Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72312.t1 | AEX20344.1 | 100 | 434 | 0 | 0 | 1 | 434 | 1 | 434 | 3.00E-247 | 864 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72312.t1 | Q40977 | 89.5 | 430 | 45 | 0 | 4 | 433 | 3 | 432 | 8.0e-225 | 780.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72312.t1 | H2EIY4 | 100.0 | 434 | 0 | 0 | 1 | 434 | 1 | 434 | 2.1e-247 | 864.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene72312 | 0.840153 | 1.03E-57 | -1.69E-46 |
| MS.gene04917 | MS.gene72312 | 0.834783 | 2.45E-56 | -1.69E-46 |
| MS.gene049861 | MS.gene72312 | 0.830796 | 2.40E-55 | -1.69E-46 |
| MS.gene04991 | MS.gene72312 | -0.805139 | 1.54E-49 | -1.69E-46 |
| MS.gene050114 | MS.gene72312 | 0.809216 | 2.11E-50 | -1.69E-46 |
| MS.gene050317 | MS.gene72312 | 0.806544 | 7.81E-50 | -1.69E-46 |
| MS.gene050359 | MS.gene72312 | 0.80587 | 1.08E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene72312 | 0.812549 | 4.01E-51 | -1.69E-46 |
| MS.gene051122 | MS.gene72312 | 0.832153 | 1.11E-55 | -1.69E-46 |
| MS.gene051184 | MS.gene72312 | 0.837395 | 5.33E-57 | -1.69E-46 |
| MS.gene051831 | MS.gene72312 | 0.818847 | 1.58E-52 | -1.69E-46 |
| MS.gene051987 | MS.gene72312 | 0.845504 | 3.90E-59 | -1.69E-46 |
| MS.gene052580 | MS.gene72312 | 0.8651 | 7.55E-65 | -1.69E-46 |
| MS.gene053058 | MS.gene72312 | 0.804572 | 2.03E-49 | -1.69E-46 |
| MS.gene053216 | MS.gene72312 | 0.807799 | 4.24E-50 | -1.69E-46 |
| MS.gene055441 | MS.gene72312 | 0.81669 | 4.86E-52 | -1.69E-46 |
| MS.gene056787 | MS.gene72312 | 0.821826 | 3.28E-53 | -1.69E-46 |
| MS.gene056849 | MS.gene72312 | 0.966121 | 1.69E-125 | -1.69E-46 |
| MS.gene056975 | MS.gene72312 | 0.813597 | 2.36E-51 | -1.69E-46 |
| MS.gene057452 | MS.gene72312 | -0.823079 | 1.68E-53 | -1.69E-46 |
| MS.gene058054 | MS.gene72312 | 0.815636 | 8.35E-52 | -1.69E-46 |
| MS.gene058278 | MS.gene72312 | 0.822831 | 1.92E-53 | -1.69E-46 |
| MS.gene059050 | MS.gene72312 | 0.811311 | 7.46E-51 | -1.69E-46 |
| MS.gene060084 | MS.gene72312 | 0.856611 | 2.86E-62 | -1.69E-46 |
| MS.gene060297 | MS.gene72312 | 0.834004 | 3.85E-56 | -1.69E-46 |
| MS.gene060563 | MS.gene72312 | 0.816817 | 4.55E-52 | -1.69E-46 |
| MS.gene060850 | MS.gene72312 | 0.801275 | 9.72E-49 | -1.69E-46 |
| MS.gene060851 | MS.gene72312 | 0.818465 | 1.93E-52 | -1.69E-46 |
| MS.gene060852 | MS.gene72312 | 0.820121 | 8.11E-53 | -1.69E-46 |
| MS.gene060869 | MS.gene72312 | 0.823357 | 1.45E-53 | -1.69E-46 |
| MS.gene060870 | MS.gene72312 | 0.810942 | 8.97E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene72312 | MS.gene48483 | PPI |
| MS.gene72312 | MS.gene064542 | PPI |
| MS.gene72312 | MS.gene67091 | PPI |
| MS.gene72312 | MS.gene049230 | PPI |
| MS.gene24365 | MS.gene72312 | PPI |
| MS.gene72312 | MS.gene044004 | PPI |
| MS.gene72312 | MS.gene40946 | PPI |
| MS.gene72312 | MS.gene013259 | PPI |
| MS.gene72312 | MS.gene06344 | PPI |
| MS.gene72312 | MS.gene044005 | PPI |
| MS.gene035805 | MS.gene72312 | PPI |
| MS.gene72312 | MS.gene67151 | PPI |
| MS.gene72312 | MS.gene78401 | PPI |
| MS.gene72312 | MS.gene73119 | PPI |
| MS.gene72312 | MS.gene062762 | PPI |
| MS.gene72312 | MS.gene45537 | PPI |
| MS.gene72312 | MS.gene31111 | PPI |
| MS.gene72312 | MS.gene052072 | PPI |
| MS.gene72312 | MS.gene054624 | PPI |
| MS.gene72312 | MS.gene013003 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72312.t1 | MTR_1g060620 | 97.926 | 434 | 9 | 0 | 1 | 434 | 1 | 434 | 0.0 | 863 |
| MS.gene72312.t1 | MTR_7g034715 | 55.374 | 428 | 186 | 3 | 4 | 431 | 3 | 425 | 1.61e-172 | 492 |
| MS.gene72312.t1 | MTR_8g098910 | 46.028 | 428 | 206 | 8 | 2 | 417 | 56 | 470 | 1.93e-118 | 355 |
| MS.gene72312.t1 | MTR_8g098910 | 46.028 | 428 | 206 | 8 | 2 | 417 | 47 | 461 | 2.07e-118 | 354 |
| MS.gene72312.t1 | MTR_8g098910 | 46.731 | 413 | 195 | 8 | 2 | 402 | 56 | 455 | 2.32e-115 | 346 |
| MS.gene72312.t1 | MTR_8g098910 | 46.731 | 413 | 195 | 8 | 2 | 402 | 47 | 446 | 2.40e-115 | 345 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72312.t1 | AT3G52880 | 78.291 | 433 | 94 | 0 | 1 | 433 | 1 | 433 | 0.0 | 688 |
| MS.gene72312.t1 | AT3G52880 | 72.747 | 466 | 95 | 1 | 1 | 434 | 1 | 466 | 0.0 | 672 |
| MS.gene72312.t1 | AT5G03630 | 74.651 | 430 | 109 | 0 | 3 | 432 | 4 | 433 | 0.0 | 650 |
| MS.gene72312.t1 | AT3G09940 | 65.820 | 433 | 147 | 1 | 3 | 434 | 4 | 436 | 0.0 | 570 |
| MS.gene72312.t1 | AT3G09940 | 65.127 | 433 | 142 | 2 | 3 | 434 | 4 | 428 | 0.0 | 558 |
| MS.gene72312.t1 | AT3G27820 | 55.012 | 429 | 186 | 4 | 4 | 431 | 3 | 425 | 1.10e-158 | 457 |
| MS.gene72312.t1 | AT1G63940 | 45.902 | 427 | 208 | 7 | 1 | 417 | 56 | 469 | 7.62e-123 | 366 |
| MS.gene72312.t1 | AT1G63940 | 45.902 | 427 | 208 | 7 | 1 | 417 | 49 | 462 | 7.86e-123 | 365 |
| MS.gene72312.t1 | AT1G63940 | 44.965 | 427 | 208 | 7 | 1 | 417 | 49 | 458 | 1.71e-118 | 354 |
| MS.gene72312.t1 | AT1G63940 | 47.312 | 372 | 178 | 6 | 1 | 362 | 49 | 412 | 1.26e-108 | 327 |
Find 115 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATCATCAAAGCCTAATTT+TGG | 0.178444 | 1.4:-49693631 | MS.gene72312:CDS |
