Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037810.t1 | XP_003629186.1 | 92.5 | 360 | 27 | 0 | 18 | 377 | 16 | 375 | 4.30E-194 | 687.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037810.t1 | Q9CAZ7 | 49.4 | 360 | 170 | 7 | 22 | 373 | 11 | 366 | 1.2e-96 | 354.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037810.t1 | G7LA71 | 92.5 | 360 | 27 | 0 | 18 | 377 | 16 | 375 | 3.1e-194 | 687.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene037810 | MS.gene017555 | PPI |
MS.gene27212 | MS.gene037810 | PPI |
MS.gene037810 | MS.gene059296 | PPI |
MS.gene23776 | MS.gene037810 | PPI |
MS.gene037810 | MS.gene27210 | PPI |
MS.gene037810 | MS.gene23779 | PPI |
MS.gene037810 | MS.gene85273 | PPI |
MS.gene037810 | MS.gene61630 | PPI |
MS.gene037809 | MS.gene037810 | PPI |
MS.gene037810 | MS.gene037812 | PPI |
MS.gene037810 | MS.gene017558 | PPI |
MS.gene037810 | MS.gene032181 | PPI |
MS.gene037810 | MS.gene052008 | PPI |
MS.gene037810 | MS.gene27212 | PPI |
MS.gene037810 | MS.gene017556 | PPI |
MS.gene037810 | MS.gene017554 | PPI |
MS.gene037810 | MS.gene037809 | PPI |
MS.gene037810 | MS.gene98728 | PPI |
MS.gene037810 | MS.gene66625 | PPI |
MS.gene037810 | MS.gene23780 | PPI |
MS.gene037810 | MS.gene35719 | PPI |
MS.gene037810 | MS.gene061292 | PPI |
MS.gene037810 | MS.gene23775 | PPI |
MS.gene037810 | MS.gene034366 | PPI |
MS.gene037810 | MS.gene27211 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037810.t1 | MTR_8g074270 | 92.042 | 377 | 28 | 1 | 1 | 377 | 1 | 375 | 0.0 | 713 |
MS.gene037810.t1 | MTR_8g074170 | 89.125 | 377 | 39 | 1 | 1 | 377 | 1 | 375 | 0.0 | 690 |
MS.gene037810.t1 | MTR_8g074210 | 86.737 | 377 | 48 | 1 | 1 | 377 | 1 | 375 | 0.0 | 668 |
MS.gene037810.t1 | MTR_1g075865 | 96.262 | 107 | 4 | 0 | 169 | 275 | 7 | 113 | 8.70e-72 | 220 |
MS.gene037810.t1 | MTR_8g074320 | 56.436 | 202 | 67 | 3 | 47 | 243 | 37 | 222 | 1.12e-69 | 218 |
MS.gene037810.t1 | MTR_2g042370 | 32.958 | 355 | 223 | 10 | 24 | 369 | 10 | 358 | 6.05e-56 | 187 |
MS.gene037810.t1 | MTR_2g042430 | 33.623 | 345 | 215 | 10 | 29 | 366 | 29 | 366 | 2.35e-55 | 186 |
MS.gene037810.t1 | MTR_2g042420 | 32.394 | 355 | 221 | 12 | 24 | 369 | 6 | 350 | 1.03e-52 | 179 |
MS.gene037810.t1 | MTR_4g050190 | 31.008 | 387 | 222 | 10 | 19 | 363 | 3 | 386 | 1.88e-43 | 155 |
MS.gene037810.t1 | MTR_2g099030 | 32.381 | 315 | 168 | 7 | 62 | 331 | 62 | 376 | 2.20e-41 | 150 |
MS.gene037810.t1 | MTR_2g087780 | 31.481 | 378 | 216 | 12 | 29 | 363 | 13 | 390 | 4.16e-41 | 149 |
MS.gene037810.t1 | MTR_7g090300 | 32.915 | 319 | 172 | 10 | 80 | 363 | 53 | 364 | 2.29e-39 | 144 |
MS.gene037810.t1 | MTR_7g490330 | 35.938 | 256 | 139 | 6 | 80 | 310 | 47 | 302 | 6.34e-39 | 142 |
MS.gene037810.t1 | MTR_7g090320 | 31.003 | 329 | 186 | 7 | 80 | 367 | 58 | 386 | 1.36e-38 | 142 |
MS.gene037810.t1 | MTR_7g490350 | 30.239 | 377 | 201 | 12 | 25 | 363 | 12 | 364 | 2.63e-38 | 141 |
MS.gene037810.t1 | MTR_7g090310 | 30.631 | 333 | 191 | 7 | 75 | 367 | 53 | 385 | 8.86e-38 | 140 |
MS.gene037810.t1 | MTR_5g091980 | 36.957 | 230 | 122 | 7 | 80 | 287 | 48 | 276 | 1.01e-33 | 127 |
MS.gene037810.t1 | MTR_8g074290 | 53.211 | 109 | 47 | 3 | 245 | 351 | 46 | 152 | 3.87e-33 | 121 |
MS.gene037810.t1 | MTR_4g112670 | 33.891 | 239 | 134 | 5 | 80 | 294 | 39 | 277 | 1.27e-30 | 119 |
MS.gene037810.t1 | MTR_4g112650 | 34.043 | 235 | 129 | 5 | 78 | 286 | 36 | 270 | 8.07e-30 | 117 |
MS.gene037810.t1 | MTR_2g058450 | 32.068 | 237 | 136 | 4 | 78 | 289 | 38 | 274 | 4.07e-29 | 115 |
MS.gene037810.t1 | MTR_4g112630 | 33.898 | 236 | 129 | 7 | 78 | 286 | 36 | 271 | 3.66e-27 | 110 |
MS.gene037810.t1 | MTR_0003s0530 | 39.535 | 129 | 77 | 1 | 167 | 294 | 4 | 132 | 2.85e-24 | 99.4 |
MS.gene037810.t1 | MTR_2g058410 | 33.918 | 171 | 107 | 5 | 123 | 288 | 1 | 170 | 4.84e-22 | 94.0 |
MS.gene037810.t1 | MTR_8g075500 | 78.431 | 51 | 11 | 0 | 94 | 144 | 170 | 220 | 1.11e-19 | 87.0 |
MS.gene037810.t1 | MTR_4g112840 | 37.000 | 100 | 63 | 0 | 197 | 296 | 63 | 162 | 8.13e-16 | 75.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037810.t1 | AT3G51430 | 49.444 | 360 | 170 | 7 | 22 | 373 | 11 | 366 | 5.53e-119 | 350 |
MS.gene037810.t1 | AT3G51450 | 49.025 | 359 | 171 | 7 | 23 | 373 | 12 | 366 | 2.47e-117 | 345 |
MS.gene037810.t1 | AT3G51430 | 49.444 | 360 | 168 | 8 | 22 | 373 | 11 | 364 | 3.14e-117 | 345 |
MS.gene037810.t1 | AT3G51420 | 48.611 | 360 | 173 | 7 | 22 | 373 | 11 | 366 | 2.59e-116 | 343 |
MS.gene037810.t1 | AT3G51440 | 48.611 | 360 | 173 | 7 | 22 | 373 | 11 | 366 | 1.18e-115 | 341 |
MS.gene037810.t1 | AT3G59530 | 32.602 | 319 | 174 | 7 | 26 | 304 | 19 | 336 | 1.77e-45 | 161 |
MS.gene037810.t1 | AT3G59530 | 32.602 | 319 | 174 | 7 | 26 | 304 | 19 | 336 | 1.77e-45 | 161 |
MS.gene037810.t1 | AT3G59530 | 32.602 | 319 | 174 | 7 | 26 | 304 | 19 | 336 | 1.77e-45 | 161 |
MS.gene037810.t1 | AT1G08470 | 30.000 | 390 | 226 | 9 | 23 | 368 | 3 | 389 | 7.37e-45 | 159 |
MS.gene037810.t1 | AT5G22020 | 32.099 | 324 | 188 | 7 | 77 | 368 | 72 | 395 | 3.52e-43 | 155 |
MS.gene037810.t1 | AT5G22020 | 32.099 | 324 | 188 | 7 | 77 | 368 | 72 | 395 | 3.52e-43 | 155 |
MS.gene037810.t1 | AT5G22020 | 32.099 | 324 | 188 | 7 | 77 | 368 | 72 | 395 | 3.52e-43 | 155 |
MS.gene037810.t1 | AT3G57030 | 30.530 | 321 | 179 | 11 | 80 | 363 | 56 | 369 | 3.06e-35 | 133 |
MS.gene037810.t1 | AT3G57020 | 28.803 | 309 | 192 | 9 | 80 | 367 | 53 | 354 | 1.18e-29 | 117 |
MS.gene037810.t1 | AT3G57020 | 30.147 | 272 | 163 | 8 | 116 | 367 | 104 | 368 | 1.72e-29 | 117 |
MS.gene037810.t1 | AT2G41290 | 29.878 | 328 | 181 | 10 | 79 | 363 | 50 | 371 | 2.72e-29 | 117 |
