Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017554.t1 | XP_003629183.2 | 91.2 | 375 | 33 | 0 | 1 | 375 | 1 | 375 | 2.20E-198 | 701.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017554.t1 | Q9SD05 | 48.6 | 360 | 173 | 7 | 20 | 371 | 11 | 366 | 9.7e-94 | 345.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017554.t1 | G7LA68 | 91.2 | 375 | 33 | 0 | 1 | 375 | 1 | 375 | 1.6e-198 | 701.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene27212 | MS.gene017554 | PPI |
| MS.gene23775 | MS.gene017554 | PPI |
| MS.gene034366 | MS.gene017554 | PPI |
| MS.gene23776 | MS.gene017554 | PPI |
| MS.gene032181 | MS.gene017554 | PPI |
| MS.gene017558 | MS.gene017554 | PPI |
| MS.gene98728 | MS.gene017554 | PPI |
| MS.gene037809 | MS.gene017554 | PPI |
| MS.gene35719 | MS.gene017554 | PPI |
| MS.gene23779 | MS.gene017554 | PPI |
| MS.gene85273 | MS.gene017554 | PPI |
| MS.gene27210 | MS.gene017554 | PPI |
| MS.gene052008 | MS.gene017554 | PPI |
| MS.gene27211 | MS.gene017554 | PPI |
| MS.gene017556 | MS.gene017554 | PPI |
| MS.gene059296 | MS.gene017554 | PPI |
| MS.gene037812 | MS.gene017554 | PPI |
| MS.gene037810 | MS.gene017554 | PPI |
| MS.gene017555 | MS.gene017554 | PPI |
| MS.gene017554 | MS.gene23779 | PPI |
| MS.gene017554 | MS.gene61630 | PPI |
| MS.gene66625 | MS.gene017554 | PPI |
| MS.gene23780 | MS.gene017554 | PPI |
| MS.gene061292 | MS.gene017554 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017554.t1 | MTR_8g074210 | 92.800 | 375 | 27 | 0 | 1 | 375 | 1 | 375 | 0.0 | 716 |
| MS.gene017554.t1 | MTR_8g074270 | 86.933 | 375 | 49 | 0 | 1 | 375 | 1 | 375 | 0.0 | 674 |
| MS.gene017554.t1 | MTR_8g074170 | 84.533 | 375 | 58 | 0 | 1 | 375 | 1 | 375 | 0.0 | 653 |
| MS.gene017554.t1 | MTR_1g075865 | 89.720 | 107 | 11 | 0 | 167 | 273 | 7 | 113 | 1.49e-66 | 207 |
| MS.gene017554.t1 | MTR_8g074320 | 55.330 | 197 | 68 | 2 | 49 | 241 | 42 | 222 | 1.50e-66 | 210 |
| MS.gene017554.t1 | MTR_2g042370 | 32.584 | 356 | 223 | 10 | 22 | 367 | 10 | 358 | 3.00e-52 | 177 |
| MS.gene017554.t1 | MTR_2g042430 | 32.670 | 352 | 221 | 10 | 22 | 364 | 22 | 366 | 3.23e-51 | 175 |
| MS.gene017554.t1 | MTR_2g042420 | 32.113 | 355 | 222 | 11 | 22 | 367 | 6 | 350 | 1.36e-50 | 173 |
| MS.gene017554.t1 | MTR_4g050190 | 33.434 | 332 | 188 | 7 | 63 | 361 | 55 | 386 | 4.10e-47 | 165 |
| MS.gene017554.t1 | MTR_2g087780 | 32.275 | 378 | 213 | 11 | 27 | 361 | 13 | 390 | 2.06e-45 | 160 |
| MS.gene017554.t1 | MTR_2g099030 | 32.890 | 301 | 157 | 7 | 73 | 329 | 77 | 376 | 7.67e-40 | 146 |
| MS.gene017554.t1 | MTR_7g490330 | 35.802 | 243 | 132 | 5 | 75 | 293 | 44 | 286 | 7.09e-39 | 141 |
| MS.gene017554.t1 | MTR_7g090300 | 32.087 | 321 | 176 | 9 | 76 | 361 | 51 | 364 | 3.29e-38 | 140 |
| MS.gene017554.t1 | MTR_7g490350 | 29.947 | 374 | 201 | 13 | 28 | 361 | 12 | 364 | 4.35e-37 | 138 |
| MS.gene017554.t1 | MTR_7g090320 | 30.514 | 331 | 189 | 7 | 76 | 365 | 56 | 386 | 5.78e-37 | 138 |
| MS.gene017554.t1 | MTR_7g090310 | 28.402 | 338 | 192 | 7 | 73 | 365 | 53 | 385 | 1.62e-35 | 134 |
| MS.gene017554.t1 | MTR_5g091980 | 34.298 | 242 | 135 | 5 | 76 | 293 | 46 | 287 | 8.84e-32 | 122 |
| MS.gene017554.t1 | MTR_8g074290 | 51.852 | 108 | 48 | 3 | 244 | 349 | 47 | 152 | 1.40e-30 | 114 |
| MS.gene017554.t1 | MTR_4g112670 | 33.195 | 241 | 137 | 5 | 76 | 292 | 37 | 277 | 2.54e-29 | 116 |
| MS.gene017554.t1 | MTR_4g112650 | 34.894 | 235 | 123 | 6 | 78 | 284 | 38 | 270 | 2.55e-29 | 116 |
| MS.gene017554.t1 | MTR_2g058450 | 31.489 | 235 | 136 | 4 | 78 | 287 | 40 | 274 | 1.67e-28 | 114 |
| MS.gene017554.t1 | MTR_4g112630 | 31.780 | 236 | 134 | 5 | 76 | 284 | 36 | 271 | 1.30e-25 | 105 |
| MS.gene017554.t1 | MTR_0003s0530 | 37.984 | 129 | 79 | 1 | 165 | 292 | 4 | 132 | 1.89e-22 | 94.4 |
| MS.gene017554.t1 | MTR_8g075500 | 81.250 | 48 | 9 | 0 | 95 | 142 | 173 | 220 | 3.41e-19 | 85.9 |
| MS.gene017554.t1 | MTR_2g058410 | 32.749 | 171 | 109 | 5 | 121 | 286 | 1 | 170 | 3.85e-19 | 85.9 |
| MS.gene017554.t1 | MTR_4g112840 | 34.694 | 98 | 64 | 0 | 195 | 292 | 63 | 160 | 1.09e-14 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017554.t1 | AT3G51430 | 48.333 | 360 | 174 | 7 | 20 | 371 | 11 | 366 | 2.28e-114 | 338 |
| MS.gene017554.t1 | AT3G51440 | 48.611 | 360 | 173 | 7 | 20 | 371 | 11 | 366 | 3.93e-114 | 337 |
| MS.gene017554.t1 | AT3G51420 | 47.778 | 360 | 176 | 7 | 20 | 371 | 11 | 366 | 1.58e-113 | 335 |
| MS.gene017554.t1 | AT3G51430 | 48.333 | 360 | 172 | 8 | 20 | 371 | 11 | 364 | 3.53e-113 | 335 |
| MS.gene017554.t1 | AT3G51450 | 47.632 | 359 | 176 | 7 | 21 | 371 | 12 | 366 | 5.85e-112 | 332 |
| MS.gene017554.t1 | AT3G59530 | 35.714 | 266 | 141 | 6 | 65 | 300 | 69 | 334 | 2.61e-43 | 155 |
| MS.gene017554.t1 | AT3G59530 | 35.714 | 266 | 141 | 6 | 65 | 300 | 69 | 334 | 2.61e-43 | 155 |
| MS.gene017554.t1 | AT3G59530 | 35.714 | 266 | 141 | 6 | 65 | 300 | 69 | 334 | 2.61e-43 | 155 |
| MS.gene017554.t1 | AT5G22020 | 32.099 | 324 | 188 | 8 | 75 | 366 | 72 | 395 | 3.12e-43 | 155 |
