Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1254370 | XP_003629259.1 | 93.626 | 455 | 23 | 3 | 1 | 450 | 1 | 454 | 0.0 | 769 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1254370 | sp|Q94K80|LRP1C_ARATH | 35.500 | 400 | 195 | 17 | 37 | 408 | 86 | 450 | 4.89e-47 | 172 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013050 | Msa1254370 | 0.871894 | 4.824141e-67 | -8.615850e-47 |
| Msa0024210 | Msa1254370 | 0.802107 | 6.564435e-49 | -8.615850e-47 |
| Msa0036220 | Msa1254370 | 0.835432 | 1.684064e-56 | -8.615850e-47 |
| Msa0037570 | Msa1254370 | 0.804794 | 1.820344e-49 | -8.615850e-47 |
| Msa0039330 | Msa1254370 | -0.816809 | 4.565406e-52 | -8.615850e-47 |
| Msa0049650 | Msa1254370 | 0.830705 | 2.526387e-55 | -8.615850e-47 |
| Msa0054730 | Msa1254370 | 0.857904 | 1.187395e-62 | -8.615850e-47 |
| Msa0057680 | Msa1254370 | 0.815401 | 9.419519e-52 | -8.615850e-47 |
| Msa0058210 | Msa1254370 | 0.810943 | 8.964433e-51 | -8.615850e-47 |
| Msa0074950 | Msa1254370 | 0.860986 | 1.408391e-63 | -8.615850e-47 |
| Msa0076320 | Msa1254370 | -0.819414 | 1.176363e-52 | -8.615850e-47 |
| Msa0090770 | Msa1254370 | 0.814783 | 1.292178e-51 | -8.615850e-47 |
| Msa0092990 | Msa1254370 | -0.823986 | 1.030812e-53 | -8.615850e-47 |
| Msa0106370 | Msa1254370 | 0.830874 | 2.296862e-55 | -8.615850e-47 |
| Msa0112710 | Msa1254370 | 0.803430 | 3.498884e-49 | -8.615850e-47 |
| Msa0119850 | Msa1254370 | -0.802772 | 4.786125e-49 | -8.615850e-47 |
| Msa0605170 | Msa1254370 | -0.830182 | 3.390924e-55 | -8.615850e-47 |
| Msa0607340 | Msa1254370 | 0.865003 | 8.093230e-65 | -8.615850e-47 |
| Msa0608710 | Msa1254370 | -0.806171 | 9.364280e-50 | -8.615850e-47 |
| Msa0610430 | Msa1254370 | -0.812274 | 4.603962e-51 | -8.615850e-47 |
| Msa0623790 | Msa1254370 | -0.802306 | 5.971166e-49 | -8.615850e-47 |
| Msa0625530 | Msa1254370 | 0.807269 | 5.489072e-50 | -8.615850e-47 |
| Msa0626090 | Msa1254370 | -0.811030 | 8.584189e-51 | -8.615850e-47 |
| Msa0643560 | Msa1254370 | -0.803071 | 4.151670e-49 | -8.615850e-47 |
| Msa0647450 | Msa1254370 | 0.855335 | 6.759891e-62 | -8.615850e-47 |
| Msa0661190 | Msa1254370 | 0.889437 | 2.423659e-73 | -8.615850e-47 |
| Msa0662650 | Msa1254370 | -0.816660 | 4.932746e-52 | -8.615850e-47 |
| Msa0682840 | Msa1254370 | -0.814346 | 1.614511e-51 | -8.615850e-47 |
| Msa0708860 | Msa1254370 | -0.814013 | 1.911851e-51 | -8.615850e-47 |
| Msa0831870 | Msa1254370 | -0.802214 | 6.239845e-49 | -8.615850e-47 |
| Msa0129190 | Msa1254370 | 0.808236 | 3.419409e-50 | -8.615850e-47 |
| Msa0134110 | Msa1254370 | 0.816574 | 5.155612e-52 | -8.615850e-47 |
| Msa0147250 | Msa1254370 | -0.804609 | 1.989770e-49 | -8.615850e-47 |
| Msa0148120 | Msa1254370 | -0.802134 | 6.480015e-49 | -8.615850e-47 |
| Msa0150800 | Msa1254370 | -0.806751 | 7.064360e-50 | -8.615850e-47 |
| Msa0156650 | Msa1254370 | 0.800668 | 1.293562e-48 | -8.615850e-47 |
| Msa0160550 | Msa1254370 | -0.803388 | 3.569799e-49 | -8.615850e-47 |
| Msa0162770 | Msa1254370 | 0.855239 | 7.207709e-62 | -8.615850e-47 |
| Msa0169140 | Msa1254370 | 0.820312 | 7.330866e-53 | -8.615850e-47 |
| Msa0180990 | Msa1254370 | 0.808188 | 3.500652e-50 | -8.615850e-47 |
| Msa0183640 | Msa1254370 | 0.823325 | 1.472221e-53 | -8.615850e-47 |
| Msa0229490 | Msa1254370 | 0.808025 | 3.793276e-50 | -8.615850e-47 |
| Msa1245940 | Msa1254370 | 0.812644 | 3.821041e-51 | -8.615850e-47 |
| Msa1249640 | Msa1254370 | 0.989868 | 5.256771e-180 | -8.615850e-47 |
| Msa1253930 | Msa1254370 | 0.808250 | 3.396241e-50 | -8.615850e-47 |
| Msa1254370 | Msa1259070 | 0.809672 | 1.685293e-50 | -8.615850e-47 |
| Msa1254370 | Msa1259490 | 0.806860 | 6.700878e-50 | -8.615850e-47 |
| Msa1254370 | Msa1259590 | 0.842370 | 2.695185e-58 | -8.615850e-47 |
| Msa1254370 | Msa1260130 | -0.809215 | 2.112521e-50 | -8.615850e-47 |
| Msa1254370 | Msa1270960 | 0.808389 | 3.172926e-50 | -8.615850e-47 |
| Msa1254370 | Msa1294610 | 0.960453 | 1.418909e-118 | -8.615850e-47 |
| Msa1254370 | Msa1299290 | 0.813585 | 2.375660e-51 | -8.615850e-47 |
| Msa1254370 | Msa1300050 | -0.804886 | 1.741586e-49 | -8.615850e-47 |
| Msa1254370 | Msa1302190 | 0.818298 | 2.108456e-52 | -8.615850e-47 |
| Msa1254370 | Msa1307660 | 0.844575 | 6.942858e-59 | -8.615850e-47 |
| Msa1254370 | Msa1308080 | 0.813932 | 1.992997e-51 | -8.615850e-47 |
| Msa1254370 | Msa1310770 | 0.814425 | 1.550601e-51 | -8.615850e-47 |
| Msa1254370 | Msa1332040 | 0.866066 | 3.741896e-65 | -8.615850e-47 |
| Msa1254370 | Msa1332870 | 0.808738 | 2.672820e-50 | -8.615850e-47 |
| Msa1254370 | Msa1362880 | -0.821032 | 5.007986e-53 | -8.615850e-47 |
| Msa1254370 | Msa1363710 | 0.813569 | 2.395445e-51 | -8.615850e-47 |
| Msa1254370 | Msa1365700 | 0.847379 | 1.200368e-59 | -8.615850e-47 |
| Msa1254370 | Msa1395230 | 0.847423 | 1.167367e-59 | -8.615850e-47 |
| Msa1254370 | Msa1400610 | 0.800437 | 1.442202e-48 | -8.615850e-47 |
| Msa1254370 | Msa1403930 | 0.846643 | 1.908810e-59 | -8.615850e-47 |
| Msa1254370 | Msa1410430 | 0.839269 | 1.752574e-57 | -8.615850e-47 |
| Msa1254370 | Msa1420990 | -0.805637 | 1.212646e-49 | -8.615850e-47 |
| Msa1254370 | Msa1426030 | -0.817549 | 3.113440e-52 | -8.615850e-47 |
| Msa1254370 | Msa1442160 | 0.814749 | 1.314793e-51 | -8.615850e-47 |
| Msa1254370 | Msa1444740 | -0.804787 | 1.826972e-49 | -8.615850e-47 |
| Msa1254370 | Msa1445610 | 0.829820 | 4.156852e-55 | -8.615850e-47 |
| Msa1254370 | Msa1449250 | 0.816986 | 4.167731e-52 | -8.615850e-47 |
| Msa1254370 | Msa1453780 | 0.898344 | 5.816120e-77 | -8.615850e-47 |
| Msa0376450 | Msa1254370 | 0.800078 | 1.706367e-48 | -8.615850e-47 |
| Msa0380040 | Msa1254370 | -0.816808 | 4.568378e-52 | -8.615850e-47 |
| Msa0399340 | Msa1254370 | -0.803589 | 3.244195e-49 | -8.615850e-47 |
| Msa0414950 | Msa1254370 | 0.801147 | 1.032835e-48 | -8.615850e-47 |
| Msa0421780 | Msa1254370 | 0.806916 | 6.518517e-50 | -8.615850e-47 |
| Msa0429290 | Msa1254370 | -0.825318 | 5.003294e-54 | -8.615850e-47 |
| Msa0442200 | Msa1254370 | -0.809097 | 2.239587e-50 | -8.615850e-47 |
| Msa0459770 | Msa1254370 | 0.804206 | 2.414319e-49 | -8.615850e-47 |
| Msa0460400 | Msa1254370 | 0.802256 | 6.114495e-49 | -8.615850e-47 |