MS.gene037810.t1 | AT3G57010 | 28.097 | 331 | 194 | 9 | 80 | 374 | 54 | 376 | 8.84e-28 | 112 |
MS.gene037810.t1 | AT2G41300 | 31.651 | 218 | 142 | 5 | 120 | 331 | 133 | 349 | 1.79e-27 | 112 |
MS.gene037810.t1 | AT1G74020 | 29.524 | 315 | 175 | 11 | 80 | 370 | 38 | 329 | 5.29e-27 | 110 |
MS.gene037810.t1 | AT1G74010 | 33.186 | 226 | 127 | 7 | 80 | 282 | 37 | 261 | 1.58e-26 | 108 |
MS.gene037810.t1 | AT1G74000 | 30.233 | 258 | 155 | 6 | 76 | 308 | 36 | 293 | 8.74e-23 | 98.2 |
Find 86 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCAGTGGTCAATGAAAATT+TGG | 0.096368 | 8.2:-30513539 | None:intergenic |
AGAATCCTTGATTGAGTATT+TGG | 0.126660 | 8.2:-30512128 | None:intergenic |
CCCTTTCATTAGGAAGGTTC+TGG | 0.311857 | 8.2:+30513417 | MS.gene037810:CDS |
ACCGCTGAGGCTATAATAAC+TGG | 0.316840 | 8.2:-30508848 | None:intergenic |
GTTGTTGTCGTTTAAATTGT+AGG | 0.326066 | 8.2:-30513646 | None:intergenic |
TATGACAAAAGGGTATAAAA+TGG | 0.328459 | 8.2:-30513593 | None:intergenic |
TAGCTCAGAAATCTACCATT+AGG | 0.351349 | 8.2:-30512175 | None:intergenic |
TTGACCACTGGGATTAAGAT+TGG | 0.354361 | 8.2:+30513550 | MS.gene037810:CDS |
CCATCATAATGAATGTTATC+AGG | 0.354766 | 8.2:-30512819 | None:intergenic |
CGTAACAACAACATGAGATT+AGG | 0.361874 | 8.2:+30508950 | MS.gene037810:CDS |
TTGAGCATTATGTCCAGTTC+AGG | 0.364269 | 8.2:-30513391 | None:intergenic |
GGATCATAGTAATGTGTTGT+AGG | 0.364483 | 8.2:-30513517 | None:intergenic |
GTTTGCCTTCTAATATATCT+AGG | 0.365632 | 8.2:-30512153 | None:intergenic |
TGCTCAAATACCCTTTCATT+AGG | 0.379431 | 8.2:+30513407 | MS.gene037810:CDS |
GGTGAGACTGCAACTCCATT+AGG | 0.393741 | 8.2:-30512247 | None:intergenic |
ATGAATCGGTCGTTGAAGAT+TGG | 0.395480 | 8.2:+30509089 | MS.gene037810:CDS |
GCATCGTATACCAAATCTTC+AGG | 0.400939 | 8.2:-30509007 | None:intergenic |
TGAATCGGTCGTTGAAGATT+GGG | 0.412828 | 8.2:+30509090 | MS.gene037810:CDS |
TTTGGTATACGATGCTGATA+AGG | 0.423096 | 8.2:+30509015 | MS.gene037810:CDS |
ATACGATGCTGATAAGGGTT+TGG | 0.425897 | 8.2:+30509021 | MS.gene037810:CDS |
AGTAGAGGTCACTCACTAGT+AGG | 0.439456 | 8.2:-30512222 | None:intergenic |
ATGTCAAGACGTATGACAAA+AGG | 0.440499 | 8.2:-30513604 | None:intergenic |
AGTGACCTCTACTTTCCTAA+TGG | 0.443237 | 8.2:+30512232 | MS.gene037810:CDS |
ATGATGGACATGGGCAGTAC+TGG | 0.444773 | 8.2:+30512835 | MS.gene037810:CDS |
TGAATGTTATCAGGCATGCC+AGG | 0.449090 | 8.2:-30512810 | None:intergenic |
AGGTGGAAGACCACTTGGTT+TGG | 0.461808 | 8.2:+30509120 | MS.gene037810:CDS |
TGACCACTGGGATTAAGATT+GGG | 0.462512 | 8.2:+30513551 | MS.gene037810:CDS |
CCGGCTCGACCCTTTCGAAC+CGG | 0.467052 | 8.2:+30508877 | MS.gene037810:CDS |
TTGGTATACGATGCTGATAA+GGG | 0.469023 | 8.2:+30509016 | MS.gene037810:CDS |
AGGAGTTATCACTGTGGACT+TGG | 0.473224 | 8.2:+30513486 | MS.gene037810:CDS |
GTTTATACTAGTTGTGAAGA+TGG | 0.473616 | 8.2:+30509043 | MS.gene037810:CDS |
CCTGATAACATTCATTATGA+TGG | 0.474172 | 8.2:+30512819 | MS.gene037810:CDS |
CAAATACCCTTTCATTAGGA+AGG | 0.478049 | 8.2:+30513411 | MS.gene037810:CDS |
CTCATGTTGTTGTTACGTAA+AGG | 0.483895 | 8.2:-30508944 | None:intergenic |
GTTTAAATTGTAGGTAGAGC+AGG | 0.497425 | 8.2:-30513637 | None:intergenic |
GCCAGAACCTTCCTAATGAA+AGG | 0.497938 | 8.2:-30513418 | None:intergenic |
ATACTAGTTGTGAAGATGGA+TGG | 0.502195 | 8.2:+30509047 | MS.gene037810:CDS |
CCAGTGGTCAATGAAAATTT+GGG | 0.505659 | 8.2:-30513538 | None:intergenic |
GGACATGGGCAGTACTGGAT+TGG | 0.509242 | 8.2:+30512840 | MS.gene037810:CDS |
AACACAGGTGGAAGACCACT+TGG | 0.510446 | 8.2:+30509115 | MS.gene037810:CDS |
TATTGTTGCAGACGCAGATA+AGG | 0.512214 | 8.2:+30509165 | MS.gene037810:CDS |
TCTGTCCTAGATATATTAGA+AGG | 0.514052 | 8.2:+30512148 | MS.gene037810:CDS |
TGGACCGGGTTTGTTTGTCA+AGG | 0.516186 | 8.2:-30508910 | None:intergenic |
ATATTAGAAGGCAAACCTAA+TGG | 0.516846 | 8.2:+30512160 | MS.gene037810:CDS |
TTCATCCAAATACTCAATCA+AGG | 0.517336 | 8.2:+30512123 | MS.gene037810:CDS |
GGGAAAACAACCGGTTCGAA+AGG | 0.518289 | 8.2:-30508887 | None:intergenic |
AAGGAGCGGTTGTAGTGGAC+CGG | 0.518593 | 8.2:-30508925 | None:intergenic |
CCAGAACCTTCCTAATGAAA+GGG | 0.523065 | 8.2:-30513417 | None:intergenic |
CTAATATTCAAAATAACAGA+TGG | 0.527880 | 8.2:+30512058 | MS.gene037810:CDS |
GGACCGGGTTTGTTTGTCAA+GGG | 0.528291 | 8.2:-30508909 | None:intergenic |
TGTCAAGACGTATGACAAAA+GGG | 0.530568 | 8.2:-30513603 | None:intergenic |
TAATATTCAAAATAACAGAT+GGG | 0.530673 | 8.2:+30512059 | MS.gene037810:CDS |
GTACTTGTGACTGAGATTGA+TGG | 0.533589 | 8.2:+30512034 | MS.gene037810:CDS |
GAGAATCACAGTGAATGAAT+CGG | 0.546567 | 8.2:+30509075 | MS.gene037810:CDS |
GGAAAACAACCGGTTCGAAA+GGG | 0.552856 | 8.2:-30508886 | None:intergenic |
AGTCTGAATTTGTCAAAGAA+CGG | 0.559155 | 8.2:+30513463 | MS.gene037810:CDS |
TAATGGAGTTGCAGTCTCAC+CGG | 0.564848 | 8.2:+30512249 | MS.gene037810:CDS |
CCGGTTCGAAAGGGTCGAGC+CGG | 0.565326 | 8.2:-30508877 | None:intergenic |
GTTATCACTGTGGACTTGGA+AGG | 0.570869 | 8.2:+30513490 | MS.gene037810:CDS |
GTAGAGGTCACTCACTAGTA+GGG | 0.571038 | 8.2:-30512221 | None:intergenic |
ATTGGGAATCACATGTATTG+TGG | 0.573834 | 8.2:+30513568 | MS.gene037810:CDS |
TGCAAGAAATATTACATACA+TGG | 0.578745 | 8.2:+30512750 | MS.gene037810:CDS |
AGGAGCGGTTGTAGTGGACC+GGG | 0.583921 | 8.2:-30508924 | None:intergenic |
ACGTAAAGGAGCGGTTGTAG+TGG | 0.584948 | 8.2:-30508930 | None:intergenic |
GAATGTTATCAGGCATGCCA+GGG | 0.588881 | 8.2:-30512809 | None:intergenic |
CCCAGTTATTATAGCCTCAG+CGG | 0.590689 | 8.2:+30508847 | MS.gene037810:CDS |
CCGCTGAGGCTATAATAACT+GGG | 0.592910 | 8.2:-30508847 | None:intergenic |
AACATTCATTATGATGGACA+TGG | 0.593918 | 8.2:+30512825 | MS.gene037810:CDS |
