Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1396020 | XP_013449529.1 | 96.825 | 315 | 9 | 1 | 1 | 314 | 1 | 315 | 0.0 | 628 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1396020 | sp|Q9FYE1|MCA9_ARATH | 61.162 | 327 | 98 | 7 | 6 | 314 | 9 | 324 | 1.63e-138 | 397 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1396020 | Q2HUG6 | 96.825 | 315 | 9 | 1 | 1 | 314 | 1 | 315 | 0.0 | 628 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003220 | Msa1396020 | 0.807653 | 4.549387e-50 | -8.615850e-47 |
| Msa0041690 | Msa1396020 | 0.807157 | 5.797258e-50 | -8.615850e-47 |
| Msa0054530 | Msa1396020 | 0.833515 | 5.102587e-56 | -8.615850e-47 |
| Msa0074750 | Msa1396020 | 0.814441 | 1.538370e-51 | -8.615850e-47 |
| Msa1396020 | Msa1426910 | 0.814023 | 1.902694e-51 | -8.615850e-47 |
| Msa1396020 | Msa1434040 | 0.815214 | 1.036920e-51 | -8.615850e-47 |
| Msa1396020 | Msa1435260 | 0.810312 | 1.227225e-50 | -8.615850e-47 |
| Msa0756380 | Msa1396020 | 0.800927 | 1.145696e-48 | -8.615850e-47 |
| Msa0784480 | Msa1396020 | 0.801868 | 7.349644e-49 | -8.615850e-47 |
| Msa0789560 | Msa1396020 | 0.836102 | 1.139068e-56 | -8.615850e-47 |
| Msa0124320 | Msa1396020 | 0.805890 | 1.072682e-49 | -8.615850e-47 |
| Msa0191460 | Msa1396020 | 0.853001 | 3.188052e-61 | -8.615850e-47 |
| Msa0191560 | Msa1396020 | 0.854788 | 9.748944e-62 | -8.615850e-47 |
| Msa0220730 | Msa1396020 | 0.808513 | 2.985726e-50 | -8.615850e-47 |
| Msa0233560 | Msa1396020 | 0.840214 | 9.948018e-58 | -8.615850e-47 |
| Msa1250530 | Msa1396020 | 0.801537 | 8.591519e-49 | -8.615850e-47 |
| Msa1258980 | Msa1396020 | 0.802558 | 5.298899e-49 | -8.615850e-47 |
| Msa1259640 | Msa1396020 | 0.821332 | 4.270536e-53 | -8.615850e-47 |
| Msa1297530 | Msa1396020 | 0.800294 | 1.542001e-48 | -8.615850e-47 |
| Msa1329790 | Msa1396020 | 0.823566 | 1.292719e-53 | -8.615850e-47 |
| Msa1330630 | Msa1396020 | 0.803956 | 2.721652e-49 | -8.615850e-47 |
| Msa0395980 | Msa1396020 | 0.823589 | 1.276697e-53 | -8.615850e-47 |
| Msa0432160 | Msa1396020 | 0.802584 | 5.234108e-49 | -8.615850e-47 |
| Msa0440510 | Msa1396020 | 0.817257 | 3.621606e-52 | -8.615850e-47 |
| Msa1072520 | Msa1396020 | 0.966041 | 2.150221e-125 | -8.615850e-47 |
| Msa0244970 | Msa1396020 | 0.805429 | 1.340864e-49 | -8.615850e-47 |
| Msa0263920 | Msa1396020 | 0.813966 | 1.958160e-51 | -8.615850e-47 |
| Msa0275300 | Msa1396020 | 0.822901 | 1.848456e-53 | -8.615850e-47 |
| Msa0312220 | Msa1396020 | 0.826184 | 3.117271e-54 | -8.615850e-47 |
| Msa0321690 | Msa1396020 | 0.811046 | 8.515655e-51 | -8.615850e-47 |
| Msa0322900 | Msa1396020 | 0.811715 | 6.095815e-51 | -8.615850e-47 |
| Msa0362890 | Msa1396020 | 0.812161 | 4.873319e-51 | -8.615850e-47 |
| Msa1117910 | Msa1396020 | 0.868053 | 8.690258e-66 | -8.615850e-47 |
| Msa1205590 | Msa1396020 | 0.807025 | 6.183881e-50 | -8.615850e-47 |
| Msa1208790 | Msa1396020 | 0.808186 | 3.505700e-50 | -8.615850e-47 |
| Msa1211340 | Msa1396020 | 0.820943 | 5.251343e-53 | -8.615850e-47 |
| Msa0491000 | Msa1396020 | 0.818247 | 2.165011e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1396020 | MtrunA17_Chr7g0254941 | 96.825 | 315 | 9 | 1 | 1 | 314 | 1 | 315 | 0.0 | 628 |
| Msa1396020 | MtrunA17_Chr2g0309701 | 34.158 | 404 | 159 | 7 | 7 | 312 | 6 | 400 | 3.53e-61 | 200 |
| Msa1396020 | MtrunA17_Chr8g0356311 | 53.846 | 156 | 69 | 2 | 7 | 161 | 3 | 156 | 1.12e-49 | 170 |
| Msa1396020 | MtrunA17_Chr8g0356311 | 51.807 | 83 | 40 | 0 | 230 | 312 | 329 | 411 | 1.38e-22 | 97.1 |
| Msa1396020 | MtrunA17_Chr8g0356911 | 25.776 | 322 | 175 | 9 | 6 | 312 | 3 | 275 | 9.16e-24 | 98.2 |
| Msa1396020 | MtrunA17_Chr7g0233321 | 32.203 | 177 | 111 | 3 | 6 | 178 | 73 | 244 | 5.97e-21 | 92.0 |
| Msa1396020 | MtrunA17_Chr2g0279251 | 35.526 | 152 | 92 | 3 | 5 | 151 | 87 | 237 | 1.56e-20 | 90.9 |
| Msa1396020 | MtrunA17_Chr4g0050351 | 36.424 | 151 | 90 | 4 | 5 | 151 | 124 | 272 | 3.58e-19 | 87.4 |
| Msa1396020 | MtrunA17_Chr2g0279271 | 36.538 | 156 | 84 | 6 | 5 | 151 | 115 | 264 | 6.47e-19 | 86.3 |
| Msa1396020 | MtrunA17_Chr2g0279261 | 33.333 | 153 | 94 | 5 | 5 | 151 | 109 | 259 | 1.57e-17 | 82.4 |