| Msa0467900 | Msa1254370 | 0.834640 | 2.667263e-56 | -8.615850e-47 |
| Msa0475580 | Msa1254370 | -0.824817 | 6.571433e-54 | -8.615850e-47 |
| Msa0993290 | Msa1254370 | -0.824903 | 6.270469e-54 | -8.615850e-47 |
| Msa0993600 | Msa1254370 | -0.818738 | 1.675840e-52 | -8.615850e-47 |
| Msa1012830 | Msa1254370 | -0.814643 | 1.387844e-51 | -8.615850e-47 |
| Msa1030880 | Msa1254370 | 0.813158 | 2.948461e-51 | -8.615850e-47 |
| Msa1031470 | Msa1254370 | 0.803840 | 2.877432e-49 | -8.615850e-47 |
| Msa1033410 | Msa1254370 | 0.820982 | 5.143164e-53 | -8.615850e-47 |
| Msa1039880 | Msa1254370 | -0.822898 | 1.851751e-53 | -8.615850e-47 |
| Msa1046020 | Msa1254370 | -0.836939 | 6.972068e-57 | -8.615850e-47 |
| Msa1046060 | Msa1254370 | -0.831167 | 1.945810e-55 | -8.615850e-47 |
| Msa1072460 | Msa1254370 | 0.840378 | 9.016746e-58 | -8.615850e-47 |
| Msa1076570 | Msa1254370 | 0.803035 | 4.224640e-49 | -8.615850e-47 |
| Msa1091100 | Msa1254370 | -0.816817 | 4.547619e-52 | -8.615850e-47 |
| Msa0259860 | Msa1254370 | 0.813055 | 3.106354e-51 | -8.615850e-47 |
| Msa0260950 | Msa1254370 | 0.818244 | 2.168823e-52 | -8.615850e-47 |
| Msa0269450 | Msa1254370 | -0.812020 | 5.231002e-51 | -8.615850e-47 |
| Msa0280090 | Msa1254370 | -0.804954 | 1.685264e-49 | -8.615850e-47 |
| Msa0333720 | Msa1254370 | 0.816847 | 4.477150e-52 | -8.615850e-47 |
| Msa1116130 | Msa1254370 | 0.801547 | 8.551041e-49 | -8.615850e-47 |
| Msa1134090 | Msa1254370 | -0.814497 | 1.494936e-51 | -8.615850e-47 |
| Msa1143930 | Msa1254370 | 0.826265 | 2.981962e-54 | -8.615850e-47 |
| Msa1157420 | Msa1254370 | 0.813803 | 2.126967e-51 | -8.615850e-47 |
| Msa1177260 | Msa1254370 | 0.813692 | 2.250644e-51 | -8.615850e-47 |
| Msa1181550 | Msa1254370 | -0.828761 | 7.509606e-55 | -8.615850e-47 |
| Msa1190890 | Msa1254370 | 0.808561 | 2.914992e-50 | -8.615850e-47 |
| Msa1191470 | Msa1254370 | 0.818005 | 2.456662e-52 | -8.615850e-47 |
| Msa1191890 | Msa1254370 | 0.801290 | 9.652770e-49 | -8.615850e-47 |
| Msa1201430 | Msa1254370 | 0.959336 | 2.493199e-117 | -8.615850e-47 |
| Msa1211140 | Msa1254370 | 0.815631 | 8.375422e-52 | -8.615850e-47 |
| Msa1217430 | Msa1254370 | 0.819845 | 9.378181e-53 | -8.615850e-47 |
| Msa0512750 | Msa1254370 | -0.817978 | 2.491465e-52 | -8.615850e-47 |
| Msa0519220 | Msa1254370 | -0.823410 | 1.405918e-53 | -8.615850e-47 |
| Msa0528020 | Msa1254370 | 0.804861 | 1.762822e-49 | -8.615850e-47 |
| Msa0539000 | Msa1254370 | 0.809853 | 1.541120e-50 | -8.615850e-47 |
| Msa0553220 | Msa1254370 | 0.875733 | 2.441087e-68 | -8.615850e-47 |
| Msa0563260 | Msa1254370 | 0.846885 | 1.639268e-59 | -8.615850e-47 |
| Msa0585000 | Msa1254370 | 0.862417 | 5.143936e-64 | -8.615850e-47 |
| Msa0586520 | Msa1254370 | 0.813039 | 3.132141e-51 | -8.615850e-47 |
| Msa0598810 | Msa1254370 | -0.806121 | 9.591036e-50 | -8.615850e-47 |
| Msa0860900 | Msa1254370 | 0.814778 | 1.295504e-51 | -8.615850e-47 |
| Msa0864470 | Msa1254370 | 0.807551 | 4.783520e-50 | -8.615850e-47 |
| Msa0867050 | Msa1254370 | 0.838040 | 3.641132e-57 | -8.615850e-47 |
| Msa0898670 | Msa1254370 | -0.800632 | 1.316053e-48 | -8.615850e-47 |
| Msa0930460 | Msa1254370 | 0.808825 | 2.560887e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1254370 | MtrunA17_Chr8g0371401 | 93.626 | 455 | 23 | 3 | 1 | 450 | 1 | 454 | 0.0 | 769 |
| Msa1254370 | MtrunA17_Chr5g0405961 | 45.397 | 478 | 193 | 20 | 12 | 444 | 23 | 477 | 2.46e-102 | 315 |
| Msa1254370 | MtrunA17_Chr1g0157011 | 38.546 | 454 | 218 | 17 | 17 | 437 | 91 | 516 | 5.80e-58 | 199 |
| Msa1254370 | MtrunA17_Chr3g0143261 | 33.092 | 414 | 202 | 16 | 59 | 431 | 88 | 467 | 1.02e-40 | 151 |
| Msa1254370 | MtrunA17_Chr3g0143171 | 34.595 | 370 | 165 | 17 | 75 | 405 | 1 | 332 | 7.77e-35 | 134 |
| Msa1254370 | MtrunA17_Chr5g0440821 | 40.909 | 154 | 81 | 3 | 308 | 451 | 290 | 443 | 5.32e-24 | 105 |
| Msa1254370 | MtrunA17_Chr7g0276671 | 37.168 | 113 | 67 | 2 | 297 | 405 | 80 | 192 | 2.00e-13 | 72.0 |
| Msa1254370 | MtrunA17_Chr4g0045341 | 33.121 | 157 | 91 | 7 | 254 | 406 | 32 | 178 | 5.15e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1254370 | AT4G35890.1 | 35.500 | 400 | 195 | 17 | 37 | 408 | 86 | 450 | 4.97e-48 | 172 |
| Msa1254370 | AT5G66100.1 | 33.333 | 405 | 203 | 17 | 26 | 407 | 52 | 412 | 1.91e-37 | 142 |
| Msa1254370 | AT4G35890.2 | 33.884 | 363 | 181 | 16 | 37 | 375 | 86 | 413 | 1.02e-35 | 137 |
| Msa1254370 | AT5G66100.2 | 30.284 | 317 | 164 | 15 | 49 | 343 | 66 | 347 | 9.29e-12 | 66.6 |
Find 164 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCGCTTAATTGCAATTT+TGG | 0.104445 | 8_2:+52509504 | Msa1254370:three_prime_UTR |
| GCCACCAATCCCACCTTATA+TGG | 0.195554 | 8_2:+52507597 | Msa1254370:CDS |
| ATCTCCGTAGCAAAATAATT+TGG | 0.211790 | 8_2:-52506438 | None:intergenic |
| AATCCTGCTATTAAATTTAG+AGG | 0.222995 | 8_2:-52508032 | None:intergenic |
| TGGCCATTGGATTGGGAATC+AGG | 0.243284 | 8_2:-52506466 | None:intergenic |
| ACCAGATTGACTACTATTTC+AGG | 0.266021 | 8_2:+52507844 | Msa1254370:CDS |
| TTGTTTCCAGATCAATGTTT+TGG | 0.295458 | 8_2:-52509312 | None:intergenic |
| TTTGGTTTGAGAGTGAATTA+AGG | 0.309884 | 8_2:-52506420 | None:intergenic |
| CTGTGAATCGATGGAAATAA+AGG | 0.315887 | 8_2:-52509529 | None:intergenic |
| TGGCGGCTGGCGGCCTCCAT+TGG | 0.323639 | 8_2:-52507236 | None:intergenic |
| CTCCAATGCTGCTGCTTCTT+CGG | 0.327782 | 8_2:+52506679 | Msa1254370:CDS |
| GTCTGCTTCCAGAGTTAAAA+TGG | 0.329463 | 8_2:-52507435 | None:intergenic |
| TCCGGTTCCTGGATGAATTT+CGG | 0.329667 | 8_2:-52507375 | None:intergenic |
| TATAACATGTGACTGATTAA+TGG | 0.335264 | 8_2:+52509471 | Msa1254370:three_prime_UTR |
| ATAAAATAAGGAGGCGGAAT+TGG | 0.343985 | 8_2:+52509221 | Msa1254370:CDS |
| CCACCTTATATGGGCTCATA+TGG | 0.349352 | 8_2:+52507607 | Msa1254370:CDS |
| CAATCATAACTCTGCTCAAA+TGG | 0.349628 | 8_2:+52507306 | Msa1254370:CDS |
| TGGCGATTTCGCCGGAGCTT+TGG | 0.359704 | 8_2:-52506741 | None:intergenic |
| CTGGCTCCAAGGTGCGGCGG+CGG | 0.361110 | 8_2:-52506504 | None:intergenic |
| TTAACGGTAGAGACAATTAT+AGG | 0.363096 | 8_2:+52507506 | Msa1254370:CDS |
| GAAGAGGAACATGGATGATC+AGG | 0.368604 | 8_2:+52508001 | Msa1254370:CDS |