ACCGGGTTTGTTTGTCAAGG+GGG | 0.602489 | 8.2:-30508907 | None:intergenic |
GACCGGGTTTGTTTGTCAAG+GGG | 0.603502 | 8.2:-30508908 | None:intergenic |
AATATTCAAAATAACAGATG+GGG | 0.627610 | 8.2:+30512060 | MS.gene037810:CDS |
TGAGTATTTGGATGAAGCGT+CGG | 0.631980 | 8.2:-30512116 | None:intergenic |
GAAGATTGGGTTAACACAGG+TGG | 0.640222 | 8.2:+30509103 | MS.gene037810:CDS |
ACATTCATTATGATGGACAT+GGG | 0.648960 | 8.2:+30512826 | MS.gene037810:CDS |
CAACTCCATTAGGAAAGTAG+AGG | 0.650316 | 8.2:-30512237 | None:intergenic |
GTTGAAGATTGGGTTAACAC+AGG | 0.650731 | 8.2:+30509100 | MS.gene037810:CDS |
GGGAGAATTATAGCTATGAA+CGG | 0.651872 | 8.2:-30508827 | None:intergenic |
CTGAATTTGTCAAAGAACGG+AGG | 0.657045 | 8.2:+30513466 | MS.gene037810:CDS |
GTTGTTGTTACGTAAAGGAG+CGG | 0.658381 | 8.2:-30508939 | None:intergenic |
GGGGTTGATGTAGCACATGA+TGG | 0.659959 | 8.2:+30512079 | MS.gene037810:CDS |
CCATCAAAAGCCAAACCAAG+TGG | 0.660290 | 8.2:-30509130 | None:intergenic |
GTACTGGATTGGAATAGCCA+CGG | 0.683691 | 8.2:+30512851 | MS.gene037810:CDS |
TGTTATCAGGCATGCCAGGG+AGG | 0.693601 | 8.2:-30512806 | None:intergenic |
ATTCCCAATCTTAATCCCAG+TGG | 0.699708 | 8.2:-30513554 | None:intergenic |
GAGCCGGTAGAAAACCGCTG+AGG | 0.774766 | 8.2:-30508861 | None:intergenic |
GAACGGAGGAGTTATCACTG+TGG | 0.783679 | 8.2:+30513480 | MS.gene037810:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATACATTATTATTTATTTAG+TGG | + | chr8.2:30511907-30511926 | MS.gene037810:intron | 10.0% |
!! | TACATTATTATTTATTTAGT+GGG | + | chr8.2:30511908-30511927 | MS.gene037810:intron | 10.0% |
!!! | CTAAATTTTTTCTTTTTTTA+AGG | + | chr8.2:30509245-30509264 | MS.gene037810:intron | 10.0% |
!!! | TTTCATTTTTATTAACTTTT+GGG | - | chr8.2:30511667-30511686 | None:intergenic | 10.0% |
!! | CATTTAATTAATTATGTATG+TGG | + | chr8.2:30510534-30510553 | MS.gene037810:intron | 15.0% |
!! | TAATATTCAAAATAACAGAT+GGG | + | chr8.2:30512059-30512078 | MS.gene037810:CDS | 15.0% |
!!! | AAAATATTTGATGACTTTAA+GGG | - | chr8.2:30509571-30509590 | None:intergenic | 15.0% |
!!! | AAATCAATGGTTTTTTTTTT+TGG | - | chr8.2:30509346-30509365 | None:intergenic | 15.0% |
!!! | AGAGTTATATAATTTTTTTC+CGG | + | chr8.2:30509893-30509912 | MS.gene037810:intron | 15.0% |
!!! | AGATTTTAAGAAAAAATCAA+TGG | - | chr8.2:30509359-30509378 | None:intergenic | 15.0% |
!!! | ATATATTTTTTTTGTACAAC+CGG | - | chr8.2:30509915-30509934 | None:intergenic | 15.0% |
!!! | CTTTCATTTTTATTAACTTT+TGG | - | chr8.2:30511668-30511687 | None:intergenic | 15.0% |
!!! | GTTACATTATCATTTTTTTT+TGG | + | chr8.2:30511857-30511876 | MS.gene037810:intron | 15.0% |
!!! | TGGACTTATTTTTATTTTAT+GGG | + | chr8.2:30512708-30512727 | MS.gene037810:intron | 15.0% |
!!! | TTCATTTTTATTAACTTTTG+GGG | - | chr8.2:30511666-30511685 | None:intergenic | 15.0% |
!!! | TTGGACTTATTTTTATTTTA+TGG | + | chr8.2:30512707-30512726 | MS.gene037810:intron | 15.0% |
!!! | TTTTAAGGTAAAAAAAGTTA+AGG | + | chr8.2:30509260-30509279 | MS.gene037810:intron | 15.0% |
!!! | TTTTCTTAAAATCTAAGAAT+AGG | + | chr8.2:30509365-30509384 | MS.gene037810:intron | 15.0% |
!! | AAAATATGTAGAATTGTTGT+AGG | - | chr8.2:30509504-30509523 | None:intergenic | 20.0% |
!! | AATAAATTTCCATCAAACTA+AGG | + | chr8.2:30512445-30512464 | MS.gene037810:intron | 20.0% |
!! | AATATTCAAAATAACAGATG+GGG | + | chr8.2:30512060-30512079 | MS.gene037810:CDS | 20.0% |
!! | ATAAATTTCCATCAAACTAA+GGG | + | chr8.2:30512446-30512465 | MS.gene037810:intron | 20.0% |
!! | ATAATAAACATGTCATATGT+CGG | - | chr8.2:30510090-30510109 | None:intergenic | 20.0% |
!! | ATATAATATGAGTTTGAAGA+TGG | + | chr8.2:30509453-30509472 | MS.gene037810:intron | 20.0% |
!! | ATATATAAATTAGAGTGCAA+TGG | + | chr8.2:30509929-30509948 | MS.gene037810:intron | 20.0% |
!! | CATTTATTAAATGATGTATG+TGG | - | chr8.2:30510573-30510592 | None:intergenic | 20.0% |
!! | CTAATATTCAAAATAACAGA+TGG | + | chr8.2:30512058-30512077 | MS.gene037810:CDS | 20.0% |
!! | TAAAAAACAGAAAATTGAGA+CGG | + | chr8.2:30511415-30511434 | MS.gene037810:intron | 20.0% |
!! | TATATAATCGAAACTACATA+GGG | - | chr8.2:30512560-30512579 | None:intergenic | 20.0% |
!! | TTATATAATCGAAACTACAT+AGG | - | chr8.2:30512561-30512580 | None:intergenic | 20.0% |
!!! | AAAAGTGCTAATTATATGTT+GGG | + | chr8.2:30513116-30513135 | MS.gene037810:intron | 20.0% |
!!! | AACGTGTTTTTTAAGTTTTA+TGG | - | chr8.2:30512603-30512622 | None:intergenic | 20.0% |
!!! | ACAATTCTACATATTTTGAT+TGG | + | chr8.2:30509507-30509526 | MS.gene037810:intron | 20.0% |
!!! | ACGTGTTTTTTAAGTTTTAT+GGG | - | chr8.2:30512602-30512621 | None:intergenic | 20.0% |
!!! | ATTTTAATATGTTCGTTTGA+GGG | - | chr8.2:30509407-30509426 | None:intergenic | 20.0% |
!!! | CAAAATATTTGATGACTTTA+AGG | - | chr8.2:30509572-30509591 | None:intergenic | 20.0% |
!!! | CAAATACCTATATTTTTAGT+TGG | - | chr8.2:30509735-30509754 | None:intergenic | 20.0% |
!!! | CATCTGTTATTTTGAATATT+AGG | - | chr8.2:30512060-30512079 | None:intergenic | 20.0% |
!!! | TATTTTAATATGTTCGTTTG+AGG | - | chr8.2:30509408-30509427 | None:intergenic | 20.0% |
!!! | TTTTGGTTACATAAAAGTTT+AGG | - | chr8.2:30510377-30510396 | None:intergenic | 20.0% |
! | AAAAAACAGAAAATTGAGAC+GGG | + | chr8.2:30511416-30511435 | MS.gene037810:intron | 25.0% |
! | AAAAATAATTTGGACTGTCA+CGG | - | chr8.2:30510772-30510791 | None:intergenic | 25.0% |
! | AAATATGTGACATCCAATTT+AGG | + | chr8.2:30513062-30513081 | MS.gene037810:intron | 25.0% |
! | AATTAGATTAGTGAATGAGT+GGG | - | chr8.2:30511955-30511974 | None:intergenic | 25.0% |
! | ACACGATAACAAAATTTGAT+TGG | - | chr8.2:30509989-30510008 | None:intergenic | 25.0% |
! | AGAAAAACTAAAACAATCCT+GGG | - | chr8.2:30509303-30509322 | None:intergenic | 25.0% |
