTCCTGTTGCT+GGG | 0.437137 | tig0021440:+107631 | Msa1391630:CDS |
| TTATGGGGTTGAAGGTGAAC+TGG | 0.438731 | tig0021440:+107509 | Msa1391630:CDS |
| GAAGATCTATCCAAGGAACT+TGG | 0.440583 | tig0021440:+108440 | Msa1391630:CDS |
| CGGCACCGGTTCCTGAGAAA+TGG | 0.440993 | tig0021440:-104752 | None:intergenic |
| AATCATGCCACCGGCTCTGT+TGG | 0.445482 | tig0021440:+104681 | Msa1391630:exon |
| GGAAATAGTTGCCATGTTCT+GGG | 0.450619 | tig0021440:-106554 | None:intergenic |
| AATTGAATTGTGTAGGAAGA+AGG | 0.454244 | tig0021440:-104460 | None:intergenic |
| CCAGTATGGGACCCAGCAAC+AGG | 0.457235 | tig0021440:-107642 | None:intergenic |
| TATTACCTGATAATAGCTAC+TGG | 0.465123 | tig0021440:+108222 | Msa1391630:CDS |
| ATTGTGAAAGGAGAGAGAAA+TGG | 0.466316 | tig0021440:-104331 | None:intergenic |
| CTCTCAGGATGATCAGAGAT+TGG | 0.467104 | tig0021440:-108764 | None:intergenic |
| TGTTTGAAGCTTTAATGAAT+GGG | 0.467577 | tig0021440:+107577 | Msa1391630:CDS |
| TGCGCCCTGCCACCGGAGAT+AGG | 0.468340 | tig0021440:-108790 | None:intergenic |
| TCTCCTTTCACAATCAAAAC+GGG | 0.472295 | tig0021440:+104340 | Msa1391630:five_prime_UTR |
| AACAAAGGTTAAATTTGTGT+TGG | 0.472793 | tig0021440:-104522 | None:intergenic |
| GAAATCGGTTCTCACGGAAA+AGG | 0.478306 | tig0021440:+107420 | Msa1391630:CDS |
| GTCTCACAGGAAAGTAGTGT+TGG | 0.483922 | tig0021440:+108677 | Msa1391630:CDS |
| CAAGGCGCTCCACATCAACT+TGG | 0.486995 | tig0021440:-107278 | None:intergenic |
| TACACATGTCGACCATTGTA+AGG | 0.487416 | tig0021440:-109392 | None:intergenic |
| GTGTGGTCAGGGAACTTCAT+TGG | 0.489228 | tig0021440:+109259 | Msa1391630:CDS |
| CTTCAATTTGTGTATATACC+GGG | 0.490332 | tig0021440:-104546 | None:intergenic |
| TCGGTTTCGTCTTTAATCTC+CGG | 0.491898 | tig0021440:+104727 | Msa1391630:CDS |
| TACTGCCATGTCAGCTCTCA+AGG | 0.492107 | tig0021440:+109325 | Msa1391630:CDS |
| GACTTGACGGATGACGAAAT+CGG | 0.492393 | tig0021440:+107405 | Msa1391630:CDS |
| GGGTTGTCCATGACAAGATT+GGG | 0.497183 | tig0021440:-105643 | None:intergenic |
| TTTCCAACAAGAGTGTGGTC+AGG | 0.497315 | tig0021440:+109247 | Msa1391630:CDS |
| TAGTTTGAGAGGGCGGCTCC+TGG | 0.499264 | tig0021440:+105585 | Msa1391630:CDS |
| AGTGATGCTTATGGGGTTGA+AGG | 0.500001 | tig0021440:+107501 | Msa1391630:CDS |
| ATGTTTGAAGCTTTAATGAA+TGG | 0.501384 | tig0021440:+107576 | Msa1391630:CDS |
| CAAATTTAACCTTTGTTCCC+CGG | 0.502781 | tig0021440:+104528 | Msa1391630:five_prime_UTR |
| AAATTTCATTAATTTCATCA+AGG | 0.506660 | tig0021440:-108712 | None:intergenic |
| ACCGGAGATAGGTTGCTCTC+AGG | 0.509000 | tig0021440:-108779 | None:intergenic |
| ATTACGTGGCGATAAATGAT+TGG | 0.509342 | tig0021440:-104389 | None:intergenic |
| TCATTATTGCGCCCTGCCAC+CGG | 0.512914 | tig0021440:-108797 | None:intergenic |
| AAGCTCGCATTTAAGCAATT+GGG | 0.514054 | tig0021440:+104638 | Msa1391630:five_prime_UTR |
| CTACAGAATGATTATCCTGC+TGG | 0.514134 | tig0021440:-108508 | None:intergenic |
| CATTTCTCAGGAACCGGTGC+CGG | 0.515085 | tig0021440:+104753 | Msa1391630:CDS |
| GACCAAACTTCCAAAGCCAT+TGG | 0.515271 | tig0021440:-108871 | None:intergenic |
| TTACCTTCTTCGAGAATTAG+CGG | 0.517058 | tig0021440:-104881 | None:intergenic |
| CGTCTCACATCTCAGACAAA+AGG | 0.517629 | tig0021440:-109367 | None:intergenic |
| GCTTAATAATCTCTGGAGAC+AGG | 0.520951 | tig0021440:-108009 | None:intergenic |
| GCTGAAGAACTTAAACAAGA+TGG | 0.522754 | tig0021440:+108272 | Msa1391630:CDS |
| TCCTGAGAGCAACCTATCTC+CGG | 0.524052 | tig0021440:+108778 | Msa1391630:CDS |
| CAAAGGTTAAATTTGTGTTG+GGG | 0.527465 | tig0021440:-104520 | None:intergenic |
| CAATGCAGAGCTGGAGAGGA+TGG | 0.530243 | tig0021440:+106506 | Msa1391630:CDS |
| AAGATCACCAGCTGTAGAAG+AGG | 0.531139 | tig0021440:-108987 | None:intergenic |
| TCTGACATAAGCAACAATTA+CGG | 0.532883 | tig0021440:+108560 | Msa1391630:CDS |
| TTCACAATGCAGAGCTGGAG+AGG | 0.533828 | tig0021440:+106502 | Msa1391630:CDS |
| GCAACTATTTCCAGACAAAA+GGG | 0.537102 | tig0021440:+106565 | Msa1391630:CDS |
| GTCAGGTATGCTAGTTTGAG+AGG | 0.540089 | tig0021440:+105574 | Msa1391630:intron |
| ATAGCTACTGGGAAGAAAAG+TGG | 0.540693 | tig0021440:+108234 | Msa1391630:CDS |
| TTATGTTCTCCAAGTTGATG+TGG | 0.541208 | tig0021440:+107269 | Msa1391630:CDS |
| GTATCATTTATTGTCGCATG+TGG | 0.542626 | tig0021440:+107698 | Msa1391630:CDS |
| AAGCTCCTTGAGAGCTGACA+TGG | 0.543178 | tig0021440:-109330 | None:intergenic |
| AGTCAAAAGAGAAAAGGAAA+AGG | 0.543578 | tig0021440:+104271 | None:intergenic |
| TTGTTATATTCTACAAGCGC+AGG | 0.545602 | tig0021440:-108122 | None:intergenic |
| AAAAGAGAATTGAATTGTGT+AGG | 0.546698 | tig0021440:-104467 | None:intergenic |
| AATAAACGATTCTCCGGCAC+CGG | 0.546739 | tig0021440:-104766 | None:intergenic |
| TCATGAAACATTATGCCAGC+AGG | 0.547111 | tig0021440:+108493 | Msa1391630:CDS |
| ACCTTGTCTATAACCACACT+CGG | 0.548812 | tig0021440:-106637 | None:intergenic |
| AATTTCATTAATTTCATCAA+GGG | 0.549080 | tig0021440:-108711 | None:intergenic |
| TCATCGAATAAACGATTCTC+CGG | 0.551047 | tig0021440:-104772 | None:intergenic |
| TACAGGTGGCAAACCAGTAT+GGG | 0.551405 | tig0021440:-107655 | None:intergenic |
| TTCCAACAAGAGTGTGGTCA+GGG | 0.551719 | tig0021440:+109248 | Msa1391630:CDS |
| GAAGAAGATATAGAAAATCT+CGG | 0.552372 | tig0021440:+108467 | Msa1391630:CDS |
| GAAGTTGAAGATGAAGAAGA+TGG | 0.552384 | tig0021440:-104835 | None:intergenic |
| GGATGATCAGAGATTGGAAG+AGG | 0.553620 | tig0021440:-108758 | None:intergenic |
| ATATCATGAAAATGTCTCAC+AGG | 0.553655 | tig0021440:+108664 | Msa1391630:CDS |
| ACAGCTTCCTCTTCTACAGC+TGG | 0.554308 | tig0021440:+108980 | Msa1391630:CDS |
| GCTTTAATGAATGGGGCTCA+CGG | 0.557113 | tig0021440:+107585 | Msa1391630:CDS |