| ATATAAGGTGGGATTGGTGG+CGG | 0.368670 | 8_2:-52507595 | None:intergenic |
| CCAAGGTGCGGCGGCGGGAG+AGG | 0.373375 | 8_2:-52506498 | None:intergenic |
| GTTGTAGACCACCGCCATTC+CGG | 0.378736 | 8_2:-52507393 | None:intergenic |
| CGGCGCTGAGGCTGATCATT+GGG | 0.381172 | 8_2:-52507355 | None:intergenic |
| GATTTGTTCCACAGTTTGTA+AGG | 0.390687 | 8_2:+52507536 | Msa1254370:CDS |
| ACCACCGCCATTCCGGTTCC+TGG | 0.392452 | 8_2:-52507386 | None:intergenic |
| CCTCTCCCGCCGCCGCACCT+TGG | 0.396404 | 8_2:+52506498 | Msa1254370:CDS |
| CTCTGGAAGCAGACGTGATC+AGG | 0.400093 | 8_2:+52507444 | Msa1254370:CDS |
| TATCCATATGAGCCCATATA+AGG | 0.400182 | 8_2:-52507610 | None:intergenic |
| ACAAACTGTGGAACAAATCT+TGG | 0.401130 | 8_2:-52507532 | None:intergenic |
| CAACTCATCAGAAAACTTAT+CGG | 0.402114 | 8_2:+52507191 | Msa1254370:CDS |
| GCGTTCATGGCCATTGGATT+GGG | 0.402955 | 8_2:-52506473 | None:intergenic |
| GGTGGTGATGGCGGTGGTGG+TGG | 0.410660 | 8_2:-52506761 | None:intergenic |
| ATAAGGTGGGATTGGTGGCG+GGG | 0.410745 | 8_2:-52507593 | None:intergenic |
| GCCATCACCACCACAGGAAT+TGG | 0.412805 | 8_2:+52506772 | Msa1254370:CDS |
| GCGGCGGAGGAAGGAGGAGG+AGG | 0.419591 | 8_2:-52506575 | None:intergenic |
| TGATCAGGACCGCGGAAATC+AGG | 0.421066 | 8_2:+52507459 | Msa1254370:CDS |
| AGCGTTCATGGCCATTGGAT+TGG | 0.423387 | 8_2:-52506474 | None:intergenic |
| TGTGGTGGTGATGGCGGTGG+TGG | 0.424964 | 8_2:-52506764 | None:intergenic |
| TGCTGCTGCTTCTTCGGTCA+TGG | 0.429405 | 8_2:+52506685 | Msa1254370:CDS |
| GAATATCCAAAACATTGATC+TGG | 0.432389 | 8_2:+52509306 | Msa1254370:CDS |
| GGCGGGAGAGGAAGCGTTCA+TGG | 0.432822 | 8_2:-52506486 | None:intergenic |
| CTCTCCTCAGAAGCAAGTTA+AGG | 0.433186 | 8_2:+52507135 | Msa1254370:CDS |
| TGCACAAACGGTACACTTCT+CGG | 0.433948 | 8_2:-52507759 | None:intergenic |
| TATAAGGTGGGATTGGTGGC+GGG | 0.438843 | 8_2:-52507594 | None:intergenic |
| CGATTTCGCCGGAGCTTTGG+CGG | 0.441633 | 8_2:-52506738 | None:intergenic |
| GGAATTGGTGAAACCTTCCT+TGG | 0.443310 | 8_2:+52506787 | Msa1254370:CDS |
| ACCTGAAATAGTAGTCAATC+TGG | 0.445908 | 8_2:-52507845 | None:intergenic |
| ATCTGAATCCGCCAAAGCTC+CGG | 0.446417 | 8_2:+52506730 | Msa1254370:CDS |
| TGACAACATTCAGATTGTAT+TGG | 0.447780 | 8_2:+52509023 | Msa1254370:CDS |
| TTCATCTGTTGTTGAAGTGC+AGG | 0.450747 | 8_2:+52509059 | Msa1254370:CDS |
| GAAGACATCGACAACACTTC+CGG | 0.453122 | 8_2:+52506629 | Msa1254370:CDS |
| ACAGCGGCGGAGGAAGGAGG+AGG | 0.454286 | 8_2:-52506578 | None:intergenic |
| TTGGAGGGTTTACTCCAAAC+AGG | 0.455281 | 8_2:-52506662 | None:intergenic |
| TCACAGTTTCATAACGTCAA+TGG | 0.458834 | 8_2:+52509256 | Msa1254370:CDS |
| CAGCGGTGGAGGCAACAATC+TGG | 0.459815 | 8_2:-52506523 | None:intergenic |
| TGGCTCCAAGGTGCGGCGGC+GGG | 0.460627 | 8_2:-52506503 | None:intergenic |
| GCCGAAATTCATCCAGGAAC+CGG | 0.461700 | 8_2:+52507374 | Msa1254370:CDS |
| GTTCCTCTAAATTTAATAGC+AGG | 0.461861 | 8_2:+52508029 | Msa1254370:CDS |
| GGTTTCGTTGCTGTCCCACC+AGG | 0.463812 | 8_2:+52507277 | Msa1254370:CDS |
| GACCGAAGAAGCAGCAGCAT+TGG | 0.465776 | 8_2:-52506681 | None:intergenic |
| GAGGAAGCGTTCATGGCCAT+TGG | 0.466060 | 8_2:-52506479 | None:intergenic |
| GAAGATATCGGTTGCACAAA+CGG | 0.466726 | 8_2:-52507771 | None:intergenic |
| CCTTGAGGCGCAGACATTTG+TGG | 0.469144 | 8_2:-52507256 | None:intergenic |
| TAGTATTGGGCATGATTAGT+AGG | 0.473060 | 8_2:-52507568 | None:intergenic |
| CCCATATAAGGTGGGATTGG+TGG | 0.473411 | 8_2:-52507598 | None:intergenic |
| TTGAGCAGAGTTATGATTGT+GGG | 0.478241 | 8_2:-52507302 | None:intergenic |
| ATCGACCTTGCCTCAATCGC+AGG | 0.478474 | 8_2:+52506814 | Msa1254370:CDS |
| ATGGGCTCATATGGATATCA+TGG | 0.478647 | 8_2:+52507616 | Msa1254370:CDS |
| CGAAGAAGCAGCAGCATTGG+AGG | 0.481797 | 8_2:-52506678 | None:intergenic |
| TACGGCGGAAGCAGCGGTGG+AGG | 0.484516 | 8_2:-52506534 | None:intergenic |
| CCACCAATCCCACCTTATAT+GGG | 0.489048 | 8_2:+52507598 | Msa1254370:CDS |
| TTAGTATGCAACTCAGAATC+CGG | 0.489983 | 8_2:-52507813 | None:intergenic |
| GAGGAAGGAGGAGGAGGTGA+CGG | 0.494008 | 8_2:-52506569 | None:intergenic |
| GGAACATGGATGATCAGGGC+TGG | 0.494066 | 8_2:+52508006 | Msa1254370:CDS |
| GGCCATTGGATTGGGAATCA+GGG | 0.495667 | 8_2:-52506465 | None:intergenic |
| CTAACGCTTCAAATGATGTA+TGG | 0.503281 | 8_2:+52507714 | Msa1254370:CDS |
| TAAGGTGGGATTGGTGGCGG+GGG | 0.505872 | 8_2:-52507592 | None:intergenic |
| GAAAGTGTCGACAGCGGCGG+AGG | 0.507299 | 8_2:-52506588 | None:intergenic |
| CGGTCATGGATGCTGACTCA+TGG | 0.507318 | 8_2:+52506699 | Msa1254370:CDS |
| ACCAATTCCTGTGGTGGTGA+TGG | 0.511057 | 8_2:-52506773 | None:intergenic |
| GAGCCCATATAAGGTGGGAT+TGG | 0.512163 | 8_2:-52507601 | None:intergenic |
| GTGTCGACAGCGGCGGAGGA+AGG | 0.512183 | 8_2:-52506584 | None:intergenic |
| GTCTTCCGCCGCCTCAGTGA+CGG | 0.512716 | 8_2:-52506612 | None:intergenic |
| TCCTGTGGTGGTGATGGCGG+TGG | 0.513238 | 8_2:-52506767 | None:intergenic |
| TTGGGCACAAATCCAGCTCT+TGG | 0.515928 | 8_2:-52507337 | None:intergenic |
| GTATCCTTAACTTGCTTCTG+AGG | 0.520478 | 8_2:-52507139 | None:intergenic |
| ACCACCGCCATCACCACCAC+AGG | 0.524419 | 8_2:+52506766 | Msa1254370:CDS |
| CATACATCATTTGAAGCGTT+AGG | 0.525907 | 8_2:-52507713 | None:intergenic |
| TCCAGGAACCGGAATGGCGG+TGG | 0.529103 | 8_2:+52507385 | Msa1254370:CDS |
| AGGTACGGCGGAAGCAGCGG+TGG | 0.532026 | 8_2:-52506537 | None:intergenic |
| TGGAGAATATTGTTCGGATG+AGG | 0.532604 | 8_2:+52509405 | Msa1254370:three_prime_UTR |
| CCACAAATGTCTGCGCCTCA+AGG | 0.534512 | 8_2:+52507256 | Msa1254370:CDS |
| ATGGAACATCTACCAAGAGC+TGG | 0.535798 | 8_2:+52507325 | Msa1254370:CDS |
| GCATGATTAGTAGGCGGTGG+AGG | 0.541418 | 8_2:-52507559 | None:intergenic |
| AATTCAAACACGTCTTCCAA+TGG | 0.542364 | 8_2:+52507220 | Msa1254370:CDS |
| GGTGGTGGTGGCGATTTCGC+CGG | 0.543934 | 8_2:-52506749 | None:intergenic |
| GAACATGGATGATCAGGGCT+GGG | 0.545097 | 8_2:+52508007 | Msa1254370:CDS |
| CAGACATTTGTGGCGGCTGG+CGG | 0.546833 | 8_2:-52507246 | None:intergenic |
| TGTTCGGATGAGGCAGGAAG+CGG | 0.550019 | 8_2:+52509415 | Msa1254370:three_prime_UTR |
| TGCAACTCAGAATCCGGAGG+TGG | 0.551141 | 8_2:-52507807 | None:intergenic |
| GTTCGGATGAGGCAGGAAGC+GGG | 0.552139 | 8_2:+52509416 | Msa1254370:three_prime_UTR |