| GCAGCTCCTGCTAGACTTCC+TGG | 0.182558 | 1.4:-49695396 | MS.gene72312:intron |
| ATCCAGTATGTTCCAAAATT+AGG | 0.241603 | 1.4:+49693619 | None:intergenic |
| CCTTTCTCATTGTACCATTC+TGG | 0.242015 | 1.4:+49695333 | None:intergenic |
| AAAATATCTTTAAAATTTAC+TGG | 0.242138 | 1.4:+49693462 | None:intergenic |
| GAAGTTATATACCGCTTCTT+TGG | 0.253487 | 1.4:+49696487 | None:intergenic |
| CACTTACTGCACCAAGGTTC+TGG | 0.254429 | 1.4:+49694717 | None:intergenic |
| TGAGGGATATTATGCAAATA+AGG | 0.254901 | 1.4:-49694565 | MS.gene72312:CDS |
| ATTAAAGACGGGAAAGTTAT+TGG | 0.257644 | 1.4:-49693598 | MS.gene72312:CDS |
| CAAACTTACACTCCGGAAAA+AGG | 0.272710 | 1.4:+49695681 | None:intergenic |
| GTTGGTGACACAGTGCTATT+TGG | 0.278134 | 1.4:-49693667 | MS.gene72312:CDS |
| TCCTGCCTCTGCTGCAATGA+TGG | 0.311126 | 1.4:+49693771 | None:intergenic |
| CTTCAACCTGCCCTTTGAAT+AGG | 0.313300 | 1.4:+49694310 | None:intergenic |
| ATGGGAAAGCTGTGGTTGTT+GGG | 0.325418 | 1.4:-49694809 | MS.gene72312:CDS |
| TTCAACCTGCCCTTTGAATA+GGG | 0.331938 | 1.4:+49694311 | None:intergenic |
| AGCAAGGGAGTTTGTGAAAC+AGG | 0.334221 | 1.4:-49696540 | MS.gene72312:CDS |
| GTTATAAGGTTGACCGATTT+CGG | 0.348452 | 1.4:-49694921 | MS.gene72312:CDS |
| AGGAGTTCCGCCCTCCAAAA+AGG | 0.369207 | 1.4:+49693573 | None:intergenic |
| GCAATAGCTTTGTTCTCATC+AGG | 0.370142 | 1.4:+49693553 | None:intergenic |
| TACCTCTCCATCGGAATTAG+AGG | 0.382642 | 1.4:+49694503 | None:intergenic |
| GAGGGATATTATGCAAATAA+GGG | 0.399575 | 1.4:-49694564 | MS.gene72312:CDS |
| CCCGCTCATTTGATCTGTCT+TGG | 0.402893 | 1.4:-49693708 | MS.gene72312:CDS |
| AATGGGAAAGCTGTGGTTGT+TGG | 0.405868 | 1.4:-49694810 | MS.gene72312:CDS |
| AGCTCCTTCTACACCGAAAT+CGG | 0.406909 | 1.4:+49694908 | None:intergenic |
| GATTGCCTCGTACAATTTGT+CGG | 0.408450 | 1.4:+49694845 | None:intergenic |
| TTCCATACCTGTGTTGGAAG+TGG | 0.409257 | 1.4:-49695372 | MS.gene72312:CDS |
| GGGAGTTAAGCCTGGGGAGC+TGG | 0.410028 | 1.4:-49696519 | MS.gene72312:CDS |
| TTGACCGATTTCGGTGTAGA+AGG | 0.410797 | 1.4:-49694912 | MS.gene72312:CDS |
| AATGAGCGGGAATAGAAGTA+TGG | 0.414692 | 1.4:+49693721 | None:intergenic |
| CAGCTCCTGCTAGACTTCCT+GGG | 0.431228 | 1.4:-49695395 | MS.gene72312:CDS |
| TCCATACCTGTGTTGGAAGT+GGG | 0.433327 | 1.4:-49695371 | MS.gene72312:CDS |
| AACATTCAAATACCAGACTT+TGG | 0.436365 | 1.4:-49695059 | MS.gene72312:CDS |
| GATATGATTGCCAGCTCCCC+AGG | 0.439711 | 1.4:+49696509 | None:intergenic |
| CTTAGAGCAGGACGTTCATA+AGG | 0.442351 | 1.4:+49695713 | None:intergenic |
| TGCTCGCAAATCAGCTGAGC+AGG | 0.448272 | 1.4:-49694049 | MS.gene72312:CDS |
| AAATTAGGCTTTGATGATGC+AGG | 0.450521 | 1.4:+49693634 | None:intergenic |
| CAGACTTTGGTTATTGCAAC+GGG | 0.454674 | 1.4:-49695046 | MS.gene72312:CDS |
| GTGAAACAGGGAGTTAAGCC+TGG | 0.456583 | 1.4:-49696527 | MS.gene72312:CDS |
| ACTAAAGGACGGAAGGGTAC+TGG | 0.464010 | 1.4:-49694379 | MS.gene72312:CDS |
| GATATCGTTGTTGTTGGTGT+TGG | 0.464393 | 1.4:-49694351 | MS.gene72312:CDS |
| CTCAAATATCCCTATTCAAA+GGG | 0.465069 | 1.4:-49694320 | MS.gene72312:CDS |
| ATTAAAGGAACTGTTGCTAC+TGG | 0.465914 | 1.4:-49694531 | MS.gene72312:CDS |
| AGAGGAGAAGGGTGGAATCA+AGG | 0.470693 | 1.4:-49694289 | MS.gene72312:intron |
| ACTTACTGCACCAAGGTTCT+GGG | 0.472875 | 1.4:+49694718 | None:intergenic |
| ACCTCATTGTACAATTTCAA+AGG | 0.474444 | 1.4:+49694096 | None:intergenic |
| GCAATCAAAGGAAAGAAGAA+TGG | 0.475038 | 1.4:-49694828 | MS.gene72312:CDS |
| ATCGTTGTTGTTGGTGTTGG+AGG | 0.475278 | 1.4:-49694348 | MS.gene72312:CDS |
| TGGGAAAGCTGTGGTTGTTG+GGG | 0.478224 | 1.4:-49694808 | MS.gene72312:CDS |
| AAATCTCTGACTAGTGCAAA+AGG | 0.484247 | 1.4:-49695085 | MS.gene72312:CDS |
| GATCTGTCTTGGCAATTCTA+CGG | 0.487729 | 1.4:-49693697 | MS.gene72312:CDS |
| CAATCAAAGGAAAGAAGAAT+GGG | 0.494313 | 1.4:-49694827 | MS.gene72312:CDS |
| CCTCATTGTACAATTTCAAA+GGG | 0.496085 | 1.4:+49694097 | None:intergenic |
| ATCAGCTGAGCAGGCTGCGA+AGG | 0.503643 | 1.4:-49694040 | MS.gene72312:intron |
| CCCCACTTCCAACACAGGTA+TGG | 0.504218 | 1.4:+49695370 | None:intergenic |
| CCTGGGTTCCATACCTGTGT+TGG | 0.504798 | 1.4:-49695378 | MS.gene72312:CDS |
| CCTCAAATATCCCTATTCAA+AGG | 0.504920 | 1.4:-49694321 | MS.gene72312:CDS |
| GCCATCATTGCAGCAGAGGC+AGG | 0.506274 | 1.4:-49693772 | MS.gene72312:CDS |
| TGATTCACATCCTTCACTGC+AGG | 0.508882 | 1.4:+49693511 | None:intergenic |
| AGGGCAGGTTGAAGAGGAGA+AGG | 0.510981 | 1.4:-49694301 | MS.gene72312:CDS |
| CCGTTGCAATAACCAAAGTC+TGG | 0.512143 | 1.4:+49695047 | None:intergenic |
| CAGGTTGAAGAGGAGAAGGG+TGG | 0.514261 | 1.4:-49694297 | MS.gene72312:CDS |
| TTCAAGTACATCATCGTTGG+TGG | 0.514305 | 1.4:-49697055 | MS.gene72312:CDS |
| CCCTTTGAAATTGTACAATG+AGG | 0.515845 | 1.4:-49694097 | MS.gene72312:CDS |
| TGAAATAGCTGCGTTCTATG+AGG | 0.518052 | 1.4:-49694583 | MS.gene72312:CDS |
| CCTTTGAATAGGGATATTTG+AGG | 0.518462 | 1.4:+49694321 | None:intergenic |
| CCAGACTTTGGTTATTGCAA+CGG | 0.522695 | 1.4:-49695047 | MS.gene72312:CDS |
| AAGTACATCATCGTTGGTGG+TGG | 0.527872 | 1.4:-49697052 | MS.gene72312:CDS |
| CCATACCTGTGTTGGAAGTG+GGG | 0.529148 | 1.4:-49695370 | MS.gene72312:CDS |