| Msa1396020 | MtrunA17_Chr1g0175941 | 32.099 | 162 | 102 | 5 | 5 | 160 | 15 | 174 | 1.67e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1396020 | AT5G04200.1 | 61.162 | 327 | 98 | 7 | 6 | 314 | 9 | 324 | 1.66e-139 | 397 |
| Msa1396020 | AT1G79320.1 | 40.000 | 365 | 156 | 7 | 9 | 312 | 5 | 367 | 9.63e-81 | 249 |
| Msa1396020 | AT1G79330.1 | 38.386 | 409 | 147 | 9 | 7 | 312 | 3 | 409 | 1.43e-76 | 240 |
| Msa1396020 | AT1G16420.1 | 37.008 | 381 | 157 | 10 | 9 | 312 | 5 | 379 | 2.18e-66 | 213 |
| Msa1396020 | AT1G79310.1 | 33.582 | 402 | 169 | 9 | 7 | 312 | 3 | 402 | 3.13e-58 | 192 |
| Msa1396020 | AT1G79340.1 | 56.410 | 156 | 65 | 2 | 7 | 161 | 3 | 156 | 2.69e-53 | 180 |
| Msa1396020 | AT1G79340.1 | 54.217 | 83 | 38 | 0 | 230 | 312 | 335 | 417 | 2.16e-23 | 99.8 |
| Msa1396020 | AT4G25110.1 | 28.239 | 301 | 155 | 7 | 6 | 296 | 115 | 364 | 2.16e-22 | 97.1 |
| Msa1396020 | AT4G25110.2 | 28.239 | 301 | 154 | 7 | 6 | 296 | 115 | 363 | 4.04e-22 | 96.3 |
| Msa1396020 | AT1G02170.1 | 32.768 | 177 | 109 | 4 | 6 | 178 | 79 | 249 | 1.39e-21 | 94.4 |
| Msa1396020 | AT5G64240.1 | 33.908 | 174 | 105 | 3 | 6 | 175 | 89 | 256 | 7.94e-20 | 88.2 |
| Msa1396020 | AT5G64240.2 | 33.908 | 174 | 105 | 3 | 6 | 175 | 89 | 256 | 9.30e-20 | 89.0 |
Find 68 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTTTCCATTACTCATATT+TGG | 0.091095 | tig0021982:-41978 | None:intergenic |
| GTCTATTGGATCATTTATTT+AGG | 0.188617 | tig0021982:-40411 | None:intergenic |
| GATTGTGTTGAAGGAAAATA+AGG | 0.233658 | tig0021982:+42028 | Msa1396020:CDS |
| CGCAATTCATTGGGAGTGTT+TGG | 0.257412 | tig0021982:-40554 | None:intergenic |
| AAACAAGAGGCTAGCAGTTT+TGG | 0.263316 | tig0021982:+40517 | Msa1396020:CDS |
| GACACATTGGTGAAGCGTTT+TGG | 0.263796 | tig0021982:+40608 | Msa1396020:CDS |
| TCTATTGGATCATTTATTTA+GGG | 0.281702 | tig0021982:-40410 | None:intergenic |
| TGAATAAGCTTCAAGTCTAT+TGG | 0.294768 | tig0021982:-40425 | None:intergenic |
| GACTCATAGGGAATAGTCTT+TGG | 0.306736 | tig0021982:-41756 | None:intergenic |
| ATTGTTAGGCTTGCTCCTTT+TGG | 0.331058 | tig0021982:-41624 | None:intergenic |
| TATGCAACCACGCAATTCAT+TGG | 0.344858 | tig0021982:-40564 | None:intergenic |
| CTTCACCAATGTGTCCTTCA+TGG | 0.361633 | tig0021982:-40600 | None:intergenic |
| TTGTTGAAATATTGACTCAT+AGG | 0.364032 | tig0021982:-41769 | None:intergenic |
| ACCATATAGATTTGGACTTC+AGG | 0.392417 | tig0021982:+41583 | Msa1396020:intron |
| ATGAGTAATGGAAAGGCTTA+TGG | 0.405309 | tig0021982:+41984 | Msa1396020:CDS |
| ATCAGTGAGAAGCTGAATAT+TGG | 0.409562 | tig0021982:-40642 | None:intergenic |
| GAGAGGTTGTGGTGAAGGCT+AGG | 0.417467 | tig0021982:+42066 | Msa1396020:CDS |
| AAAAGGATGTCCATGTATCT+TGG | 0.422231 | tig0021982:-40798 | None:intergenic |
| AAGGCTAGGGATGTTCTAAA+AGG | 0.422802 | tig0021982:+42080 | Msa1396020:CDS |
| ATGTCCCATAAGGTTGCTTA+AGG | 0.429421 | tig0021982:+40337 | None:intergenic |
| TGCTGTTCAGATTGTGTTGA+AGG | 0.439367 | tig0021982:+42019 | Msa1396020:CDS |
| ATGCAACCACGCAATTCATT+GGG | 0.443326 | tig0021982:-40563 | None:intergenic |
| ATTATAGTGGACATGGAACT+AGG | 0.445716 | tig0021982:+40768 | Msa1396020:CDS |
| TAAACAAGCATTATCAAGAA+TGG | 0.451128 | tig0021982:+40709 | Msa1396020:CDS |
| TGTGACTTCAATCTTATCAC+TGG | 0.460452 | tig0021982:+40845 | Msa1396020:CDS |
| TAATAGAGAGGTTGTGGTGA+AGG | 0.466144 | tig0021982:+42061 | Msa1396020:CDS |
| CGGATGCAAGTTTGAGGTAT+CGG | 0.469444 | tig0021982:+41856 | Msa1396020:CDS |
| CTCAACAGAATCCCTTCATC+AGG | 0.469837 | tig0021982:-41918 | None:intergenic |
| ATGGTTGATCAAGCTGAAGC+AGG | 0.476621 | tig0021982:+40728 | Msa1396020:CDS |
| ATTAAGTAATAGAGAGGTTG+TGG | 0.478801 | tig0021982:+42055 | Msa1396020:CDS |
| AGCCAATAAAATGTCCCATA+AGG | 0.485786 | tig0021982:+40327 | None:intergenic |
| ATTGTGTTGAAGGAAAATAA+GGG | 0.489662 | tig0021982:+42029 | Msa1396020:CDS |
| TCTTCATCTACTATGCCAAC+TGG | 0.498050 | tig0021982:+40677 | Msa1396020:CDS |
| AGAGGTTGTGGTGAAGGCTA+GGG | 0.499556 | tig0021982:+42067 | Msa1396020:CDS |
| AACATAAACACAACAGACAT+TGG | 0.500486 | tig0021982:+41807 | Msa1396020:CDS |