| GAGGCAGAGCAACAAGATGA+TGG | 0.560054 | tig0021440:+108536 | Msa1391630:CDS |
| GATTGGAAGAGGTGAATCGA+TGG | 0.561413 | tig0021440:-108747 | None:intergenic |
| TCTCACAGGAAAGTAGTGTT+GGG | 0.563238 | tig0021440:+108678 | Msa1391630:CDS |
| ACTTTCATCCTTTGTAACGT+GGG | 0.565238 | tig0021440:-105614 | None:intergenic |
| AAATCCGTCTCAATATGCCT+TGG | 0.567226 | tig0021440:-106590 | None:intergenic |
| GGGCGCAATAATGATTCCAC+AGG | 0.567344 | tig0021440:+108806 | Msa1391630:CDS |
| TTCTACAAGCGCAGGTGTCG+AGG | 0.567649 | tig0021440:-108114 | None:intergenic |
| CACAGTACTTTGCTCTACGC+TGG | 0.568902 | tig0021440:+107763 | Msa1391630:CDS |
| TGAATTGTGTAGGAAGAAGG+AGG | 0.569025 | tig0021440:-104457 | None:intergenic |
| GTTTGAAGCTTTAATGAATG+GGG | 0.569176 | tig0021440:+107578 | Msa1391630:CDS |
| ACTCATTAGGAGAACTAGCT+AGG | 0.569589 | tig0021440:-108637 | None:intergenic |
| GGCTCACGGTTCAGTTGCAA+TGG | 0.571038 | tig0021440:+107599 | Msa1391630:CDS |
| TAATCATTCTGTAGCAGTTG+AGG | 0.571250 | tig0021440:+108517 | Msa1391630:CDS |
| TTCCAGACAAAAGGGTGCCA+AGG | 0.572383 | tig0021440:+106573 | Msa1391630:CDS |
| TATGGGGTTGAAGGTGAACT+GGG | 0.574976 | tig0021440:+107510 | Msa1391630:CDS |
| AAGATCTATCCAAGGAACTT+GGG | 0.576219 | tig0021440:+108441 | Msa1391630:CDS |
| CCCGAGTGTGGTTATAGACA+AGG | 0.580071 | tig0021440:+106636 | Msa1391630:CDS |
| CGGTTCCTGAGAAATGGTGC+CGG | 0.583182 | tig0021440:-104746 | None:intergenic |
| AGGATCTTTCATTCATCTCG+CGG | 0.583363 | tig0021440:+107909 | Msa1391630:CDS |
| TTGTAACGTGGGGATCAACC+AGG | 0.583633 | tig0021440:-105603 | None:intergenic |
| GTTGCTAAGTGATGCTTATG+GGG | 0.585951 | tig0021440:+107494 | Msa1391630:CDS |
| TACTTTCATCCTTTGTAACG+TGG | 0.587230 | tig0021440:-105615 | None:intergenic |
| TAGCCATCTCGTTGATCTCG+GGG | 0.587269 | tig0021440:+107734 | Msa1391630:CDS |
| CCACCGCTAATTCTCGAAGA+AGG | 0.589225 | tig0021440:+104878 | Msa1391630:CDS |
| TTGCCGGAAAATCATGCCAC+CGG | 0.589609 | tig0021440:+104672 | Msa1391630:exon |
| GGCGGATCCAACAGAGCCGG+TGG | 0.589682 | tig0021440:-104688 | None:intergenic |
| GGTTGATCCCCACGTTACAA+AGG | 0.589815 | tig0021440:+105606 | Msa1391630:CDS |
| TTTATATGCAGATAGTACAT+GGG | 0.590854 | tig0021440:+106470 | Msa1391630:intron |
| TGACAACCTCTTGATCGTCT+GGG | 0.594198 | tig0021440:+107818 | Msa1391630:CDS |
| TAAAACTGAATAAATTCCAA+TGG | 0.598877 | tig0021440:+108855 | Msa1391630:CDS |
| ATTACCTGATAATAGCTACT+GGG | 0.602058 | tig0021440:+108223 | Msa1391630:CDS |
| TTCTGCTGACCAGAATGTGA+TGG | 0.603860 | tig0021440:+109036 | Msa1391630:CDS |
| GTGTATATACCGGGGAACAA+AGG | 0.605547 | tig0021440:-104537 | None:intergenic |
| ACTTAATGCAAGAGTCTGCA+AGG | 0.606324 | tig0021440:-108078 | None:intergenic |
| TTTCATCCCAGACGATCAAG+AGG | 0.607164 | tig0021440:-107824 | None:intergenic |
| AATGGCGGATCCAACAGAGC+CGG | 0.608631 | tig0021440:-104691 | None:intergenic |
| CTTTCATCCTTTGTAACGTG+GGG | 0.608769 | tig0021440:-105613 | None:intergenic |
| TAGTTCACCCAATCTTGTCA+TGG | 0.608857 | tig0021440:+105636 | Msa1391630:CDS |
| ATTGGAAGAGGTGAATCGAT+GGG | 0.609774 | tig0021440:-108746 | None:intergenic |
| GAAAAGAGTACTTGCTTCTG+AGG | 0.610033 | tig0021440:+108919 | Msa1391630:CDS |
| TGCAGAGCTGGAGAGGATGG+TGG | 0.616704 | tig0021440:+106509 | Msa1391630:CDS |
| TTTGTTAGAAGATCTATCCA+AGG | 0.617410 | tig0021440:+108433 | Msa1391630:CDS |
| TCACGTTTATACCCAGAACA+TGG | 0.622550 | tig0021440:+106543 | Msa1391630:CDS |
| ATGATCTTAGAGGTTTGCAG+TGG | 0.624245 | tig0021440:+104791 | Msa1391630:CDS |
| TCAGGTATGCTAGTTTGAGA+GGG | 0.624547 | tig0021440:+105575 | Msa1391630:intron |
| AGAATGAAATGAAGAGAATG+GGG | 0.624923 | tig0021440:-104421 | None:intergenic |
| ACTTGGAGAACATAAAGCAA+AGG | 0.628302 | tig0021440:-107261 | None:intergenic |
| TTCAATTTGTGTATATACCG+GGG | 0.630929 | tig0021440:-104545 | None:intergenic |
| GCAGTGGCGTATAAATCTTG+GGG | 0.633132 | tig0021440:+104807 | Msa1391630:CDS |
| TACCTGAATATGCTCAAGCA+TGG | 0.637984 | tig0021440:-109083 | None:intergenic |
| CAACCCCGAGATCAACGAGA+TGG | 0.640135 | tig0021440:-107737 | None:intergenic |
| GGTATGCTAGTTTGAGAGGG+CGG | 0.644507 | tig0021440:+105578 | Msa1391630:intron |
| TCTGCTGACCAGAATGTGAT+GGG | 0.647152 | tig0021440:+109037 | Msa1391630:CDS |
| GATGACGAAATCGGTTCTCA+CGG | 0.647201 | tig0021440:+107414 | Msa1391630:CDS |
| TGAACCTGATTCACATGCAA+TGG | 0.648752 | tig0021440:-108180 | None:intergenic |
| AATCTCTGGAGACAGGTCGT+AGG | 0.651148 | tig0021440:-108002 | None:intergenic |
| TAAAATGGAAAAGCATGCAG+AGG | 0.651374 | tig0021440:+107866 | Msa1391630:CDS |
| GGTGCCAAGGCATATTGAGA+CGG | 0.652499 | tig0021440:+106586 | Msa1391630:CDS |
| ATTTATCTCAGCTATTGCTG+TGG | 0.655369 | tig0021440:+107935 | Msa1391630:CDS |
| CTTGTAGAATATAACAACAA+GGG | 0.657239 | tig0021440:+108128 | Msa1391630:CDS |
| CCTTGTCTATAACCACACTC+GGG | 0.658075 | tig0021440:-106636 | None:intergenic |
| GCTTGTAGAATATAACAACA+AGG | 0.658953 | tig0021440:+108127 | Msa1391630:CDS |
| ACCTGATTCACATGCAATGG+TGG | 0.659619 | tig0021440:-108177 | None:intergenic |
| TCTGCTTTCCAACAAGAGTG+TGG | 0.661245 | tig0021440:+109242 | Msa1391630:CDS |
| AGATGTCTTAGCAGAAACAC+CGG | 0.661553 | tig0021440:+108593 | Msa1391630:CDS |
| GGCACGACGAAGATCATCAA+CGG | 0.661655 | tig0021440:-104857 | None:intergenic |
| AAGTGTGGCCGAATTTCCTG+TGG | 0.661701 | tig0021440:-108822 | None:intergenic |
| TGAGAGCAACCTATCTCCGG+TGG | 0.662239 | tig0021440:+108781 | Msa1391630:CDS |
| TCTTCGTCAACAATCAAGAG+TGG | 0.663979 | tig0021440:+108377 | Msa1391630:CDS |
| TGTCTTAGACATCCCGAGTG+TGG | 0.664217 | tig0021440:+106624 | Msa1391630:CDS |
| TCGCATTTAAGCAATTGGGT+CGG | 0.664302 | tig0021440:+104642 | Msa1391630:five_prime_UTR |