| AATATCCCTATTCAAAGGGC+AGG | 0.530083 | 1.4:-49694316 | MS.gene72312:CDS |
| GAAGCAGATATCGTTGTTGT+TGG | 0.531051 | 1.4:-49694357 | MS.gene72312:CDS |
| TGAAACAGGGAGTTAAGCCT+GGG | 0.531517 | 1.4:-49696526 | MS.gene72312:CDS |
| AGGTAAGCCTTGCTTAGAGC+AGG | 0.532956 | 1.4:+49695701 | None:intergenic |
| GGAACATACTGGATTAAAGA+CGG | 0.545200 | 1.4:-49693610 | MS.gene72312:CDS |
| GGTAAAAGAAGTCAAACTAA+AGG | 0.545234 | 1.4:-49694394 | MS.gene72312:CDS |
| TGGAACCCAGGAAGTCTAGC+AGG | 0.547573 | 1.4:+49695390 | None:intergenic |
| GAACATACTGGATTAAAGAC+GGG | 0.548378 | 1.4:-49693609 | MS.gene72312:CDS |
| CCAGAATGGTACAATGAGAA+AGG | 0.552633 | 1.4:-49695333 | MS.gene72312:intron |
| AAGTCAAACTAAAGGACGGA+AGG | 0.553804 | 1.4:-49694386 | MS.gene72312:CDS |
| GAAATAGCTGCGTTCTATGA+GGG | 0.560533 | 1.4:-49694582 | MS.gene72312:CDS |
| GCCAAGACAGATCAAATGAG+CGG | 0.563154 | 1.4:+49693707 | None:intergenic |
| AAGAGCATTGCCTGCAGTGA+AGG | 0.564265 | 1.4:-49693521 | MS.gene72312:CDS |
| GTTTCCAATGTATATGCTGT+TGG | 0.565674 | 1.4:-49694135 | MS.gene72312:CDS |
| TCATTCAAGTACATCATCGT+TGG | 0.568162 | 1.4:-49697058 | MS.gene72312:CDS |
| CCAAGACAGATCAAATGAGC+GGG | 0.570191 | 1.4:+49693708 | None:intergenic |
| GTGAATCAACTTGCAAAGGA+AGG | 0.570354 | 1.4:-49693496 | MS.gene72312:CDS |
| GGATGTGAATCAACTTGCAA+AGG | 0.570956 | 1.4:-49693500 | MS.gene72312:CDS |
| ATTCAAAGGGCAGGTTGAAG+AGG | 0.578439 | 1.4:-49694307 | MS.gene72312:CDS |
| GAGAAAGATTGCTTCCAGAA+TGG | 0.579572 | 1.4:-49695347 | MS.gene72312:CDS |
| GCAGGCCATCATTGCAGCAG+AGG | 0.583036 | 1.4:-49693776 | MS.gene72312:intron |
| AAATTGTACGAGGCAATCAA+AGG | 0.584541 | 1.4:-49694840 | MS.gene72312:CDS |
| GGATTCACCTCTAATTCCGA+TGG | 0.584598 | 1.4:-49694510 | MS.gene72312:CDS |
| GGGAAAGCTGTGGTTGTTGG+GGG | 0.584691 | 1.4:-49694807 | MS.gene72312:CDS |
| AATTGTAGGGTTATGCAGCA+AGG | 0.585751 | 1.4:-49696556 | MS.gene72312:intron |
| CAATTCTACGGCGACAACGT+TGG | 0.592292 | 1.4:-49693685 | MS.gene72312:CDS |
| AGGGATATTATGCAAATAAG+GGG | 0.599658 | 1.4:-49694563 | MS.gene72312:CDS |
| ATTGTAGGGTTATGCAGCAA+GGG | 0.600524 | 1.4:-49696555 | MS.gene72312:intron |
| ATGCGGCCATACCTCTCCAT+CGG | 0.604691 | 1.4:+49694494 | None:intergenic |
| CACCTCTAATTCCGATGGAG+AGG | 0.604818 | 1.4:-49694505 | MS.gene72312:intron |
| ATCGCCAACAGCATATACAT+TGG | 0.608592 | 1.4:+49694131 | None:intergenic |
| CAATAATATTGATGTTACCA+TGG | 0.614036 | 1.4:-49694745 | MS.gene72312:CDS |
| CATACCTGTGTTGGAAGTGG+GGG | 0.614897 | 1.4:-49695369 | MS.gene72312:CDS |
| CCATGGTCTACCCAGAACCT+TGG | 0.617370 | 1.4:-49694728 | MS.gene72312:CDS |
| GGGCAGGTTGAAGAGGAGAA+GGG | 0.619159 | 1.4:-49694300 | MS.gene72312:CDS |
| GGCAATCATATCCAAAGAAG+CGG | 0.620227 | 1.4:-49696498 | MS.gene72312:intron |
| GCAAGGGAGTTTGTGAAACA+GGG | 0.620845 | 1.4:-49696539 | MS.gene72312:CDS |
| CCAACACAGGTATGGAACCC+AGG | 0.626347 | 1.4:+49695378 | None:intergenic |
| CCAAGGTTCTGGGTAGACCA+TGG | 0.634221 | 1.4:+49694728 | None:intergenic |
| AAAGAAGTCAAACTAAAGGA+CGG | 0.634551 | 1.4:-49694390 | MS.gene72312:CDS |
| TGAACGTCCTGCTCTAAGCA+AGG | 0.638367 | 1.4:-49695708 | MS.gene72312:CDS |
| AGTCAAACTAAAGGACGGAA+GGG | 0.640917 | 1.4:-49694385 | MS.gene72312:CDS |
| AAAGAAGAATGGGAAAGCTG+TGG | 0.672130 | 1.4:-49694817 | MS.gene72312:CDS |
| GGGATATTATGCAAATAAGG+GGG | 0.714196 | 1.4:-49694562 | MS.gene72312:CDS |
| AATGTCCACTTACTGCACCA+AGG | 0.718065 | 1.4:+49694711 | None:intergenic |
| TGATGCCGACAAATTGTACG+AGG | 0.731621 | 1.4:-49694850 | MS.gene72312:CDS |
| GAAACAGGGAGTTAAGCCTG+GGG | 0.761504 | 1.4:-49696525 | MS.gene72312:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAGAATTAAAATAAAATAA+GGG | + | chr1.4:49695253-49695272 | None:intergenic | 10.0% |
| !! | TTTCATTTAATTCTTATATT+TGG | - | chr1.4:49694104-49694123 | MS.gene72312:CDS | 10.0% |
| !!! | ATAAAATTTTAAACTTCATA+TGG | + | chr1.4:49694201-49694220 | None:intergenic | 10.0% |
| !!! | CAAAAATATATTTTATTTGA+GGG | - | chr1.4:49695661-49695680 | MS.gene72312:intron | 10.0% |
| !! | AGAATTAAAATAAAATAAGG+GGG | + | chr1.4:49695251-49695270 | None:intergenic | 15.0% |
| !! | AGATAAGTAAATATAAGAAT+GGG | - | chr1.4:49695331-49695350 | MS.gene72312:intron | 15.0% |
| !! | ATGAAAAAAAAAAACAAAAG+TGG | + | chr1.4:49694090-49694109 | None:intergenic | 15.0% |
| !! | CACAGAATTAAAATAAAATA+AGG | + | chr1.4:49695254-49695273 | None:intergenic | 15.0% |
| !! | CAGAATTAAAATAAAATAAG+GGG | + | chr1.4:49695252-49695271 | None:intergenic | 15.0% |
| !!! | ATTTGGTTATACTTTTTTAA+TGG | - | chr1.4:49694121-49694140 | MS.gene72312:CDS | 15.0% |
| !!! | CCAAAAATATATTTTATTTG+AGG | - | chr1.4:49695660-49695679 | MS.gene72312:intron | 15.0% |
| !!! | CCTCAAATAAAATATATTTT+TGG | + | chr1.4:49695663-49695682 | None:intergenic | 15.0% |
| !!! | GCATATCAATTAAATTTTTT+TGG | - | chr1.4:49693937-49693956 | MS.gene72312:intron | 15.0% |
| !!! | TTTTAATTCTGTGTTATATT+TGG | - | chr1.4:49695261-49695280 | MS.gene72312:intron | 15.0% |
| !!! | TTTTGAATTATATTTAGTGA+AGG | - | chr1.4:49695011-49695030 | MS.gene72312:intron | 15.0% |