| MS.gene017554.t1 | AT5G22020 | 32.099 | 324 | 188 | 8 | 75 | 366 | 72 | 395 | 3.12e-43 | 155 |
| MS.gene017554.t1 | AT5G22020 | 32.099 | 324 | 188 | 8 | 75 | 366 | 72 | 395 | 3.12e-43 | 155 |
| MS.gene017554.t1 | AT1G08470 | 29.156 | 391 | 228 | 9 | 21 | 366 | 3 | 389 | 1.91e-42 | 152 |
| MS.gene017554.t1 | AT3G57030 | 30.218 | 321 | 180 | 9 | 78 | 361 | 56 | 369 | 8.93e-36 | 134 |
| MS.gene017554.t1 | AT2G41290 | 31.818 | 330 | 174 | 12 | 76 | 361 | 49 | 371 | 7.78e-31 | 121 |
| MS.gene017554.t1 | AT3G57020 | 29.032 | 310 | 194 | 8 | 76 | 365 | 51 | 354 | 9.83e-31 | 120 |
| MS.gene017554.t1 | AT3G57020 | 28.395 | 324 | 192 | 8 | 76 | 365 | 51 | 368 | 6.25e-30 | 118 |
| MS.gene017554.t1 | AT3G57010 | 27.795 | 331 | 199 | 8 | 76 | 372 | 52 | 376 | 9.27e-29 | 115 |
| MS.gene017554.t1 | AT1G74010 | 34.071 | 226 | 125 | 7 | 78 | 280 | 37 | 261 | 1.33e-26 | 108 |
| MS.gene017554.t1 | AT2G41300 | 29.493 | 217 | 148 | 4 | 118 | 329 | 133 | 349 | 3.64e-25 | 105 |
| MS.gene017554.t1 | AT1G74020 | 29.524 | 315 | 175 | 11 | 78 | 368 | 38 | 329 | 1.37e-24 | 103 |
| MS.gene017554.t1 | AT1G74000 | 30.870 | 230 | 136 | 6 | 74 | 280 | 36 | 265 | 3.22e-24 | 102 |
Find 93 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCACCGGTCAATGATAATT+TGG | 0.097254 | 8.3:+28685114 | None:intergenic |
| GGTTTCCTTCTAATATTTCT+AGG | 0.260269 | 8.3:+28686311 | None:intergenic |
| GCTTTGGGTGTAGTTTATAC+TGG | 0.281107 | 8.3:-28688961 | MS.gene017554:CDS |
| TATTACAAAAGGGTATAAAA+TGG | 0.302630 | 8.3:+28685060 | None:intergenic |
| ACCGCTGAGGCTATAATAAC+TGG | 0.323660 | 8.3:+28689144 | None:intergenic |
| TTGAAAATTATGTCCAGTTC+AGG | 0.323967 | 8.3:+28685262 | None:intergenic |
| GTTGCAGAGGGACAAGTTCT+TGG | 0.335418 | 8.3:-28689009 | MS.gene017554:CDS |
| TGTAGAGGTCTCTGAGTAGT+AGG | 0.338381 | 8.3:+28686242 | None:intergenic |
| CCATCATAATGAATGTTATC+AGG | 0.354766 | 8.3:+28685639 | None:intergenic |
| AGTTCTTGGACCTGAAGATT+TGG | 0.358218 | 8.3:-28688995 | MS.gene017554:CDS |
| GGATCATAGTAGTGTGTAGT+AGG | 0.366734 | 8.3:+28685136 | None:intergenic |
| GGTGAGACTGCAACTCCATT+AGG | 0.368711 | 8.3:+28686217 | None:intergenic |
| GTTTATACTGGCTGTGTAGA+TGG | 0.372424 | 8.3:-28688949 | MS.gene017554:CDS |
| ATGATGGACATGGGCAATAC+TGG | 0.373440 | 8.3:-28685623 | MS.gene017554:CDS |
| CTTAACAAGAACATGCGATT+AGG | 0.376850 | 8.3:-28689042 | MS.gene017554:CDS |
| ATGAATCGGTGGTTGAAGAT+TGG | 0.379468 | 8.3:-28688903 | MS.gene017554:CDS |
| CCACCGGTCAATGATAATTT+GGG | 0.399922 | 8.3:+28685115 | None:intergenic |
| GCATCGTATACCAAATCTTC+AGG | 0.409274 | 8.3:+28688985 | None:intergenic |
| GAGAATAACGGCGAATGAAT+CGG | 0.409910 | 8.3:-28688917 | MS.gene017554:CDS |
| TGAATCGGTGGTTGAAGATT+GGG | 0.416553 | 8.3:-28688902 | MS.gene017554:CDS |
| TGATGGTACTATTTATTTCA+CGG | 0.417335 | 8.3:-28686368 | MS.gene017554:CDS |
| TTTGGTATACGATGCTGCTT+TGG | 0.426280 | 8.3:-28688977 | MS.gene017554:CDS |
| TTGACCGGTGGGATAAAGAT+TGG | 0.426598 | 8.3:-28685103 | MS.gene017554:CDS |
| CGCATGTTCTTGTTAAGTAA+AGG | 0.427288 | 8.3:+28689048 | None:intergenic |
| ATGTCAAGACGTATTACAAA+AGG | 0.440880 | 8.3:+28685049 | None:intergenic |
| ATTTAAATTGTAGGTAGAGC+AGG | 0.441077 | 8.3:+28685016 | None:intergenic |
| TGAATGTTATCAGGCATGCC+AGG | 0.449090 | 8.3:+28685648 | None:intergenic |
| TTCCCCTCGACAAGCTAAAC+CGG | 0.460617 | 8.3:-28689086 | MS.gene017554:CDS |
| AGAGACCTCTACATTCCTAA+TGG | 0.460761 | 8.3:-28686232 | MS.gene017554:CDS |
| AGGTGGAAGACCACTTGGTT+TGG | 0.461808 | 8.3:-28688872 | MS.gene017554:CDS |
| TATGTCCAGTTCAGGAGAAA+AGG | 0.464132 | 8.3:+28685270 | None:intergenic |
| CCCTTTCATTAGGAAGGCTC+TGG | 0.465331 | 8.3:-28685236 | MS.gene017554:CDS |
| CAAATACCCTTTCATTAGGA+AGG | 0.472906 | 8.3:-28685242 | MS.gene017554:CDS |
| AGGAGTTATCACTGTGGACT+TGG | 0.473224 | 8.3:-28685167 | MS.gene017554:CDS |
| CCTGATAACATTCATTATGA+TGG | 0.474172 | 8.3:-28685639 | MS.gene017554:CDS |
| TTGGTATACGATGCTGCTTT+GGG | 0.482809 | 8.3:-28688976 | MS.gene017554:CDS |
| TCTCTACCGGCTCGACCCAT+TGG | 0.483164 | 8.3:-28689121 | MS.gene017554:CDS |
| TTTATACTGGCTGTGTAGAT+GGG | 0.489254 | 8.3:-28688948 | MS.gene017554:CDS |
| TGACCGGTGGGATAAAGATT+GGG | 0.494789 | 8.3:-28685102 | MS.gene017554:CDS |
| CCGGCTCGACCCATTGGAAC+CGG | 0.495600 | 8.3:-28689115 | MS.gene017554:CDS |
| AAGTAAAGGAACGGTTATAG+TGG | 0.496018 | 8.3:+28689062 | None:intergenic |
| AACACAGGTGGAAGACCACT+TGG | 0.510446 | 8.3:-28688877 | MS.gene017554:CDS |
| TATTGTTGCAGACGCAGATA+AGG | 0.510752 | 8.3:-28688827 | MS.gene017554:intron |
| TAGCCTCAGCGGTTCTCTAC+CGG | 0.511990 | 8.3:-28689134 | MS.gene017554:CDS |
| GCCAGAGCCTTCCTAATGAA+AGG | 0.517627 | 8.3:+28685235 | None:intergenic |
| TCTGTCCTAGAAATATTAGA+AGG | 0.518415 | 8.3:-28686316 | MS.gene017554:CDS |
| TAAAATTCAAAGTAACAGAT+GGG | 0.518625 | 8.3:-28686405 | MS.gene017554:CDS |
| GTACTTGCGACTGAGATTGA+TGG | 0.522065 | 8.3:-28686430 | MS.gene017554:CDS |