| GCAACGACACATACTTGAAG+AGG | 0.552646 | 8_2:+52507985 | Msa1254370:CDS |
| GAATATTGTTCGGATGAGGC+AGG | 0.553635 | 8_2:+52509409 | Msa1254370:three_prime_UTR |
| CTCGGAGGCTCCACATGCAA+AGG | 0.554785 | 8_2:-52507741 | None:intergenic |
| GTACTAAAACTGTGAATCGA+TGG | 0.557881 | 8_2:-52509538 | None:intergenic |
| TCGACAGCGGCGGAGGAAGG+AGG | 0.564961 | 8_2:-52506581 | None:intergenic |
| AATAAAACACTTCATAACCT+TGG | 0.565964 | 8_2:+52506389 | None:intergenic |
| CCATATGAGCCCATATAAGG+TGG | 0.568642 | 8_2:-52507607 | None:intergenic |
| AAGCAAGTTAAGGATACTGC+AGG | 0.569915 | 8_2:+52507145 | Msa1254370:CDS |
| TTGGCGGATTCAGATAAAGC+AGG | 0.573000 | 8_2:-52506722 | None:intergenic |
| TGGGCATGATTAGTAGGCGG+TGG | 0.573030 | 8_2:-52507562 | None:intergenic |
| GGAGGTGACGGCGATGAATG+AGG | 0.573341 | 8_2:-52506557 | None:intergenic |
| TTTCGCCGTCACTGAGGCGG+CGG | 0.577187 | 8_2:+52506607 | Msa1254370:CDS |
| AACAATCTGGCTCCAAGGTG+CGG | 0.577674 | 8_2:-52506510 | None:intergenic |
| GAGGCAACAATCTGGCTCCA+AGG | 0.579221 | 8_2:-52506515 | None:intergenic |
| TTTAGGGTGATAAAATAAGG+AGG | 0.579670 | 8_2:+52509212 | Msa1254370:intron |
| GGTCTACAACCACGCGGAGA+TGG | 0.584916 | 8_2:+52507406 | Msa1254370:CDS |
| CCGGTGGTAAGAGACCTGTT+TGG | 0.585862 | 8_2:+52506648 | Msa1254370:CDS |
| AAGAGGAACATGGATGATCA+GGG | 0.588462 | 8_2:+52508002 | Msa1254370:CDS |
| GGTTTCACCAATTCCTGTGG+TGG | 0.591849 | 8_2:-52506779 | None:intergenic |
| CACTTTCGCCGTCACTGAGG+CGG | 0.594778 | 8_2:+52506604 | Msa1254370:CDS |
| CTGGATGAATTTCGGCGCTG+AGG | 0.595383 | 8_2:-52507367 | None:intergenic |
| CACATACTTGAAGAGGAACA+TGG | 0.596708 | 8_2:+52507992 | Msa1254370:CDS |
| AACCCTGATTCCCAATCCAA+TGG | 0.597508 | 8_2:+52506463 | Msa1254370:exon |
| AGGGTGATAAAATAAGGAGG+CGG | 0.599307 | 8_2:+52509215 | Msa1254370:intron |
| ATGAGGTACGGCGGAAGCAG+CGG | 0.604517 | 8_2:-52506540 | None:intergenic |
| GAGTTATGATTGTGGGACCC+TGG | 0.608836 | 8_2:-52507295 | None:intergenic |
| GTATGGTCCACCTTTGCATG+TGG | 0.613005 | 8_2:+52507731 | Msa1254370:CDS |
| AATTCATCCAGGAACCGGAA+TGG | 0.615009 | 8_2:+52507379 | Msa1254370:CDS |
| TGACGGCGATGAATGAGGTA+CGG | 0.620582 | 8_2:-52506552 | None:intergenic |
| GAAGAAGCAGCAGCATTGGA+GGG | 0.621002 | 8_2:-52506677 | None:intergenic |
| CCAAACAGGTCTCTTACCAC+CGG | 0.621816 | 8_2:-52506648 | None:intergenic |
| GGAGGCTCCACATGCAAAGG+TGG | 0.622207 | 8_2:-52507738 | None:intergenic |
| CATATGAGCCCATATAAGGT+GGG | 0.622209 | 8_2:-52507606 | None:intergenic |
| TTTGAGCAGAGTTATGATTG+TGG | 0.622984 | 8_2:-52507303 | None:intergenic |
| CATTCCAGTCCTGATTTCCG+CGG | 0.624273 | 8_2:-52507468 | None:intergenic |
| AAATACCTGCGATTGAGGCA+AGG | 0.626925 | 8_2:-52506819 | None:intergenic |
| TCAAACACGTCTTCCAATGG+AGG | 0.628375 | 8_2:+52507223 | Msa1254370:CDS |
| TATGATTGTGGGACCCTGGT+GGG | 0.628962 | 8_2:-52507291 | None:intergenic |
| AGGCAAGGTCGATAAATCCA+AGG | 0.629817 | 8_2:-52506804 | None:intergenic |
| TGAGGCGCAGACATTTGTGG+CGG | 0.632231 | 8_2:-52507253 | None:intergenic |
| GGCGAAAGTGTCGACAGCGG+CGG | 0.635606 | 8_2:-52506591 | None:intergenic |
| GAAGGTTTCACCAATTCCTG+TGG | 0.639283 | 8_2:-52506782 | None:intergenic |
| AAGGTCGATAAATCCAAGGA+AGG | 0.645541 | 8_2:-52506800 | None:intergenic |
| TCATCCAGGAACCGGAATGG+CGG | 0.654453 | 8_2:+52507382 | Msa1254370:CDS |
| GTTTCGTTGCTGTCCCACCA+GGG | 0.657439 | 8_2:+52507278 | Msa1254370:CDS |
| AATCTGGCTCCAAGGTGCGG+CGG | 0.658713 | 8_2:-52506507 | None:intergenic |
| AATTCCTGTGGTGGTGATGG+CGG | 0.664267 | 8_2:-52506770 | None:intergenic |
| GAATTAAGGAATTTATACCA+AGG | 0.667605 | 8_2:-52506406 | None:intergenic |
| GTATGCAACTCAGAATCCGG+AGG | 0.681468 | 8_2:-52507810 | None:intergenic |
| AGCAGACGTGATCAGGACCG+CGG | 0.696086 | 8_2:+52507451 | Msa1254370:CDS |
| GACATCGACAACACTTCCGG+TGG | 0.701044 | 8_2:+52506632 | Msa1254370:CDS |
| GACGGCGAAAGTGTCGACAG+CGG | 0.707075 | 8_2:-52506594 | None:intergenic |
| CGACACTTTCGCCGTCACTG+AGG | 0.708576 | 8_2:+52506601 | Msa1254370:CDS |
| GGTGGAGGCCTTACAAACTG+TGG | 0.712069 | 8_2:-52507544 | None:intergenic |
| CGGCGATGAATGAGGTACGG+CGG | 0.718688 | 8_2:-52506549 | None:intergenic |
| TATTGGGCATGATTAGTAGG+CGG | 0.723347 | 8_2:-52507565 | None:intergenic |
| GGGACAGCAACGAAACCTTG+AGG | 0.727311 | 8_2:-52507271 | None:intergenic |
| TTATGATTGTGGGACCCTGG+TGG | 0.738203 | 8_2:-52507292 | None:intergenic |
| TGGTGAGAACCATCTCCGCG+TGG | 0.763757 | 8_2:-52507415 | None:intergenic |
| ACAAACGGTACACTTCTCGG+AGG | 0.802512 | 8_2:-52507756 | None:intergenic |
| GGCGGTGGTCTACAACCACG+CGG | 0.809396 | 8_2:+52507400 | Msa1254370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGTAATTTTTTTAAATAG+GGG | - | chr8_2:52508353-52508372 | None:intergenic | 10.0% |
| !!! | AATTTTACTATTTTTTGATT+TGG | + | chr8_2:52508639-52508658 | Msa1254370:intron | 10.0% |
| !! | AAAACAATATATTTATGATA+TGG | - | chr8_2:52509694-52509713 | None:intergenic | 10.0% |
| !! | CAAAACAATAAAATGAAAAT+TGG | - | chr8_2:52507893-52507912 | None:intergenic | 15.0% |
| !!! | TTTTAATTAAATCTTTGACA+TGG | + | chr8_2:52508093-52508112 | Msa1254370:intron | 15.0% |
| !! | TTTAATTAAATCTTTGACAT+GGG | + | chr8_2:52508094-52508113 | Msa1254370:intron | 15.0% |
| !! | ATTCAATAACAATTTGTATT+AGG | + | chr8_2:52508282-52508301 | Msa1254370:intron | 15.0% |
| !!! | TTGTAATTTTTTTAAATAGG+GGG | - | chr8_2:52508352-52508371 | None:intergenic | 15.0% |
| !! | TCAAAAGATTATTAATACAA+AGG | - | chr8_2:52508604-52508623 | None:intergenic | 15.0% |
| !!! | GTATTAATAATCTTTTGATA+TGG | + | chr8_2:52508606-52508625 | Msa1254370:intron | 15.0% |
| !! | ATAAAATTAGAAAATATGAG+TGG | + | chr8_2:52508720-52508739 | Msa1254370:intron | 15.0% |
| !! | TGATAATATCAATTATAATG+TGG | + | chr8_2:52508934-52508953 | Msa1254370:intron | 15.0% |
| !! | GATAATATCAATTATAATGT+GGG | + | chr8_2:52508935-52508954 | Msa1254370:intron | 15.0% |
| !!! | AATCTGTTACTTTTATTTTT+AGG | + | chr8_2:52509195-52509214 | Msa1254370:intron | 15.0% |
| !!! | ATCTGTTACTTTTATTTTTA+GGG | + | chr8_2:52509196-52509215 | Msa1254370:intron | 15.0% |
| !!! | CTTTTCTTAAACAATTTTAA+TGG | + | chr8_2:52509385-52509404 | Msa1254370:three_prime_UTR | 15.0% |
| !!! | ATATTTTCAGATTTGAAAAT+GGG | - | chr8_2:52509563-52509582 | None:intergenic | 15.0% |