| !! | AAAAAATTCACAAGAATCTA+CGG | + | chr1.4:49693589-49693608 | None:intergenic | 20.0% |
| !! | ATTGAAACAAGAATAAAGAT+TGG | + | chr1.4:49693541-49693560 | None:intergenic | 20.0% |
| !! | GAGATAAGTAAATATAAGAA+TGG | - | chr1.4:49695330-49695349 | MS.gene72312:intron | 20.0% |
| !! | GATATTAGAAATGTTACATT+CGG | - | chr1.4:49695540-49695559 | MS.gene72312:intron | 20.0% |
| !! | TCAAAAAAATTGATTGTGAT+TGG | - | chr1.4:49693887-49693906 | MS.gene72312:intron | 20.0% |
| !! | TGTAACAATTCTATGTTAAA+GGG | - | chr1.4:49693634-49693653 | MS.gene72312:CDS | 20.0% |
| !! | TTTGTGAGTAAATATTCTAT+AGG | - | chr1.4:49694366-49694385 | MS.gene72312:CDS | 20.0% |
| !!! | AAATATATTTTATTTGAGGG+AGG | - | chr1.4:49695664-49695683 | MS.gene72312:intron | 20.0% |
| !!! | AATCACAATCAATTTTTTTG+AGG | + | chr1.4:49693888-49693907 | None:intergenic | 20.0% |
| !!! | ATCACAATCAATTTTTTTGA+GGG | + | chr1.4:49693887-49693906 | None:intergenic | 20.0% |
| !!! | ATGGTTTTCAGAATAAATAT+TGG | - | chr1.4:49695284-49695303 | MS.gene72312:intron | 20.0% |
| !!! | GTAAAAATTCGAAATTTTTC+AGG | + | chr1.4:49694626-49694645 | None:intergenic | 20.0% |
| !!! | TACTAATAATTTTGTTTTGC+AGG | - | chr1.4:49695598-49695617 | MS.gene72312:intron | 20.0% |
| !!! | TGGTTTTCAGAATAAATATT+GGG | - | chr1.4:49695285-49695304 | MS.gene72312:intron | 20.0% |
| !!! | TTTTTTGGATTGAATAATTG+AGG | - | chr1.4:49693952-49693971 | MS.gene72312:intron | 20.0% |
| ! | AACCAAAATGATTTCAAAAC+TGG | + | chr1.4:49696615-49696634 | None:intergenic | 25.0% |
| ! | AAGTTACGCAAAATTTGATT+AGG | + | chr1.4:49696113-49696132 | None:intergenic | 25.0% |
| ! | AATTCTGTGTTATATTTGGA+TGG | - | chr1.4:49695265-49695284 | MS.gene72312:intron | 25.0% |
| ! | ACCAAAATGATTTCAAAACT+GGG | + | chr1.4:49696614-49696633 | None:intergenic | 25.0% |
| ! | AGATACATATCATGAAATTC+AGG | + | chr1.4:49694538-49694557 | None:intergenic | 25.0% |
| ! | ATCCAACTTAATGTTACAAT+TGG | - | chr1.4:49695116-49695135 | MS.gene72312:CDS | 25.0% |
| ! | ATCCAATTGTAACATTAAGT+TGG | + | chr1.4:49695121-49695140 | None:intergenic | 25.0% |
| ! | CAATAATATTGATGTTACCA+TGG | - | chr1.4:49695796-49695815 | MS.gene72312:intron | 25.0% |
| ! | CTGTAACAATTCTATGTTAA+AGG | - | chr1.4:49693633-49693652 | MS.gene72312:CDS | 25.0% |
| ! | TAACATTTCTAATATCAGCA+AGG | + | chr1.4:49695536-49695555 | None:intergenic | 25.0% |
| ! | TAATTAACCCATAACAGAAT+GGG | + | chr1.4:49694933-49694952 | None:intergenic | 25.0% |
| ! | TATGTTAAAGGGATTAGAAT+CGG | - | chr1.4:49693645-49693664 | MS.gene72312:CDS | 25.0% |
| ! | TTAATTAACCCATAACAGAA+TGG | + | chr1.4:49694934-49694953 | None:intergenic | 25.0% |
| !! | AATTTTTCACAGTATTCACA+AGG | + | chr1.4:49693693-49693712 | None:intergenic | 25.0% |
| !! | ACGTGGTACAAAATTTTAAA+AGG | + | chr1.4:49694730-49694749 | None:intergenic | 25.0% |
| !! | ATTTTGTACCACGTATTTAT+TGG | - | chr1.4:49694736-49694755 | MS.gene72312:CDS | 25.0% |
| !! | TATCAATGATACATTTGTTG+TGG | - | chr1.4:49696353-49696372 | MS.gene72312:intron | 25.0% |
| !!! | ACTTTTTTAATGGTGATAGT+GGG | - | chr1.4:49694131-49694150 | MS.gene72312:CDS | 25.0% |
| !!! | AGGTGTTTTTTGAAATTGTA+GGG | - | chr1.4:49693972-49693991 | MS.gene72312:intron | 25.0% |
| !!! | ATGTGCTATTTAAACTTCAA+TGG | + | chr1.4:49695074-49695093 | None:intergenic | 25.0% |
| !!! | ATTTTGTTTTGCAGGTTATA+AGG | - | chr1.4:49695606-49695625 | MS.gene72312:intron | 25.0% |
| !!! | GGACATATTTTTGCATTTTT+AGG | - | chr1.4:49694680-49694699 | MS.gene72312:intron | 25.0% |
| !!! | TACTTTTTTAATGGTGATAG+TGG | - | chr1.4:49694130-49694149 | MS.gene72312:CDS | 25.0% |
| !!! | TTTGCTTTGCTTTGAATTTT+AGG | - | chr1.4:49693733-49693752 | MS.gene72312:CDS | 25.0% |
| !!! | TTTTTTTTTTGCTTTCATGC+AGG | - | chr1.4:49696747-49696766 | MS.gene72312:intron | 25.0% |
| AAAGAAGTCAAACTAAAGGA+CGG | - | chr1.4:49696151-49696170 | MS.gene72312:intron | 30.0% | |
| AAATTGAACCAATGATTGCA+GGG | - | chr1.4:49695385-49695404 | MS.gene72312:CDS | 30.0% | |
| AACATTCAAATACCAGACTT+TGG | - | chr1.4:49695482-49695501 | MS.gene72312:intron | 30.0% | |
| AATTAACCCATAACAGAATG+GGG | + | chr1.4:49694932-49694951 | None:intergenic | 30.0% | |
| ACCTCATTGTACAATTTCAA+AGG | + | chr1.4:49696448-49696467 | None:intergenic | 30.0% | |
| AGGGATATTATGCAAATAAG+GGG | - | chr1.4:49695978-49695997 | MS.gene72312:intron | 30.0% | |
| AGTAATTAGTATGCGCTAAA+AGG | + | chr1.4:49695582-49695601 | None:intergenic | 30.0% | |
| AGTGAAGGTTATGTTATCTT+GGG | - | chr1.4:49695026-49695045 | MS.gene72312:intron | 30.0% | |
| ATCCAGTATGTTCCAAAATT+AGG | + | chr1.4:49696925-49696944 | None:intergenic | 30.0% | |
| ATGAAATTCAGGAAATAGTG+TGG | + | chr1.4:49694527-49694546 | None:intergenic | 30.0% | |
| ATTAAAGACGGGAAAGTTAT+TGG | - | chr1.4:49696943-49696962 | MS.gene72312:intron | 30.0% | |
| ATTTCAGCAGTAAAAAGTCT+TGG | + | chr1.4:49695944-49695963 | None:intergenic | 30.0% | |
| CAAAAATATGTCCATCACAA+GGG | + | chr1.4:49694673-49694692 | None:intergenic | 30.0% | |
| CAATCAAAGGAAAGAAGAAT+GGG | - | chr1.4:49695714-49695733 | MS.gene72312:CDS | 30.0% | |
| CACAAAGGTAAGATATGTAA+GGG | + | chr1.4:49694799-49694818 | None:intergenic | 30.0% | |