| TTATATGCAGATAGTACATG+GGG | 0.672097 | tig0021440:+106471 | Msa1391630:intron |
| GCAGAAGCTTCAATTACAGG+TGG | 0.678657 | tig0021440:-107669 | None:intergenic |
| ATGTGAGACGAACCTTACAA+TGG | 0.686558 | tig0021440:+109380 | Msa1391630:exon |
| AGCATCACTTAGCAACACAA+TGG | 0.690065 | tig0021440:-107487 | None:intergenic |
| CCTTCTTCGAGAATTAGCGG+TGG | 0.702456 | tig0021440:-104878 | None:intergenic |
| TAGCAGAAACACCGGCAGCG+AGG | 0.719930 | tig0021440:+108601 | Msa1391630:CDS |
| CAGCGTAGAGCAAAGTACTG+TGG | 0.720652 | tig0021440:-107762 | None:intergenic |
| GAATGAAATGAAGAGAATGG+GGG | 0.751138 | tig0021440:-104420 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAACAATAACAATAAAAT+TGG | - | tig0021440:104614-104633 | None:intergenic | 15.0% |
| !!! | TGTTTTTGTTTTTTTATGAT+TGG | + | tig0021440:105143-105162 | Msa1391630:intron | 15.0% |
| !!! | ATCAATATCATTTTATATCA+AGG | + | tig0021440:105302-105321 | Msa1391630:intron | 15.0% |
| !! | GTAGAAATAAATATATAATC+TGG | - | tig0021440:105894-105913 | None:intergenic | 15.0% |
| !! | ACATAGTTTGATATAAATTA+TGG | - | tig0021440:105927-105946 | None:intergenic | 15.0% |
| !! | TTTAGTTAACTAGTAAAAAA+CGG | + | tig0021440:106863-106882 | Msa1391630:intron | 15.0% |
| !!! | TTTTGTCATATAATCTTTAA+TGG | + | tig0021440:106956-106975 | Msa1391630:intron | 15.0% |
| !!! | TTTTATTCATACAGATAATA+TGG | - | tig0021440:107017-107036 | None:intergenic | 15.0% |
| !!! | CTTCTTTTTATTTATTTTGT+AGG | + | tig0021440:107219-107238 | Msa1391630:intron | 15.0% |
| !! | TTTATCAGATAATAGTAAAA+TGG | + | tig0021440:107851-107870 | Msa1391630:CDS | 15.0% |
| !! | AATTTCATTAATTTCATCAA+GGG | - | tig0021440:108714-108733 | None:intergenic | 15.0% |
| !! | AAATTTCATTAATTTCATCA+AGG | - | tig0021440:108715-108734 | None:intergenic | 15.0% |
| !! | ACTAAAATTTAAAAACAAGT+TGG | + | tig0021440:109124-109143 | Msa1391630:intron | 15.0% |
| !! | AGGTAAAAATTGAAGATTTA+AGG | - | tig0021440:104498-104517 | None:intergenic | 20.0% |
| !! | AATTTACATCCTTCTATAAT+TGG | - | tig0021440:104952-104971 | None:intergenic | 20.0% |
| !! | TTAAAACATGTGAGAAAAAA+TGG | - | tig0021440:104979-104998 | None:intergenic | 20.0% |
| !!! | ACATGTTTTAATCCAATTTA+TGG | + | tig0021440:104988-105007 | Msa1391630:intron | 20.0% |
| !! | TTAATCCAATTTATGGTATT+TGG | + | tig0021440:104995-105014 | Msa1391630:intron | 20.0% |
| !! | ATTATCCAAATACCATAAAT+TGG | - | tig0021440:105003-105022 | None:intergenic | 20.0% |
| !!! | TAGAAATTTGTTTTTCCATT+TGG | + | tig0021440:105352-105371 | Msa1391630:intron | 20.0% |
| !!! | AGAAATTTGTTTTTCCATTT+GGG | + | tig0021440:105353-105372 | Msa1391630:intron | 20.0% |
| !!! | ATCCAATTGCATTTTATTTT+TGG | + | tig0021440:105508-105527 | Msa1391630:intron | 20.0% |
| !! | ATCCAAAAATAAAATGCAAT+TGG | - | tig0021440:105513-105532 | None:intergenic | 20.0% |
| !! | AAAATTTGCAATGATTTACT+TGG | - | tig0021440:105682-105701 | None:intergenic | 20.0% |
| !! | GAAAATAAATAGATGGATAA+TGG | - | tig0021440:105869-105888 | None:intergenic | 20.0% |
| !! | TTGATATAAATTATGGAAGT+TGG | - | tig0021440:105920-105939 | None:intergenic | 20.0% |
| !! | TTTATATCAAACTATGTTTC+CGG | + | tig0021440:105930-105949 | Msa1391630:intron | 20.0% |
| !! | TAATAGAAGATAAGAAACTA+AGG | + | tig0021440:106060-106079 | Msa1391630:intron | 20.0% |
| !! | AATAGAAGATAAGAAACTAA+GGG | + | tig0021440:106061-106080 | Msa1391630:intron | 20.0% |
| !! | AAAATGAAAACTGAAAACAT+TGG | - | tig0021440:106097-106116 | None:intergenic | 20.0% |
| !!! | ACATTAAATGATTAACTTGT+TGG | + | tig0021440:107083-107102 | Msa1391630:intron | 20.0% |
| !! | CATAACATAAACAAGTTATA+CGG | - | tig0021440:107160-107179 | None:intergenic | 20.0% |
| !! | TAAAACTGAATAAATTCCAA+TGG | + | tig0021440:108855-108874 | Msa1391630:CDS | 20.0% |
| ! | AAAAGAGAATTGAATTGTGT+AGG | - | tig0021440:104470-104489 | None:intergenic | 25.0% |
| ! | ACAAAGGTTAAATTTGTGTT+GGG | - | tig0021440:104524-104543 | None:intergenic | 25.0% |
| ! | AACAAAGGTTAAATTTGTGT+TGG | - | tig0021440:104525-104544 | None:intergenic | 25.0% |
| !! | AAGCTTTTCGTTTCATTTTA+TGG | + | tig0021440:104566-104585 | Msa1391630:five_prime_UTR | 25.0% |
| ! | ATCAAAACAAAGACACTATA+AGG | - | tig0021440:104929-104948 | None:intergenic | 25.0% |
| !!! | TGTTTTGATCCAATTATAGA+AGG | + | tig0021440:104940-104959 | Msa1391630:intron | 25.0% |
| ! | GATAATGAGTTAATAGAACT+TGG | + | tig0021440:105460-105479 | Msa1391630:intron | 25.0% |
| ! | ATTTATCCAGATGACATAAT+GGG | - | tig0021440:105710-105729 | None:intergenic | 25.0% |
| ! | ATAAATCTATTTCCAGCATT+TGG | + | tig0021440:105724-105743 | Msa1391630:intron | 25.0% |
| ! | ACTGAGTAAATAGGAATTTA+TGG | - | tig0021440:105761-105780 | None:intergenic | 25.0% |
| !! | AATAAATAGATGGATAATGG+AGG | - | tig0021440:105866-105885 | None:intergenic | 25.0% |
| ! | TTATATCAAACTATGTTTCC+GGG | + | tig0021440:105931-105950 | Msa1391630:intron | 25.0% |
| ! | AAGGTTAAGCTAAACAATAA+TGG | + | tig0021440:106004-106023 | Msa1391630:intron | 25.0% |
| ! | ATAGAAGATAAGAAACTAAG+GGG | + | tig0021440:106062-106081 | Msa1391630:intron | 25.0% |
| !!! | GCTAGATTTGTTTTCAAAAA+CGG | - | tig0021440:106167-106186 | None:intergenic | 25.0% |
| !! | GCATTTTCAGAAATTTTGAA+AGG | + | tig0021440:106185-106204 | Msa1391630:intron | 25.0% |
| !!! | TTCGTTTTAAATTGCTAACA+AGG | - | tig0021440:106308-106327 | None:intergenic | 25.0% |
| ! | TTTATATGCAGATAGTACAT+GGG | + | tig0021440:106470-106489 | Msa1391630:intron | 25.0% |
| !!! | TGAGACGGATTTTATTATTA+TGG | + | tig0021440:106601-106620 | Msa1391630:CDS | 25.0% |
| !!! | ATTTACTTTTCCTTCTAACT+CGG | + | tig0021440:106737-106756 | Msa1391630:intron | 25.0% |