| !!! | TATATTTTCAGATTTGAAAA+TGG | - | chr8_2:52509564-52509583 | None:intergenic | 15.0% |
| !! | AATAAATAAGCAACTAAAGT+GGG | - | chr8_2:52506851-52506870 | None:intergenic | 20.0% |
| !! | TAATAAATAAGCAACTAAAG+TGG | - | chr8_2:52506852-52506871 | None:intergenic | 20.0% |
| !!! | TTCCTTTATTTATCAAGTTA+GGG | + | chr8_2:52506904-52506923 | Msa1254370:intron | 20.0% |
| !! | GCATATAACTGAAATATATT+TGG | + | chr8_2:52506961-52506980 | Msa1254370:intron | 20.0% |
| !!! | AATATATTTGGAATTGTTAC+TGG | + | chr8_2:52506973-52506992 | Msa1254370:intron | 20.0% |
| !!! | GCTCATAATAGAAATTTTAA+CGG | + | chr8_2:52507490-52507509 | Msa1254370:CDS | 20.0% |
| !! | AAAAATATTGCAGAAGATAT+CGG | - | chr8_2:52507786-52507805 | None:intergenic | 20.0% |
| !! | ATTCAATAAAGTAAGTTGTT+TGG | + | chr8_2:52508052-52508071 | Msa1254370:intron | 20.0% |
| !!! | TTTTGTCATTTTCTTTCATA+GGG | + | chr8_2:52508527-52508546 | Msa1254370:intron | 20.0% |
| !!! | ATTTTTAGGGTGATAAAATA+AGG | + | chr8_2:52509209-52509228 | Msa1254370:intron | 20.0% |
| !!! | TTTTAATGGAGAATATTGTT+CGG | + | chr8_2:52509399-52509418 | Msa1254370:three_prime_UTR | 20.0% |
| !!! | AAAAAAAAAACTTCTAAAGC+TGG | - | chr8_2:52509592-52509611 | None:intergenic | 20.0% |
| ! | GAATTAAGGAATTTATACCA+AGG | - | chr8_2:52506409-52506428 | None:intergenic | 25.0% |
| !!! | CAAACCAAATTATTTTGCTA+CGG | + | chr8_2:52506434-52506453 | Msa1254370:five_prime_UTR | 25.0% |
| !! | GTTCCTTTATTTATCAAGTT+AGG | + | chr8_2:52506903-52506922 | Msa1254370:intron | 25.0% |
| ! | AACCCTAACTTGATAAATAA+AGG | - | chr8_2:52506909-52506928 | None:intergenic | 25.0% |
| !!! | TTCTGTTTTTGTTATGTTTG+TGG | + | chr8_2:52507052-52507071 | Msa1254370:intron | 25.0% |
| !!! | TTGTTTTGAGTGTTGATTTT+AGG | + | chr8_2:52507093-52507112 | Msa1254370:intron | 25.0% |
| !!! | TGTTTTGAGTGTTGATTTTA+GGG | + | chr8_2:52507094-52507113 | Msa1254370:intron | 25.0% |
| ! | AATCCTGCTATTAAATTTAG+AGG | - | chr8_2:52508035-52508054 | None:intergenic | 25.0% |
| ! | TGACATAATCAATTTATCGT+TGG | + | chr8_2:52508168-52508187 | Msa1254370:intron | 25.0% |
| !! | TTAATCAATATCTTTTACCC+TGG | + | chr8_2:52508212-52508231 | Msa1254370:intron | 25.0% |
| !!! | AAAATCGCAACTTTTTGAAA+CGG | - | chr8_2:52508327-52508346 | None:intergenic | 25.0% |
| ! | ATCATATTTCCCTTATGTTA+GGG | + | chr8_2:52508469-52508488 | Msa1254370:intron | 25.0% |
| !!! | CTTTTGTCATTTTCTTTCAT+AGG | + | chr8_2:52508526-52508545 | Msa1254370:intron | 25.0% |
| !!! | TTTGTCATTTTCTTTCATAG+GGG | + | chr8_2:52508528-52508547 | Msa1254370:intron | 25.0% |
| ! | TAGAAGAACAATCATAAAAG+AGG | - | chr8_2:52508688-52508707 | None:intergenic | 25.0% |
| ! | AAATTAGAAAATATGAGTGG+AGG | + | chr8_2:52508723-52508742 | Msa1254370:intron | 25.0% |
| ! | AAGTGAAAATCAAAAGGATT+TGG | - | chr8_2:52508831-52508850 | None:intergenic | 25.0% |
| ! | GTGAAAAAGTGAAAATCAAA+AGG | - | chr8_2:52508837-52508856 | None:intergenic | 25.0% |
| !!! | AATGCATTTTTTTGTCTCTT+AGG | + | chr8_2:52508987-52509006 | Msa1254370:intron | 25.0% |
| ! | GTACTAAATTAGAATGTTTG+TGG | - | chr8_2:52509112-52509131 | None:intergenic | 25.0% |
| ! | GATCTGGAAACAAATAAAAA+TGG | + | chr8_2:52509322-52509341 | Msa1254370:CDS | 25.0% |
| ! | TATAACATGTGACTGATTAA+TGG | + | chr8_2:52509471-52509490 | Msa1254370:three_prime_UTR | 25.0% |
| ! | TATGCATTTCACAAATTCAA+TGG | - | chr8_2:52509643-52509662 | None:intergenic | 25.0% |
| !! | TTTGGTTTGAGAGTGAATTA+AGG | - | chr8_2:52506423-52506442 | None:intergenic | 30.0% |
| ATCTCCGTAGCAAAATAATT+TGG | - | chr8_2:52506441-52506460 | None:intergenic | 30.0% | |
| CAACTCATCAGAAAACTTAT+CGG | + | chr8_2:52507191-52507210 | Msa1254370:CDS | 30.0% | |
| TTAACGGTAGAGACAATTAT+AGG | + | chr8_2:52507506-52507525 | Msa1254370:CDS | 30.0% | |
| TTCAGGTAACGTTTATCTAT+TGG | + | chr8_2:52507861-52507880 | Msa1254370:intron | 30.0% | |
| GTTCCTCTAAATTTAATAGC+AGG | + | chr8_2:52508029-52508048 | Msa1254370:CDS | 30.0% | |
| !!! | AAATCGCAACTTTTTGAAAC+GGG | - | chr8_2:52508326-52508345 | None:intergenic | 30.0% |
| ! | GTTTCAAAAAGTTGCGATTT+TGG | + | chr8_2:52508326-52508345 | Msa1254370:intron | 30.0% |
| GATCATATTTCCCTTATGTT+AGG | + | chr8_2:52508468-52508487 | Msa1254370:intron | 30.0% | |
| TCATATTTCCCTTATGTTAG+GGG | + | chr8_2:52508470-52508489 | Msa1254370:intron | 30.0% | |
| !!! | TTGTCATTTTCTTTCATAGG+GGG | + | chr8_2:52508529-52508548 | Msa1254370:intron | 30.0% |
| !!! | GTTTTAAGAAGTTGCGATTT+TGG | - | chr8_2:52508556-52508575 | None:intergenic | 30.0% |
| TCGCAACTTCTTAAAACTTA+AGG | + | chr8_2:52508559-52508578 | Msa1254370:intron | 30.0% | |
| TGACAACATTCAGATTGTAT+TGG | + | chr8_2:52509023-52509042 | Msa1254370:CDS | 30.0% | |
| ! | TTTAGGGTGATAAAATAAGG+AGG | + | chr8_2:52509212-52509231 | Msa1254370:intron | 30.0% |
| GAATATCCAAAACATTGATC+TGG | + | chr8_2:52509306-52509325 | Msa1254370:CDS | 30.0% | |
| ! | TTGTTTCCAGATCAATGTTT+TGG | - | chr8_2:52509315-52509334 | None:intergenic | 30.0% |
| ACAAATAAAAATGGTGCATC+TGG | + | chr8_2:52509331-52509350 | Msa1254370:CDS | 30.0% | |
| ! | TTGTTATGAATTTTCTCACG+AGG | + | chr8_2:52509446-52509465 | Msa1254370:three_prime_UTR | 30.0% |
| ! | TCTTCGCTTAATTGCAATTT+TGG | + | chr8_2:52509504-52509523 | Msa1254370:three_prime_UTR | 30.0% |
| !! | AAAAAAACTTCTAAAGCTGG+AGG | - | chr8_2:52509589-52509608 | None:intergenic | 30.0% |
| GAAAAAAATACCTGCGATTG+AGG | - | chr8_2:52506827-52506846 | None:intergenic | 35.0% | |
| ! | CGATAAGTTTTCTGATGAGT+TGG | - | chr8_2:52507193-52507212 | None:intergenic | 35.0% |
| AATTCAAACACGTCTTCCAA+TGG | + | chr8_2:52507220-52507239 | Msa1254370:CDS | 35.0% | |
| TTGAGCAGAGTTATGATTGT+GGG | - | chr8_2:52507305-52507324 | None:intergenic | 35.0% | |
| TTTGAGCAGAGTTATGATTG+TGG | - | chr8_2:52507306-52507325 | None:intergenic | 35.0% | |
| CAATCATAACTCTGCTCAAA+TGG | + | chr8_2:52507306-52507325 | Msa1254370:CDS | 35.0% | |
| ACAAACTGTGGAACAAATCT+TGG | - | chr8_2:52507535-52507554 | None:intergenic | 35.0% | |
| ! | GATTTGTTCCACAGTTTGTA+AGG | + | chr8_2:52507536-52507555 | Msa1254370:CDS | 35.0% |
| ! | TAGTATTGGGCATGATTAGT+AGG | - | chr8_2:52507571-52507590 | None:intergenic | 35.0% |