! | AGATTAATCTCTACAATTGT+GGG | + | chr8.2:30512976-30512995 | MS.gene037810:intron | 25.0% |
! | ATGAGTTACCAATACATATA+AGG | - | chr8.2:30513323-30513342 | None:intergenic | 25.0% |
! | ATGCATCCAACTAAAAATAT+AGG | + | chr8.2:30509726-30509745 | MS.gene037810:intron | 25.0% |
! | ATTAATCAATGATATGCTAC+AGG | + | chr8.2:30511976-30511995 | MS.gene037810:intron | 25.0% |
! | CACAATGTGTTTATAAATAG+GGG | + | chr8.2:30511234-30511253 | MS.gene037810:intron | 25.0% |
! | CTATAACATAAATTTCTGCA+TGG | - | chr8.2:30510733-30510752 | None:intergenic | 25.0% |
! | GCACAATGTGTTTATAAATA+GGG | + | chr8.2:30511233-30511252 | MS.gene037810:intron | 25.0% |
! | GGCTCTACATAAAAATAATT+TGG | - | chr8.2:30510782-30510801 | None:intergenic | 25.0% |
! | TAAATTTCCATCAAACTAAG+GGG | + | chr8.2:30512447-30512466 | MS.gene037810:intron | 25.0% |
! | TAATTAGATTAGTGAATGAG+TGG | - | chr8.2:30511956-30511975 | None:intergenic | 25.0% |
! | TAGAAAAACTAAAACAATCC+TGG | - | chr8.2:30509304-30509323 | None:intergenic | 25.0% |
! | TGAGTTACCAATACATATAA+GGG | - | chr8.2:30513322-30513341 | None:intergenic | 25.0% |
! | TGCATTTGTAGAAATATTCA+CGG | - | chr8.2:30509711-30509730 | None:intergenic | 25.0% |
! | TGTAGTTTCGATTATATAAC+CGG | + | chr8.2:30512562-30512581 | MS.gene037810:intron | 25.0% |
! | TTAATCAATGATATGCTACA+GGG | + | chr8.2:30511977-30511996 | MS.gene037810:intron | 25.0% |
!! | AACAATCGACAATGATATTT+TGG | - | chr8.2:30511780-30511799 | None:intergenic | 25.0% |
!! | AATTGGATGTCACATATTTT+TGG | - | chr8.2:30513061-30513080 | None:intergenic | 25.0% |
!! | AGAAAACAGTAGGATTTTAT+TGG | + | chr8.2:30510875-30510894 | MS.gene037810:intron | 25.0% |
!! | CTGACAATTTGTTTATAAGT+GGG | + | chr8.2:30511001-30511020 | MS.gene037810:intron | 25.0% |
!! | CTTTTATACTTGTACTAACA+AGG | - | chr8.2:30512324-30512343 | None:intergenic | 25.0% |
!! | GAAAACAGTAGGATTTTATT+GGG | + | chr8.2:30510876-30510895 | MS.gene037810:intron | 25.0% |
!! | TATGACAAAAGGGTATAAAA+TGG | - | chr8.2:30513596-30513615 | None:intergenic | 25.0% |
!! | TCTGACAATTTGTTTATAAG+TGG | + | chr8.2:30511000-30511019 | MS.gene037810:intron | 25.0% |
!! | TGACAATTTGTTTATAAGTG+GGG | + | chr8.2:30511002-30511021 | MS.gene037810:intron | 25.0% |
!! | TTTTAATATGTTCGTTTGAG+GGG | - | chr8.2:30509406-30509425 | None:intergenic | 25.0% |
!! | TTTTCTGTTCATTGTACAAA+TGG | - | chr8.2:30513100-30513119 | None:intergenic | 25.0% |
!! | TTTTTGCTTATAATAGTGAC+TGG | + | chr8.2:30510608-30510627 | MS.gene037810:intron | 25.0% |
!!! | ATTTTGGAGTAGTAACTATT+TGG | - | chr8.2:30511740-30511759 | None:intergenic | 25.0% |
!!! | CGTGTTTTTTAAGTTTTATG+GGG | - | chr8.2:30512601-30512620 | None:intergenic | 25.0% |
!!! | GAAAAGTGCTAATTATATGT+TGG | + | chr8.2:30513115-30513134 | MS.gene037810:intron | 25.0% |
!!! | TAATCATACATGAGGTATTT+TGG | - | chr8.2:30511756-30511775 | None:intergenic | 25.0% |
!!! | TCCAATTTAGGTTTTTCTTA+AGG | + | chr8.2:30513074-30513093 | MS.gene037810:intron | 25.0% |
!!! | TTGAATGTTTTTTCTGCAAA+TGG | + | chr8.2:30509215-30509234 | MS.gene037810:intron | 25.0% |
!!! | TTTTTAATTCACGATGCATT+CGG | - | chr8.2:30510938-30510957 | None:intergenic | 25.0% |
!!! | TTTTTGTTTATAACAGTGAC+CGG | - | chr8.2:30510503-30510522 | None:intergenic | 25.0% |
!!! | TTTTTTTTTGGTCAAGTCAA+TGG | - | chr8.2:30509334-30509353 | None:intergenic | 25.0% |
AAAAAAACTAACTTTGCAGC+CGG | + | chr8.2:30510394-30510413 | MS.gene037810:intron | 30.0% | |
AAAAACTAAAACAATCCTGG+GGG | - | chr8.2:30509301-30509320 | None:intergenic | 30.0% | |
AAATGACTTGAGAAAACAGT+AGG | + | chr8.2:30510865-30510884 | MS.gene037810:intron | 30.0% | |
AAGGTGATAAACAACTTACA+TGG | - | chr8.2:30512305-30512324 | None:intergenic | 30.0% | |
AGAATCCTTGATTGAGTATT+TGG | - | chr8.2:30512131-30512150 | None:intergenic | 30.0% | |
AGTCTGAATTTGTCAAAGAA+CGG | + | chr8.2:30513463-30513482 | MS.gene037810:CDS | 30.0% | |
ATATTAGAAGGCAAACCTAA+TGG | + | chr8.2:30512160-30512179 | MS.gene037810:CDS | 30.0% | |
CAATGTTAAGAGTTTCACAT+CGG | + | chr8.2:30510966-30510985 | MS.gene037810:intron | 30.0% | |
CCATCATAATGAATGTTATC+AGG | - | chr8.2:30512822-30512841 | None:intergenic | 30.0% | |
CCTGATAACATTCATTATGA+TGG | + | chr8.2:30512819-30512838 | MS.gene037810:CDS | 30.0% | |
GAAAAACTAAAACAATCCTG+GGG | - | chr8.2:30509302-30509321 | None:intergenic | 30.0% | |
GAGATTAATCTCTACAATTG+TGG | + | chr8.2:30512975-30512994 | MS.gene037810:intron | 30.0% | |
GCCTTAAGAAAAACCTAAAT+TGG | - | chr8.2:30513078-30513097 | None:intergenic | 30.0% | |
GGCACAATGTGTTTATAAAT+AGG | + | chr8.2:30511232-30511251 | MS.gene037810:intron | 30.0% | |
GGTTACATAAAAGTTTAGGT+TGG | - | chr8.2:30510373-30510392 | None:intergenic | 30.0% | |
GTTTATACTAGTTGTGAAGA+TGG | + | chr8.2:30509043-30509062 | MS.gene037810:CDS | 30.0% | |
GTTTGCCTTCTAATATATCT+AGG | - | chr8.2:30512156-30512175 | None:intergenic | 30.0% | |
TAATATGAGTTTGAAGATGG+TGG | + | chr8.2:30509456-30509475 | MS.gene037810:intron | 30.0% | |
TCAAGTATTTCCCATATTCA+TGG | - | chr8.2:30510428-30510447 | None:intergenic | 30.0% | |
TCTGTCCTAGATATATTAGA+AGG | + | chr8.2:30512148-30512167 | MS.gene037810:CDS | 30.0% | |
TCTTTCTTGCGTTAAATCAT+TGG | + | chr8.2:30511819-30511838 | MS.gene037810:intron | 30.0% | |
TTCATCCAAATACTCAATCA+AGG | + | chr8.2:30512123-30512142 | MS.gene037810:CDS | 30.0% | |
! | ATACTTCCATGACATAGTTT+TGG | + | chr8.2:30511455-30511474 | MS.gene037810:intron | 30.0% |
! | ATTTTATGGGATAATGTTGC+AGG | + | chr8.2:30512721-30512740 | MS.gene037810:intron | 30.0% |
! | GACAATTTGTTTATAAGTGG+GGG | + | chr8.2:30511003-30511022 | MS.gene037810:intron | 30.0% |