| TTGTCGAGGGGAAAATGAAC+CGG | 0.522550 | 8.3:+28689096 | None:intergenic |
| CTAAAATTCAAAGTAACAGA+TGG | 0.528363 | 8.3:-28686406 | MS.gene017554:CDS |
| GGAAAATGAACCGGTTCCAA+TGG | 0.529351 | 8.3:+28689105 | None:intergenic |
| GATCCCAAATTATCATTGAC+CGG | 0.533395 | 8.3:-28685118 | MS.gene017554:CDS |
| ATATTAGAAGGAAACCCTAA+TGG | 0.538643 | 8.3:-28686304 | MS.gene017554:CDS |
| AATCTGAATTTGTCAAAGAA+CGG | 0.538666 | 8.3:-28685190 | MS.gene017554:CDS |
| CCAAATTATCATTGACCGGT+GGG | 0.541326 | 8.3:-28685114 | MS.gene017554:CDS |
| CCAGAGCCTTCCTAATGAAA+GGG | 0.547179 | 8.3:+28685236 | None:intergenic |
| GGACATGGGCAATACTGGAT+TGG | 0.547757 | 8.3:-28685618 | MS.gene017554:CDS |
| GAAAATGAACCGGTTCCAAT+GGG | 0.552787 | 8.3:+28689106 | None:intergenic |
| CCGGTTCCAATGGGTCGAGC+CGG | 0.554679 | 8.3:+28689115 | None:intergenic |
| GTTCTTGTTAAGTAAAGGAA+CGG | 0.556371 | 8.3:+28689053 | None:intergenic |
| TGTCAAGACGTATTACAAAA+GGG | 0.562945 | 8.3:+28685050 | None:intergenic |
| GTAGAGGTCTCTGAGTAGTA+GGG | 0.566551 | 8.3:+28686243 | None:intergenic |
| AAGGAACGGTTATAGTGGAC+CGG | 0.567519 | 8.3:+28689067 | None:intergenic |
| ATTCCCAATCTTTATCCCAC+CGG | 0.568510 | 8.3:+28685099 | None:intergenic |
| GTTATCACTGTGGACTTGGA+AGG | 0.570869 | 8.3:-28685163 | MS.gene017554:CDS |
| TAGAAGGAAACCCTAATGGT+AGG | 0.571514 | 8.3:-28686300 | MS.gene017554:CDS |
| GGACCGGTTTAGCTTGTCGA+GGG | 0.573379 | 8.3:+28689083 | None:intergenic |
| ATACTGGCTGTGTAGATGGG+TGG | 0.587528 | 8.3:-28688945 | MS.gene017554:CDS |
| GAATGTTATCAGGCATGCCA+GGG | 0.588881 | 8.3:+28685649 | None:intergenic |
| CCCAGTTATTATAGCCTCAG+CGG | 0.590689 | 8.3:-28689145 | MS.gene017554:CDS |
| AACATTCATTATGATGGACA+TGG | 0.593918 | 8.3:-28685633 | MS.gene017554:CDS |
| CCCAAATTATCATTGACCGG+TGG | 0.597494 | 8.3:-28685115 | MS.gene017554:CDS |
| ATTGGGAATCACTTATACTG+TGG | 0.599269 | 8.3:-28685085 | MS.gene017554:CDS |
| CCGCTGAGGCTATAATAACT+GGG | 0.599731 | 8.3:+28689145 | None:intergenic |
| TTCATCTAAATACTCATACA+AGG | 0.609469 | 8.3:-28686341 | MS.gene017554:CDS |
| TGGACCGGTTTAGCTTGTCG+AGG | 0.636901 | 8.3:+28689082 | None:intergenic |
| GAAGATTGGGTTAACACAGG+TGG | 0.640222 | 8.3:-28688889 | MS.gene017554:CDS |
| CAACTCCATTAGGAATGTAG+AGG | 0.642293 | 8.3:+28686227 | None:intergenic |
| GTTGAAGATTGGGTTAACAC+AGG | 0.642716 | 8.3:-28688892 | MS.gene017554:CDS |
| TGGGTGGATTAAGAGAATAA+CGG | 0.643809 | 8.3:-28688929 | MS.gene017554:CDS |
| ACATTCATTATGATGGACAT+GGG | 0.646294 | 8.3:-28685632 | MS.gene017554:CDS |
| CTGAATTTGTCAAAGAACGG+AGG | 0.657045 | 8.3:-28685187 | MS.gene017554:CDS |
| GGGGTTGATGTAGCACATGA+TGG | 0.659959 | 8.3:-28686385 | MS.gene017554:CDS |
| CCATCAAAAGCCAAACCAAG+TGG | 0.660290 | 8.3:+28688862 | None:intergenic |
| GACCGGTTTAGCTTGTCGAG+GGG | 0.662587 | 8.3:+28689084 | None:intergenic |
| GGGAGAATAATAGCTATGAA+CGG | 0.662624 | 8.3:+28689165 | None:intergenic |
| AAAATTCAAAGTAACAGATG+GGG | 0.664566 | 8.3:-28686404 | MS.gene017554:CDS |
| ATACTGGATTGGAATAGCCA+CGG | 0.680040 | 8.3:-28685607 | MS.gene017554:intron |
| AATAACGGCGAATGAATCGG+TGG | 0.688503 | 8.3:-28688914 | MS.gene017554:CDS |
| TGTTATCAGGCATGCCAGGG+AGG | 0.693601 | 8.3:+28685652 | None:intergenic |
| TGCAAGAAATATTACATACG+TGG | 0.720518 | 8.3:-28685708 | MS.gene017554:CDS |
| GAGCCGGTAGAGAACCGCTG+AGG | 0.755692 | 8.3:+28689131 | None:intergenic |
| GAACGGAGGAGTTATCACTG+TGG | 0.783679 | 8.3:-28685173 | MS.gene017554:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATAATCTAAGAAAATTA+TGG | - | chr8.3:28687298-28687317 | MS.gene017554:intron | 10.0% |
| !!! | AATAAATTTATTAACTTTTG+GGG | + | chr8.3:28687410-28687429 | None:intergenic | 10.0% |
| !!! | ACTCTAATTTATATTTTTTT+TGG | + | chr8.3:28686265-28686284 | None:intergenic | 10.0% |
| !!! | GATTTGTTATTTATTTTAAT+AGG | + | chr8.3:28685664-28685683 | None:intergenic | 10.0% |
| !!! | TAAAATATTTTAATGTGTTT+TGG | + | chr8.3:28688391-28688410 | None:intergenic | 10.0% |
| !!! | TTATTTCAAGATTATTTTTA+AGG | + | chr8.3:28686141-28686160 | None:intergenic | 10.0% |
| !! | AAAATAATCTATAAGAACAT+AGG | + | chr8.3:28687635-28687654 | None:intergenic | 15.0% |
| !! | AAATACAAATAAAAAAGGTT+TGG | + | chr8.3:28686750-28686769 | None:intergenic | 15.0% |
| !! | AACACAAATACAAATAAAAA+AGG | + | chr8.3:28686755-28686774 | None:intergenic | 15.0% |
| !! | AATACAAATAAAAAAGGTTT+GGG | + | chr8.3:28686749-28686768 | None:intergenic | 15.0% |
| !! | ACAATTAAAACATGTTATAT+AGG | - | chr8.3:28685927-28685946 | MS.gene017554:intron | 15.0% |
| !! | ACATAATTGAACAAAATTAA+AGG | - | chr8.3:28686658-28686677 | MS.gene017554:intron | 15.0% |
| !! | TAATTTAATGATATGGAATA+GGG | - | chr8.3:28687750-28687769 | MS.gene017554:intron | 15.0% |
| !! | TTAATTTAATGATATGGAAT+AGG | - | chr8.3:28687749-28687768 | MS.gene017554:intron | 15.0% |
| !! | TTATATAAACCAAACTATAT+AGG | + | chr8.3:28688337-28688356 | None:intergenic | 15.0% |
| !!! | AAAAAAATAACTTGTATCTA+TGG | - | chr8.3:28686964-28686983 | MS.gene017554:intron | 15.0% |