| ! | ACTAAAGCTTTCATTCAATT+AGG | - | tig0021440:106849-106868 | None:intergenic | 25.0% |
| ! | TTCATAATTCATCAAGTATC+AGG | - | tig0021440:107113-107132 | None:intergenic | 25.0% |
| ! | AAAAAGAAGCTCATTAATGT+TGG | - | tig0021440:107208-107227 | None:intergenic | 25.0% |
| ! | TAAAAAATCTTCAGACTTGA+CGG | + | tig0021440:107392-107411 | Msa1391630:CDS | 25.0% |
| !! | ATGTTTGAAGCTTTAATGAA+TGG | + | tig0021440:107576-107595 | Msa1391630:CDS | 25.0% |
| !! | TGTTTGAAGCTTTAATGAAT+GGG | + | tig0021440:107577-107596 | Msa1391630:CDS | 25.0% |
| !! | TTTTAATGTTTGTGTTCTCT+GGG | - | tig0021440:108037-108056 | None:intergenic | 25.0% |
| !! | TTTTTAATGTTTGTGTTCTC+TGG | - | tig0021440:108038-108057 | None:intergenic | 25.0% |
| ! | CTTGTAGAATATAACAACAA+GGG | + | tig0021440:108128-108147 | Msa1391630:CDS | 25.0% |
| !! | AATAAACTCTTAGGAGTTTT+TGG | - | tig0021440:108206-108225 | None:intergenic | 25.0% |
| ! | TTATCAGGTAATAAACTCTT+AGG | - | tig0021440:108215-108234 | None:intergenic | 25.0% |
| ! | GAAGAAGATATAGAAAATCT+CGG | + | tig0021440:108467-108486 | Msa1391630:CDS | 25.0% |
| ! | TCATGATATTTGAACTCATT+AGG | - | tig0021440:108653-108672 | None:intergenic | 25.0% |
| !! | TTTTATATTCCTAGAAAGTG+TGG | - | tig0021440:108840-108859 | None:intergenic | 25.0% |
| !! | TGCAGTACTGTTAATTTTAA+TGG | + | tig0021440:109010-109029 | Msa1391630:CDS | 25.0% |
| !! | ATGGGAACTTTAAAGAATAT+TGG | + | tig0021440:109055-109074 | Msa1391630:CDS | 25.0% |
| !! | TGGGAACTTTAAAGAATATT+GGG | + | tig0021440:109056-109075 | Msa1391630:CDS | 25.0% |
| !! | TAGTACGTCTAAAAATGTTT+TGG | + | tig0021440:109286-109305 | Msa1391630:CDS | 25.0% |
| ! | GGTATTATTTCTTTCTCTGT+TGG | + | tig0021440:104302-104321 | Msa1391630:five_prime_UTR | 30.0% |
| AGAATGAAATGAAGAGAATG+GGG | - | tig0021440:104424-104443 | None:intergenic | 30.0% | |
| GAGAATGAAATGAAGAGAAT+GGG | - | tig0021440:104425-104444 | None:intergenic | 30.0% | |
| TGAGAATGAAATGAAGAGAA+TGG | - | tig0021440:104426-104445 | None:intergenic | 30.0% | |
| AATTGAATTGTGTAGGAAGA+AGG | - | tig0021440:104463-104482 | None:intergenic | 30.0% | |
| CAAAGGTTAAATTTGTGTTG+GGG | - | tig0021440:104523-104542 | None:intergenic | 30.0% | |
| TTCAATTTGTGTATATACCG+GGG | - | tig0021440:104548-104567 | None:intergenic | 30.0% | |
| CTTCAATTTGTGTATATACC+GGG | - | tig0021440:104549-104568 | None:intergenic | 30.0% | |
| GCTTCAATTTGTGTATATAC+CGG | - | tig0021440:104550-104569 | None:intergenic | 30.0% | |
| !! | AAAGTTCAGAGCTTTATTGA+TGG | + | tig0021440:105044-105063 | Msa1391630:intron | 30.0% |
| !! | AAGTTCAGAGCTTTATTGAT+GGG | + | tig0021440:105045-105064 | Msa1391630:intron | 30.0% |
| TTGTTTCGATCGTATAGATT+TGG | + | tig0021440:105389-105408 | Msa1391630:intron | 30.0% | |
| TGTTTCGATCGTATAGATTT+GGG | + | tig0021440:105390-105409 | Msa1391630:intron | 30.0% | |
| TAACTCATTATCTCTCAAGA+TGG | - | tig0021440:105452-105471 | None:intergenic | 30.0% | |
| ! | TTAATGTTTCTAATCCTGTC+AGG | + | tig0021440:105557-105576 | Msa1391630:intron | 30.0% |
| ! | TTACTTGGATTTTGTGAAAG+CGG | - | tig0021440:105667-105686 | None:intergenic | 30.0% |
| TTTATCCAGATGACATAATG+GGG | - | tig0021440:105709-105728 | None:intergenic | 30.0% | |
| GATTTATCCAGATGACATAA+TGG | - | tig0021440:105711-105730 | None:intergenic | 30.0% | |
| AGGAATTTATGGCAGTATAA+CGG | - | tig0021440:105750-105769 | None:intergenic | 30.0% | |
| TTGCTCTATACTGAGTAAAT+AGG | - | tig0021440:105770-105789 | None:intergenic | 30.0% | |
| TCTGGTCGAAAATAAATAGA+TGG | - | tig0021440:105876-105895 | None:intergenic | 30.0% | |
| !! | ATTTGTTTTCAAAAACGGTG+AGG | - | tig0021440:106162-106181 | None:intergenic | 30.0% |
| CAATTATGATAGAGAGAAGA+TGG | - | tig0021440:106262-106281 | None:intergenic | 30.0% | |
| TTAAATTGCTAACAAGGAGA+TGG | - | tig0021440:106302-106321 | None:intergenic | 30.0% | |
| ! | ATGTTTTCAGAAAGTAAACG+CGG | + | tig0021440:106354-106373 | Msa1391630:intron | 30.0% |
| CTTTATATGCAGATAGTACA+TGG | + | tig0021440:106469-106488 | Msa1391630:intron | 30.0% | |
| TTATATGCAGATAGTACATG+GGG | + | tig0021440:106471-106490 | Msa1391630:intron | 30.0% | |
| TAAATACGTTTGCTCACTTT+GGG | + | tig0021440:106709-106728 | Msa1391630:intron | 30.0% | |
| AATTATGAACTGCCTTTCTT+GGG | + | tig0021440:107124-107143 | Msa1391630:intron | 30.0% | |
| TAAACAAGTTATACGGAATC+TGG | - | tig0021440:107153-107172 | None:intergenic | 30.0% | |
| ! | CATTTTACAGACAGATTTGA+TGG | + | tig0021440:107327-107346 | Msa1391630:CDS | 30.0% |
| ! | GTTTGAAGCTTTAATGAATG+GGG | + | tig0021440:107578-107597 | Msa1391630:CDS | 30.0% |
| GCTTGTAGAATATAACAACA+AGG | + | tig0021440:108127-108146 | Msa1391630:CDS | 30.0% | |
| TATTACCTGATAATAGCTAC+TGG | + | tig0021440:108222-108241 | Msa1391630:CDS | 30.0% | |
| ATTACCTGATAATAGCTACT+GGG | + | tig0021440:108223-108242 | Msa1391630:CDS | 30.0% | |
| TTCCATCTCAGAAAAATAGA+TGG | + | tig0021440:108309-108328 | Msa1391630:CDS | 30.0% | |
| GAAAAATAGATGGACAGAAA+AGG | + | tig0021440:108319-108338 | Msa1391630:CDS | 30.0% | |
| AACAATCAAGAGTGGTAAAA+AGG | + | tig0021440:108385-108404 | Msa1391630:CDS | 30.0% | |
| TTTGTTAGAAGATCTATCCA+AGG | + | tig0021440:108433-108452 | Msa1391630:CDS | 30.0% | |
| TCTGACATAAGCAACAATTA+CGG | + | tig0021440:108560-108579 | Msa1391630:CDS | 30.0% | |
| ATATCATGAAAATGTCTCAC+AGG | + | tig0021440:108664-108683 | Msa1391630:CDS | 30.0% | |
| TAATGATTCCACAGGAAATT+CGG | + | tig0021440:108814-108833 | Msa1391630:CDS | 30.0% | |
| TGAATAAATTCCAATGGCTT+TGG | + | tig0021440:108861-108880 | Msa1391630:CDS | 30.0% | |
| ACTTTGATCGTTATACTTGT+TGG | - | tig0021440:108957-108976 | None:intergenic | 30.0% | |