| CCTCATTGTACAATTTCAAA+GGG | + | chr1.4:49696447-49696466 | None:intergenic | 30.0% | |
| CTCAAATATCCCTATTCAAA+GGG | - | chr1.4:49696221-49696240 | MS.gene72312:intron | 30.0% | |
| CTTAATAAGACACTTCCATA+TGG | + | chr1.4:49696692-49696711 | None:intergenic | 30.0% | |
| GAGGGATATTATGCAAATAA+GGG | - | chr1.4:49695977-49695996 | MS.gene72312:intron | 30.0% | |
| GGTAAAAGAAGTCAAACTAA+AGG | - | chr1.4:49696147-49696166 | MS.gene72312:intron | 30.0% | |
| GTAGAATTATGAAGATCGAT+CGG | + | chr1.4:49693567-49693586 | None:intergenic | 30.0% | |
| TAAATTGAACCAATGATTGC+AGG | - | chr1.4:49695384-49695403 | MS.gene72312:CDS | 30.0% | |
| TACAATGAGAAAGGTGAATT+TGG | - | chr1.4:49695217-49695236 | MS.gene72312:intron | 30.0% | |
| TAGTGAAGGTTATGTTATCT+TGG | - | chr1.4:49695025-49695044 | MS.gene72312:intron | 30.0% | |
| TGAGGGATATTATGCAAATA+AGG | - | chr1.4:49695976-49695995 | MS.gene72312:intron | 30.0% | |
| ! | AAACACATGTATCCTTTTTC+CGG | - | chr1.4:49696567-49696586 | MS.gene72312:intron | 30.0% |
| ! | ACATGTGTTTTGTGCATAAT+TGG | + | chr1.4:49696557-49696576 | None:intergenic | 30.0% |
| ! | TGGAGAAGCATAAATATGTA+GGG | + | chr1.4:49696537-49696556 | None:intergenic | 30.0% |
| ! | TTGGAGAAGCATAAATATGT+AGG | + | chr1.4:49696538-49696557 | None:intergenic | 30.0% |
| !! | CTATTTTAAAAGTCGTAGCA+AGG | + | chr1.4:49693802-49693821 | None:intergenic | 30.0% |
| !!! | ACCCAGTTTTGAAATCATTT+TGG | - | chr1.4:49696610-49696629 | MS.gene72312:intron | 30.0% |
| !!! | CTTTTTTAATGGTGATAGTG+GGG | - | chr1.4:49694132-49694151 | MS.gene72312:CDS | 30.0% |
| !!! | GAGGTGTTTTTTGAAATTGT+AGG | - | chr1.4:49693971-49693990 | MS.gene72312:intron | 30.0% |
| !!! | GGAAACATTTGTTTTGAAGA+AGG | + | chr1.4:49696392-49696411 | None:intergenic | 30.0% |
| !!! | TGAAATCATTTTGGTTCCTT+AGG | - | chr1.4:49696619-49696638 | MS.gene72312:intron | 30.0% |
| AAATCTCTGACTAGTGCAAA+AGG | - | chr1.4:49695456-49695475 | MS.gene72312:intron | 35.0% | |
| AAATTGTACGAGGCAATCAA+AGG | - | chr1.4:49695701-49695720 | MS.gene72312:CDS | 35.0% | |
| AAGGGGGTCAATATCATTAA+AGG | - | chr1.4:49695995-49696014 | MS.gene72312:intron | 35.0% | |
| AATAAGACACTTCCATATGG+AGG | + | chr1.4:49696689-49696708 | None:intergenic | 35.0% | |
| AATTGAACCAATGATTGCAG+GGG | - | chr1.4:49695386-49695405 | MS.gene72312:CDS | 35.0% | |
| ACAGAATGGGGGAAAATTAA+AGG | + | chr1.4:49694920-49694939 | None:intergenic | 35.0% | |
| AGCATTACAAACTTACACTC+CGG | + | chr1.4:49694870-49694889 | None:intergenic | 35.0% | |
| ATGATTTCAAAACTGGGTGT+CGG | + | chr1.4:49696608-49696627 | None:intergenic | 35.0% | |
| ATTAAAGGAACTGTTGCTAC+TGG | - | chr1.4:49696010-49696029 | MS.gene72312:intron | 35.0% | |
| ATTAACCCATAACAGAATGG+GGG | + | chr1.4:49694931-49694950 | None:intergenic | 35.0% | |
| CAAAAATCCATAACTGCACA+AGG | + | chr1.4:49694767-49694786 | None:intergenic | 35.0% | |
| CCTCAAATATCCCTATTCAA+AGG | - | chr1.4:49696220-49696239 | MS.gene72312:intron | 35.0% | |
| CCTTTGAATAGGGATATTTG+AGG | + | chr1.4:49696223-49696242 | None:intergenic | 35.0% | |
| GAACATACTGGATTAAAGAC+GGG | - | chr1.4:49696932-49696951 | MS.gene72312:intron | 35.0% | |
| GAAGTTATATACCGCTTCTT+TGG | + | chr1.4:49694057-49694076 | None:intergenic | 35.0% | |
| GAGAAAAACACAAGAGGATA+AGG | + | chr1.4:49694459-49694478 | None:intergenic | 35.0% | |
| GCAAAAATATGTCCATCACA+AGG | + | chr1.4:49694674-49694693 | None:intergenic | 35.0% | |
| GCAATCAAAGGAAAGAAGAA+TGG | - | chr1.4:49695713-49695732 | MS.gene72312:CDS | 35.0% | |
| GCACAAAGGTAAGATATGTA+AGG | + | chr1.4:49694800-49694819 | None:intergenic | 35.0% | |
| GGAAAATTAAAGGAGGAAAG+GGG | + | chr1.4:49694910-49694929 | None:intergenic | 35.0% | |
| GGAACATACTGGATTAAAGA+CGG | - | chr1.4:49696931-49696950 | MS.gene72312:intron | 35.0% | |
| GGGAAAATTAAAGGAGGAAA+GGG | + | chr1.4:49694911-49694930 | None:intergenic | 35.0% | |
| GGGATATTATGCAAATAAGG+GGG | - | chr1.4:49695979-49695998 | MS.gene72312:intron | 35.0% | |
| GGGTTATTGTGTCAAGTTAA+AGG | - | chr1.4:49695305-49695324 | MS.gene72312:intron | 35.0% | |
| GTTTCCAATGTATATGCTGT+TGG | - | chr1.4:49696406-49696425 | MS.gene72312:intron | 35.0% | |
| TAAATTTCTCGGGACGAATA+TGG | + | chr1.4:49694585-49694604 | None:intergenic | 35.0% | |
| TACATATCTTACCTTTGTGC+AGG | - | chr1.4:49694800-49694819 | MS.gene72312:CDS | 35.0% | |
| TCATTCAAGTACATCATCGT+TGG | - | chr1.4:49693483-49693502 | MS.gene72312:CDS | 35.0% | |
| TGTCCCATCACTAAATTTCT+CGG | + | chr1.4:49694596-49694615 | None:intergenic | 35.0% | |
| TTGATGGAGAAAAACACAAG+AGG | + | chr1.4:49694465-49694484 | None:intergenic | 35.0% | |
| ! | AACATGTGCATGTTGTTTGA+AGG | - | chr1.4:49694159-49694178 | MS.gene72312:CDS | 35.0% |
| ! | AATTTTCCCCCATTCTGTTA+TGG | - | chr1.4:49694922-49694941 | MS.gene72312:CDS | 35.0% |
| ! | ACATGCACAAACTTCTTTTC+TGG | - | chr1.4:49696662-49696681 | MS.gene72312:intron | 35.0% |
| ! | ACATGTGCATGTTGTTTGAA+GGG | - | chr1.4:49694160-49694179 | MS.gene72312:CDS | 35.0% |
| ! | ATTTTCCCCCATTCTGTTAT+GGG | - | chr1.4:49694923-49694942 | MS.gene72312:CDS | 35.0% |