| ATGAGTCCAAATATGAGTAA+TGG | 0.506659 | tig0021982:+41972 | Msa1396020:CDS |
| ACTTCAGGCAACTAGTGAAT+CGG | 0.509698 | tig0021982:+41598 | Msa1396020:CDS |
| ATAGCTTCTTCATGACGAAA+AGG | 0.518956 | tig0021982:-40815 | None:intergenic |
| TGTTGAAATATTGACTCATA+GGG | 0.521099 | tig0021982:-41768 | None:intergenic |
| TGTTTAATGTTAGCACCAGT+TGG | 0.522006 | tig0021982:-40692 | None:intergenic |
| AGCAAGCCTAACAATTCTCT+CGG | 0.533128 | tig0021982:+41632 | Msa1396020:CDS |
| GGTGGCAATTACATTCCTTG+TGG | 0.536320 | tig0021982:-40365 | None:intergenic |
| TCCAAATATGAGTAATGGAA+AGG | 0.539255 | tig0021982:+41977 | Msa1396020:CDS |
| TGGTTGATCAAGCTGAAGCA+GGG | 0.540137 | tig0021982:+40729 | Msa1396020:CDS |
| AAATGATGTGTTGGCCATGA+AGG | 0.544128 | tig0021982:+40586 | Msa1396020:CDS |
| CTAGTGAATCGGATTCCAAA+AGG | 0.548975 | tig0021982:+41609 | Msa1396020:CDS |
| GGGGAAATTAAGTAATAGAG+AGG | 0.549150 | tig0021982:+42049 | Msa1396020:CDS |
| CTCTCGGATTCATGTCATAG+TGG | 0.556554 | tig0021982:+41648 | Msa1396020:CDS |
| TGAAGAATTTGATGTGTATG+AGG | 0.558739 | tig0021982:+42208 | Msa1396020:three_prime_UTR |
| GTTCTGTTGAAACCTGATGA+AGG | 0.559735 | tig0021982:+41906 | Msa1396020:CDS |
| TTCTGTTGAAACCTGATGAA+GGG | 0.562927 | tig0021982:+41907 | Msa1396020:CDS |
| ATGAATCCGAGAGAATTGTT+AGG | 0.563126 | tig0021982:-41638 | None:intergenic |
| GGATGTCCATGTATCTTGGA+AGG | 0.564804 | tig0021982:-40794 | None:intergenic |
| GAAGTGATTGCAAACTGCAA+TGG | 0.564855 | tig0021982:+40487 | Msa1396020:exon |
| ACGTCACGCGATCTTGAAGA+AGG | 0.569985 | tig0021982:+41882 | Msa1396020:CDS |
| AGGATTCCTTCCAAGATACA+TGG | 0.572846 | tig0021982:+40788 | Msa1396020:CDS |
| TGATTGCAAACTGCAATGGA+AGG | 0.595196 | tig0021982:+40491 | Msa1396020:exon |
| TTGTGTTGAAGGAAAATAAG+GGG | 0.606126 | tig0021982:+42030 | Msa1396020:CDS |
| TCGGATTCATGTCATAGTGG+TGG | 0.629875 | tig0021982:+41651 | Msa1396020:CDS |
| TGGTTGCATAAATGATGTGT+TGG | 0.649661 | tig0021982:+40577 | Msa1396020:CDS |
| GGTTGATCAAGCTGAAGCAG+GGG | 0.657993 | tig0021982:+40730 | Msa1396020:CDS |
| AGGGATGTTCTAAAAGGACA+AGG | 0.659458 | tig0021982:+42086 | Msa1396020:CDS |
| GATGAAGGGATTCTGTTGAG+TGG | 0.664175 | tig0021982:+41921 | Msa1396020:CDS |
| AACACTCCCAATGAATTGCG+TGG | 0.668913 | tig0021982:+40557 | Msa1396020:CDS |
| GTGATAAGATTGAAGTCACA+AGG | 0.689446 | tig0021982:-40842 | None:intergenic |
| GTTGGCCATGAAGGACACAT+TGG | 0.700386 | tig0021982:+40595 | Msa1396020:CDS |
| TTGCTTAAGGAAAATCCACA+AGG | 0.703138 | tig0021982:+40350 | Msa1396020:five_prime_UTR |
| TCATCACTACAATAAAGACA+AGG | 0.723155 | tig0021982:-42122 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTTTTTTATATAGTTATTT+GGG | - | tig0021982:40390-40409 | None:intergenic | 10.0% |
| !!! | TTTTATATAAAATAAATGGA+AGG | + | tig0021982:42296-42315 | Msa1396020:three_prime_UTR | 10.0% |
| !!! | TCTTTTTTATATAGTTATTT+GGG | - | tig0021982:40390-40409 | None:intergenic | 10.0% |
| !!! | TTTTATATAAAATAAATGGA+AGG | + | tig0021982:42296-42315 | Msa1396020:three_prime_UTR | 10.0% |
| !!! | CTTTTTTATATAGTTATTTG+GGG | - | tig0021982:40389-40408 | None:intergenic | 15.0% |
| !!! | GTCTTTTTTATATAGTTATT+TGG | - | tig0021982:40391-40410 | None:intergenic | 15.0% |
| !! | AATTTAGTTACAAAATTGTA+GGG | + | tig0021982:40921-40940 | Msa1396020:intron | 15.0% |
| !!! | AGGATTTTTTTTAATCATTT+TGG | + | tig0021982:41070-41089 | Msa1396020:intron | 15.0% |
| !!! | TTTTTAATCATTTTGGAATT+TGG | + | tig0021982:41077-41096 | Msa1396020:intron | 15.0% |
| !!! | CATATACTAATAGATTTTTT+TGG | - | tig0021982:41339-41358 | None:intergenic | 15.0% |
| !!! | CTTTTTTATATAGTTATTTG+GGG | - | tig0021982:40389-40408 | None:intergenic | 15.0% |
| !!! | GTCTTTTTTATATAGTTATT+TGG | - | tig0021982:40391-40410 | None:intergenic | 15.0% |
| !! | AATTTAGTTACAAAATTGTA+GGG | + | tig0021982:40921-40940 | Msa1396020:intron | 15.0% |
| !!! | AGGATTTTTTTTAATCATTT+TGG | + | tig0021982:41070-41089 | Msa1396020:intron | 15.0% |
| !!! | TTTTTAATCATTTTGGAATT+TGG | + | tig0021982:41077-41096 | Msa1396020:intron | 15.0% |