! | GGTGTGCTTTATTGAAATTT+GGG | + | chr8.2:30512468-30512487 | MS.gene037810:intron | 30.0% |
! | TTAGAAGTATGCAAGTAACA+TGG | - | chr8.2:30512500-30512519 | None:intergenic | 30.0% |
! | TTTTCTGTGCTACCTTTTTT+TGG | - | chr8.2:30512777-30512796 | None:intergenic | 30.0% |
!! | AACATTCATTATGATGGACA+TGG | + | chr8.2:30512825-30512844 | MS.gene037810:CDS | 30.0% |
!! | AAGACGACAAAATTTTGATC+CGG | - | chr8.2:30512271-30512290 | None:intergenic | 30.0% |
!! | ACATTCATTATGATGGACAT+GGG | + | chr8.2:30512826-30512845 | MS.gene037810:CDS | 30.0% |
!! | CATAAAAGTTTAGGTTGGTT+CGG | - | chr8.2:30510368-30510387 | None:intergenic | 30.0% |
!! | TTTTAATTCACGATGCATTC+GGG | - | chr8.2:30510937-30510956 | None:intergenic | 30.0% |
!!! | AAAGTGCTACTCCTTTTTTT+GGG | + | chr8.2:30511605-30511624 | MS.gene037810:intron | 30.0% |
!!! | ATTTTGGCTAATCATACATG+AGG | - | chr8.2:30511764-30511783 | None:intergenic | 30.0% |
!!! | CAGATTTTAGAATCCGAATA+GGG | + | chr8.2:30512632-30512651 | MS.gene037810:intron | 30.0% |
!!! | GCTGCAAAGTTAGTTTTTTT+TGG | - | chr8.2:30510394-30510413 | None:intergenic | 30.0% |
!!! | TCAGATTTTAGAATCCGAAT+AGG | + | chr8.2:30512631-30512650 | MS.gene037810:intron | 30.0% |
!!! | TTCAAGACTTTGTTTTTCGA+CGG | - | chr8.2:30509661-30509680 | None:intergenic | 30.0% |
!!! | TTTCTGTGCTACCTTTTTTT+GGG | - | chr8.2:30512776-30512795 | None:intergenic | 30.0% |
ACCACTTAGAAATTGTGGTT+GGG | - | chr8.2:30511071-30511090 | None:intergenic | 35.0% | |
ACGCTAACATGTGTCTATAA+AGG | - | chr8.2:30513297-30513316 | None:intergenic | 35.0% | |
AGCGTTTCCCTTATATGTAT+TGG | + | chr8.2:30513312-30513331 | MS.gene037810:intron | 35.0% | |
ATACTAGTTGTGAAGATGGA+TGG | + | chr8.2:30509047-30509066 | MS.gene037810:CDS | 35.0% | |
ATCTCACATCGAATATGAGA+TGG | + | chr8.2:30511211-30511230 | MS.gene037810:intron | 35.0% | |
ATGTCAAGACGTATGACAAA+AGG | - | chr8.2:30513607-30513626 | None:intergenic | 35.0% | |
ATGTCATATGTCGGAAAATG+TGG | - | chr8.2:30510081-30510100 | None:intergenic | 35.0% | |
ATTGGGAATCACATGTATTG+TGG | + | chr8.2:30513568-30513587 | MS.gene037810:CDS | 35.0% | |
ATTTCCCATATTCATGGCAT+GGG | - | chr8.2:30510422-30510441 | None:intergenic | 35.0% | |
CAAAAAAAGGAGTAGCACTT+TGG | - | chr8.2:30511606-30511625 | None:intergenic | 35.0% | |
CAAATACCCTTTCATTAGGA+AGG | + | chr8.2:30513411-30513430 | MS.gene037810:CDS | 35.0% | |
CCAGTGGTCAATGAAAATTT+GGG | - | chr8.2:30513541-30513560 | None:intergenic | 35.0% | |
CGTAACAACAACATGAGATT+AGG | + | chr8.2:30508950-30508969 | MS.gene037810:CDS | 35.0% | |
CTGATACCACTTAGAAATTG+TGG | - | chr8.2:30511076-30511095 | None:intergenic | 35.0% | |
GACCTACTTCTAAATGTTGT+TGG | + | chr8.2:30512688-30512707 | MS.gene037810:intron | 35.0% | |
GAGAATCACAGTGAATGAAT+CGG | + | chr8.2:30509075-30509094 | MS.gene037810:CDS | 35.0% | |
GGATCATAGTAATGTGTTGT+AGG | - | chr8.2:30513520-30513539 | None:intergenic | 35.0% | |
GGGAGAATTATAGCTATGAA+CGG | - | chr8.2:30508830-30508849 | None:intergenic | 35.0% | |
GTCCAACAACATTTAGAAGT+AGG | - | chr8.2:30512693-30512712 | None:intergenic | 35.0% | |
GTGATAAACAACTTACATGG+AGG | - | chr8.2:30512302-30512321 | None:intergenic | 35.0% | |
GTTTGTGTATTTCTTCTGTC+AGG | + | chr8.2:30513360-30513379 | MS.gene037810:intron | 35.0% | |
TACCACTTAGAAATTGTGGT+TGG | - | chr8.2:30511072-30511091 | None:intergenic | 35.0% | |
TAGCTCAGAAATCTACCATT+AGG | - | chr8.2:30512178-30512197 | None:intergenic | 35.0% | |
TATTTCCCATATTCATGGCA+TGG | - | chr8.2:30510423-30510442 | None:intergenic | 35.0% | |
TGCTATTAGGTTTCCGTTAT+CGG | + | chr8.2:30511124-30511143 | MS.gene037810:intron | 35.0% | |
TGCTCAAATACCCTTTCATT+AGG | + | chr8.2:30513407-30513426 | MS.gene037810:CDS | 35.0% | |
TGCTTATAATAGTGACTGGA+GGG | + | chr8.2:30510612-30510631 | MS.gene037810:intron | 35.0% | |
TGTCAAGACGTATGACAAAA+GGG | - | chr8.2:30513606-30513625 | None:intergenic | 35.0% | |
TGTCATATGTCGGAAAATGT+GGG | - | chr8.2:30510080-30510099 | None:intergenic | 35.0% | |
TTGAGATGAACTAGAACTCA+CGG | - | chr8.2:30510454-30510473 | None:intergenic | 35.0% | |
TTGCTTATAATAGTGACTGG+AGG | + | chr8.2:30510611-30510630 | MS.gene037810:intron | 35.0% | |
TTGGTATACGATGCTGATAA+GGG | + | chr8.2:30509016-30509035 | MS.gene037810:CDS | 35.0% | |
TTTAATTCACGATGCATTCG+GGG | - | chr8.2:30510936-30510955 | None:intergenic | 35.0% | |
TTTGGTATACGATGCTGATA+AGG | + | chr8.2:30509015-30509034 | MS.gene037810:CDS | 35.0% | |
! | ACTTTTTGGACCTGAAGATT+TGG | + | chr8.2:30508997-30509016 | MS.gene037810:CDS | 35.0% |
! | AGTGAGATTTGAGATCCATA+TGG | - | chr8.2:30510143-30510162 | None:intergenic | 35.0% |
! | CCAAATTTTCATTGACCACT+GGG | + | chr8.2:30513539-30513558 | MS.gene037810:CDS | 35.0% |
! | CTCATGTTGTTGTTACGTAA+AGG | - | chr8.2:30508947-30508966 | None:intergenic | 35.0% |
! | GGGTGTGCTTTATTGAAATT+TGG | + | chr8.2:30512467-30512486 | MS.gene037810:intron | 35.0% |
!! | TTAACTTTTGGGGACTTCTA+TGG | - | chr8.2:30511656-30511675 | None:intergenic | 35.0% |
!!! | AAGTGCTACTCCTTTTTTTG+GGG | + | chr8.2:30511606-30511625 | MS.gene037810:intron | 35.0% |
!!! | AGGGTTGTCTTTTTTGTTGA+TGG | - | chr8.2:30512205-30512224 | None:intergenic | 35.0% |
!!! | CAAAGTGCTACTCCTTTTTT+TGG | + | chr8.2:30511604-30511623 | MS.gene037810:intron | 35.0% |
ACACACACACACACACAAAA+GGG | + | chr8.2:30513015-30513034 | MS.gene037810:intron | 40.0% | |
AGGATCTGAAAAAGTTGCAG+AGG | + | chr8.2:30508970-30508989 | MS.gene037810:CDS | 40.0% | |
AGTGACATCAAATGATACCG+TGG | - | chr8.2:30512871-30512890 | None:intergenic | 40.0% | |
AGTGACCTCTACTTTCCTAA+TGG | + | chr8.2:30512232-30512251 | MS.gene037810:CDS | 40.0% | |
AGTTGTATCGCTACATGTGA+TGG | - | chr8.2:30511268-30511287 | None:intergenic | 40.0% | |