| !!! | AAAATTCAGTTGTTTTTTTT+TGG | + | chr8.3:28685588-28685607 | None:intergenic | 15.0% |
| !!! | ACATTTCATTTAATTTATGT+CGG | + | chr8.3:28686550-28686569 | None:intergenic | 15.0% |
| !!! | CTAAATTTTTTCTTTCTTTA+AGG | - | chr8.3:28685492-28685511 | MS.gene017554:intron | 15.0% |
| !!! | TAGATTTTAGAATACAAATA+GGG | - | chr8.3:28688409-28688428 | MS.gene017554:intron | 15.0% |
| !!! | TGGACTTATTTTAATTTTAT+GGG | - | chr8.3:28688487-28688506 | MS.gene017554:intron | 15.0% |
| !!! | TGTTAAAGAATTTTTGTTTA+GGG | - | chr8.3:28687481-28687500 | MS.gene017554:intron | 15.0% |
| !!! | TTAGATTTTAGAATACAAAT+AGG | - | chr8.3:28688408-28688427 | MS.gene017554:intron | 15.0% |
| !!! | TTGGACTTATTTTAATTTTA+TGG | - | chr8.3:28688486-28688505 | MS.gene017554:intron | 15.0% |
| !!! | TTGTTAAAGAATTTTTGTTT+AGG | - | chr8.3:28687480-28687499 | MS.gene017554:intron | 15.0% |
| !! | AATAAATTTCCATCAAACTA+AGG | - | chr8.3:28688221-28688240 | MS.gene017554:intron | 20.0% |
| !! | ATAAATTTCCATCAAACTAA+GGG | - | chr8.3:28688222-28688241 | MS.gene017554:intron | 20.0% |
| !! | ATATGAATTTCCAAAACATA+TGG | + | chr8.3:28688912-28688931 | None:intergenic | 20.0% |
| !! | ATTGTCAATTATACATTAAC+AGG | - | chr8.3:28687047-28687066 | MS.gene017554:intron | 20.0% |
| !! | ATTTATGTGACAATTCTAAA+TGG | + | chr8.3:28685771-28685790 | None:intergenic | 20.0% |
| !! | TAAAATTCAAAGTAACAGAT+GGG | - | chr8.3:28687832-28687851 | MS.gene017554:intron | 20.0% |
| !! | TAAAATTGTCAAGAATACAA+CGG | - | chr8.3:28687185-28687204 | MS.gene017554:intron | 20.0% |
| !! | TTTCATGATTTAAACAAAGA+TGG | + | chr8.3:28686112-28686131 | None:intergenic | 20.0% |
| !!! | ACATGTTTTGATATAAATGT+TGG | - | chr8.3:28685435-28685454 | MS.gene017554:intron | 20.0% |
| !!! | ATATTTTTTTTGGTACAACT+GGG | + | chr8.3:28686255-28686274 | None:intergenic | 20.0% |
| !!! | ATGTGTTTTGGAAATTTTTA+TGG | + | chr8.3:28688379-28688398 | None:intergenic | 20.0% |
| !!! | GATGTATTTTATGAGTTTAA+TGG | + | chr8.3:28685896-28685915 | None:intergenic | 20.0% |
| !!! | GTCAATTGTTTCTTATAATA+AGG | - | chr8.3:28686424-28686443 | MS.gene017554:CDS | 20.0% |
| !!! | GTTAAAGAATTTTTGTTTAG+GGG | - | chr8.3:28687482-28687501 | MS.gene017554:intron | 20.0% |
| !!! | TAAGAAACAATTGACATTTT+AGG | + | chr8.3:28686419-28686438 | None:intergenic | 20.0% |
| !!! | TAAGAAACAATTGACTTTTT+AGG | - | chr8.3:28686330-28686349 | MS.gene017554:CDS | 20.0% |
| !!! | TATATTTTTTTTGGTACAAC+TGG | + | chr8.3:28686256-28686275 | None:intergenic | 20.0% |
| !!! | TATTACAAAAGGGTATAAAA+TGG | + | chr8.3:28689180-28689199 | None:intergenic | 20.0% |
| !!! | TGTAACATTGCATATTTTTT+AGG | - | chr8.3:28687255-28687274 | MS.gene017554:intron | 20.0% |
| !!! | TTCAATTTAGGTTTTTTTGA+AGG | - | chr8.3:28688847-28688866 | MS.gene017554:CDS | 20.0% |
| !!! | TTGTTTCTTATAATAAAGAC+CGG | + | chr8.3:28686320-28686339 | None:intergenic | 20.0% |
| !!! | TTTCTTTCTTTAAGGAAAAA+AGG | - | chr8.3:28685500-28685519 | MS.gene017554:intron | 20.0% |
| !!! | TTTTTTTTGGTCAATTCAAT+GGG | + | chr8.3:28685575-28685594 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTGGTCAATTCAA+TGG | + | chr8.3:28685576-28685595 | None:intergenic | 20.0% |
| ! | AAAATTCAAAGTAACAGATG+GGG | - | chr8.3:28687833-28687852 | MS.gene017554:intron | 25.0% |
| ! | AAAGTTGTTTGATACCATTA+AGG | + | chr8.3:28685729-28685748 | None:intergenic | 25.0% |
| ! | AAATCTATTTCAATGCATCA+TGG | - | chr8.3:28685679-28685698 | MS.gene017554:CDS | 25.0% |
| ! | AAGAAAAACTAAAACAATCC+TGG | + | chr8.3:28685543-28685562 | None:intergenic | 25.0% |
| ! | AATCTGAATTTGTCAAAGAA+CGG | - | chr8.3:28689047-28689066 | MS.gene017554:CDS | 25.0% |
| ! | ACACGATAACAAAATTTGAT+TGG | + | chr8.3:28686478-28686497 | None:intergenic | 25.0% |
| ! | AGAAAAACTAAAACAATCCT+GGG | + | chr8.3:28685542-28685561 | None:intergenic | 25.0% |
| ! | CCAACTAAAACATGTTATAT+AGG | - | chr8.3:28686068-28686087 | MS.gene017554:intron | 25.0% |
| ! | CTAAAATTCAAAGTAACAGA+TGG | - | chr8.3:28687831-28687850 | MS.gene017554:intron | 25.0% |
| ! | TAAATTTCCATCAAACTAAG+GGG | - | chr8.3:28688223-28688242 | MS.gene017554:intron | 25.0% |
| ! | TAATTTATGTCGGAAAATGT+AGG | + | chr8.3:28686540-28686559 | None:intergenic | 25.0% |
| ! | TACTTGTACTAATACTAAGA+AGG | + | chr8.3:28688097-28688116 | None:intergenic | 25.0% |
| ! | TCTCTAAACAAGGAAAATAA+AGG | - | chr8.3:28688880-28688899 | MS.gene017554:CDS | 25.0% |
| ! | TGATGGTACTATTTATTTCA+CGG | - | chr8.3:28687869-28687888 | MS.gene017554:intron | 25.0% |
| ! | TTCATCTAAATACTCATACA+AGG | - | chr8.3:28687896-28687915 | MS.gene017554:intron | 25.0% |
| ! | TTTATGAGTTTAATGGTGAT+GGG | + | chr8.3:28685889-28685908 | None:intergenic | 25.0% |
| !! | AAGAATGTGTCATTCAATTT+AGG | - | chr8.3:28688835-28688854 | MS.gene017554:CDS | 25.0% |
| !! | ATTGAATGACACATTCTTTT+TGG | + | chr8.3:28688833-28688852 | None:intergenic | 25.0% |
| !! | CAATTCTAGACTTTTACATA+CGG | + | chr8.3:28687018-28687037 | None:intergenic | 25.0% |