| !!! | CATATACTAATAGATTTTTT+TGG | - | tig0021982:41339-41358 | None:intergenic | 15.0% |
| !! | TCTATTGGATCATTTATTTA+GGG | - | tig0021982:40413-40432 | None:intergenic | 20.0% |
| !!! | CTACAATTTTGTAACTAAAT+TGG | - | tig0021982:40922-40941 | None:intergenic | 20.0% |
| !! | CAATTTAGTTACAAAATTGT+AGG | + | tig0021982:40920-40939 | Msa1396020:intron | 20.0% |
| !!! | CTTAAAATGATTGATTTGAA+AGG | - | tig0021982:41031-41050 | None:intergenic | 20.0% |
| !!! | ATTTTAATGACTAAATTGTG+TGG | + | tig0021982:41103-41122 | Msa1396020:intron | 20.0% |
| !! | ATCTTAAATTAACCAAATGT+AGG | - | tig0021982:41130-41149 | None:intergenic | 20.0% |
| !! | TATTGCATAGTTAAAACTAT+GGG | - | tig0021982:41260-41279 | None:intergenic | 20.0% |
| !! | TTATTGCATAGTTAAAACTA+TGG | - | tig0021982:41261-41280 | None:intergenic | 20.0% |
| !! | TCTAATTCTATATGGTATTT+GGG | - | tig0021982:41519-41538 | None:intergenic | 20.0% |
| !! | TTCTAATTCTATATGGTATT+TGG | - | tig0021982:41520-41539 | None:intergenic | 20.0% |
| !! | TCTATTGGATCATTTATTTA+GGG | - | tig0021982:40413-40432 | None:intergenic | 20.0% |
| !!! | CTACAATTTTGTAACTAAAT+TGG | - | tig0021982:40922-40941 | None:intergenic | 20.0% |
| !! | CAATTTAGTTACAAAATTGT+AGG | + | tig0021982:40920-40939 | Msa1396020:intron | 20.0% |
| !!! | CTTAAAATGATTGATTTGAA+AGG | - | tig0021982:41031-41050 | None:intergenic | 20.0% |
| !!! | ATTTTAATGACTAAATTGTG+TGG | + | tig0021982:41103-41122 | Msa1396020:intron | 20.0% |
| !! | ATCTTAAATTAACCAAATGT+AGG | - | tig0021982:41130-41149 | None:intergenic | 20.0% |
| !! | TATTGCATAGTTAAAACTAT+GGG | - | tig0021982:41260-41279 | None:intergenic | 20.0% |
| !! | TTATTGCATAGTTAAAACTA+TGG | - | tig0021982:41261-41280 | None:intergenic | 20.0% |
| !! | TCTAATTCTATATGGTATTT+GGG | - | tig0021982:41519-41538 | None:intergenic | 20.0% |
| !! | TTCTAATTCTATATGGTATT+TGG | - | tig0021982:41520-41539 | None:intergenic | 20.0% |
| !! | TTTTATATAGTTATTTGGGG+TGG | - | tig0021982:40386-40405 | None:intergenic | 25.0% |
| ! | GTCTATTGGATCATTTATTT+AGG | - | tig0021982:40414-40433 | None:intergenic | 25.0% |
| ! | TAAACAAGCATTATCAAGAA+TGG | + | tig0021982:40709-40728 | Msa1396020:CDS | 25.0% |
| !!! | GTGCTTTATTTTCATTATAG+TGG | + | tig0021982:40755-40774 | Msa1396020:CDS | 25.0% |
| !!! | TATTTTCATTATAGTGGACA+TGG | + | tig0021982:40761-40780 | Msa1396020:CDS | 25.0% |
| ! | GTTCATAAATAATGTGATTG+AGG | + | tig0021982:41050-41069 | Msa1396020:intron | 25.0% |
| !! | CTACATTAACATACTGTTTT+GGG | - | tig0021982:41234-41253 | None:intergenic | 25.0% |
| !! | ACTACATTAACATACTGTTT+TGG | - | tig0021982:41235-41254 | None:intergenic | 25.0% |
| ! | ATTGCATAGTTAAAACTATG+GGG | - | tig0021982:41259-41278 | None:intergenic | 25.0% |
| !!! | TTTTTTGGTAAGATCAACAT+AGG | - | tig0021982:41324-41343 | None:intergenic | 25.0% |
| !! | TTAACAATTTTGTTGAATGC+TGG | - | tig0021982:41363-41382 | None:intergenic | 25.0% |
| ! | GCATAGTTTCTAATTCTATA+TGG | - | tig0021982:41527-41546 | None:intergenic | 25.0% |
| ! | TGTCATATACCATATAGATT+TGG | + | tig0021982:41575-41594 | Msa1396020:intron | 25.0% |
| ! | GACAAAGAAAAAGAACAAAT+TGG | + | tig0021982:41681-41700 | Msa1396020:CDS | 25.0% |
| !!! | TGTTGAAATATTGACTCATA+GGG | - | tig0021982:41771-41790 | None:intergenic | 25.0% |
| !!! | TTGTTGAAATATTGACTCAT+AGG | - | tig0021982:41772-41791 | None:intergenic | 25.0% |
| ! | ATTGTGTTGAAGGAAAATAA+GGG | + | tig0021982:42029-42048 | Msa1396020:CDS | 25.0% |
| !!! | TGGAAGGAAATTTTAATTCA+TGG | + | tig0021982:42312-42331 | Msa1396020:three_prime_UTR | 25.0% |
| !! | TTTTATATAGTTATTTGGGG+TGG | - | tig0021982:40386-40405 | None:intergenic | 25.0% |
| ! | GTCTATTGGATCATTTATTT+AGG | - | tig0021982:40414-40433 | None:intergenic | 25.0% |
| ! | TAAACAAGCATTATCAAGAA+TGG | + | tig0021982:40709-40728 | Msa1396020:CDS | 25.0% |
| !!! | GTGCTTTATTTTCATTATAG+TGG | + | tig0021982:40755-40774 | Msa1396020:CDS | 25.0% |
| !!! | TATTTTCATTATAGTGGACA+TGG | + | tig0021982:40761-40780 | Msa1396020:CDS | 25.0% |
| ! | GTTCATAAATAATGTGATTG+AGG | + | tig0021982:41050-41069 | Msa1396020:intron | 25.0% |