| ! | GCATCATCAAAGCCTAATTT+TGG | - | chr1.4:49696910-49696929 | MS.gene72312:intron | 35.0% |
| ! | GTTATAAGGTTGACCGATTT+CGG | - | chr1.4:49695620-49695639 | MS.gene72312:intron | 35.0% |
| !! | AAATTAGGCTTTGATGATGC+AGG | + | chr1.4:49696910-49696929 | None:intergenic | 35.0% |
| !! | ACTTTCAACGTCTTGTTTGA+TGG | + | chr1.4:49694481-49694500 | None:intergenic | 35.0% |
| !! | CCCTTTGAAATTGTACAATG+AGG | - | chr1.4:49696444-49696463 | MS.gene72312:intron | 35.0% |
| !! | GAAAGTTATTGGTGCCTTTT+TGG | - | chr1.4:49696954-49696973 | MS.gene72312:intron | 35.0% |
| !!! | AGCCTAATTTTGGAACATAC+TGG | - | chr1.4:49696920-49696939 | MS.gene72312:intron | 35.0% |
| AAAGAAGAATGGGAAAGCTG+TGG | - | chr1.4:49695724-49695743 | MS.gene72312:intron | 40.0% | |
| AAGTCAAACTAAAGGACGGA+AGG | - | chr1.4:49696155-49696174 | MS.gene72312:intron | 40.0% | |
| AATATCCCTATTCAAAGGGC+AGG | - | chr1.4:49696225-49696244 | MS.gene72312:intron | 40.0% | |
| AATGAGCGGGAATAGAAGTA+TGG | + | chr1.4:49696823-49696842 | None:intergenic | 40.0% | |
| AATTGTAGGGTTATGCAGCA+AGG | - | chr1.4:49693985-49694004 | MS.gene72312:intron | 40.0% | |
| AGTCAAACTAAAGGACGGAA+GGG | - | chr1.4:49696156-49696175 | MS.gene72312:intron | 40.0% | |
| ATCGCCAACAGCATATACAT+TGG | + | chr1.4:49696413-49696432 | None:intergenic | 40.0% | |
| ATGCACAAATTCGCATGAGT+GGG | + | chr1.4:49695879-49695898 | None:intergenic | 40.0% | |
| ATTGTAGGGTTATGCAGCAA+GGG | - | chr1.4:49693986-49694005 | MS.gene72312:intron | 40.0% | |
| CAAACTTACACTCCGGAAAA+AGG | + | chr1.4:49694863-49694882 | None:intergenic | 40.0% | |
| CACAAGGGAATGATAGGTAA+GGG | + | chr1.4:49694658-49694677 | None:intergenic | 40.0% | |
| CAGACTTTGGTTATTGCAAC+GGG | - | chr1.4:49695495-49695514 | MS.gene72312:intron | 40.0% | |
| CCAGAATGGTACAATGAGAA+AGG | - | chr1.4:49695208-49695227 | MS.gene72312:intron | 40.0% | |
| CCAGACTTTGGTTATTGCAA+CGG | - | chr1.4:49695494-49695513 | MS.gene72312:intron | 40.0% | |
| CCTTTCTCATTGTACCATTC+TGG | + | chr1.4:49695211-49695230 | None:intergenic | 40.0% | |
| GAAATAGCTGCGTTCTATGA+GGG | - | chr1.4:49695959-49695978 | MS.gene72312:intron | 40.0% | |
| GAAGCAGATATCGTTGTTGT+TGG | - | chr1.4:49696184-49696203 | MS.gene72312:intron | 40.0% | |
| GAATGGGGGAAAATTAAAGG+AGG | + | chr1.4:49694917-49694936 | None:intergenic | 40.0% | |
| GAGAAAGATTGCTTCCAGAA+TGG | - | chr1.4:49695194-49695213 | MS.gene72312:intron | 40.0% | |
| GATATTCAGAGTGACAAGCA+AGG | + | chr1.4:49695099-49695118 | None:intergenic | 40.0% | |
| GATCTGTCTTGGCAATTCTA+CGG | - | chr1.4:49696844-49696863 | MS.gene72312:intron | 40.0% | |
| GATTGCCTCGTACAATTTGT+CGG | + | chr1.4:49695699-49695718 | None:intergenic | 40.0% | |
| GGATGTGAATCAACTTGCAA+AGG | - | chr1.4:49697041-49697060 | MS.gene72312:intron | 40.0% | |
| GGCAATCATATCCAAAGAAG+CGG | - | chr1.4:49694043-49694062 | MS.gene72312:CDS | 40.0% | |
| GGGGAAAATTAAAGGAGGAA+AGG | + | chr1.4:49694912-49694931 | None:intergenic | 40.0% | |
| GTAACTTTCATCCATCTGTC+AGG | - | chr1.4:49696126-49696145 | MS.gene72312:intron | 40.0% | |
| GTCCCATCACTAAATTTCTC+GGG | + | chr1.4:49694595-49694614 | None:intergenic | 40.0% | |
| GTCCCGAGAAATTTAGTGAT+GGG | - | chr1.4:49694590-49694609 | MS.gene72312:CDS | 40.0% | |
| GTGAATCAACTTGCAAAGGA+AGG | - | chr1.4:49697045-49697064 | MS.gene72312:CDS | 40.0% | |
| GTTAGTGATACCATATCCAG+AGG | - | chr1.4:49696274-49696293 | MS.gene72312:intron | 40.0% | |
| TACCTATCATTCCCTTGTGA+TGG | - | chr1.4:49694659-49694678 | MS.gene72312:intron | 40.0% | |
| TATGCACAAATTCGCATGAG+TGG | + | chr1.4:49695880-49695899 | None:intergenic | 40.0% | |
| TCACAAGGGAATGATAGGTA+AGG | + | chr1.4:49694659-49694678 | None:intergenic | 40.0% | |
| TGAAATAGCTGCGTTCTATG+AGG | - | chr1.4:49695958-49695977 | MS.gene72312:intron | 40.0% | |
| TGATTTCAAAACTGGGTGTC+GGG | + | chr1.4:49696607-49696626 | None:intergenic | 40.0% | |
| TGCATGTTCTGCTATGTAGA+AGG | + | chr1.4:49696649-49696668 | None:intergenic | 40.0% | |
| TGTTCTGCTATGTAGAAGGT+TGG | + | chr1.4:49696645-49696664 | None:intergenic | 40.0% | |
| TTCAACCTGCCCTTTGAATA+GGG | + | chr1.4:49696233-49696252 | None:intergenic | 40.0% | |
| TTCAAGTACATCATCGTTGG+TGG | - | chr1.4:49693486-49693505 | MS.gene72312:CDS | 40.0% | |
| ! | AAGCAAGGCTTACCTTTTTC+CGG | - | chr1.4:49694848-49694867 | MS.gene72312:CDS | 40.0% |
| ! | GACTTCTTTTACCTGACAGA+TGG | + | chr1.4:49696140-49696159 | None:intergenic | 40.0% |
| ! | GATATCGTTGTTGTTGGTGT+TGG | - | chr1.4:49696190-49696209 | MS.gene72312:intron | 40.0% |
| ! | TAGTCAGAGATTTTGCAGCA+AGG | + | chr1.4:49695449-49695468 | None:intergenic | 40.0% |
| !! | AGTTATTGGTGCCTTTTTGG+AGG | - | chr1.4:49696957-49696976 | MS.gene72312:intron | 40.0% |
| !! | GCAATAGCTTTGTTCTCATC+AGG | + | chr1.4:49696991-49697010 | None:intergenic | 40.0% |
| !! | GTTATTGGTGCCTTTTTGGA+GGG | - | chr1.4:49696958-49696977 | MS.gene72312:intron | 40.0% |
| !! | TTCTTTTCTGGTCCTCCATA+TGG | - | chr1.4:49696674-49696693 | MS.gene72312:intron | 40.0% |
| AACTGTACCCCTGCAATCAT+TGG | + | chr1.4:49695396-49695415 | None:intergenic | 45.0% | |