ATAAAGAGTGATGCTACCGA+TGG | - | chr8.2:30511293-30511312 | None:intergenic | 40.0% | |
ATACGATGCTGATAAGGGTT+TGG | + | chr8.2:30509021-30509040 | MS.gene037810:CDS | 40.0% | |
ATGAATCGGTCGTTGAAGAT+TGG | + | chr8.2:30509089-30509108 | MS.gene037810:CDS | 40.0% | |
ATGGCACCAAAACTATGTCA+TGG | - | chr8.2:30511464-30511483 | None:intergenic | 40.0% | |
ATTCCCAATCTTAATCCCAG+TGG | - | chr8.2:30513557-30513576 | None:intergenic | 40.0% | |
CAACTCCATTAGGAAAGTAG+AGG | - | chr8.2:30512240-30512259 | None:intergenic | 40.0% | |
CATTTGAAGAATACACCCTC+CGG | + | chr8.2:30510481-30510500 | MS.gene037810:intron | 40.0% | |
CCAGAACCTTCCTAATGAAA+GGG | - | chr8.2:30513420-30513439 | None:intergenic | 40.0% | |
CCCAGTGGTCAATGAAAATT+TGG | - | chr8.2:30513542-30513561 | None:intergenic | 40.0% | |
CGGTAGCATCACTCTTTATA+GGG | + | chr8.2:30511294-30511313 | MS.gene037810:intron | 40.0% | |
CTAACACAACTCCAGAAAAC+TGG | - | chr8.2:30511047-30511066 | None:intergenic | 40.0% | |
CTGAATTTGTCAAAGAACGG+AGG | + | chr8.2:30513466-30513485 | MS.gene037810:CDS | 40.0% | |
GCATCGTATACCAAATCTTC+AGG | - | chr8.2:30509010-30509029 | None:intergenic | 40.0% | |
GCTATTAGGTTTCCGTTATC+GGG | + | chr8.2:30511125-30511144 | MS.gene037810:intron | 40.0% | |
GGAGCATGGACATAAATGAT+GGG | - | chr8.2:30511154-30511173 | None:intergenic | 40.0% | |
GGATCTGAAAAAGTTGCAGA+GGG | + | chr8.2:30508971-30508990 | MS.gene037810:CDS | 40.0% | |
GTACTTGTGACTGAGATTGA+TGG | + | chr8.2:30512034-30512053 | MS.gene037810:CDS | 40.0% | |
GTTGAAGATTGGGTTAACAC+AGG | + | chr8.2:30509100-30509119 | MS.gene037810:CDS | 40.0% | |
GTTTCACATCGGATATGAGA+TGG | + | chr8.2:30510977-30510996 | MS.gene037810:intron | 40.0% | |
TAAAGAGTGATGCTACCGAT+GGG | - | chr8.2:30511292-30511311 | None:intergenic | 40.0% | |
TATTGTTGCAGACGCAGATA+AGG | + | chr8.2:30509165-30509184 | MS.gene037810:CDS | 40.0% | |
TCGGTAGCATCACTCTTTAT+AGG | + | chr8.2:30511293-30511312 | MS.gene037810:intron | 40.0% | |
TGAATCGGTCGTTGAAGATT+GGG | + | chr8.2:30509090-30509109 | MS.gene037810:CDS | 40.0% | |
TGACCACTGGGATTAAGATT+GGG | + | chr8.2:30513551-30513570 | MS.gene037810:CDS | 40.0% | |
TGAGTATTTGGATGAAGCGT+CGG | - | chr8.2:30512119-30512138 | None:intergenic | 40.0% | |
TGGAGCATGGACATAAATGA+TGG | - | chr8.2:30511155-30511174 | None:intergenic | 40.0% | |
TGTTTATAACAGTGACCGGA+GGG | - | chr8.2:30510499-30510518 | None:intergenic | 40.0% | |
TTATGTAGAGCCACCATTCA+CGG | + | chr8.2:30510790-30510809 | MS.gene037810:intron | 40.0% | |
TTGACCACTGGGATTAAGAT+TGG | + | chr8.2:30513550-30513569 | MS.gene037810:CDS | 40.0% | |
TTGAGCATTATGTCCAGTTC+AGG | - | chr8.2:30513394-30513413 | None:intergenic | 40.0% | |
TTGTTTATAACAGTGACCGG+AGG | - | chr8.2:30510500-30510519 | None:intergenic | 40.0% | |
! | CCCAAATTTTCATTGACCAC+TGG | + | chr8.2:30513538-30513557 | MS.gene037810:CDS | 40.0% |
! | GTTGTTGTTACGTAAAGGAG+CGG | - | chr8.2:30508942-30508961 | None:intergenic | 40.0% |
!! | GATAACGGAAACCTAATAGC+AGG | - | chr8.2:30511125-30511144 | None:intergenic | 40.0% |
!! | GGAAGTATTTCCCCAAAAAG+AGG | - | chr8.2:30511443-30511462 | None:intergenic | 40.0% |
!!! | CAGTTTTCTGGAGTTGTGTT+AGG | + | chr8.2:30511045-30511064 | MS.gene037810:intron | 40.0% |
!!! | CTTTTTTTGGGGTGAAACGA+GGG | + | chr8.2:30511617-30511636 | MS.gene037810:intron | 40.0% |
!!! | GGTTTGGCTTTTGATGGAAA+TGG | + | chr8.2:30509136-30509155 | MS.gene037810:CDS | 40.0% |
!!! | TGACATAGTTTTGGTGCCAT+TGG | + | chr8.2:30511464-30511483 | MS.gene037810:intron | 40.0% |
!!! | TTTTTTTGGGGTGAAACGAG+GGG | + | chr8.2:30511618-30511637 | MS.gene037810:intron | 40.0% |
AACGGAAACCTAATAGCAGG+TGG | - | chr8.2:30511122-30511141 | None:intergenic | 45.0% | |
AATGGCTAGGATTTCCCCAA+TGG | - | chr8.2:30511492-30511511 | None:intergenic | 45.0% | |
ACCGCTGAGGCTATAATAAC+TGG | - | chr8.2:30508851-30508870 | None:intergenic | 45.0% | |
AGGAGTTATCACTGTGGACT+TGG | + | chr8.2:30513486-30513505 | MS.gene037810:CDS | 45.0% | |
AGTAGAGGTCACTCACTAGT+AGG | - | chr8.2:30512225-30512244 | None:intergenic | 45.0% | |
ATATGGAGAACGTGGGAAGA+TGG | - | chr8.2:30510126-30510145 | None:intergenic | 45.0% | |
ATCCACACACATCAATGGCT+AGG | - | chr8.2:30511505-30511524 | None:intergenic | 45.0% | |
ATCCTAGCCATTGATGTGTG+TGG | + | chr8.2:30511500-30511519 | MS.gene037810:intron | 45.0% | |
ATCTTCCCACGTTCTCCATA+TGG | + | chr8.2:30510125-30510144 | MS.gene037810:intron | 45.0% | |
CACACACACACACACACAAA+AGG | + | chr8.2:30513014-30513033 | MS.gene037810:intron | 45.0% | |
CACACATCCACACACATCAA+TGG | - | chr8.2:30511510-30511529 | None:intergenic | 45.0% | |
CACCAATGACACCAAAGCTA+TGG | + | chr8.2:30511578-30511597 | MS.gene037810:intron | 45.0% | |
CCATCAAAAGCCAAACCAAG+TGG | - | chr8.2:30509133-30509152 | None:intergenic | 45.0% | |
CCCAGTTATTATAGCCTCAG+CGG | + | chr8.2:30508847-30508866 | MS.gene037810:CDS | 45.0% | |
CCCTTTCATTAGGAAGGTTC+TGG | + | chr8.2:30513417-30513436 | MS.gene037810:CDS | 45.0% | |
CCGCTGAGGCTATAATAACT+GGG | - | chr8.2:30508850-30508869 | None:intergenic | 45.0% | |
CCTCGTTTCACCCCAAAAAA+AGG | - | chr8.2:30511619-30511638 | None:intergenic | 45.0% | |
GAAGATTGGGTTAACACAGG+TGG | + | chr8.2:30509103-30509122 | MS.gene037810:CDS | 45.0% | |
GAATGTTATCAGGCATGCCA+GGG | - | chr8.2:30512812-30512831 | None:intergenic | 45.0% | |
GAGATCCATATGGAGAACGT+GGG | - | chr8.2:30510133-30510152 | None:intergenic | 45.0% | |
GCCAGAACCTTCCTAATGAA+AGG | - | chr8.2:30513421-30513440 | None:intergenic | 45.0% | |
GCCCAACCACAATTTCTAAG+TGG | + | chr8.2:30511067-30511086 | MS.gene037810:intron | 45.0% | |