| GTTTCAGAGAAGTTATCTTA+AGG | + | tig0021440:109190-109209 | Msa1391630:intron | 30.0% | |
| !!! | ACGTCTAAAAATGTTTTGGT+TGG | + | tig0021440:109290-109309 | Msa1391630:CDS | 30.0% |
| !!! | AAAAATGTTTTGGTTGGCAA+AGG | + | tig0021440:109296-109315 | Msa1391630:CDS | 30.0% |
| !!! | AAAATGTTTTGGTTGGCAAA+GGG | + | tig0021440:109297-109316 | Msa1391630:CDS | 30.0% |
| ATTGTGAAAGGAGAGAGAAA+TGG | - | tig0021440:104334-104353 | None:intergenic | 35.0% | |
| CTCTCCTTTCACAATCAAAA+CGG | + | tig0021440:104339-104358 | Msa1391630:five_prime_UTR | 35.0% | |
| TCTCCTTTCACAATCAAAAC+GGG | + | tig0021440:104340-104359 | Msa1391630:five_prime_UTR | 35.0% | |
| ATTACGTGGCGATAAATGAT+TGG | - | tig0021440:104392-104411 | None:intergenic | 35.0% | |
| GAATGAAATGAAGAGAATGG+GGG | - | tig0021440:104423-104442 | None:intergenic | 35.0% | |
| GTTAAATTTGTGTTGGGGAT+AGG | - | tig0021440:104518-104537 | None:intergenic | 35.0% | |
| CAAATTTAACCTTTGTTCCC+CGG | + | tig0021440:104528-104547 | Msa1391630:five_prime_UTR | 35.0% | |
| AATTGCTTAAATGCGAGCTT+TGG | - | tig0021440:104638-104657 | None:intergenic | 35.0% | |
| AAAGCTCGCATTTAAGCAAT+TGG | + | tig0021440:104637-104656 | Msa1391630:five_prime_UTR | 35.0% | |
| AAGCTCGCATTTAAGCAATT+GGG | + | tig0021440:104638-104657 | Msa1391630:five_prime_UTR | 35.0% | |
| TCATCGAATAAACGATTCTC+CGG | - | tig0021440:104775-104794 | None:intergenic | 35.0% | |
| CGTTTATTCGATGATCTTAG+AGG | + | tig0021440:104781-104800 | Msa1391630:CDS | 35.0% | |
| GAAGTTGAAGATGAAGAAGA+TGG | - | tig0021440:104838-104857 | None:intergenic | 35.0% | |
| TTACCTTCTTCGAGAATTAG+CGG | - | tig0021440:104884-104903 | None:intergenic | 35.0% | |
| AACAAAGACACTATAAGGCA+TGG | - | tig0021440:104924-104943 | None:intergenic | 35.0% | |
| CCAATAATAGCAAGGAACTT+GGG | - | tig0021440:105089-105108 | None:intergenic | 35.0% | |
| ACCAATAATAGCAAGGAACT+TGG | - | tig0021440:105090-105109 | None:intergenic | 35.0% | |
| GCTTATCACCAATAATAGCA+AGG | - | tig0021440:105097-105116 | None:intergenic | 35.0% | |
| AACAACACTCAAATCCCAAA+TGG | - | tig0021440:105370-105389 | None:intergenic | 35.0% | |
| ATCGTATAGATTTGGGCATT+TGG | + | tig0021440:105397-105416 | Msa1391630:intron | 35.0% | |
| ACTTTCATCCTTTGTAACGT+GGG | - | tig0021440:105617-105636 | None:intergenic | 35.0% | |
| TACTTTCATCCTTTGTAACG+TGG | - | tig0021440:105618-105637 | None:intergenic | 35.0% | |
| ! | TACTTGGATTTTGTGAAAGC+GGG | - | tig0021440:105666-105685 | None:intergenic | 35.0% |
| ! | TCTTGCACTTTTCATGAGAT+AGG | + | tig0021440:105823-105842 | Msa1391630:intron | 35.0% |
| AATGGCAATCAACAAATGCT+TGG | + | tig0021440:106022-106041 | Msa1391630:intron | 35.0% | |
| AAAACGGTGAGGAAAATACT+TGG | - | tig0021440:106151-106170 | None:intergenic | 35.0% | |
| ! | CATTTTATTGTCACCACAGA+TGG | - | tig0021440:106447-106466 | None:intergenic | 35.0% |
| GCAACTATTTCCAGACAAAA+GGG | + | tig0021440:106565-106584 | Msa1391630:CDS | 35.0% | |
| TATTGTGTGTAACTGTTGCT+TGG | - | tig0021440:106674-106693 | None:intergenic | 35.0% | |
| CAAAGTGAGCAAACGTATTT+AGG | - | tig0021440:106710-106729 | None:intergenic | 35.0% | |
| CTAAATACGTTTGCTCACTT+TGG | + | tig0021440:106708-106727 | Msa1391630:intron | 35.0% | |
| AAAAGCGAACCAATTAAGCA+CGG | - | tig0021440:106770-106789 | None:intergenic | 35.0% | |
| ! | GTGCTAAGGCTAGTTATATA+GGG | - | tig0021440:106817-106836 | None:intergenic | 35.0% |
| ! | TGTGCTAAGGCTAGTTATAT+AGG | - | tig0021440:106818-106837 | None:intergenic | 35.0% |
| TCATACAGATAATATGGCAG+TGG | - | tig0021440:107011-107030 | None:intergenic | 35.0% | |
| GAATTATGAACTGCCTTTCT+TGG | + | tig0021440:107123-107142 | Msa1391630:intron | 35.0% | |
| ACTTGGAGAACATAAAGCAA+AGG | - | tig0021440:107264-107283 | None:intergenic | 35.0% | |
| !! | TTATGTTCTCCAAGTTGATG+TGG | + | tig0021440:107269-107288 | Msa1391630:CDS | 35.0% |
| ! | AAAGTTTTCGAACTTCTGCA+AGG | - | tig0021440:107299-107318 | None:intergenic | 35.0% |
| AACACAATGGTCTGTATCTT+AGG | - | tig0021440:107477-107496 | None:intergenic | 35.0% | |
| TGTTGCTAAGTGATGCTTAT+GGG | + | tig0021440:107493-107512 | Msa1391630:CDS | 35.0% | |
| GTATCATTTATTGTCGCATG+TGG | + | tig0021440:107698-107717 | Msa1391630:CDS | 35.0% | |
| ! | TAAAATGGAAAAGCATGCAG+AGG | + | tig0021440:107866-107885 | Msa1391630:CDS | 35.0% |
| !! | ACAACACAGACACTTGTTTT+AGG | + | tig0021440:107889-107908 | Msa1391630:CDS | 35.0% |
| ATTTATCTCAGCTATTGCTG+TGG | + | tig0021440:107935-107954 | Msa1391630:CDS | 35.0% | |
| TTGTTATATTCTACAAGCGC+AGG | - | tig0021440:108125-108144 | None:intergenic | 35.0% | |
| ! | GTTTAAGTTCTTCAGCACTA+TGG | - | tig0021440:108268-108287 | None:intergenic | 35.0% |
| GCTGAAGAACTTAAACAAGA+TGG | + | tig0021440:108272-108291 | Msa1391630:CDS | 35.0% | |
| !! | GTCCATCTATTTTTCTGAGA+TGG | - | tig0021440:108314-108333 | None:intergenic | 35.0% |
| AAGATCTATCCAAGGAACTT+GGG | + | tig0021440:108441-108460 | Msa1391630:CDS | 35.0% | |
| TAATCATTCTGTAGCAGTTG+AGG | + | tig0021440:108517-108536 | Msa1391630:CDS | 35.0% | |
| TGGAAGTTTGGTCGTAATAA+TGG | + | tig0021440:108881-108900 | Msa1391630:CDS | 35.0% | |
| TTAAAGTTCCCATCACATTC+TGG | - | tig0021440:109048-109067 | None:intergenic | 35.0% | |
| !!! | TTGCCCGTTTTGATTGTGAA+AGG | - | tig0021440:104346-104365 | None:intergenic | 40.0% |
| TGAATTGTGTAGGAAGAAGG+AGG | - | tig0021440:104460-104479 | None:intergenic | 40.0% | |
| TCGCATTTAAGCAATTGGGT+CGG | + | tig0021440:104642-104661 | Msa1391630:five_prime_UTR | 40.0% | |
| !!! | GATGCTGTTTTTGACAATGG+CGG | - | tig0021440:104709-104728 | None:intergenic | 40.0% |
| GCCATTGTCAAAAACAGCAT+CGG | + | tig0021440:104708-104727 | Msa1391630:CDS | 40.0% | |