| AATGGGAAAGCTGTGGTTGT+TGG | - | chr1.4:49695731-49695750 | MS.gene72312:intron | 45.0% | |
| AATGTCCACTTACTGCACCA+AGG | + | chr1.4:49695833-49695852 | None:intergenic | 45.0% | |
| ACTTACTGCACCAAGGTTCT+GGG | + | chr1.4:49695826-49695845 | None:intergenic | 45.0% | |
| AGCAAGGGAGTTTGTGAAAC+AGG | - | chr1.4:49694001-49694020 | MS.gene72312:intron | 45.0% | |
| AGCTCCTTCTACACCGAAAT+CGG | + | chr1.4:49695636-49695655 | None:intergenic | 45.0% | |
| AGGCTCAGCCAATAAATACG+TGG | + | chr1.4:49694747-49694766 | None:intergenic | 45.0% | |
| ATAGGGATCATGCCGGAAAA+AGG | + | chr1.4:49696582-49696601 | None:intergenic | 45.0% | |
| ATGGGAAAGCTGTGGTTGTT+GGG | - | chr1.4:49695732-49695751 | MS.gene72312:intron | 45.0% | |
| CAGTATTCCGAGATCACATG+CGG | + | chr1.4:49696067-49696086 | None:intergenic | 45.0% | |
| CCAAGACAGATCAAATGAGC+GGG | + | chr1.4:49696836-49696855 | None:intergenic | 45.0% | |
| CCGTTGCAATAACCAAAGTC+TGG | + | chr1.4:49695497-49695516 | None:intergenic | 45.0% | |
| CGTCCCGAGAAATTTAGTGA+TGG | - | chr1.4:49694589-49694608 | MS.gene72312:CDS | 45.0% | |
| CTAATTCCGATGGAGAGGTA+TGG | - | chr1.4:49696041-49696060 | MS.gene72312:intron | 45.0% | |
| CTCGGAATACTGTCATGTGA+TGG | - | chr1.4:49696075-49696094 | MS.gene72312:intron | 45.0% | |
| CTTAGAGCAGGACGTTCATA+AGG | + | chr1.4:49694831-49694850 | None:intergenic | 45.0% | |
| CTTCAACCTGCCCTTTGAAT+AGG | + | chr1.4:49696234-49696253 | None:intergenic | 45.0% | |
| GCAAGGGAGTTTGTGAAACA+GGG | - | chr1.4:49694002-49694021 | MS.gene72312:intron | 45.0% | |
| GCCAAGACAGATCAAATGAG+CGG | + | chr1.4:49696837-49696856 | None:intergenic | 45.0% | |
| GGATTCACCTCTAATTCCGA+TGG | - | chr1.4:49696031-49696050 | MS.gene72312:intron | 45.0% | |
| GTCCATCACAAGGGAATGAT+AGG | + | chr1.4:49694664-49694683 | None:intergenic | 45.0% | |
| TAAAGCTTGACACAAGCCTC+TGG | + | chr1.4:49696293-49696312 | None:intergenic | 45.0% | |
| TACCTCTCCATCGGAATTAG+AGG | + | chr1.4:49696041-49696060 | None:intergenic | 45.0% | |
| TCCATACCTGTGTTGGAAGT+GGG | - | chr1.4:49695170-49695189 | MS.gene72312:intron | 45.0% | |
| TCCCACAAAATGAACAGCAC+TGG | + | chr1.4:49696726-49696745 | None:intergenic | 45.0% | |
| TGAAACAGGGAGTTAAGCCT+GGG | - | chr1.4:49694015-49694034 | MS.gene72312:intron | 45.0% | |
| TGATGCCGACAAATTGTACG+AGG | - | chr1.4:49695691-49695710 | MS.gene72312:CDS | 45.0% | |
| TGATTCACATCCTTCACTGC+AGG | + | chr1.4:49697033-49697052 | None:intergenic | 45.0% | |
| TTCCATACCTGTGTTGGAAG+TGG | - | chr1.4:49695169-49695188 | MS.gene72312:intron | 45.0% | |
| TTGACACAAGCCTCTGGATA+TGG | + | chr1.4:49696287-49696306 | None:intergenic | 45.0% | |
| ! | AAGTACATCATCGTTGGTGG+TGG | - | chr1.4:49693489-49693508 | MS.gene72312:CDS | 45.0% |
| ! | ATAAGGTGCTACCTGCACAA+AGG | + | chr1.4:49694814-49694833 | None:intergenic | 45.0% |
| ! | ATTCAAAGGGCAGGTTGAAG+AGG | - | chr1.4:49696234-49696253 | MS.gene72312:intron | 45.0% |
| ! | TTGACCGATTTCGGTGTAGA+AGG | - | chr1.4:49695629-49695648 | MS.gene72312:intron | 45.0% |
| !! | AAAACTGGGTGTCGGGATAT+AGG | + | chr1.4:49696600-49696619 | None:intergenic | 45.0% |
| !! | AAACTGGGTGTCGGGATATA+GGG | + | chr1.4:49696599-49696618 | None:intergenic | 45.0% |
| !! | ATCGTTGTTGTTGGTGTTGG+AGG | - | chr1.4:49696193-49696212 | MS.gene72312:intron | 45.0% |
| !! | CTATGTAGAAGGTTGGCCTA+AGG | + | chr1.4:49696638-49696657 | None:intergenic | 45.0% |
| !! | GCCAGTGCTGTTCATTTTGT+GGG | - | chr1.4:49696722-49696741 | MS.gene72312:intron | 45.0% |
| !! | GTTGGTGACACAGTGCTATT+TGG | - | chr1.4:49696874-49696893 | MS.gene72312:intron | 45.0% |
| !! | TGCCAGTGCTGTTCATTTTG+TGG | - | chr1.4:49696721-49696740 | MS.gene72312:intron | 45.0% |
| AGAGGAGAAGGGTGGAATCA+AGG | - | chr1.4:49696252-49696271 | MS.gene72312:intron | 50.0% | |
| AGGTAAGCCTTGCTTAGAGC+AGG | + | chr1.4:49694843-49694862 | None:intergenic | 50.0% | |
| CAATTCTACGGCGACAACGT+TGG | - | chr1.4:49696856-49696875 | MS.gene72312:intron | 50.0% | |
| CACAAATTCGCATGAGTGGG+AGG | + | chr1.4:49695876-49695895 | None:intergenic | 50.0% | |
| CACCTCTAATTCCGATGGAG+AGG | - | chr1.4:49696036-49696055 | MS.gene72312:intron | 50.0% | |
| CACTTACTGCACCAAGGTTC+TGG | + | chr1.4:49695827-49695846 | None:intergenic | 50.0% | |
| CATACCTGTGTTGGAAGTGG+GGG | - | chr1.4:49695172-49695191 | MS.gene72312:intron | 50.0% | |
| CCATACCTGTGTTGGAAGTG+GGG | - | chr1.4:49695171-49695190 | MS.gene72312:intron | 50.0% | |
| CCCGCTCATTTGATCTGTCT+TGG | - | chr1.4:49696833-49696852 | MS.gene72312:intron | 50.0% | |
| GAAACAGGGAGTTAAGCCTG+GGG | - | chr1.4:49694016-49694035 | MS.gene72312:intron | 50.0% | |
| GTGAAACAGGGAGTTAAGCC+TGG | - | chr1.4:49694014-49694033 | MS.gene72312:intron | 50.0% | |
| GTTGTTGGGGGAGGATACAT+TGG | - | chr1.4:49695746-49695765 | MS.gene72312:intron | 50.0% | |
| TCGGGATATAGGGATCATGC+CGG | + | chr1.4:49696589-49696608 | None:intergenic | 50.0% | |
| TGGGAAAGCTGTGGTTGTTG+GGG | - | chr1.4:49695733-49695752 | MS.gene72312:intron | 50.0% | |
| ! | ACTAAAGGACGGAAGGGTAC+TGG | - | chr1.4:49696162-49696181 | MS.gene72312:intron | 50.0% |