| TATCCATATGAGCCCATATA+AGG | - | chr8_2:52507613-52507632 | None:intergenic | 35.0% | |
| ! | CATACATCATTTGAAGCGTT+AGG | - | chr8_2:52507716-52507735 | None:intergenic | 35.0% |
| CTAACGCTTCAAATGATGTA+TGG | + | chr8_2:52507714-52507733 | Msa1254370:CDS | 35.0% | |
| !!! | TGCAATATTTTTTCCACCTC+CGG | + | chr8_2:52507794-52507813 | Msa1254370:CDS | 35.0% |
| TTAGTATGCAACTCAGAATC+CGG | - | chr8_2:52507816-52507835 | None:intergenic | 35.0% | |
| ACCAGATTGACTACTATTTC+AGG | + | chr8_2:52507844-52507863 | Msa1254370:CDS | 35.0% | |
| ACCTGAAATAGTAGTCAATC+TGG | - | chr8_2:52507848-52507867 | None:intergenic | 35.0% | |
| AACAACGATCTTCAAATCCA+GGG | - | chr8_2:52508232-52508251 | None:intergenic | 35.0% | |
| ! | GCAACTTTTTGCGAAGATAA+GGG | + | chr8_2:52508438-52508457 | Msa1254370:intron | 35.0% |
| ! | CAACTTTTTGCGAAGATAAG+GGG | + | chr8_2:52508439-52508458 | Msa1254370:intron | 35.0% |
| CATATTTCCCTTATGTTAGG+GGG | + | chr8_2:52508471-52508490 | Msa1254370:intron | 35.0% | |
| ! | AAGAGCATATTTCCCTAAAC+AGG | + | chr8_2:52508498-52508517 | Msa1254370:intron | 35.0% |
| AGAGCATATTTCCCTAAACA+GGG | + | chr8_2:52508499-52508518 | Msa1254370:intron | 35.0% | |
| !!! | TGTCATTTTCTTTCATAGGG+GGG | + | chr8_2:52508530-52508549 | Msa1254370:intron | 35.0% |
| ATAAAATAAGGAGGCGGAAT+TGG | + | chr8_2:52509221-52509240 | Msa1254370:CDS | 35.0% | |
| TCACAGTTTCATAACGTCAA+TGG | + | chr8_2:52509256-52509275 | Msa1254370:CDS | 35.0% | |
| CTGTGAATCGATGGAAATAA+AGG | - | chr8_2:52509532-52509551 | None:intergenic | 35.0% | |
| GTACTAAAACTGTGAATCGA+TGG | - | chr8_2:52509541-52509560 | None:intergenic | 35.0% | |
| GCATTTCACAAATTCAATGG+TGG | - | chr8_2:52509640-52509659 | None:intergenic | 35.0% | |
| AAGGTCGATAAATCCAAGGA+AGG | - | chr8_2:52506803-52506822 | None:intergenic | 40.0% | |
| !!! | GAGTGTTGATTTTAGGGTAC+TGG | + | chr8_2:52507100-52507119 | Msa1254370:intron | 40.0% |
| !! | GTATCCTTAACTTGCTTCTG+AGG | - | chr8_2:52507142-52507161 | None:intergenic | 40.0% |
| AAGCAAGTTAAGGATACTGC+AGG | + | chr8_2:52507145-52507164 | Msa1254370:CDS | 40.0% | |
| !!! | GGTTCTCACCATTTTAACTC+TGG | + | chr8_2:52507427-52507446 | Msa1254370:CDS | 40.0% |
| GTCTGCTTCCAGAGTTAAAA+TGG | - | chr8_2:52507438-52507457 | None:intergenic | 40.0% | |
| TATTGGGCATGATTAGTAGG+CGG | - | chr8_2:52507568-52507587 | None:intergenic | 40.0% | |
| CATATGAGCCCATATAAGGT+GGG | - | chr8_2:52507609-52507628 | None:intergenic | 40.0% | |
| ATGGGCTCATATGGATATCA+TGG | + | chr8_2:52507616-52507635 | Msa1254370:CDS | 40.0% | |
| ! | GAAGATATCGGTTGCACAAA+CGG | - | chr8_2:52507774-52507793 | None:intergenic | 40.0% |
| TCACTGCAAAAGACAAGTTG+TGG | - | chr8_2:52507954-52507973 | None:intergenic | 40.0% | |
| CACATACTTGAAGAGGAACA+TGG | + | chr8_2:52507992-52508011 | Msa1254370:CDS | 40.0% | |
| AAGAGGAACATGGATGATCA+GGG | + | chr8_2:52508002-52508021 | Msa1254370:CDS | 40.0% | |
| CAACAACGATCTTCAAATCC+AGG | - | chr8_2:52508233-52508252 | None:intergenic | 40.0% | |
| !!! | TCAGCAATTTTGGGACGAAA+GGG | - | chr8_2:52508382-52508401 | None:intergenic | 40.0% |
| ! | CGCAACTTTTTGCGAAGATA+AGG | + | chr8_2:52508437-52508456 | Msa1254370:intron | 40.0% |
| ! | CTTTTGACCCCCTAACATAA+GGG | - | chr8_2:52508481-52508500 | None:intergenic | 40.0% |
| ! | TCTTTTGACCCCCTAACATA+AGG | - | chr8_2:52508482-52508501 | None:intergenic | 40.0% |
| GAGCATATTTCCCTAAACAG+GGG | + | chr8_2:52508500-52508519 | Msa1254370:intron | 40.0% | |
| ACAAAAGTGACCCCTGTTTA+GGG | - | chr8_2:52508513-52508532 | None:intergenic | 40.0% | |
| TTCATCTGTTGTTGAAGTGC+AGG | + | chr8_2:52509059-52509078 | Msa1254370:CDS | 40.0% | |
| AGGGTGATAAAATAAGGAGG+CGG | + | chr8_2:52509215-52509234 | Msa1254370:intron | 40.0% | |
| TGGAGAATATTGTTCGGATG+AGG | + | chr8_2:52509405-52509424 | Msa1254370:three_prime_UTR | 40.0% | |
| AACCCTGATTCCCAATCCAA+TGG | + | chr8_2:52506463-52506482 | Msa1254370:exon | 45.0% | |
| GAAGACATCGACAACACTTC+CGG | + | chr8_2:52506629-52506648 | Msa1254370:CDS | 45.0% | |
| TTGGAGGGTTTACTCCAAAC+AGG | - | chr8_2:52506665-52506684 | None:intergenic | 45.0% | |
| !! | TTGGCGGATTCAGATAAAGC+AGG | - | chr8_2:52506725-52506744 | None:intergenic | 45.0% |
| GAAGGTTTCACCAATTCCTG+TGG | - | chr8_2:52506785-52506804 | None:intergenic | 45.0% | |
| GGAATTGGTGAAACCTTCCT+TGG | + | chr8_2:52506787-52506806 | Msa1254370:CDS | 45.0% | |
| AGGCAAGGTCGATAAATCCA+AGG | - | chr8_2:52506807-52506826 | None:intergenic | 45.0% | |
| AAATACCTGCGATTGAGGCA+AGG | - | chr8_2:52506822-52506841 | None:intergenic | 45.0% | |
| CTCTCCTCAGAAGCAAGTTA+AGG | + | chr8_2:52507135-52507154 | Msa1254370:CDS | 45.0% | |
| TCAAACACGTCTTCCAATGG+AGG | + | chr8_2:52507223-52507242 | Msa1254370:CDS | 45.0% | |
| ATGGAACATCTACCAAGAGC+TGG | + | chr8_2:52507325-52507344 | Msa1254370:CDS | 45.0% | |
| TCCGGTTCCTGGATGAATTT+CGG | - | chr8_2:52507378-52507397 | None:intergenic | 45.0% | |
| AATTCATCCAGGAACCGGAA+TGG | + | chr8_2:52507379-52507398 | Msa1254370:CDS | 45.0% | |
| ! | ATATAAGGTGGGATTGGTGG+CGG | - | chr8_2:52507598-52507617 | None:intergenic | 45.0% |
| CCACCAATCCCACCTTATAT+GGG | + | chr8_2:52507598-52507617 | Msa1254370:CDS | 45.0% | |
| CCATATGAGCCCATATAAGG+TGG | - | chr8_2:52507610-52507629 | None:intergenic | 45.0% | |
| CCACCTTATATGGGCTCATA+TGG | + | chr8_2:52507607-52507626 | Msa1254370:CDS | 45.0% | |
| TGCACAAACGGTACACTTCT+CGG | - | chr8_2:52507762-52507781 | None:intergenic | 45.0% | |
| GCAACGACACATACTTGAAG+AGG | + | chr8_2:52507985-52508004 | Msa1254370:CDS | 45.0% | |
| GAAGAGGAACATGGATGATC+AGG | + | chr8_2:52508001-52508020 | Msa1254370:CDS | 45.0% | |
| !!! | CAGCAATTTTGGGACGAAAG+GGG | - | chr8_2:52508381-52508400 | None:intergenic | 45.0% |
| !!! | CTCAGCAATTTTGGGACGAA+AGG | - | chr8_2:52508383-52508402 | None:intergenic | 45.0% |
| ! | GGCGTCTTCTCAGCAATTTT+GGG | - | chr8_2:52508391-52508410 | None:intergenic | 45.0% |
| ! | TGGCGTCTTCTCAGCAATTT+TGG | - | chr8_2:52508392-52508411 | None:intergenic | 45.0% |
| ! | GCGACTATGACCCCTTTTTA+GGG | - | chr8_2:52508420-52508439 | None:intergenic | 45.0% |
| ! | TGCGACTATGACCCCTTTTT+AGG | - | chr8_2:52508421-52508440 | None:intergenic | 45.0% |
| GACAAAAGTGACCCCTGTTT+AGG | - | chr8_2:52508514-52508533 | None:intergenic | 45.0% | |