| !!! | ACCGATGCTGTTTTTGACAA+TGG | - | tig0021440:104712-104731 | None:intergenic | 40.0% |
| TCGGTTTCGTCTTTAATCTC+CGG | + | tig0021440:104727-104746 | Msa1391630:CDS | 40.0% | |
| ATGATCTTAGAGGTTTGCAG+TGG | + | tig0021440:104791-104810 | Msa1391630:CDS | 40.0% | |
| TTGCAGTGGCGTATAAATCT+TGG | + | tig0021440:104805-104824 | Msa1391630:CDS | 40.0% | |
| TGCAGTGGCGTATAAATCTT+GGG | + | tig0021440:104806-104825 | Msa1391630:CDS | 40.0% | |
| AGAAGGTAAGCCAATTCACT+TGG | + | tig0021440:104895-104914 | Msa1391630:intron | 40.0% | |
| !! | CCCAAGTTCCTTGCTATTAT+TGG | + | tig0021440:105086-105105 | Msa1391630:intron | 40.0% |
| CTCTCAACAAGCACAATACA+TGG | + | tig0021440:105189-105208 | Msa1391630:intron | 40.0% | |
| !! | GCGTTGATTTATTCGTCATG+TGG | + | tig0021440:105419-105438 | Msa1391630:intron | 40.0% |
| ! | TCAGGTATGCTAGTTTGAGA+GGG | + | tig0021440:105575-105594 | Msa1391630:intron | 40.0% |
| CTTTCATCCTTTGTAACGTG+GGG | - | tig0021440:105616-105635 | None:intergenic | 40.0% | |
| TAGTTCACCCAATCTTGTCA+TGG | + | tig0021440:105636-105655 | Msa1391630:CDS | 40.0% | |
| TTACACCCCATTATGTCATC+TGG | + | tig0021440:105701-105720 | Msa1391630:intron | 40.0% | |
| TATCAAACTATGTTTCCGGG+AGG | + | tig0021440:105934-105953 | Msa1391630:intron | 40.0% | |
| TGGTATCACTAAATTCCTCC+CGG | - | tig0021440:105952-105971 | None:intergenic | 40.0% | |
| GTTGGCACTAAATAAGCATG+TGG | - | tig0021440:105972-105991 | None:intergenic | 40.0% | |
| !!! | CTTTTTTCACAATGCAGAGC+TGG | + | tig0021440:106497-106516 | Msa1391630:CDS | 40.0% |
| TCACGTTTATACCCAGAACA+TGG | + | tig0021440:106543-106562 | Msa1391630:CDS | 40.0% | |
| GGAAATAGTTGCCATGTTCT+GGG | - | tig0021440:106557-106576 | None:intergenic | 40.0% | |
| TGGAAATAGTTGCCATGTTC+TGG | - | tig0021440:106558-106577 | None:intergenic | 40.0% | |
| GGCAACTATTTCCAGACAAA+AGG | + | tig0021440:106564-106583 | Msa1391630:CDS | 40.0% | |
| AAATCCGTCTCAATATGCCT+TGG | - | tig0021440:106593-106612 | None:intergenic | 40.0% | |
| ACCTTGTCTATAACCACACT+CGG | - | tig0021440:106640-106659 | None:intergenic | 40.0% | |
| AGCAAACGTATTTAGGAGGA+AGG | - | tig0021440:106703-106722 | None:intergenic | 40.0% | |
| AGTGAGCAAACGTATTTAGG+AGG | - | tig0021440:106707-106726 | None:intergenic | 40.0% | |
| GGTAAGTAACCGTGCTTAAT+TGG | + | tig0021440:106758-106777 | Msa1391630:intron | 40.0% | |
| TCTCATGCTCTCTACACTAT+TGG | + | tig0021440:106913-106932 | Msa1391630:intron | 40.0% | |
| GCTCTCTACACTATTGGAAA+CGG | + | tig0021440:106919-106938 | Msa1391630:intron | 40.0% | |
| CTCTCTACACTATTGGAAAC+GGG | + | tig0021440:106920-106939 | Msa1391630:intron | 40.0% | |
| CCTTTCAATAAAGCAGATGC+AGG | - | tig0021440:107048-107067 | None:intergenic | 40.0% | |
| ! | CCTGCATCTGCTTTATTGAA+AGG | + | tig0021440:107045-107064 | Msa1391630:intron | 40.0% |
| AGCATCACTTAGCAACACAA+TGG | - | tig0021440:107490-107509 | None:intergenic | 40.0% | |
| ! | GTGTTGCTAAGTGATGCTTA+TGG | + | tig0021440:107492-107511 | Msa1391630:CDS | 40.0% |
| GTTGCTAAGTGATGCTTATG+GGG | + | tig0021440:107494-107513 | Msa1391630:CDS | 40.0% | |
| TTCTCTTATTCTCCTGTTGC+TGG | + | tig0021440:107630-107649 | Msa1391630:CDS | 40.0% | |
| TCTCTTATTCTCCTGTTGCT+GGG | + | tig0021440:107631-107650 | Msa1391630:CDS | 40.0% | |
| TATAGCCATCTCGTTGATCT+CGG | + | tig0021440:107732-107751 | Msa1391630:CDS | 40.0% | |
| AGGATCTTTCATTCATCTCG+CGG | + | tig0021440:107909-107928 | Msa1391630:CDS | 40.0% | |
| ! | GCTTAATAATCTCTGGAGAC+AGG | - | tig0021440:108012-108031 | None:intergenic | 40.0% |
| CTGGGAAGCTTAATAATCTC+TGG | - | tig0021440:108019-108038 | None:intergenic | 40.0% | |
| ACTTAATGCAAGAGTCTGCA+AGG | - | tig0021440:108081-108100 | None:intergenic | 40.0% | |
| TGAACCTGATTCACATGCAA+TGG | - | tig0021440:108183-108202 | None:intergenic | 40.0% | |
| TCTTCCCAGTAGCTATTATC+AGG | - | tig0021440:108230-108249 | None:intergenic | 40.0% | |
| ATAGCTACTGGGAAGAAAAG+TGG | + | tig0021440:108234-108253 | Msa1391630:CDS | 40.0% | |
| CTCTTGATTGTTGACGAAGA+TGG | - | tig0021440:108377-108396 | None:intergenic | 40.0% | |
| TCTTCGTCAACAATCAAGAG+TGG | + | tig0021440:108377-108396 | Msa1391630:CDS | 40.0% | |
| GAAGATCTATCCAAGGAACT+TGG | + | tig0021440:108440-108459 | Msa1391630:CDS | 40.0% | |
| TCATGAAACATTATGCCAGC+AGG | + | tig0021440:108493-108512 | Msa1391630:CDS | 40.0% | |
| CTACAGAATGATTATCCTGC+TGG | - | tig0021440:108511-108530 | None:intergenic | 40.0% | |
| AGATGTCTTAGCAGAAACAC+CGG | + | tig0021440:108593-108612 | Msa1391630:CDS | 40.0% | |
| ACTCATTAGGAGAACTAGCT+AGG | - | tig0021440:108640-108659 | None:intergenic | 40.0% | |
| TCTCACAGGAAAGTAGTGTT+GGG | + | tig0021440:108678-108697 | Msa1391630:CDS | 40.0% | |
| ATTGGAAGAGGTGAATCGAT+GGG | - | tig0021440:108749-108768 | None:intergenic | 40.0% | |
| !! | TTCCAATGGCTTTGGAAGTT+TGG | + | tig0021440:108869-108888 | Msa1391630:CDS | 40.0% |
| !! | GAAAAGAGTACTTGCTTCTG+AGG | + | tig0021440:108919-108938 | Msa1391630:CDS | 40.0% |
| TACCTGAATATGCTCAAGCA+TGG | - | tig0021440:109086-109105 | None:intergenic | 40.0% | |
| !! | CTTCTCTGAAACGTAAGTTC+AGG | - | tig0021440:109182-109201 | None:intergenic | 40.0% |
| ATGTGAGACGAACCTTACAA+TGG | + | tig0021440:109380-109399 | Msa1391630:exon | 40.0% | |
| TACACATGTCGACCATTGTA+AGG | - | tig0021440:109395-109414 | None:intergenic | 40.0% | |
| TGAAATGAAGAGAATGGGGG+TGG | - | tig0021440:104420-104439 | None:intergenic | 45.0% | |
| GTGTATATACCGGGGAACAA+AGG | - | tig0021440:104540-104559 | None:intergenic | 45.0% | |
| AATAAACGATTCTCCGGCAC+CGG | - | tig0021440:104769-104788 | None:intergenic | 45.0% | |
| GCAGTGGCGTATAAATCTTG+GGG | + | tig0021440:104807-104826 | Msa1391630:CDS | 45.0% | |