GTACCTCTATAAGTGCCCTT+TGG | + | chr8.2:30510305-30510324 | MS.gene037810:intron | 45.0% | |
GTAGAGGTCACTCACTAGTA+GGG | - | chr8.2:30512224-30512243 | None:intergenic | 45.0% | |
GTAGCGATACAACTTCCCAT+CGG | + | chr8.2:30511274-30511293 | MS.gene037810:intron | 45.0% | |
GTGTGTGTGTGTGTGTGAAT+TGG | - | chr8.2:30513011-30513030 | None:intergenic | 45.0% | |
GTTATCACTGTGGACTTGGA+AGG | + | chr8.2:30513490-30513509 | MS.gene037810:CDS | 45.0% | |
TAATGGAGTTGCAGTCTCAC+CGG | + | chr8.2:30512249-30512268 | MS.gene037810:CDS | 45.0% | |
TAGAGTGCAATGGACATGCA+CGG | + | chr8.2:30509939-30509958 | MS.gene037810:intron | 45.0% | |
TATGGAGAACGTGGGAAGAT+GGG | - | chr8.2:30510125-30510144 | None:intergenic | 45.0% | |
TATGTAGAGCCACCATTCAC+GGG | + | chr8.2:30510791-30510810 | MS.gene037810:intron | 45.0% | |
TGAATGTTATCAGGCATGCC+AGG | - | chr8.2:30512813-30512832 | None:intergenic | 45.0% | |
TGAGATCCATATGGAGAACG+TGG | - | chr8.2:30510134-30510153 | None:intergenic | 45.0% | |
TGATGTGTGTGGATGTGTGT+GGG | + | chr8.2:30511511-30511530 | MS.gene037810:intron | 45.0% | |
TTGATGTGTGTGGATGTGTG+TGG | + | chr8.2:30511510-30511529 | MS.gene037810:intron | 45.0% | |
TTGTCAAGGGGGAAAACAAC+CGG | - | chr8.2:30508899-30508918 | None:intergenic | 45.0% | |
! | AAGCACACCCCTTAGTTTGA+TGG | - | chr8.2:30512457-30512476 | None:intergenic | 45.0% |
! | ATGGGGTGTTCATACTGTTC+CGG | - | chr8.2:30512584-30512603 | None:intergenic | 45.0% |
! | ATTGAGACGGGACCTCTTTT+TGG | + | chr8.2:30511428-30511447 | MS.gene037810:intron | 45.0% |
! | GTACTGGATTGGAATAGCCA+CGG | + | chr8.2:30512851-30512870 | MS.gene037810:CDS | 45.0% |
! | GTATCGCTACATGTGATGGA+AGG | - | chr8.2:30511264-30511283 | None:intergenic | 45.0% |
! | GTTGCAGAGGGAGAACTTTT+TGG | + | chr8.2:30508983-30509002 | MS.gene037810:CDS | 45.0% |
! | TACCTCAGAAGCCAGTTTTC+TGG | + | chr8.2:30511033-30511052 | MS.gene037810:intron | 45.0% |
! | TCAGGCATTTTCTCCTGAAC+TGG | + | chr8.2:30513378-30513397 | MS.gene037810:intron | 45.0% |
! | TTGAGACGGGACCTCTTTTT+GGG | + | chr8.2:30511429-30511448 | MS.gene037810:intron | 45.0% |
! | TTTAGTGGGCACATCATGCA+TGG | + | chr8.2:30511922-30511941 | MS.gene037810:intron | 45.0% |
!! | AATGATGGGTGACCCGATAA+CGG | - | chr8.2:30511140-30511159 | None:intergenic | 45.0% |
!! | GAAAAGTTTTGTGACCTCCC+TGG | + | chr8.2:30512792-30512811 | MS.gene037810:CDS | 45.0% |
!! | GGAAAACAACCGGTTCGAAA+GGG | - | chr8.2:30508889-30508908 | None:intergenic | 45.0% |
!! | TGCCATAGCTTTGGTGTCAT+TGG | - | chr8.2:30511583-30511602 | None:intergenic | 45.0% |
!! | TTGGCTCAGTTGGTAAGGAA+CGG | + | chr8.2:30510207-30510226 | MS.gene037810:intron | 45.0% |
!!! | CCACTTGGTTTGGCTTTTGA+TGG | + | chr8.2:30509130-30509149 | MS.gene037810:CDS | 45.0% |
!!! | CCTTTTTTTGGGGTGAAACG+AGG | + | chr8.2:30511616-30511635 | MS.gene037810:intron | 45.0% |
!!! | ATTTTTAAATACTTTTTTTT+TGG | + | chr8.2:30509820-30509839 | MS.gene037810:intron | 5.0% |
!!! | TTAAATATTTTTTATTTAAG+TGG | - | chr8.2:30511360-30511379 | None:intergenic | 5.0% |
AACACAGGTGGAAGACCACT+TGG | + | chr8.2:30509115-30509134 | MS.gene037810:CDS | 50.0% | |
AACTGAGCCAACGTGTGTGT+TGG | - | chr8.2:30510198-30510217 | None:intergenic | 50.0% | |
ACGTAAAGGAGCGGTTGTAG+TGG | - | chr8.2:30508933-30508952 | None:intergenic | 50.0% | |
ACTAAAACAATCCTGGGGGC+TGG | - | chr8.2:30509297-30509316 | None:intergenic | 50.0% | |
AGGTGGAAGACCACTTGGTT+TGG | + | chr8.2:30509120-30509139 | MS.gene037810:CDS | 50.0% | |
ATGTAGAGCCACCATTCACG+GGG | + | chr8.2:30510792-30510811 | MS.gene037810:intron | 50.0% | |
ATGTCCATGCTCCAGATGTC+CGG | + | chr8.2:30511161-30511180 | MS.gene037810:intron | 50.0% | |
CACAACCTTCTGCAAGGAAG+TGG | - | chr8.2:30510234-30510253 | None:intergenic | 50.0% | |
CATATTCATGGCATGGGTGC+CGG | - | chr8.2:30510416-30510435 | None:intergenic | 50.0% | |
CCTAATAGCAGGTGGTCCAA+CGG | - | chr8.2:30511114-30511133 | None:intergenic | 50.0% | |
CGAACACACAACCTTCTGCA+AGG | - | chr8.2:30510240-30510259 | None:intergenic | 50.0% | |
CGGGGTGGGATACTGAAAAA+TGG | + | chr8.2:30510810-30510829 | MS.gene037810:intron | 50.0% | |
CTTTGCACCAACACACACGT+TGG | + | chr8.2:30510188-30510207 | MS.gene037810:intron | 50.0% | |
GAACGGAGGAGTTATCACTG+TGG | + | chr8.2:30513480-30513499 | MS.gene037810:CDS | 50.0% | |
GATGTGTGTGGATGTGTGTG+GGG | + | chr8.2:30511512-30511531 | MS.gene037810:intron | 50.0% | |
GATTTCCCCAATGGCACCAA+TGG | - | chr8.2:30511483-30511502 | None:intergenic | 50.0% | |
GCAGACGCAGATAAGGTAAC+TGG | + | chr8.2:30509172-30509191 | MS.gene037810:intron | 50.0% | |
GCGCGAGAAACTCATAGGAT+GGG | + | chr8.2:30512656-30512675 | MS.gene037810:intron | 50.0% | |
GGCACCCATGCCATGAATAT+GGG | + | chr8.2:30510415-30510434 | MS.gene037810:intron | 50.0% | |
GGTGAGACTGCAACTCCATT+AGG | - | chr8.2:30512250-30512269 | None:intergenic | 50.0% | |
GTGTGTGTGATGTGTGTGTG+TGG | + | chr8.2:30511537-30511556 | MS.gene037810:intron | 50.0% | |
TCCCCCTTGACAAACAAACC+CGG | + | chr8.2:30508906-30508925 | MS.gene037810:CDS | 50.0% | |
TGTGTGATGTGTGTGTGTGG+TGG | + | chr8.2:30511540-30511559 | MS.gene037810:intron | 50.0% | |
! | ACCGGGTTTGTTTGTCAAGG+GGG | - | chr8.2:30508910-30508929 | None:intergenic | 50.0% |
! | CTCCAGAAAACTGGCTTCTG+AGG | - | chr8.2:30511038-30511057 | None:intergenic | 50.0% |
! | GACCGGGTTTGTTTGTCAAG+GGG | - | chr8.2:30508911-30508930 | None:intergenic | 50.0% |
! | GGACCGGGTTTGTTTGTCAA+GGG | - | chr8.2:30508912-30508931 | None:intergenic | 50.0% |
! | TAGCCTCAGCGGTTTTCTAC+CGG | + | chr8.2:30508858-30508877 | MS.gene037810:CDS | 50.0% |
! | TGAGACGGGACCTCTTTTTG+GGG | + | chr8.2:30511430-30511449 | MS.gene037810:intron | 50.0% |