| !! | CTACATTAACATACTGTTTT+GGG | - | tig0021982:41234-41253 | None:intergenic | 25.0% |
| !! | ACTACATTAACATACTGTTT+TGG | - | tig0021982:41235-41254 | None:intergenic | 25.0% |
| ! | ATTGCATAGTTAAAACTATG+GGG | - | tig0021982:41259-41278 | None:intergenic | 25.0% |
| !!! | TTTTTTGGTAAGATCAACAT+AGG | - | tig0021982:41324-41343 | None:intergenic | 25.0% |
| !! | TTAACAATTTTGTTGAATGC+TGG | - | tig0021982:41363-41382 | None:intergenic | 25.0% |
| ! | GCATAGTTTCTAATTCTATA+TGG | - | tig0021982:41527-41546 | None:intergenic | 25.0% |
| ! | TGTCATATACCATATAGATT+TGG | + | tig0021982:41575-41594 | Msa1396020:intron | 25.0% |
| ! | GACAAAGAAAAAGAACAAAT+TGG | + | tig0021982:41681-41700 | Msa1396020:CDS | 25.0% |
| !!! | TGTTGAAATATTGACTCATA+GGG | - | tig0021982:41771-41790 | None:intergenic | 25.0% |
| !!! | TTGTTGAAATATTGACTCAT+AGG | - | tig0021982:41772-41791 | None:intergenic | 25.0% |
| ! | ATTGTGTTGAAGGAAAATAA+GGG | + | tig0021982:42029-42048 | Msa1396020:CDS | 25.0% |
| ! | TTTTCCTTAAGCAACCTTAT+GGG | - | tig0021982:40344-40363 | None:intergenic | 30.0% |
| ! | ATTTTCCTTAAGCAACCTTA+TGG | - | tig0021982:40345-40364 | None:intergenic | 30.0% |
| TGAATAAGCTTCAAGTCTAT+TGG | - | tig0021982:40428-40447 | None:intergenic | 30.0% | |
| ! | ATAGTAGATGAAGAGCTTTT+AGG | - | tig0021982:40671-40690 | None:intergenic | 30.0% |
| ACAACATAAGCTACATCAAA+CGG | - | tig0021982:40885-40904 | None:intergenic | 30.0% | |
| !! | GTTCTTTTTCTTTGTCGATT+AGG | - | tig0021982:41677-41696 | None:intergenic | 30.0% |
| AACATAAACACAACAGACAT+TGG | + | tig0021982:41807-41826 | Msa1396020:CDS | 30.0% | |
| ATGAGTCCAAATATGAGTAA+TGG | + | tig0021982:41972-41991 | Msa1396020:CDS | 30.0% | |
| ! | TCCAAATATGAGTAATGGAA+AGG | + | tig0021982:41977-41996 | Msa1396020:CDS | 30.0% |
| GATTGTGTTGAAGGAAAATA+AGG | + | tig0021982:42028-42047 | Msa1396020:CDS | 30.0% | |
| TTGTGTTGAAGGAAAATAAG+GGG | + | tig0021982:42030-42049 | Msa1396020:CDS | 30.0% | |
| ATTAAGTAATAGAGAGGTTG+TGG | + | tig0021982:42055-42074 | Msa1396020:CDS | 30.0% | |
| TCATCACTACAATAAAGACA+AGG | - | tig0021982:42125-42144 | None:intergenic | 30.0% | |
| TGAAGAATTTGATGTGTATG+AGG | + | tig0021982:42208-42227 | Msa1396020:three_prime_UTR | 30.0% | |
| ! | TTTTCCTTAAGCAACCTTAT+GGG | - | tig0021982:40344-40363 | None:intergenic | 30.0% |
| ! | ATTTTCCTTAAGCAACCTTA+TGG | - | tig0021982:40345-40364 | None:intergenic | 30.0% |
| TGAATAAGCTTCAAGTCTAT+TGG | - | tig0021982:40428-40447 | None:intergenic | 30.0% | |
| ! | ATAGTAGATGAAGAGCTTTT+AGG | - | tig0021982:40671-40690 | None:intergenic | 30.0% |
| ACAACATAAGCTACATCAAA+CGG | - | tig0021982:40885-40904 | None:intergenic | 30.0% | |
| !! | GTTCTTTTTCTTTGTCGATT+AGG | - | tig0021982:41677-41696 | None:intergenic | 30.0% |
| AACATAAACACAACAGACAT+TGG | + | tig0021982:41807-41826 | Msa1396020:CDS | 30.0% | |
| ATGAGTCCAAATATGAGTAA+TGG | + | tig0021982:41972-41991 | Msa1396020:CDS | 30.0% | |
| ! | TCCAAATATGAGTAATGGAA+AGG | + | tig0021982:41977-41996 | Msa1396020:CDS | 30.0% |
| GATTGTGTTGAAGGAAAATA+AGG | + | tig0021982:42028-42047 | Msa1396020:CDS | 30.0% | |
| TTGTGTTGAAGGAAAATAAG+GGG | + | tig0021982:42030-42049 | Msa1396020:CDS | 30.0% | |
| ATTAAGTAATAGAGAGGTTG+TGG | + | tig0021982:42055-42074 | Msa1396020:CDS | 30.0% | |
| TCATCACTACAATAAAGACA+AGG | - | tig0021982:42125-42144 | None:intergenic | 30.0% | |
| TGAAGAATTTGATGTGTATG+AGG | + | tig0021982:42208-42227 | Msa1396020:three_prime_UTR | 30.0% | |
| TTGCTTAAGGAAAATCCACA+AGG | + | tig0021982:40350-40369 | Msa1396020:five_prime_UTR | 35.0% | |
| CAATGGAAGGAAAAAACAAG+AGG | + | tig0021982:40504-40523 | Msa1396020:exon | 35.0% | |
| TGGTTGCATAAATGATGTGT+TGG | + | tig0021982:40577-40596 | Msa1396020:CDS | 35.0% | |
| ATCAGTGAGAAGCTGAATAT+TGG | - | tig0021982:40645-40664 | None:intergenic | 35.0% | |
| TGTTTAATGTTAGCACCAGT+TGG | - | tig0021982:40695-40714 | None:intergenic | 35.0% | |
| !! | ATTATAGTGGACATGGAACT+AGG | + | tig0021982:40768-40787 | Msa1396020:CDS | 35.0% |
| AAAAGGATGTCCATGTATCT+TGG | - | tig0021982:40801-40820 | None:intergenic | 35.0% | |