| !! | TCTTTAAGGAAAAAAGGTTA+AGG | - | chr8.3:28685506-28685525 | MS.gene017554:intron | 25.0% |
| !! | TTTTATGAGTTTAATGGTGA+TGG | + | chr8.3:28685890-28685909 | None:intergenic | 25.0% |
| !! | TTTTCAAATACCCTTTCATT+AGG | - | chr8.3:28688991-28689010 | MS.gene017554:CDS | 25.0% |
| !!! | ATTTTAATAGGTTCGTTTGA+GGG | + | chr8.3:28685652-28685671 | None:intergenic | 25.0% |
| !!! | ATTTTGACTAATCATACATG+AGG | + | chr8.3:28687589-28687608 | None:intergenic | 25.0% |
| !!! | CATCTGTTACTTTGAATTTT+AGG | + | chr8.3:28687833-28687852 | None:intergenic | 25.0% |
| !!! | CCTATATAACATGTTTTAGT+TGG | + | chr8.3:28686071-28686090 | None:intergenic | 25.0% |
| !!! | GAATATGTTTTTTCTGCAAA+TGG | - | chr8.3:28685462-28685481 | MS.gene017554:intron | 25.0% |
| !!! | TATTTTAATAGGTTCGTTTG+AGG | + | chr8.3:28685653-28685672 | None:intergenic | 25.0% |
| !!! | TGTTGTTGTTTGTGTATTTA+TGG | - | chr8.3:28688940-28688959 | MS.gene017554:CDS | 25.0% |
| !!! | TTTATTAACTTTTGGGGATA+TGG | + | chr8.3:28687404-28687423 | None:intergenic | 25.0% |
| AACTCAAAAACCTACCATTA+GGG | + | chr8.3:28687950-28687969 | None:intergenic | 30.0% | |
| ACAAGTTACATTATCATGCA+TGG | - | chr8.3:28687688-28687707 | MS.gene017554:intron | 30.0% | |
| ACAGATTCACACACATAAAA+GGG | - | chr8.3:28688786-28688805 | MS.gene017554:intron | 30.0% | |
| AGCATGTAATTCTTCCAAAT+AGG | - | chr8.3:28687551-28687570 | MS.gene017554:intron | 30.0% | |
| ATATTAGAAGGAAACCCTAA+TGG | - | chr8.3:28687933-28687952 | MS.gene017554:intron | 30.0% | |
| ATGTCAAGACGTATTACAAA+AGG | + | chr8.3:28689191-28689210 | None:intergenic | 30.0% | |
| CCAACAACATTTAGAAATGT+AGG | + | chr8.3:28688470-28688489 | None:intergenic | 30.0% | |
| CCATAAATAGTCTCTAAACA+AGG | - | chr8.3:28688870-28688889 | MS.gene017554:CDS | 30.0% | |
| CCATCATAATGAATGTTATC+AGG | + | chr8.3:28688601-28688620 | None:intergenic | 30.0% | |
| CCTACATTTCTAAATGTTGT+TGG | - | chr8.3:28688467-28688486 | MS.gene017554:intron | 30.0% | |
| CCTGATAACATTCATTATGA+TGG | - | chr8.3:28688598-28688617 | MS.gene017554:intron | 30.0% | |
| CTTGAGATCAACTATAAGTA+GGG | + | chr8.3:28687234-28687253 | None:intergenic | 30.0% | |
| GGTTTCCTTCTAATATTTCT+AGG | + | chr8.3:28687929-28687948 | None:intergenic | 30.0% | |
| GTCAATTATACATTAACAGG+AGG | - | chr8.3:28687050-28687069 | MS.gene017554:intron | 30.0% | |
| GTGCAAGAAAATCATAAGAT+GGG | - | chr8.3:28688433-28688452 | MS.gene017554:intron | 30.0% | |
| GTTCTTGTTAAGTAAAGGAA+CGG | + | chr8.3:28685187-28685206 | None:intergenic | 30.0% | |
| TAACTCAAAAACCTACCATT+AGG | + | chr8.3:28687951-28687970 | None:intergenic | 30.0% | |
| TACAGATTCACACACATAAA+AGG | - | chr8.3:28688785-28688804 | MS.gene017554:intron | 30.0% | |
| TCTGGCAATCATCATAAAAA+AGG | - | chr8.3:28689019-28689038 | MS.gene017554:CDS | 30.0% | |
| TCTGTCCTAGAAATATTAGA+AGG | - | chr8.3:28687921-28687940 | MS.gene017554:intron | 30.0% | |
| TCTTGAGATCAACTATAAGT+AGG | + | chr8.3:28687235-28687254 | None:intergenic | 30.0% | |
| TGCAAGAAATATTACATACG+TGG | - | chr8.3:28688529-28688548 | MS.gene017554:intron | 30.0% | |
| TGTCAAGACGTATTACAAAA+GGG | + | chr8.3:28689190-28689209 | None:intergenic | 30.0% | |
| TTCTTATAATAAAGACCGGA+GGG | + | chr8.3:28686316-28686335 | None:intergenic | 30.0% | |
| TTCTTATAATAAGGACGAGA+TGG | - | chr8.3:28686433-28686452 | MS.gene017554:CDS | 30.0% | |
| TTGAAAATTATGTCCAGTTC+AGG | + | chr8.3:28688978-28688997 | None:intergenic | 30.0% | |
| TTTCTTATAATAAAGACCGG+AGG | + | chr8.3:28686317-28686336 | None:intergenic | 30.0% | |
| ! | ATTGACTTCAAATTATACCG+TGG | + | chr8.3:28688650-28688669 | None:intergenic | 30.0% |
| ! | CCTTGTTTAGAGACTATTTA+TGG | + | chr8.3:28688873-28688892 | None:intergenic | 30.0% |
| ! | GGTATTTTGTAGTTCCTATT+TGG | + | chr8.3:28687568-28687587 | None:intergenic | 30.0% |
| ! | GGTGTGCTTTATTGAAATTT+GGG | - | chr8.3:28688244-28688263 | MS.gene017554:intron | 30.0% |
| ! | TATGGAGTGTTTATGCTATT+CGG | + | chr8.3:28688361-28688380 | None:intergenic | 30.0% |
| ! | TTAGAAGTATGCAAGTAACA+AGG | + | chr8.3:28688276-28688295 | None:intergenic | 30.0% |
| ! | TTTTAATAGGTTCGTTTGAG+GGG | + | chr8.3:28685651-28685670 | None:intergenic | 30.0% |
| !! | AACACAAGAAAAAGGTGTTT+AGG | - | chr8.3:28686626-28686645 | MS.gene017554:intron | 30.0% |
| !! | AACATTCATTATGATGGACA+TGG | - | chr8.3:28688604-28688623 | MS.gene017554:intron | 30.0% |
| !! | AAGACCACAAAATTTTGATC+TGG | + | chr8.3:28688044-28688063 | None:intergenic | 30.0% |
| !! | AAGGTGTTAACCATATGTTT+TGG | - | chr8.3:28688899-28688918 | MS.gene017554:CDS | 30.0% |
| !! | ACATTCATTATGATGGACAT+GGG | - | chr8.3:28688605-28688624 | MS.gene017554:intron | 30.0% |
| !! | ACTTAAAGGGCATCAAAATT+TGG | - | chr8.3:28686933-28686952 | MS.gene017554:intron | 30.0% |
| !!! | TTCAAGACTTTGTTTTTCGA+AGG | + | chr8.3:28686000-28686019 | None:intergenic | 30.0% |
| AAACAACTTTGCACACACAA+CGG | - | chr8.3:28685739-28685758 | MS.gene017554:intron | 35.0% | |