| ! | CAGAACCTTGGTGCAGTAAG+TGG | - | chr1.4:49695825-49695844 | MS.gene72312:intron | 50.0% |
| ! | TGAACGTCCTGCTCTAAGCA+AGG | - | chr1.4:49694833-49694852 | MS.gene72312:CDS | 50.0% |
| ! | TTGCAACGGGCTCAACTGTA+AGG | - | chr1.4:49695508-49695527 | MS.gene72312:intron | 50.0% |
| !! | AAGAGCATTGCCTGCAGTGA+AGG | - | chr1.4:49697020-49697039 | MS.gene72312:intron | 50.0% |
| !! | ATTGGTGCCTTTTTGGAGGG+CGG | - | chr1.4:49696961-49696980 | MS.gene72312:intron | 50.0% |
| AAAGCTGTGGTTGTTGGGGG+AGG | - | chr1.4:49695737-49695756 | MS.gene72312:intron | 55.0% | |
| AGGAGTTCCGCCCTCCAAAA+AGG | + | chr1.4:49696971-49696990 | None:intergenic | 55.0% | |
| ATGCGGCCATACCTCTCCAT+CGG | + | chr1.4:49696050-49696069 | None:intergenic | 55.0% | |
| CAGCTCCTGCTAGACTTCCT+GGG | - | chr1.4:49695146-49695165 | MS.gene72312:intron | 55.0% | |
| CCAACACAGGTATGGAACCC+AGG | + | chr1.4:49695166-49695185 | None:intergenic | 55.0% | |
| CCATGGTCTACCCAGAACCT+TGG | - | chr1.4:49695813-49695832 | MS.gene72312:intron | 55.0% | |
| CCCCACTTCCAACACAGGTA+TGG | + | chr1.4:49695174-49695193 | None:intergenic | 55.0% | |
| CCTGGGTTCCATACCTGTGT+TGG | - | chr1.4:49695163-49695182 | MS.gene72312:intron | 55.0% | |
| GATATGATTGCCAGCTCCCC+AGG | + | chr1.4:49694035-49694054 | None:intergenic | 55.0% | |
| GGGAAAGCTGTGGTTGTTGG+GGG | - | chr1.4:49695734-49695753 | MS.gene72312:intron | 55.0% | |
| GGTATGGCCGCATGTGATCT+CGG | - | chr1.4:49696057-49696076 | MS.gene72312:intron | 55.0% | |
| TCCTGCCTCTGCTGCAATGA+TGG | + | chr1.4:49696773-49696792 | None:intergenic | 55.0% | |
| TGCTCGCAAATCAGCTGAGC+AGG | - | chr1.4:49696492-49696511 | MS.gene72312:intron | 55.0% | |
| TGGAACCCAGGAAGTCTAGC+AGG | + | chr1.4:49695154-49695173 | None:intergenic | 55.0% | |
| TGGGGGAGGATACATTGGTC+TGG | - | chr1.4:49695751-49695770 | MS.gene72312:intron | 55.0% | |
| TTCTCCCCCACTTCCAACAC+AGG | + | chr1.4:49695179-49695198 | None:intergenic | 55.0% | |
| ! | AGGGCAGGTTGAAGAGGAGA+AGG | - | chr1.4:49696240-49696259 | MS.gene72312:intron | 55.0% |
| ! | CAGGTTGAAGAGGAGAAGGG+TGG | - | chr1.4:49696244-49696263 | MS.gene72312:intron | 55.0% |
| ! | GGCTGAGCCTTGTGCAGTTA+TGG | - | chr1.4:49694757-49694776 | MS.gene72312:CDS | 55.0% |
| ! | GGGCAGGTTGAAGAGGAGAA+GGG | - | chr1.4:49696241-49696260 | MS.gene72312:intron | 55.0% |
| !! | CCAAGGTTCTGGGTAGACCA+TGG | + | chr1.4:49695816-49695835 | None:intergenic | 55.0% |
| ATCAGCTGAGCAGGCTGCGA+AGG | - | chr1.4:49696501-49696520 | MS.gene72312:CDS | 60.0% | |
| GCAGCTCCTGCTAGACTTCC+TGG | - | chr1.4:49695145-49695164 | MS.gene72312:intron | 60.0% | |
| GCAGGCCATCATTGCAGCAG+AGG | - | chr1.4:49696765-49696784 | MS.gene72312:intron | 60.0% | |
| GCCATCATTGCAGCAGAGGC+AGG | - | chr1.4:49696769-49696788 | MS.gene72312:intron | 60.0% | |
| GGGAGTTAAGCCTGGGGAGC+TGG | - | chr1.4:49694022-49694041 | MS.gene72312:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 49693471 | 49697092 | 49693471 | ID=MS.gene72312 |
| chr1.4 | mRNA | 49693471 | 49697092 | 49693471 | ID=MS.gene72312.t1;Parent=MS.gene72312 |
| chr1.4 | exon | 49697042 | 49697092 | 49697042 | ID=MS.gene72312.t1.exon1;Parent=MS.gene72312.t1 |
| chr1.4 | CDS | 49697042 | 49697092 | 49697042 | ID=cds.MS.gene72312.t1;Parent=MS.gene72312.t1 |
| chr1.4 | exon | 49696499 | 49696570 | 49696499 | ID=MS.gene72312.t1.exon2;Parent=MS.gene72312.t1 |
| chr1.4 | CDS | 49696499 | 49696570 | 49696499 | ID=cds.MS.gene72312.t1;Parent=MS.gene72312.t1 |
| chr1.4 | exon | 49695690 | 49695741 | 49695690 | ID=MS.gene72312.t1.exon3;Parent=MS.gene72312.t1 |
| chr1.4 | CDS | 49695690 | 49695741 | 49695690 | ID=cds.MS.gene72312.t1;Parent=MS.gene72312.t1 |
| chr1.4 | exon | 49695334 | 49695414 | 49695334 | ID=MS.gene72312.t1.exon4;Parent=MS.gene72312.t1 |
| chr1.4 | CDS | 49695334 | 49695414 | 49695334 | ID=cds.MS.gene72312.t1;Parent=MS.gene72312.t1 |
| chr1.4 | exon | 49695039 | 49695157 | 49695039 | ID=MS.gene72312.t1.exon5;Parent=MS.gene72312.t1 |
| chr1.4 | CDS | 49695039 | 49695157 | 49695039 | ID=cds.MS.gene72312.t1;Parent=MS.gene72312.t1 |
| chr1.4 | exon | 49694724 | 49694943 | 49694724 | ID=MS.gene72312.t1.exon6;Parent=MS.gene72312.t1 |
| chr1.4 | CDS | 49694724 | 49694943 | 49694724 | ID=cds.MS.gene72312.t1;Parent=MS.gene72312.t1 |
| chr1.4 | exon | 49694506 | 49694624 | 49694506 | ID=MS.gene72312.t1.exon7;Parent=MS.gene72312.t1 |
| chr1.4 | CDS | 49694506 | 49694624 | 49694506 | ID=cds.MS.gene72312.t1;Parent=MS.gene72312.t1 |
| chr1.4 | exon | 49694290 | 49694415 | 49694290 | ID=MS.gene72312.t1.exon8;Parent=MS.gene72312.t1 |
| chr1.4 | CDS | 49694290 | 49694415 | 49694290 | ID=cds.MS.gene72312.t1;Parent=MS.gene72312.t1 |
| chr1.4 | exon | 49694041 | 49694181 | 49694041 | ID=MS.gene72312.t1.exon9;Parent=MS.gene72312.t1 |
| chr1.4 | CDS | 49694041 | 49694181 | 49694041 | ID=cds.MS.gene72312.t1;Parent=MS.gene72312.t1 |
| chr1.4 | exon | 49693471 | 49693794 | 49693471 | ID=MS.gene72312.t1.exon10;Parent=MS.gene72312.t1 |
| chr1.4 | CDS | 49693471 | 49693794 | 49693471 | ID=cds.MS.gene72312.t1;Parent=MS.gene72312.t1 |
| Gene Sequence |
| Protein sequence |