| GAATATTGTTCGGATGAGGC+AGG | + | chr8_2:52509409-52509428 | Msa1254370:three_prime_UTR | 45.0% | |
| !!! | AATTGTAATTTTTTTAAATA+GGG | - | chr8_2:52508354-52508373 | None:intergenic | 5.0% |
| !!! | AAATTGTAATTTTTTTAAAT+AGG | - | chr8_2:52508355-52508374 | None:intergenic | 5.0% |
| !!! | ATTTAAAAAAATTACAATTT+TGG | + | chr8_2:52508355-52508374 | Msa1254370:intron | 5.0% |
| ! | GGCCATTGGATTGGGAATCA+GGG | - | chr8_2:52506468-52506487 | None:intergenic | 50.0% |
| ! | TGGCCATTGGATTGGGAATC+AGG | - | chr8_2:52506469-52506488 | None:intergenic | 50.0% |
| GCGTTCATGGCCATTGGATT+GGG | - | chr8_2:52506476-52506495 | None:intergenic | 50.0% | |
| AGCGTTCATGGCCATTGGAT+TGG | - | chr8_2:52506477-52506496 | None:intergenic | 50.0% | |
| ! | AACAATCTGGCTCCAAGGTG+CGG | - | chr8_2:52506513-52506532 | None:intergenic | 50.0% |
| TGACGGCGATGAATGAGGTA+CGG | - | chr8_2:52506555-52506574 | None:intergenic | 50.0% | |
| CCAAACAGGTCTCTTACCAC+CGG | - | chr8_2:52506651-52506670 | None:intergenic | 50.0% | |
| ! | GAAGAAGCAGCAGCATTGGA+GGG | - | chr8_2:52506680-52506699 | None:intergenic | 50.0% |
| ! | CTCCAATGCTGCTGCTTCTT+CGG | + | chr8_2:52506679-52506698 | Msa1254370:CDS | 50.0% |
| ATCTGAATCCGCCAAAGCTC+CGG | + | chr8_2:52506730-52506749 | Msa1254370:CDS | 50.0% | |
| !! | AATTCCTGTGGTGGTGATGG+CGG | - | chr8_2:52506773-52506792 | None:intergenic | 50.0% |
| ! | ACCAATTCCTGTGGTGGTGA+TGG | - | chr8_2:52506776-52506795 | None:intergenic | 50.0% |
| GGTTTCACCAATTCCTGTGG+TGG | - | chr8_2:52506782-52506801 | None:intergenic | 50.0% | |
| TATGATTGTGGGACCCTGGT+GGG | - | chr8_2:52507294-52507313 | None:intergenic | 50.0% | |
| TTATGATTGTGGGACCCTGG+TGG | - | chr8_2:52507295-52507314 | None:intergenic | 50.0% | |
| GAGTTATGATTGTGGGACCC+TGG | - | chr8_2:52507298-52507317 | None:intergenic | 50.0% | |
| TTGGGCACAAATCCAGCTCT+TGG | - | chr8_2:52507340-52507359 | None:intergenic | 50.0% | |
| GCCGAAATTCATCCAGGAAC+CGG | + | chr8_2:52507374-52507393 | Msa1254370:CDS | 50.0% | |
| CATTCCAGTCCTGATTTCCG+CGG | - | chr8_2:52507471-52507490 | None:intergenic | 50.0% | |
| ! | TATAAGGTGGGATTGGTGGC+GGG | - | chr8_2:52507597-52507616 | None:intergenic | 50.0% |
| GCCACCAATCCCACCTTATA+TGG | + | chr8_2:52507597-52507616 | Msa1254370:CDS | 50.0% | |
| CCCATATAAGGTGGGATTGG+TGG | - | chr8_2:52507601-52507620 | None:intergenic | 50.0% | |
| GAGCCCATATAAGGTGGGAT+TGG | - | chr8_2:52507604-52507623 | None:intergenic | 50.0% | |
| GTATGGTCCACCTTTGCATG+TGG | + | chr8_2:52507731-52507750 | Msa1254370:CDS | 50.0% | |
| ACAAACGGTACACTTCTCGG+AGG | - | chr8_2:52507759-52507778 | None:intergenic | 50.0% | |
| GTATGCAACTCAGAATCCGG+AGG | - | chr8_2:52507813-52507832 | None:intergenic | 50.0% | |
| GAACATGGATGATCAGGGCT+GGG | + | chr8_2:52508007-52508026 | Msa1254370:CDS | 50.0% | |
| ACGCCACGTGTCCCTAAAAA+GGG | + | chr8_2:52508406-52508425 | Msa1254370:intron | 50.0% | |
| !! | GAGGAAGCGTTCATGGCCAT+TGG | - | chr8_2:52506482-52506501 | None:intergenic | 55.0% |
| ! | GAGGCAACAATCTGGCTCCA+AGG | - | chr8_2:52506518-52506537 | None:intergenic | 55.0% |
| GACATCGACAACACTTCCGG+TGG | + | chr8_2:52506632-52506651 | Msa1254370:CDS | 55.0% | |
| CCGGTGGTAAGAGACCTGTT+TGG | + | chr8_2:52506648-52506667 | Msa1254370:CDS | 55.0% | |
| ! | CGAAGAAGCAGCAGCATTGG+AGG | - | chr8_2:52506681-52506700 | None:intergenic | 55.0% |
| GACCGAAGAAGCAGCAGCAT+TGG | - | chr8_2:52506684-52506703 | None:intergenic | 55.0% | |
| ! | TGCTGCTGCTTCTTCGGTCA+TGG | + | chr8_2:52506685-52506704 | Msa1254370:CDS | 55.0% |
| !! | CGGTCATGGATGCTGACTCA+TGG | + | chr8_2:52506699-52506718 | Msa1254370:CDS | 55.0% |
| GCCATCACCACCACAGGAAT+TGG | + | chr8_2:52506772-52506791 | Msa1254370:CDS | 55.0% | |
| ATCGACCTTGCCTCAATCGC+AGG | + | chr8_2:52506814-52506833 | Msa1254370:CDS | 55.0% | |
| TGAGGCGCAGACATTTGTGG+CGG | - | chr8_2:52507256-52507275 | None:intergenic | 55.0% | |
| CCTTGAGGCGCAGACATTTG+TGG | - | chr8_2:52507259-52507278 | None:intergenic | 55.0% | |
| CCACAAATGTCTGCGCCTCA+AGG | + | chr8_2:52507256-52507275 | Msa1254370:CDS | 55.0% | |
| GGGACAGCAACGAAACCTTG+AGG | - | chr8_2:52507274-52507293 | None:intergenic | 55.0% | |
| GTTTCGTTGCTGTCCCACCA+GGG | + | chr8_2:52507278-52507297 | Msa1254370:CDS | 55.0% | |
| CTGGATGAATTTCGGCGCTG+AGG | - | chr8_2:52507370-52507389 | None:intergenic | 55.0% | |
| ! | CTCAGCGCCGAAATTCATCC+AGG | + | chr8_2:52507368-52507387 | Msa1254370:CDS | 55.0% |
| TCATCCAGGAACCGGAATGG+CGG | + | chr8_2:52507382-52507401 | Msa1254370:CDS | 55.0% | |
| GTTGTAGACCACCGCCATTC+CGG | - | chr8_2:52507396-52507415 | None:intergenic | 55.0% | |
| ! | CTCTGGAAGCAGACGTGATC+AGG | + | chr8_2:52507444-52507463 | Msa1254370:CDS | 55.0% |
| TGATCAGGACCGCGGAAATC+AGG | + | chr8_2:52507459-52507478 | Msa1254370:CDS | 55.0% | |
| GGTGGAGGCCTTACAAACTG+TGG | - | chr8_2:52507547-52507566 | None:intergenic | 55.0% | |
| GCATGATTAGTAGGCGGTGG+AGG | - | chr8_2:52507562-52507581 | None:intergenic | 55.0% | |
| TGGGCATGATTAGTAGGCGG+TGG | - | chr8_2:52507565-52507584 | None:intergenic | 55.0% | |
| !! | TGGTGGCGGGGGATAGTATT+GGG | - | chr8_2:52507584-52507603 | None:intergenic | 55.0% |
| !! | TTGGTGGCGGGGGATAGTAT+TGG | - | chr8_2:52507585-52507604 | None:intergenic | 55.0% |
| !! | ATAAGGTGGGATTGGTGGCG+GGG | - | chr8_2:52507596-52507615 | None:intergenic | 55.0% |
| TGCAACTCAGAATCCGGAGG+TGG | - | chr8_2:52507810-52507829 | None:intergenic | 55.0% | |
| GGAACATGGATGATCAGGGC+TGG | + | chr8_2:52508006-52508025 | Msa1254370:CDS | 55.0% | |
| GACGCCACGTGTCCCTAAAA+AGG | + | chr8_2:52508405-52508424 | Msa1254370:intron | 55.0% | |
| CGCCACGTGTCCCTAAAAAG+GGG | + | chr8_2:52508407-52508426 | Msa1254370:intron | 55.0% | |
| !! | GACCCCTTTTTAGGGACACG+TGG | - | chr8_2:52508412-52508431 | None:intergenic | 55.0% |
| TGTTCGGATGAGGCAGGAAG+CGG | + | chr8_2:52509415-52509434 | Msa1254370:three_prime_UTR | 55.0% | |
| ! | AATCTGGCTCCAAGGTGCGG+CGG | - | chr8_2:52506510-52506529 | None:intergenic | 60.0% |
| CAGCGGTGGAGGCAACAATC+TGG | - | chr8_2:52506526-52506545 | None:intergenic | 60.0% | |
| ATGAGGTACGGCGGAAGCAG+CGG | - | chr8_2:52506543-52506562 | None:intergenic | 60.0% | |