| ATAGCTTCTTCATGACGAAA+AGG | - | tig0021982:40818-40837 | None:intergenic | 35.0% | |
| GTGATAAGATTGAAGTCACA+AGG | - | tig0021982:40845-40864 | None:intergenic | 35.0% | |
| TGTGACTTCAATCTTATCAC+TGG | + | tig0021982:40845-40864 | Msa1396020:CDS | 35.0% | |
| CAACATAAGCTACATCAAAC+GGG | - | tig0021982:40884-40903 | None:intergenic | 35.0% | |
| AAATTGTGTGGTCCTACATT+TGG | + | tig0021982:41115-41134 | Msa1396020:intron | 35.0% | |
| ACCATATAGATTTGGACTTC+AGG | + | tig0021982:41583-41602 | Msa1396020:intron | 35.0% | |
| ATGAATCCGAGAGAATTGTT+AGG | - | tig0021982:41641-41660 | None:intergenic | 35.0% | |
| ! | TTTTTGTCATCAAACGAGGA+TGG | - | tig0021982:41708-41727 | None:intergenic | 35.0% |
| ! | TCCTCGTTTGATGACAAAAA+TGG | + | tig0021982:41708-41727 | Msa1396020:CDS | 35.0% |
| ! | ACTCATCTCCTTGAGTTTTT+CGG | + | tig0021982:41831-41850 | Msa1396020:CDS | 35.0% |
| TTCTGTTGAAACCTGATGAA+GGG | + | tig0021982:41907-41926 | Msa1396020:CDS | 35.0% | |
| GCCTTTCCATTACTCATATT+TGG | - | tig0021982:41981-42000 | None:intergenic | 35.0% | |
| ! | ATGAGTAATGGAAAGGCTTA+TGG | + | tig0021982:41984-42003 | Msa1396020:CDS | 35.0% |
| GGGGAAATTAAGTAATAGAG+AGG | + | tig0021982:42049-42068 | Msa1396020:CDS | 35.0% | |
| TTGCTTAAGGAAAATCCACA+AGG | + | tig0021982:40350-40369 | Msa1396020:five_prime_UTR | 35.0% | |
| CAATGGAAGGAAAAAACAAG+AGG | + | tig0021982:40504-40523 | Msa1396020:exon | 35.0% | |
| TGGTTGCATAAATGATGTGT+TGG | + | tig0021982:40577-40596 | Msa1396020:CDS | 35.0% | |
| ATCAGTGAGAAGCTGAATAT+TGG | - | tig0021982:40645-40664 | None:intergenic | 35.0% | |
| TGTTTAATGTTAGCACCAGT+TGG | - | tig0021982:40695-40714 | None:intergenic | 35.0% | |
| !! | ATTATAGTGGACATGGAACT+AGG | + | tig0021982:40768-40787 | Msa1396020:CDS | 35.0% |
| AAAAGGATGTCCATGTATCT+TGG | - | tig0021982:40801-40820 | None:intergenic | 35.0% | |
| ATAGCTTCTTCATGACGAAA+AGG | - | tig0021982:40818-40837 | None:intergenic | 35.0% | |
| GTGATAAGATTGAAGTCACA+AGG | - | tig0021982:40845-40864 | None:intergenic | 35.0% | |
| TGTGACTTCAATCTTATCAC+TGG | + | tig0021982:40845-40864 | Msa1396020:CDS | 35.0% | |
| CAACATAAGCTACATCAAAC+GGG | - | tig0021982:40884-40903 | None:intergenic | 35.0% | |
| AAATTGTGTGGTCCTACATT+TGG | + | tig0021982:41115-41134 | Msa1396020:intron | 35.0% | |
| ACCATATAGATTTGGACTTC+AGG | + | tig0021982:41583-41602 | Msa1396020:intron | 35.0% | |
| ATGAATCCGAGAGAATTGTT+AGG | - | tig0021982:41641-41660 | None:intergenic | 35.0% | |
| ! | TTTTTGTCATCAAACGAGGA+TGG | - | tig0021982:41708-41727 | None:intergenic | 35.0% |
| ! | TCCTCGTTTGATGACAAAAA+TGG | + | tig0021982:41708-41727 | Msa1396020:CDS | 35.0% |
| ! | ACTCATCTCCTTGAGTTTTT+CGG | + | tig0021982:41831-41850 | Msa1396020:CDS | 35.0% |
| TTCTGTTGAAACCTGATGAA+GGG | + | tig0021982:41907-41926 | Msa1396020:CDS | 35.0% | |
| GCCTTTCCATTACTCATATT+TGG | - | tig0021982:41981-42000 | None:intergenic | 35.0% | |
| ! | ATGAGTAATGGAAAGGCTTA+TGG | + | tig0021982:41984-42003 | Msa1396020:CDS | 35.0% |
| GGGGAAATTAAGTAATAGAG+AGG | + | tig0021982:42049-42068 | Msa1396020:CDS | 35.0% | |
| GAAGTGATTGCAAACTGCAA+TGG | + | tig0021982:40487-40506 | Msa1396020:exon | 40.0% | |
| TGATTGCAAACTGCAATGGA+AGG | + | tig0021982:40491-40510 | Msa1396020:exon | 40.0% | |
| ! | AAACAAGAGGCTAGCAGTTT+TGG | + | tig0021982:40517-40536 | Msa1396020:CDS | 40.0% |
| ATGCAACCACGCAATTCATT+GGG | - | tig0021982:40566-40585 | None:intergenic | 40.0% | |
| TATGCAACCACGCAATTCAT+TGG | - | tig0021982:40567-40586 | None:intergenic | 40.0% | |
| ! | AAATGATGTGTTGGCCATGA+AGG | + | tig0021982:40586-40605 | Msa1396020:CDS | 40.0% |
| !! | ACACATTGGTGAAGCGTTTT+GGG | + | tig0021982:40609-40628 | Msa1396020:CDS | 40.0% |
| TCTTCATCTACTATGCCAAC+TGG | + | tig0021982:40677-40696 | Msa1396020:CDS | 40.0% | |
| AGGATTCCTTCCAAGATACA+TGG | + | tig0021982:40788-40807 | Msa1396020:CDS | 40.0% | |
| ATCAACCGATCAAGACGATT+TGG | + | tig0021982:40944-40963 | Msa1396020:intron | 40.0% | |
| TACCACCAAATCGTCTTGAT+CGG | - | tig0021982:40952-40971 | None:intergenic | 40.0% | |
| GCCTGAAGTCCAAATCTATA+TGG | - | tig0021982:41587-41606 | None:intergenic | 40.0% | |