| AAGGTGATGAACAACTTACA+TGG | + | chr8.3:28688078-28688097 | None:intergenic | 35.0% | |
| AAGTAAAGGAACGGTTATAG+TGG | + | chr8.3:28685178-28685197 | None:intergenic | 35.0% | |
| ACTTGTCACAATTTAGTCCA+AGG | + | chr8.3:28687674-28687693 | None:intergenic | 35.0% | |
| AGATTAGATGAGTGAATGAG+TGG | + | chr8.3:28687722-28687741 | None:intergenic | 35.0% | |
| ATTGGGAATCACTTATACTG+TGG | - | chr8.3:28689152-28689171 | MS.gene017554:CDS | 35.0% | |
| CGCATGTTCTTGTTAAGTAA+AGG | + | chr8.3:28685192-28685211 | None:intergenic | 35.0% | |
| CGTGCAAGAAAATCATAAGA+TGG | - | chr8.3:28688432-28688451 | MS.gene017554:intron | 35.0% | |
| CTTAACAAGAACATGCGATT+AGG | - | chr8.3:28685195-28685214 | MS.gene017554:CDS | 35.0% | |
| GATCCCAAATTATCATTGAC+CGG | - | chr8.3:28689119-28689138 | MS.gene017554:CDS | 35.0% | |
| GATTAGATGAGTGAATGAGT+GGG | + | chr8.3:28687721-28687740 | None:intergenic | 35.0% | |
| GGGAGAATAATAGCTATGAA+CGG | + | chr8.3:28685075-28685094 | None:intergenic | 35.0% | |
| TCTTTCTCGTGTTAAATCCT+TGG | - | chr8.3:28687654-28687673 | MS.gene017554:intron | 35.0% | |
| TGGTCACAAACACAAGAAAA+AGG | - | chr8.3:28686618-28686637 | MS.gene017554:intron | 35.0% | |
| TTGATGTTTGTCACTCTAAG+TGG | - | chr8.3:28687139-28687158 | MS.gene017554:intron | 35.0% | |
| ! | ACCAAGAAAGAATTTTTCCG+TGG | + | chr8.3:28686602-28686621 | None:intergenic | 35.0% |
| ! | AGAATTTTTCCGTGGGAAAA+TGG | + | chr8.3:28686594-28686613 | None:intergenic | 35.0% |
| ! | CCAAGAAAGAATTTTTCCGT+GGG | + | chr8.3:28686601-28686620 | None:intergenic | 35.0% |
| ! | CTCACCAGATCAAAATTTTG+TGG | - | chr8.3:28688037-28688056 | MS.gene017554:intron | 35.0% |
| ! | GAATTTTTCCGTGGGAAAAT+GGG | + | chr8.3:28686593-28686612 | None:intergenic | 35.0% |
| ! | GGGTGTGCTTTATTGAAATT+TGG | - | chr8.3:28688243-28688262 | MS.gene017554:intron | 35.0% |
| ! | TTTATACTGGCTGTGTAGAT+GGG | - | chr8.3:28685289-28685308 | MS.gene017554:intron | 35.0% |
| ! | TTTGATGCCCTTTAAGTTTG+AGG | + | chr8.3:28686930-28686949 | None:intergenic | 35.0% |
| !! | ATTTTATGGGCTAATGTTGC+AGG | - | chr8.3:28688500-28688519 | MS.gene017554:intron | 35.0% |
| !! | TGGGTGGATTAAGAGAATAA+CGG | - | chr8.3:28685308-28685327 | MS.gene017554:intron | 35.0% |
| !!! | GGTACCATTTTTTGAAGGAA+GGG | + | chr8.3:28687326-28687345 | None:intergenic | 35.0% |
| AACAACTTTGCACACACAAC+GGG | - | chr8.3:28685740-28685759 | MS.gene017554:intron | 40.0% | |
| ACACATGGCCTCAAACTTAA+AGG | - | chr8.3:28686919-28686938 | MS.gene017554:intron | 40.0% | |
| ACCGGAGGGAGTAATTTATA+CGG | + | chr8.3:28686302-28686321 | None:intergenic | 40.0% | |
| ACCGTATAAATTACTCCCTC+CGG | - | chr8.3:28686298-28686317 | MS.gene017554:CDS | 40.0% | |
| AGAGACCTCTACATTCCTAA+TGG | - | chr8.3:28688005-28688024 | MS.gene017554:intron | 40.0% | |
| AGCCTCCTAATTGTTCGAAA+CGG | - | chr8.3:28687208-28687227 | MS.gene017554:intron | 40.0% | |
| AGGATCTGAAAAAGTTGCAG+AGG | - | chr8.3:28685215-28685234 | MS.gene017554:CDS | 40.0% | |
| AGTTCTTGGACCTGAAGATT+TGG | - | chr8.3:28685242-28685261 | MS.gene017554:CDS | 40.0% | |
| ATGAATCGGTGGTTGAAGAT+TGG | - | chr8.3:28685334-28685353 | MS.gene017554:intron | 40.0% | |
| ATTCCCAATCTTTATCCCAC+CGG | + | chr8.3:28689141-28689160 | None:intergenic | 40.0% | |
| CAACTCCATTAGGAATGTAG+AGG | + | chr8.3:28688013-28688032 | None:intergenic | 40.0% | |
| CACATGGCCTCAAACTTAAA+GGG | - | chr8.3:28686920-28686939 | MS.gene017554:intron | 40.0% | |
| CCAAATTATCATTGACCGGT+GGG | - | chr8.3:28689123-28689142 | MS.gene017554:CDS | 40.0% | |
| CCACCGGTCAATGATAATTT+GGG | + | chr8.3:28689125-28689144 | None:intergenic | 40.0% | |
| CCCACGGAAAAATTCTTTCT+TGG | - | chr8.3:28686598-28686617 | MS.gene017554:intron | 40.0% | |
| CTGAATTTGTCAAAGAACGG+AGG | - | chr8.3:28689050-28689069 | MS.gene017554:CDS | 40.0% | |
| GAGAATAACGGCGAATGAAT+CGG | - | chr8.3:28685320-28685339 | MS.gene017554:intron | 40.0% | |
| GCATCGTATACCAAATCTTC+AGG | + | chr8.3:28685255-28685274 | None:intergenic | 40.0% | |
| GGATCATAGTAGTGTGTAGT+AGG | + | chr8.3:28689104-28689123 | None:intergenic | 40.0% | |
| GGATCTGAAAAAGTTGCAGA+GGG | - | chr8.3:28685216-28685235 | MS.gene017554:CDS | 40.0% | |
| GGTAAGTGTCTATTTGTCTG+TGG | - | chr8.3:28687071-28687090 | MS.gene017554:intron | 40.0% | |
| GTTAAGGAAATTACTGTCCC+AGG | - | chr8.3:28685522-28685541 | MS.gene017554:intron | 40.0% | |
| GTTGAAGATTGGGTTAACAC+AGG | - | chr8.3:28685345-28685364 | MS.gene017554:intron | 40.0% | |
| GTTTAATGACGCTGCCTTAA+TGG | - | chr8.3:28685712-28685731 | MS.gene017554:CDS | 40.0% | |
| TACATACGTGGCACGAAAAA+AGG | - | chr8.3:28688541-28688560 | MS.gene017554:intron | 40.0% | |
| TAGAAGGAAACCCTAATGGT+AGG | - | chr8.3:28687937-28687956 | MS.gene017554:intron | 40.0% | |
| TATGTCCAGTTCAGGAGAAA+AGG | + | chr8.3:28688970-28688989 | None:intergenic | 40.0% | |
| TATTGTTGCAGACGCAGATA+AGG | - | chr8.3:28685410-28685429 | MS.gene017554:intron | 40.0% | |
| TGAATCGGTGGTTGAAGATT+GGG | - | chr8.3:28685335-28685354 | MS.gene017554:intron | 40.0% | |