| CGGCGATGAATGAGGTACGG+CGG | - | chr8_2:52506552-52506571 | None:intergenic | 60.0% | |
| ! | GGAGGTGACGGCGATGAATG+AGG | - | chr8_2:52506560-52506579 | None:intergenic | 60.0% |
| GAGGAAGGAGGAGGAGGTGA+CGG | - | chr8_2:52506572-52506591 | None:intergenic | 60.0% | |
| !! | GACGGCGAAAGTGTCGACAG+CGG | - | chr8_2:52506597-52506616 | None:intergenic | 60.0% |
| CGACACTTTCGCCGTCACTG+AGG | + | chr8_2:52506601-52506620 | Msa1254370:CDS | 60.0% | |
| CACTTTCGCCGTCACTGAGG+CGG | + | chr8_2:52506604-52506623 | Msa1254370:CDS | 60.0% | |
| ! | CGATTTCGCCGGAGCTTTGG+CGG | - | chr8_2:52506741-52506760 | None:intergenic | 60.0% |
| TGGCGATTTCGCCGGAGCTT+TGG | - | chr8_2:52506744-52506763 | None:intergenic | 60.0% | |
| CAGACATTTGTGGCGGCTGG+CGG | - | chr8_2:52507249-52507268 | None:intergenic | 60.0% | |
| GGTTTCGTTGCTGTCCCACC+AGG | + | chr8_2:52507277-52507296 | Msa1254370:CDS | 60.0% | |
| ! | CGGCGCTGAGGCTGATCATT+GGG | - | chr8_2:52507358-52507377 | None:intergenic | 60.0% |
| ! | TCGGCGCTGAGGCTGATCAT+TGG | - | chr8_2:52507359-52507378 | None:intergenic | 60.0% |
| GGTCTACAACCACGCGGAGA+TGG | + | chr8_2:52507406-52507425 | Msa1254370:CDS | 60.0% | |
| TGGTGAGAACCATCTCCGCG+TGG | - | chr8_2:52507418-52507437 | None:intergenic | 60.0% | |
| AGCAGACGTGATCAGGACCG+CGG | + | chr8_2:52507451-52507470 | Msa1254370:CDS | 60.0% | |
| AGGACCGCGGAAATCAGGAC+TGG | + | chr8_2:52507464-52507483 | Msa1254370:CDS | 60.0% | |
| !! | TAAGGTGGGATTGGTGGCGG+GGG | - | chr8_2:52507595-52507614 | None:intergenic | 60.0% |
| GGAGGCTCCACATGCAAAGG+TGG | - | chr8_2:52507741-52507760 | None:intergenic | 60.0% | |
| CTCGGAGGCTCCACATGCAA+AGG | - | chr8_2:52507744-52507763 | None:intergenic | 60.0% | |
| GTTCGGATGAGGCAGGAAGC+GGG | + | chr8_2:52509416-52509435 | Msa1254370:three_prime_UTR | 60.0% | |
| !! | GGCGGGAGAGGAAGCGTTCA+TGG | - | chr8_2:52506489-52506508 | None:intergenic | 65.0% |
| !! | GAAAGTGTCGACAGCGGCGG+AGG | - | chr8_2:52506591-52506610 | None:intergenic | 65.0% |
| !! | GGCGAAAGTGTCGACAGCGG+CGG | - | chr8_2:52506594-52506613 | None:intergenic | 65.0% |
| TTTCGCCGTCACTGAGGCGG+CGG | + | chr8_2:52506607-52506626 | Msa1254370:CDS | 65.0% | |
| GTCTTCCGCCGCCTCAGTGA+CGG | - | chr8_2:52506615-52506634 | None:intergenic | 65.0% | |
| !! | GGTGGTGGTGGCGATTTCGC+CGG | - | chr8_2:52506752-52506771 | None:intergenic | 65.0% |
| !! | TGTGGTGGTGATGGCGGTGG+TGG | - | chr8_2:52506767-52506786 | None:intergenic | 65.0% |
| ACCACCGCCATCACCACCAC+AGG | + | chr8_2:52506766-52506785 | Msa1254370:CDS | 65.0% | |
| !! | TCCTGTGGTGGTGATGGCGG+TGG | - | chr8_2:52506770-52506789 | None:intergenic | 65.0% |
| GCGCAGACATTTGTGGCGGC+TGG | - | chr8_2:52507252-52507271 | None:intergenic | 65.0% | |
| TCCAGGAACCGGAATGGCGG+TGG | + | chr8_2:52507385-52507404 | Msa1254370:CDS | 65.0% | |
| ACCACCGCCATTCCGGTTCC+TGG | - | chr8_2:52507389-52507408 | None:intergenic | 65.0% | |
| GGCGGTGGTCTACAACCACG+CGG | + | chr8_2:52507400-52507419 | Msa1254370:CDS | 65.0% | |
| TACGGCGGAAGCAGCGGTGG+AGG | - | chr8_2:52506537-52506556 | None:intergenic | 70.0% | |
| AGGTACGGCGGAAGCAGCGG+TGG | - | chr8_2:52506540-52506559 | None:intergenic | 70.0% | |
| ACAGCGGCGGAGGAAGGAGG+AGG | - | chr8_2:52506581-52506600 | None:intergenic | 70.0% | |
| TCGACAGCGGCGGAGGAAGG+AGG | - | chr8_2:52506584-52506603 | None:intergenic | 70.0% | |
| ! | GTGTCGACAGCGGCGGAGGA+AGG | - | chr8_2:52506587-52506606 | None:intergenic | 70.0% |
| !! | GGTGGTGATGGCGGTGGTGG+TGG | - | chr8_2:52506764-52506783 | None:intergenic | 70.0% |
| TGGCTCCAAGGTGCGGCGGC+GGG | - | chr8_2:52506506-52506525 | None:intergenic | 75.0% | |
| CTGGCTCCAAGGTGCGGCGG+CGG | - | chr8_2:52506507-52506526 | None:intergenic | 75.0% | |
| GCGGCGGAGGAAGGAGGAGG+AGG | - | chr8_2:52506578-52506597 | None:intergenic | 75.0% | |
| TGGCGGCTGGCGGCCTCCAT+TGG | - | chr8_2:52507239-52507258 | None:intergenic | 75.0% | |
| ! | CCAAGGTGCGGCGGCGGGAG+AGG | - | chr8_2:52506501-52506520 | None:intergenic | 80.0% |
| ! | CCTCTCCCGCCGCCGCACCT+TGG | + | chr8_2:52506498-52506517 | Msa1254370:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 52506392 | 52509790 | 52506392 | ID=Msa1254370;Name=Msa1254370 |
| chr8_2 | mRNA | 52506392 | 52509790 | 52506392 | ID=Msa1254370-mRNA-1;Parent=Msa1254370;Name=Msa1254370-mRNA-1;_AED=0.06;_eAED=0.06;_QI=90|1|1|1|0.83|0.71|7|262|451 |
| chr8_2 | exon | 52506392 | 52506835 | 52506392 | ID=Msa1254370-mRNA-1:exon:16088;Parent=Msa1254370-mRNA-1 |
| chr8_2 | exon | 52507115 | 52507637 | 52507115 | ID=Msa1254370-mRNA-1:exon:16089;Parent=Msa1254370-mRNA-1 |
| chr8_2 | exon | 52507712 | 52507865 | 52507712 | ID=Msa1254370-mRNA-1:exon:16090;Parent=Msa1254370-mRNA-1 |
| chr8_2 | exon | 52507971 | 52508061 | 52507971 | ID=Msa1254370-mRNA-1:exon:16091;Parent=Msa1254370-mRNA-1 |
| chr8_2 | exon | 52509009 | 52509080 | 52509009 | ID=Msa1254370-mRNA-1:exon:16092;Parent=Msa1254370-mRNA-1 |
| chr8_2 | exon | 52509217 | 52509620 | 52509217 | ID=Msa1254370-mRNA-1:exon:16093;Parent=Msa1254370-mRNA-1 |
| chr8_2 | exon | 52509771 | 52509790 | 52509771 | ID=Msa1254370-mRNA-1:exon:16094;Parent=Msa1254370-mRNA-1 |
| chr8_2 | five_prime_UTR | 52506392 | 52506481 | 52506392 | ID=Msa1254370-mRNA-1:five_prime_utr;Parent=Msa1254370-mRNA-1 |
| chr8_2 | CDS | 52506482 | 52506835 | 52506482 | ID=Msa1254370-mRNA-1:cds;Parent=Msa1254370-mRNA-1 |
| chr8_2 | CDS | 52507115 | 52507637 | 52507115 | ID=Msa1254370-mRNA-1:cds;Parent=Msa1254370-mRNA-1 |
| chr8_2 | CDS | 52507712 | 52507865 | 52507712 | ID=Msa1254370-mRNA-1:cds;Parent=Msa1254370-mRNA-1 |
| chr8_2 | CDS | 52507971 | 52508061 | 52507971 | ID=Msa1254370-mRNA-1:cds;Parent=Msa1254370-mRNA-1 |
| chr8_2 | CDS | 52509009 | 52509080 | 52509009 | ID=Msa1254370-mRNA-1:cds;Parent=Msa1254370-mRNA-1 |
| chr8_2 | CDS | 52509217 | 52509378 | 52509217 | ID=Msa1254370-mRNA-1:cds;Parent=Msa1254370-mRNA-1 |
| chr8_2 | three_prime_UTR | 52509379 | 52509620 | 52509379 | ID=Msa1254370-mRNA-1:three_prime_utr;Parent=Msa1254370-mRNA-1 |
| chr8_2 | three_prime_UTR | 52509771 | 52509790 | 52509771 | ID=Msa1254370-mRNA-1:three_prime_utr;Parent=Msa1254370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