| ACTTCAGGCAACTAGTGAAT+CGG | + | tig0021982:41598-41617 | Msa1396020:CDS | 40.0% | |
| CTAGTGAATCGGATTCCAAA+AGG | + | tig0021982:41609-41628 | Msa1396020:CDS | 40.0% | |
| !! | ATTGTTAGGCTTGCTCCTTT+TGG | - | tig0021982:41627-41646 | None:intergenic | 40.0% |
| AGCAAGCCTAACAATTCTCT+CGG | + | tig0021982:41632-41651 | Msa1396020:CDS | 40.0% | |
| !!! | GCCATTTTTGTCATCAAACG+AGG | - | tig0021982:41712-41731 | None:intergenic | 40.0% |
| GACTCATAGGGAATAGTCTT+TGG | - | tig0021982:41759-41778 | None:intergenic | 40.0% | |
| GTTCTGTTGAAACCTGATGA+AGG | + | tig0021982:41906-41925 | Msa1396020:CDS | 40.0% | |
| TGCTGTTCAGATTGTGTTGA+AGG | + | tig0021982:42019-42038 | Msa1396020:CDS | 40.0% | |
| TAATAGAGAGGTTGTGGTGA+AGG | + | tig0021982:42061-42080 | Msa1396020:CDS | 40.0% | |
| ! | AAGGCTAGGGATGTTCTAAA+AGG | + | tig0021982:42080-42099 | Msa1396020:CDS | 40.0% |
| !! | AGGGATGTTCTAAAAGGACA+AGG | + | tig0021982:42086-42105 | Msa1396020:CDS | 40.0% |
| GAAGTGATTGCAAACTGCAA+TGG | + | tig0021982:40487-40506 | Msa1396020:exon | 40.0% | |
| TGATTGCAAACTGCAATGGA+AGG | + | tig0021982:40491-40510 | Msa1396020:exon | 40.0% | |
| ! | AAACAAGAGGCTAGCAGTTT+TGG | + | tig0021982:40517-40536 | Msa1396020:CDS | 40.0% |
| ATGCAACCACGCAATTCATT+GGG | - | tig0021982:40566-40585 | None:intergenic | 40.0% | |
| TATGCAACCACGCAATTCAT+TGG | - | tig0021982:40567-40586 | None:intergenic | 40.0% | |
| ! | AAATGATGTGTTGGCCATGA+AGG | + | tig0021982:40586-40605 | Msa1396020:CDS | 40.0% |
| !! | ACACATTGGTGAAGCGTTTT+GGG | + | tig0021982:40609-40628 | Msa1396020:CDS | 40.0% |
| TCTTCATCTACTATGCCAAC+TGG | + | tig0021982:40677-40696 | Msa1396020:CDS | 40.0% | |
| AGGATTCCTTCCAAGATACA+TGG | + | tig0021982:40788-40807 | Msa1396020:CDS | 40.0% | |
| ATCAACCGATCAAGACGATT+TGG | + | tig0021982:40944-40963 | Msa1396020:intron | 40.0% | |
| TACCACCAAATCGTCTTGAT+CGG | - | tig0021982:40952-40971 | None:intergenic | 40.0% | |
| GCCTGAAGTCCAAATCTATA+TGG | - | tig0021982:41587-41606 | None:intergenic | 40.0% | |
| ACTTCAGGCAACTAGTGAAT+CGG | + | tig0021982:41598-41617 | Msa1396020:CDS | 40.0% | |
| CTAGTGAATCGGATTCCAAA+AGG | + | tig0021982:41609-41628 | Msa1396020:CDS | 40.0% | |
| !! | ATTGTTAGGCTTGCTCCTTT+TGG | - | tig0021982:41627-41646 | None:intergenic | 40.0% |
| AGCAAGCCTAACAATTCTCT+CGG | + | tig0021982:41632-41651 | Msa1396020:CDS | 40.0% | |
| !!! | GCCATTTTTGTCATCAAACG+AGG | - | tig0021982:41712-41731 | None:intergenic | 40.0% |
| GACTCATAGGGAATAGTCTT+TGG | - | tig0021982:41759-41778 | None:intergenic | 40.0% | |
| GTTCTGTTGAAACCTGATGA+AGG | + | tig0021982:41906-41925 | Msa1396020:CDS | 40.0% | |
| TGCTGTTCAGATTGTGTTGA+AGG | + | tig0021982:42019-42038 | Msa1396020:CDS | 40.0% | |
| TAATAGAGAGGTTGTGGTGA+AGG | + | tig0021982:42061-42080 | Msa1396020:CDS | 40.0% | |
| ! | AAGGCTAGGGATGTTCTAAA+AGG | + | tig0021982:42080-42099 | Msa1396020:CDS | 40.0% |
| !! | AGGGATGTTCTAAAAGGACA+AGG | + | tig0021982:42086-42105 | Msa1396020:CDS | 40.0% |
| GGTGGCAATTACATTCCTTG+TGG | - | tig0021982:40368-40387 | None:intergenic | 45.0% | |
| !! | AAGAGGCTAGCAGTTTTGGT+AGG | + | tig0021982:40521-40540 | Msa1396020:CDS | 45.0% |
| !! | CGCAATTCATTGGGAGTGTT+TGG | - | tig0021982:40557-40576 | None:intergenic | 45.0% |
| AACACTCCCAATGAATTGCG+TGG | + | tig0021982:40557-40576 | Msa1396020:CDS | 45.0% | |
| CTTCACCAATGTGTCCTTCA+TGG | - | tig0021982:40603-40622 | None:intergenic | 45.0% | |
| !! | GACACATTGGTGAAGCGTTT+TGG | + | tig0021982:40608-40627 | Msa1396020:CDS | 45.0% |
| ATGGTTGATCAAGCTGAAGC+AGG | + | tig0021982:40728-40747 | Msa1396020:CDS | 45.0% | |
| TGGTTGATCAAGCTGAAGCA+GGG | + | tig0021982:40729-40748 | Msa1396020:CDS | 45.0% | |
| GGATGTCCATGTATCTTGGA+AGG | - | tig0021982:40797-40816 | None:intergenic | 45.0% | |
| ! | AACCGATCAAGACGATTTGG+TGG | + | tig0021982:40947-40966 | Msa1396020:intron | 45.0% |
| CTCTCGGATTCATGTCATAG+TGG | + | tig0021982:41648-41667 | Msa1396020:CDS | 45.0% | |
| TCGGATTCATGTCATAGTGG+TGG | + | tig0021982:41651-41670 | Msa1396020:CDS | 45.0% | |
| !! | TCTCCTTGAGTTTTTCGGCT+CGG | + | tig0021982:41836-41855 | Msa1396020:CDS | 45.0% |