| GGCATGGTTACCAAGTGAAT+TGG | - | tig0021440:104908-104927 | None:intergenic | 45.0% | |
| CTCAAACTAGCATACCTGAC+AGG | - | tig0021440:105574-105593 | None:intergenic | 45.0% | |
| ! | GTCAGGTATGCTAGTTTGAG+AGG | + | tig0021440:105574-105593 | Msa1391630:intron | 45.0% |
| GGGTTGTCCATGACAAGATT+GGG | - | tig0021440:105646-105665 | None:intergenic | 45.0% | |
| AACCTTCTTGTGAGTGCAGT+TGG | - | tig0021440:105990-106009 | None:intergenic | 45.0% | |
| ATCTAACCCTCTCTTTCCGT+TGG | + | tig0021440:106419-106438 | Msa1391630:intron | 45.0% | |
| CCTTGTCTATAACCACACTC+GGG | - | tig0021440:106639-106658 | None:intergenic | 45.0% | |
| ! | TACGTTTGCTCACTTTGGGA+TGG | + | tig0021440:106713-106732 | Msa1391630:intron | 45.0% |
| CGGTTACTTACCGAGTTAGA+AGG | - | tig0021440:106750-106769 | None:intergenic | 45.0% | |
| TTAGGCGTGCTAATGTGCTA+AGG | - | tig0021440:106831-106850 | None:intergenic | 45.0% | |
| ! | GACTTGACGGATGACGAAAT+CGG | + | tig0021440:107405-107424 | Msa1391630:CDS | 45.0% |
| ! | GATGACGAAATCGGTTCTCA+CGG | + | tig0021440:107414-107433 | Msa1391630:CDS | 45.0% |
| ! | GAAATCGGTTCTCACGGAAA+AGG | + | tig0021440:107420-107439 | Msa1391630:CDS | 45.0% |
| AGTGATGCTTATGGGGTTGA+AGG | + | tig0021440:107501-107520 | Msa1391630:CDS | 45.0% | |
| TTATGGGGTTGAAGGTGAAC+TGG | + | tig0021440:107509-107528 | Msa1391630:CDS | 45.0% | |
| TATGGGGTTGAAGGTGAACT+GGG | + | tig0021440:107510-107529 | Msa1391630:CDS | 45.0% | |
| GCTTTAATGAATGGGGCTCA+CGG | + | tig0021440:107585-107604 | Msa1391630:CDS | 45.0% | |
| TACAGGTGGCAAACCAGTAT+GGG | - | tig0021440:107658-107677 | None:intergenic | 45.0% | |
| TTACAGGTGGCAAACCAGTA+TGG | - | tig0021440:107659-107678 | None:intergenic | 45.0% | |
| GCAGAAGCTTCAATTACAGG+TGG | - | tig0021440:107672-107691 | None:intergenic | 45.0% | |
| GCAGCAGAAGCTTCAATTAC+AGG | - | tig0021440:107675-107694 | None:intergenic | 45.0% | |
| ATAGCCATCTCGTTGATCTC+GGG | + | tig0021440:107733-107752 | Msa1391630:CDS | 45.0% | |
| TTGACAACCTCTTGATCGTC+TGG | + | tig0021440:107817-107836 | Msa1391630:CDS | 45.0% | |
| TGACAACCTCTTGATCGTCT+GGG | + | tig0021440:107818-107837 | Msa1391630:CDS | 45.0% | |
| TTTCATCCCAGACGATCAAG+AGG | - | tig0021440:107827-107846 | None:intergenic | 45.0% | |
| ACCACCATTGCATGTGAATC+AGG | + | tig0021440:108176-108195 | Msa1391630:CDS | 45.0% | |
| ACCTGATTCACATGCAATGG+TGG | - | tig0021440:108180-108199 | None:intergenic | 45.0% | |
| TTCTTCTGACCCAAGTTCCT+TGG | - | tig0021440:108453-108472 | None:intergenic | 45.0% | |
| GTCTCACAGGAAAGTAGTGT+TGG | + | tig0021440:108677-108696 | Msa1391630:CDS | 45.0% | |
| GATTGGAAGAGGTGAATCGA+TGG | - | tig0021440:108750-108769 | None:intergenic | 45.0% | |
| GGATGATCAGAGATTGGAAG+AGG | - | tig0021440:108761-108780 | None:intergenic | 45.0% | |
| CTCTCAGGATGATCAGAGAT+TGG | - | tig0021440:108767-108786 | None:intergenic | 45.0% | |
| GAAATTCGGCCACACTTTCT+AGG | + | tig0021440:108828-108847 | Msa1391630:CDS | 45.0% | |
| GACCAAACTTCCAAAGCCAT+TGG | - | tig0021440:108874-108893 | None:intergenic | 45.0% | |
| AAGATCACCAGCTGTAGAAG+AGG | - | tig0021440:108990-109009 | None:intergenic | 45.0% | |
| TTCTGCTGACCAGAATGTGA+TGG | + | tig0021440:109036-109055 | Msa1391630:CDS | 45.0% | |
| TCTGCTGACCAGAATGTGAT+GGG | + | tig0021440:109037-109056 | Msa1391630:CDS | 45.0% | |
| GTCCATGCTTGAGCATATTC+AGG | + | tig0021440:109081-109100 | Msa1391630:CDS | 45.0% | |
| GGACTGTGTGTTTGTGTAAC+AGG | + | tig0021440:109211-109230 | Msa1391630:intron | 45.0% | |
| TCTGCTTTCCAACAAGAGTG+TGG | + | tig0021440:109242-109261 | Msa1391630:CDS | 45.0% | |
| ! | TTTCCAACAAGAGTGTGGTC+AGG | + | tig0021440:109247-109266 | Msa1391630:CDS | 45.0% |
| ! | TTCCAACAAGAGTGTGGTCA+GGG | + | tig0021440:109248-109267 | Msa1391630:CDS | 45.0% |
| CGTCTCACATCTCAGACAAA+AGG | - | tig0021440:109370-109389 | None:intergenic | 45.0% | |
| TTGCCGGAAAATCATGCCAC+CGG | + | tig0021440:104672-104691 | Msa1391630:exon | 50.0% | |
| AATCTCCGGCACCATTTCTC+AGG | + | tig0021440:104741-104760 | Msa1391630:CDS | 50.0% | |
| GGCACGACGAAGATCATCAA+CGG | - | tig0021440:104860-104879 | None:intergenic | 50.0% | |
| CCTTCTTCGAGAATTAGCGG+TGG | - | tig0021440:104881-104900 | None:intergenic | 50.0% | |
| CCACCGCTAATTCTCGAAGA+AGG | + | tig0021440:104878-104897 | Msa1391630:CDS | 50.0% | |
| ! | GGTATGCTAGTTTGAGAGGG+CGG | + | tig0021440:105578-105597 | Msa1391630:intron | 50.0% |
| TTGTAACGTGGGGATCAACC+AGG | - | tig0021440:105606-105625 | None:intergenic | 50.0% | |
| GGTTGATCCCCACGTTACAA+AGG | + | tig0021440:105606-105625 | Msa1391630:CDS | 50.0% | |
| CGGGTTGTCCATGACAAGAT+TGG | - | tig0021440:105647-105666 | None:intergenic | 50.0% | |
| GCAGTATAACGGCCAAATGC+TGG | - | tig0021440:105739-105758 | None:intergenic | 50.0% | |
| TGCCAACTGCACTCACAAGA+AGG | + | tig0021440:105985-106004 | Msa1391630:intron | 50.0% | |
| AAGGAGATGGAAGACTCGTG+TGG | - | tig0021440:106289-106308 | None:intergenic | 50.0% | |
| ATGGAGCCAACGGAAAGAGA+GGG | - | tig0021440:106428-106447 | None:intergenic | 50.0% | |
| TTCACAATGCAGAGCTGGAG+AGG | + | tig0021440:106502-106521 | Msa1391630:CDS | 50.0% | |
| !! | TTCCAGACAAAAGGGTGCCA+AGG | + | tig0021440:106573-106592 | Msa1391630:CDS | 50.0% |
| GGTGCCAAGGCATATTGAGA+CGG | + | tig0021440:106586-106605 | Msa1391630:CDS | 50.0% | |
| TGTCTTAGACATCCCGAGTG+TGG | + | tig0021440:106624-106643 | Msa1391630:CDS | 50.0% | |
| CCCGAGTGTGGTTATAGACA+AGG | + | tig0021440:106636-106655 | Msa1391630:CDS | 50.0% | |
| ! | GTGTAACTGTTGCTTGGCTG+AGG | - | tig0021440:106668-106687 | None:intergenic | 50.0% |
| GGAATCTGGAAGCCCAAGAA+AGG | - | tig0021440:107139-107158 | None:intergenic | 50.0% | |