| ! | ATACTGGATTGGAATAGCCA+CGG | - | chr8.3:28688630-28688649 | MS.gene017554:intron | 40.0% |
| ! | GAAAATGAACCGGTTCCAAT+GGG | + | chr8.3:28685134-28685153 | None:intergenic | 40.0% |
| ! | GCTTTGGGTGTAGTTTATAC+TGG | - | chr8.3:28685276-28685295 | MS.gene017554:intron | 40.0% |
| ! | GTTTATACTGGCTGTGTAGA+TGG | - | chr8.3:28685288-28685307 | MS.gene017554:intron | 40.0% |
| ! | TTTGGTATACGATGCTGCTT+TGG | - | chr8.3:28685260-28685279 | MS.gene017554:CDS | 40.0% |
| !! | CAGAGTTTTGTGACTCATTG+TGG | - | chr8.3:28688716-28688735 | MS.gene017554:intron | 40.0% |
| !! | TTGGTATACGATGCTGCTTT+GGG | - | chr8.3:28685261-28685280 | MS.gene017554:CDS | 40.0% |
| !!! | AGGGTTGTCTTTTTTGTTGC+TGG | + | chr8.3:28687978-28687997 | None:intergenic | 40.0% |
| !!! | CTCAGGGTACCATTTTTTGA+AGG | + | chr8.3:28687331-28687350 | None:intergenic | 40.0% |
| !!! | GGGTACCATTTTTTGAAGGA+AGG | + | chr8.3:28687327-28687346 | None:intergenic | 40.0% |
| !!! | GGTTTGGCTTTTGATGGAAA+TGG | - | chr8.3:28685381-28685400 | MS.gene017554:intron | 40.0% |
| AATAACGGCGAATGAATCGG+TGG | - | chr8.3:28685323-28685342 | MS.gene017554:intron | 45.0% | |
| ACCGCTGAGGCTATAATAAC+TGG | + | chr8.3:28685096-28685115 | None:intergenic | 45.0% | |
| AGGAGTTATCACTGTGGACT+TGG | - | chr8.3:28689070-28689089 | MS.gene017554:CDS | 45.0% | |
| CCATCAAAAGCCAAACCAAG+TGG | + | chr8.3:28685378-28685397 | None:intergenic | 45.0% | |
| CCCAAATTATCATTGACCGG+TGG | - | chr8.3:28689122-28689141 | MS.gene017554:CDS | 45.0% | |
| CCCACCGGTCAATGATAATT+TGG | + | chr8.3:28689126-28689145 | None:intergenic | 45.0% | |
| CCCAGTTATTATAGCCTCAG+CGG | - | chr8.3:28685092-28685111 | MS.gene017554:CDS | 45.0% | |
| CCGCTGAGGCTATAATAACT+GGG | + | chr8.3:28685095-28685114 | None:intergenic | 45.0% | |
| CTCGCACGTCCTATATAGTT+TGG | - | chr8.3:28688325-28688344 | MS.gene017554:intron | 45.0% | |
| GAAGATTGGGTTAACACAGG+TGG | - | chr8.3:28685348-28685367 | MS.gene017554:intron | 45.0% | |
| GAATGTTATCAGGCATGCCA+GGG | + | chr8.3:28688591-28688610 | None:intergenic | 45.0% | |
| GAGATCCACATAGAGAACGT+GGG | + | chr8.3:28686797-28686816 | None:intergenic | 45.0% | |
| GGTGCCCTTCCTTCAAAAAA+TGG | - | chr8.3:28687319-28687338 | MS.gene017554:intron | 45.0% | |
| GTACTTGCGACTGAGATTGA+TGG | - | chr8.3:28687807-28687826 | MS.gene017554:intron | 45.0% | |
| GTAGAGGTCTCTGAGTAGTA+GGG | + | chr8.3:28687997-28688016 | None:intergenic | 45.0% | |
| GTTATCACTGTGGACTTGGA+AGG | - | chr8.3:28689074-28689093 | MS.gene017554:CDS | 45.0% | |
| TAGGGCCGTTTCGAACAATT+AGG | + | chr8.3:28687216-28687235 | None:intergenic | 45.0% | |
| TGAATGTTATCAGGCATGCC+AGG | + | chr8.3:28688592-28688611 | None:intergenic | 45.0% | |
| TGACCGGTGGGATAAAGATT+GGG | - | chr8.3:28689135-28689154 | MS.gene017554:CDS | 45.0% | |
| TGAGATCCACATAGAGAACG+TGG | + | chr8.3:28686798-28686817 | None:intergenic | 45.0% | |
| TGTAGAGGTCTCTGAGTAGT+AGG | + | chr8.3:28687998-28688017 | None:intergenic | 45.0% | |
| TTGACCGGTGGGATAAAGAT+TGG | - | chr8.3:28689134-28689153 | MS.gene017554:CDS | 45.0% | |
| TTGTCGAGGGGAAAATGAAC+CGG | + | chr8.3:28685144-28685163 | None:intergenic | 45.0% | |
| ! | AAGCACACCCCTTAGTTTGA+TGG | + | chr8.3:28688233-28688252 | None:intergenic | 45.0% |
| ! | AAGTTTGAGGCCATGTGTCA+AGG | + | chr8.3:28686917-28686936 | None:intergenic | 45.0% |
| ! | AGTTTGAGGCCATGTGTCAA+GGG | + | chr8.3:28686916-28686935 | None:intergenic | 45.0% |
| ! | CATATCGTCCCATTTTCCCA+CGG | - | chr8.3:28686582-28686601 | MS.gene017554:intron | 45.0% |
| ! | GGAAAATGAACCGGTTCCAA+TGG | + | chr8.3:28685135-28685154 | None:intergenic | 45.0% |
| !! | AAGGAACGGTTATAGTGGAC+CGG | + | chr8.3:28685173-28685192 | None:intergenic | 45.0% |
| !! | AATAACTAGCTTTGCAGCCC+CGG | - | chr8.3:28686843-28686862 | MS.gene017554:intron | 45.0% |
| !! | ATGATGGACATGGGCAATAC+TGG | - | chr8.3:28688614-28688633 | MS.gene017554:intron | 45.0% |
| !! | GAAAAGTTTTGTGACCTCCC+TGG | - | chr8.3:28688571-28688590 | MS.gene017554:intron | 45.0% |
| !!! | CCACTTGGTTTGGCTTTTGA+TGG | - | chr8.3:28685375-28685394 | MS.gene017554:intron | 45.0% |
| !!! | ATTAATTTAATTTAATGATA+TGG | - | chr8.3:28687743-28687762 | MS.gene017554:intron | 5.0% |
| !!! | TAATAAATTTATTAACTTTT+GGG | + | chr8.3:28687411-28687430 | None:intergenic | 5.0% |
| !!! | TTAATAAATTTATTAACTTT+TGG | + | chr8.3:28687412-28687431 | None:intergenic | 5.0% |
| AACACAGGTGGAAGACCACT+TGG | - | chr8.3:28685360-28685379 | MS.gene017554:intron | 50.0% | |
| ACATAGAGAACGTGGGAAGG+AGG | + | chr8.3:28686790-28686809 | None:intergenic | 50.0% | |
| AGGTGGAAGACCACTTGGTT+TGG | - | chr8.3:28685365-28685384 | MS.gene017554:intron | 50.0% | |
| CGTGGGAAAATGGGACGATA+TGG | + | chr8.3:28686584-28686603 | None:intergenic | 50.0% | |
| GAACGGAGGAGTTATCACTG+TGG | - | chr8.3:28689064-28689083 | MS.gene017554:CDS | 50.0% | |
| GCACCCATGACTTCTAGTCA+GGG | - | chr8.3:28686865-28686884 | MS.gene017554:intron | 50.0% | |