| ! | CGGATGCAAGTTTGAGGTAT+CGG | + | tig0021982:41856-41875 | Msa1396020:CDS | 45.0% |
| CTCAACAGAATCCCTTCATC+AGG | - | tig0021982:41921-41940 | None:intergenic | 45.0% | |
| GATGAAGGGATTCTGTTGAG+TGG | + | tig0021982:41921-41940 | Msa1396020:CDS | 45.0% | |
| GGTGGCAATTACATTCCTTG+TGG | - | tig0021982:40368-40387 | None:intergenic | 45.0% | |
| !! | AAGAGGCTAGCAGTTTTGGT+AGG | + | tig0021982:40521-40540 | Msa1396020:CDS | 45.0% |
| !! | CGCAATTCATTGGGAGTGTT+TGG | - | tig0021982:40557-40576 | None:intergenic | 45.0% |
| AACACTCCCAATGAATTGCG+TGG | + | tig0021982:40557-40576 | Msa1396020:CDS | 45.0% | |
| CTTCACCAATGTGTCCTTCA+TGG | - | tig0021982:40603-40622 | None:intergenic | 45.0% | |
| !! | GACACATTGGTGAAGCGTTT+TGG | + | tig0021982:40608-40627 | Msa1396020:CDS | 45.0% |
| ATGGTTGATCAAGCTGAAGC+AGG | + | tig0021982:40728-40747 | Msa1396020:CDS | 45.0% | |
| TGGTTGATCAAGCTGAAGCA+GGG | + | tig0021982:40729-40748 | Msa1396020:CDS | 45.0% | |
| GGATGTCCATGTATCTTGGA+AGG | - | tig0021982:40797-40816 | None:intergenic | 45.0% | |
| ! | AACCGATCAAGACGATTTGG+TGG | + | tig0021982:40947-40966 | Msa1396020:intron | 45.0% |
| CTCTCGGATTCATGTCATAG+TGG | + | tig0021982:41648-41667 | Msa1396020:CDS | 45.0% | |
| TCGGATTCATGTCATAGTGG+TGG | + | tig0021982:41651-41670 | Msa1396020:CDS | 45.0% | |
| !! | TCTCCTTGAGTTTTTCGGCT+CGG | + | tig0021982:41836-41855 | Msa1396020:CDS | 45.0% |
| ! | CGGATGCAAGTTTGAGGTAT+CGG | + | tig0021982:41856-41875 | Msa1396020:CDS | 45.0% |
| CTCAACAGAATCCCTTCATC+AGG | - | tig0021982:41921-41940 | None:intergenic | 45.0% | |
| GATGAAGGGATTCTGTTGAG+TGG | + | tig0021982:41921-41940 | Msa1396020:CDS | 45.0% | |
| !!! | TGAATTTTATATAAAATAAA+TGG | + | tig0021982:42292-42311 | Msa1396020:three_prime_UTR | 5.0% |
| !!! | TGAATTTTATATAAAATAAA+TGG | + | tig0021982:42292-42311 | Msa1396020:three_prime_UTR | 5.0% |
| GTTGGCCATGAAGGACACAT+TGG | + | tig0021982:40595-40614 | Msa1396020:CDS | 50.0% | |
| GGTTGATCAAGCTGAAGCAG+GGG | + | tig0021982:40730-40749 | Msa1396020:CDS | 50.0% | |
| CATCCGAGCCGAAAAACTCA+AGG | - | tig0021982:41842-41861 | None:intergenic | 50.0% | |
| ACGTCACGCGATCTTGAAGA+AGG | + | tig0021982:41882-41901 | Msa1396020:CDS | 50.0% | |
| AGAGGTTGTGGTGAAGGCTA+GGG | + | tig0021982:42067-42086 | Msa1396020:CDS | 50.0% | |
| GTTGGCCATGAAGGACACAT+TGG | + | tig0021982:40595-40614 | Msa1396020:CDS | 50.0% | |
| GGTTGATCAAGCTGAAGCAG+GGG | + | tig0021982:40730-40749 | Msa1396020:CDS | 50.0% | |
| CATCCGAGCCGAAAAACTCA+AGG | - | tig0021982:41842-41861 | None:intergenic | 50.0% | |
| ACGTCACGCGATCTTGAAGA+AGG | + | tig0021982:41882-41901 | Msa1396020:CDS | 50.0% | |
| AGAGGTTGTGGTGAAGGCTA+GGG | + | tig0021982:42067-42086 | Msa1396020:CDS | 50.0% | |
| !! | TCGGCTCGGATGCAAGTTTG+AGG | + | tig0021982:41850-41869 | Msa1396020:CDS | 55.0% |
| GAGAGGTTGTGGTGAAGGCT+AGG | + | tig0021982:42066-42085 | Msa1396020:CDS | 55.0% | |
| !! | TCGGCTCGGATGCAAGTTTG+AGG | + | tig0021982:41850-41869 | Msa1396020:CDS | 55.0% |
| GAGAGGTTGTGGTGAAGGCT+AGG | + | tig0021982:42066-42085 | Msa1396020:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021982 | gene | 40339 | 42333 | 40339 | ID=Msa1396020;Name=Msa1396020 |
| tig0021982 | mRNA | 40339 | 42333 | 40339 | ID=Msa1396020-mRNA-1;Parent=Msa1396020;Name=Msa1396020-mRNA-1;_AED=0.00;_eAED=0.00;_QI=167|1|1|1|1|1|2|155|315 |
| tig0021982 | exon | 40339 | 40866 | 40339 | ID=Msa1396020-mRNA-1:exon:15212;Parent=Msa1396020-mRNA-1 |
| tig0021982 | exon | 41592 | 42333 | 41592 | ID=Msa1396020-mRNA-1:exon:15213;Parent=Msa1396020-mRNA-1 |
| tig0021982 | five_prime_UTR | 40339 | 40505 | 40339 | ID=Msa1396020-mRNA-1:five_prime_utr;Parent=Msa1396020-mRNA-1 |
| tig0021982 | CDS | 40506 | 40866 | 40506 | ID=Msa1396020-mRNA-1:cds;Parent=Msa1396020-mRNA-1 |
| tig0021982 | CDS | 41592 | 42178 | 41592 | ID=Msa1396020-mRNA-1:cds;Parent=Msa1396020-mRNA-1 |
| tig0021982 | three_prime_UTR | 42179 | 42333 | 42179 | ID=Msa1396020-mRNA-1:three_prime_utr;Parent=Msa1396020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