| TAGCCATCTCGTTGATCTCG+GGG | + | tig0021440:107734-107753 | Msa1391630:CDS | 50.0% | |
| !! | CAGCGTAGAGCAAAGTACTG+TGG | - | tig0021440:107765-107784 | None:intergenic | 50.0% |
| ! | AATCTCTGGAGACAGGTCGT+AGG | - | tig0021440:108005-108024 | None:intergenic | 50.0% |
| GAGGCAGAGCAACAAGATGA+TGG | + | tig0021440:108536-108555 | Msa1391630:CDS | 50.0% | |
| ! | GAATGAGTTTTCCTCGCTGC+CGG | - | tig0021440:108615-108634 | None:intergenic | 50.0% |
| TCCTGAGAGCAACCTATCTC+CGG | + | tig0021440:108778-108797 | Msa1391630:CDS | 50.0% | |
| GGGCGCAATAATGATTCCAC+AGG | + | tig0021440:108806-108825 | Msa1391630:CDS | 50.0% | |
| AAGTGTGGCCGAATTTCCTG+TGG | - | tig0021440:108825-108844 | None:intergenic | 50.0% | |
| ACAGCTTCCTCTTCTACAGC+TGG | + | tig0021440:108980-108999 | Msa1391630:CDS | 50.0% | |
| TTCCCTGACCACACTCTTGT+TGG | - | tig0021440:109253-109272 | None:intergenic | 50.0% | |
| GTGTGGTCAGGGAACTTCAT+TGG | + | tig0021440:109259-109278 | Msa1391630:CDS | 50.0% | |
| !!! | TGTTTTGGTTGGCAAAGGGC+AGG | + | tig0021440:109301-109320 | Msa1391630:CDS | 50.0% |
| TACTGCCATGTCAGCTCTCA+AGG | + | tig0021440:109325-109344 | Msa1391630:CDS | 50.0% | |
| AAGCTCCTTGAGAGCTGACA+TGG | - | tig0021440:109333-109352 | None:intergenic | 50.0% | |
| TGGGGGTGGTCGAAATTACG+TGG | - | tig0021440:104406-104425 | None:intergenic | 55.0% | |
| ! | GAGCCGGTGGCATGATTTTC+CGG | - | tig0021440:104678-104697 | None:intergenic | 55.0% |
| !! | AATCATGCCACCGGCTCTGT+TGG | + | tig0021440:104681-104700 | Msa1391630:exon | 55.0% |
| !! | AATGGCGGATCCAACAGAGC+CGG | - | tig0021440:104694-104713 | None:intergenic | 55.0% |
| CGGTTCCTGAGAAATGGTGC+CGG | - | tig0021440:104749-104768 | None:intergenic | 55.0% | |
| CGGCACCATTTCTCAGGAAC+CGG | + | tig0021440:104747-104766 | Msa1391630:CDS | 55.0% | |
| CATTTCTCAGGAACCGGTGC+CGG | + | tig0021440:104753-104772 | Msa1391630:CDS | 55.0% | |
| GATGGAGCCAACGGAAAGAG+AGG | - | tig0021440:106429-106448 | None:intergenic | 55.0% | |
| !! | CTTTCCGTTGGCTCCATCTG+TGG | + | tig0021440:106431-106450 | Msa1391630:intron | 55.0% |
| GTCACCACAGATGGAGCCAA+CGG | - | tig0021440:106438-106457 | None:intergenic | 55.0% | |
| CAATGCAGAGCTGGAGAGGA+TGG | + | tig0021440:106506-106525 | Msa1391630:CDS | 55.0% | |
| ! | TGCCTTGGCACCCTTTTGTC+TGG | - | tig0021440:106578-106597 | None:intergenic | 55.0% |
| ! | CAAGGCGCTCCACATCAACT+TGG | - | tig0021440:107281-107300 | None:intergenic | 55.0% |
| GGCTCACGGTTCAGTTGCAA+TGG | + | tig0021440:107599-107618 | Msa1391630:CDS | 55.0% | |
| CAACCCCGAGATCAACGAGA+TGG | - | tig0021440:107740-107759 | None:intergenic | 55.0% | |
| ! | TTCTACAAGCGCAGGTGTCG+AGG | - | tig0021440:108117-108136 | None:intergenic | 55.0% |
| ACCGGAGATAGGTTGCTCTC+AGG | - | tig0021440:108782-108801 | None:intergenic | 55.0% | |
| TGAGAGCAACCTATCTCCGG+TGG | + | tig0021440:108781-108800 | Msa1391630:CDS | 55.0% | |
| TCATTATTGCGCCCTGCCAC+CGG | - | tig0021440:108800-108819 | None:intergenic | 55.0% | |
| TTGGGTCGGTGAACGCTTGC+CGG | + | tig0021440:104656-104675 | Msa1391630:five_prime_UTR | 60.0% | |
| !! | CGGCACCGGTTCCTGAGAAA+TGG | - | tig0021440:104755-104774 | None:intergenic | 60.0% |
| TAGTTTGAGAGGGCGGCTCC+TGG | + | tig0021440:105585-105604 | Msa1391630:CDS | 60.0% | |
| TGCAGAGCTGGAGAGGATGG+TGG | + | tig0021440:106509-106528 | Msa1391630:CDS | 60.0% | |
| !! | GCTGGAGAGGATGGTGGATC+AGG | + | tig0021440:106515-106534 | Msa1391630:CDS | 60.0% |
| CCAGTATGGGACCCAGCAAC+AGG | - | tig0021440:107645-107664 | None:intergenic | 60.0% | |
| CCTGTTGCTGGGTCCCATAC+TGG | + | tig0021440:107642-107661 | Msa1391630:CDS | 60.0% | |
| TAGCAGAAACACCGGCAGCG+AGG | + | tig0021440:108601-108620 | Msa1391630:CDS | 60.0% | |
| AGCAACCTATCTCCGGTGGC+AGG | + | tig0021440:108785-108804 | Msa1391630:CDS | 60.0% | |
| GCAACCTATCTCCGGTGGCA+GGG | + | tig0021440:108786-108805 | Msa1391630:CDS | 60.0% | |
| GGCGGATCCAACAGAGCCGG+TGG | - | tig0021440:104691-104710 | None:intergenic | 70.0% | |
| TGCGCCCTGCCACCGGAGAT+AGG | - | tig0021440:108793-108812 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021440 | gene | 104286 | 109556 | 104286 | ID=Msa1391630;Name=Msa1391630 |
| tig0021440 | mRNA | 104286 | 109556 | 104286 | ID=Msa1391630-mRNA-1;Parent=Msa1391630;Name=Msa1391630-mRNA-1;_AED=0.08;_eAED=0.08;_QI=399|1|1|1|1|1|5|171|836 |
| tig0021440 | exon | 104286 | 104899 | 104286 | ID=Msa1391630-mRNA-1:exon:12734;Parent=Msa1391630-mRNA-1 |
| tig0021440 | exon | 105579 | 105682 | 105579 | ID=Msa1391630-mRNA-1:exon:12735;Parent=Msa1391630-mRNA-1 |
| tig0021440 | exon | 106481 | 106657 | 106481 | ID=Msa1391630-mRNA-1:exon:12736;Parent=Msa1391630-mRNA-1 |
| tig0021440 | exon | 107241 | 109102 | 107241 | ID=Msa1391630-mRNA-1:exon:12737;Parent=Msa1391630-mRNA-1 |
| tig0021440 | exon | 109233 | 109556 | 109233 | ID=Msa1391630-mRNA-1:exon:12738;Parent=Msa1391630-mRNA-1 |
| tig0021440 | five_prime_UTR | 104286 | 104684 | 104286 | ID=Msa1391630-mRNA-1:five_prime_utr;Parent=Msa1391630-mRNA-1 |
| tig0021440 | CDS | 104685 | 104899 | 104685 | ID=Msa1391630-mRNA-1:cds;Parent=Msa1391630-mRNA-1 |
| tig0021440 | CDS | 105579 | 105682 | 105579 | ID=Msa1391630-mRNA-1:cds;Parent=Msa1391630-mRNA-1 |
| tig0021440 | CDS | 106481 | 106657 | 106481 | ID=Msa1391630-mRNA-1:cds;Parent=Msa1391630-mRNA-1 |
| tig0021440 | CDS | 107241 | 109102 | 107241 | ID=Msa1391630-mRNA-1:cds;Parent=Msa1391630-mRNA-1 |
| tig0021440 | CDS | 109233 | 109385 | 109233 | ID=Msa1391630-mRNA-1:cds;Parent=Msa1391630-mRNA-1 |
| tig0021440 | three_prime_UTR | 109386 | 109556 | 109386 | ID=Msa1391630-mRNA-1:three_prime_utr;Parent=Msa1391630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