| GCATCAAGACCCTTGACACA+TGG | - | chr8.3:28686904-28686923 | MS.gene017554:intron | 50.0% | |
| GGACATGGGCAATACTGGAT+TGG | - | chr8.3:28688619-28688638 | MS.gene017554:intron | 50.0% | |
| GGCCGTTTCGAACAATTAGG+AGG | + | chr8.3:28687213-28687232 | None:intergenic | 50.0% | |
| GGTCTTGATGCTCTTGCACA+GGG | + | chr8.3:28686895-28686914 | None:intergenic | 50.0% | |
| GGTGAGACTGCAACTCCATT+AGG | + | chr8.3:28688023-28688042 | None:intergenic | 50.0% | |
| GTTGCAGAGGGACAAGTTCT+TGG | - | chr8.3:28685228-28685247 | MS.gene017554:CDS | 50.0% | |
| TCCACATAGAGAACGTGGGA+AGG | + | chr8.3:28686793-28686812 | None:intergenic | 50.0% | |
| TCCTTCCCACGTTCTCTATG+TGG | - | chr8.3:28686789-28686808 | MS.gene017554:intron | 50.0% | |
| TGACTAGAAGTCATGGGTGC+CGG | + | chr8.3:28686865-28686884 | None:intergenic | 50.0% | |
| TTCCCCTCGACAAGCTAAAC+CGG | - | chr8.3:28685151-28685170 | MS.gene017554:CDS | 50.0% | |
| TTGATGCTCTTGCACAGGGT+CGG | + | chr8.3:28686891-28686910 | None:intergenic | 50.0% | |
| ! | ATACTGGCTGTGTAGATGGG+TGG | - | chr8.3:28685292-28685311 | MS.gene017554:intron | 50.0% |
| ! | GCAGACCTTTTCTCCTGAAC+TGG | - | chr8.3:28688962-28688981 | MS.gene017554:CDS | 50.0% |
| !! | GGGGTTGATGTAGCACATGA+TGG | - | chr8.3:28687852-28687871 | MS.gene017554:intron | 50.0% |
| CGGCCCTGACTAGAAGTCAT+GGG | + | chr8.3:28686871-28686890 | None:intergenic | 55.0% | |
| GACTAGAAGTCATGGGTGCC+GGG | + | chr8.3:28686864-28686883 | None:intergenic | 55.0% | |
| GCCACTCTTGGACAGAAGAC+AGG | - | chr8.3:28687378-28687397 | MS.gene017554:intron | 55.0% | |
| GCCTGTCTTCTGTCCAAGAG+TGG | + | chr8.3:28687382-28687401 | None:intergenic | 55.0% | |
| GGCACCCATGACTTCTAGTC+AGG | - | chr8.3:28686864-28686883 | MS.gene017554:intron | 55.0% | |
| GGGTCTTGATGCTCTTGCAC+AGG | + | chr8.3:28686896-28686915 | None:intergenic | 55.0% | |
| TAGCCTCAGCGGTTCTCTAC+CGG | - | chr8.3:28685103-28685122 | MS.gene017554:CDS | 55.0% | |
| TCGGCCCTGACTAGAAGTCA+TGG | + | chr8.3:28686872-28686891 | None:intergenic | 55.0% | |
| TGTTATCAGGCATGCCAGGG+AGG | + | chr8.3:28688588-28688607 | None:intergenic | 55.0% | |
| ! | ACTAGAAGTCATGGGTGCCG+GGG | + | chr8.3:28686863-28686882 | None:intergenic | 55.0% |
| !! | GACCGGTTTAGCTTGTCGAG+GGG | + | chr8.3:28685156-28685175 | None:intergenic | 55.0% |
| !! | GGACCGGTTTAGCTTGTCGA+GGG | + | chr8.3:28685157-28685176 | None:intergenic | 55.0% |
| !! | TGGACCGGTTTAGCTTGTCG+AGG | + | chr8.3:28685158-28685177 | None:intergenic | 55.0% |
| ACGGAAAGGGGGACAGCTCA+GGG | + | chr8.3:28687347-28687366 | None:intergenic | 60.0% | |
| CCCCTTTCCGTCCACCATCA+GGG | - | chr8.3:28687356-28687375 | MS.gene017554:intron | 60.0% | |
| CTGTCCAAGAGTGGCCCTGA+TGG | + | chr8.3:28687373-28687392 | None:intergenic | 60.0% | |
| TCCAAGAGTGGCCCTGATGG+TGG | + | chr8.3:28687370-28687389 | None:intergenic | 60.0% | |
| TCCACCATCAGGGCCACTCT+TGG | - | chr8.3:28687366-28687385 | MS.gene017554:intron | 60.0% | |
| !! | AGAGTGGCCCTGATGGTGGA+CGG | + | chr8.3:28687366-28687385 | None:intergenic | 60.0% |
| !! | CCCTGATGGTGGACGGAAAG+GGG | + | chr8.3:28687359-28687378 | None:intergenic | 60.0% |
| !! | CCTGATGGTGGACGGAAAGG+GGG | + | chr8.3:28687358-28687377 | None:intergenic | 60.0% |
| !! | GCCCTGATGGTGGACGGAAA+GGG | + | chr8.3:28687360-28687379 | None:intergenic | 60.0% |
| !! | TCTCTACCGGCTCGACCCAT+TGG | - | chr8.3:28685116-28685135 | MS.gene017554:CDS | 60.0% |
| CCCCCTTTCCGTCCACCATC+AGG | - | chr8.3:28687355-28687374 | MS.gene017554:intron | 65.0% | |
| CCGGTTCCAATGGGTCGAGC+CGG | + | chr8.3:28685125-28685144 | None:intergenic | 65.0% | |
| GACGGAAAGGGGGACAGCTC+AGG | + | chr8.3:28687348-28687367 | None:intergenic | 65.0% | |
| GAGCCGGTAGAGAACCGCTG+AGG | + | chr8.3:28685109-28685128 | None:intergenic | 65.0% | |
| ! | CCGGCTCGACCCATTGGAAC+CGG | - | chr8.3:28685122-28685141 | MS.gene017554:CDS | 65.0% |
| !! | GGCCCTGATGGTGGACGGAA+AGG | + | chr8.3:28687361-28687380 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 28685018 | 28689241 | 28685018 | ID=MS.gene017554 |
| chr8.3 | mRNA | 28685018 | 28689241 | 28685018 | ID=MS.gene017554.t1;Parent=MS.gene017554 |
| chr8.3 | exon | 28688828 | 28689241 | 28688828 | ID=MS.gene017554.t1.exon1;Parent=MS.gene017554.t1 |
| chr8.3 | CDS | 28688828 | 28689241 | 28688828 | ID=cds.MS.gene017554.t1;Parent=MS.gene017554.t1 |
| chr8.3 | exon | 28686181 | 28686488 | 28686181 | ID=MS.gene017554.t1.exon2;Parent=MS.gene017554.t1 |
| chr8.3 | CDS | 28686181 | 28686488 | 28686181 | ID=cds.MS.gene017554.t1;Parent=MS.gene017554.t1 |
| chr8.3 | exon | 28685608 | 28685737 | 28685608 | ID=MS.gene017554.t1.exon3;Parent=MS.gene017554.t1 |
| chr8.3 | CDS | 28685608 | 28685737 | 28685608 | ID=cds.MS.gene017554.t1;Parent=MS.gene017554.t1 |
| chr8.3 | exon | 28685018 | 28685293 | 28685018 | ID=MS.gene017554.t1.exon4;Parent=MS.gene017554.t1 |
| chr8.3 | CDS | 28685018 | 28685293 | 28685018 | ID=cds.MS.gene017554.t1;Parent=MS.gene017554.t1 |
| Gene Sequence |
| Protein sequence |