! | TGGACCGGGTTTGTTTGTCA+AGG | - | chr8.2:30508913-30508932 | None:intergenic | 50.0% |
!! | AACACACACGTTGGCTCAGT+TGG | + | chr8.2:30510197-30510216 | MS.gene037810:intron | 50.0% |
!! | ACACGTTGGCTCAGTTGGTA+AGG | + | chr8.2:30510202-30510221 | MS.gene037810:intron | 50.0% |
!! | AGTTTAGGTTGGTTCGGCTC+CGG | - | chr8.2:30510362-30510381 | None:intergenic | 50.0% |
!! | ATGATGGACATGGGCAGTAC+TGG | + | chr8.2:30512835-30512854 | MS.gene037810:CDS | 50.0% |
!! | GCACTTTGGTGCCATAGCTT+TGG | - | chr8.2:30511592-30511611 | None:intergenic | 50.0% |
!! | GGGAAAACAACCGGTTCGAA+AGG | - | chr8.2:30508890-30508909 | None:intergenic | 50.0% |
!! | GGGGTTGATGTAGCACATGA+TGG | + | chr8.2:30512079-30512098 | MS.gene037810:CDS | 50.0% |
!! | GGTCCAAAGGGCACTTATAG+AGG | - | chr8.2:30510311-30510330 | None:intergenic | 50.0% |
!! | TTGGTGCCATTGGTGCCATT+GGG | + | chr8.2:30511474-30511493 | MS.gene037810:intron | 50.0% |
!! | TTTGGTGCCATTGGTGCCAT+TGG | + | chr8.2:30511473-30511492 | MS.gene037810:intron | 50.0% |
ACGGTCCACTTCCTTGCAGA+AGG | + | chr8.2:30510226-30510245 | MS.gene037810:intron | 55.0% | |
AGTTTCTCGCGCGCCCTATT+CGG | - | chr8.2:30512648-30512667 | None:intergenic | 55.0% | |
ATGCTCCAGATGTCCGGTTC+TGG | + | chr8.2:30511167-30511186 | MS.gene037810:intron | 55.0% | |
CAATTACTGTTCCAGCCCCC+AGG | + | chr8.2:30509283-30509302 | MS.gene037810:intron | 55.0% | |
CACCAACACTGCCCTCACAT+CGG | - | chr8.2:30510273-30510292 | None:intergenic | 55.0% | |
CCGTTGGACCACCTGCTATT+AGG | + | chr8.2:30511111-30511130 | MS.gene037810:intron | 55.0% | |
CGCGCGAGAAACTCATAGGA+TGG | + | chr8.2:30512655-30512674 | MS.gene037810:intron | 55.0% | |
CGGCACCCATGCCATGAATA+TGG | + | chr8.2:30510414-30510433 | MS.gene037810:intron | 55.0% | |
GATTCCCTCTGCCGATGTGA+GGG | + | chr8.2:30510259-30510278 | MS.gene037810:intron | 55.0% | |
TAAGTGCCCTTTGGACCCAG+AGG | + | chr8.2:30510314-30510333 | MS.gene037810:intron | 55.0% | |
TCAGTATCCCACCCCGTGAA+TGG | - | chr8.2:30510806-30510825 | None:intergenic | 55.0% | |
TGAAACGAGGGGCAGAAGAC+AGG | + | chr8.2:30511629-30511648 | MS.gene037810:intron | 55.0% | |
TGTTATCAGGCATGCCAGGG+AGG | - | chr8.2:30512809-30512828 | None:intergenic | 55.0% | |
! | AGAACCGGACATCTGGAGCA+TGG | - | chr8.2:30511168-30511187 | None:intergenic | 55.0% |
! | GGACATGGGCAGTACTGGAT+TGG | + | chr8.2:30512840-30512859 | MS.gene037810:CDS | 55.0% |
!! | AAGGAGCGGTTGTAGTGGAC+CGG | - | chr8.2:30508928-30508947 | None:intergenic | 55.0% |
!! | ATGTCCGGTTCTGGACGTGA+GGG | + | chr8.2:30511176-30511195 | MS.gene037810:intron | 55.0% |
!! | GATGTGAGGGCAGTGTTGGT+GGG | + | chr8.2:30510272-30510291 | MS.gene037810:intron | 55.0% |
!! | TGGTGCCATTGGTGCCATTG+GGG | + | chr8.2:30511475-30511494 | MS.gene037810:intron | 55.0% |
ACTGCCCTCACATCGGCAGA+GGG | - | chr8.2:30510266-30510285 | None:intergenic | 60.0% | |
AGAGCCACCATTCACGGGGT+GGG | + | chr8.2:30510796-30510815 | MS.gene037810:intron | 60.0% | |
AGGGCGCGCGAGAAACTCAT+AGG | + | chr8.2:30512651-30512670 | MS.gene037810:intron | 60.0% | |
CACGTCCAGAACCGGACATC+TGG | - | chr8.2:30511175-30511194 | None:intergenic | 60.0% | |
CATCCCCTCACGTCCAGAAC+CGG | - | chr8.2:30511183-30511202 | None:intergenic | 60.0% | |
CGATTCCCTCTGCCGATGTG+AGG | + | chr8.2:30510258-30510277 | MS.gene037810:intron | 60.0% | |
GAGCCGGTAGAAAACCGCTG+AGG | - | chr8.2:30508864-30508883 | None:intergenic | 60.0% | |
GAGCCTCCTCCAAGATCCGT+TGG | + | chr8.2:30511095-30511114 | MS.gene037810:intron | 60.0% | |
GCAGGTGGTCCAACGGATCT+TGG | - | chr8.2:30511107-30511126 | None:intergenic | 60.0% | |
GGTCCAACGGATCTTGGAGG+AGG | - | chr8.2:30511101-30511120 | None:intergenic | 60.0% | |
GGTGGTCCAACGGATCTTGG+AGG | - | chr8.2:30511104-30511123 | None:intergenic | 60.0% | |
GTATCCCACCCCGTGAATGG+TGG | - | chr8.2:30510803-30510822 | None:intergenic | 60.0% | |
TAGAGCCACCATTCACGGGG+TGG | + | chr8.2:30510795-30510814 | MS.gene037810:intron | 60.0% | |
TCCGGTCATCACCAGGGTCA+GGG | - | chr8.2:30510344-30510363 | None:intergenic | 60.0% | |
TGCCGATGTGAGGGCAGTGT+TGG | + | chr8.2:30510268-30510287 | MS.gene037810:intron | 60.0% | |
TTCGGCTCCGGTCATCACCA+GGG | - | chr8.2:30510350-30510369 | None:intergenic | 60.0% | |
! | CGATGTGAGGGCAGTGTTGG+TGG | + | chr8.2:30510271-30510290 | MS.gene037810:intron | 60.0% |
!! | AGGAGCGGTTGTAGTGGACC+GGG | - | chr8.2:30508927-30508946 | None:intergenic | 60.0% |
!! | GATGTCCGGTTCTGGACGTG+AGG | + | chr8.2:30511175-30511194 | MS.gene037810:intron | 60.0% |
!! | TGTCCGGTTCTGGACGTGAG+GGG | + | chr8.2:30511177-30511196 | MS.gene037810:intron | 60.0% |
CACTGCCCTCACATCGGCAG+AGG | - | chr8.2:30510267-30510286 | None:intergenic | 65.0% | |
CTCCGGTCATCACCAGGGTC+AGG | - | chr8.2:30510345-30510364 | None:intergenic | 65.0% | |
GGCACGCCTCTGGGTCCAAA+GGG | - | chr8.2:30510323-30510342 | None:intergenic | 65.0% | |
GTTCGGCTCCGGTCATCACC+AGG | - | chr8.2:30510351-30510370 | None:intergenic | 65.0% | |
! | CCGGCTCGACCCTTTCGAAC+CGG | + | chr8.2:30508877-30508896 | MS.gene037810:CDS | 65.0% |
! | CCGGTTCGAAAGGGTCGAGC+CGG | - | chr8.2:30508880-30508899 | None:intergenic | 65.0% |
! | GCCCTGACCCTGGTGATGAC+CGG | + | chr8.2:30510340-30510359 | MS.gene037810:intron | 65.0% |
CAGGGTCAGGGCACGCCTCT+GGG | - | chr8.2:30510332-30510351 | None:intergenic | 70.0% | |
GGGCACGCCTCTGGGTCCAA+AGG | - | chr8.2:30510324-30510343 | None:intergenic | 70.0% | |
CCAGGGTCAGGGCACGCCTC+TGG | - | chr8.2:30510333-30510352 | None:intergenic | 75.0% | |
! | CCAGAGGCGTGCCCTGACCC+TGG | + | chr8.2:30510330-30510349 | MS.gene037810:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 30508767 | 30513657 | 30508767 | ID=MS.gene037810 |
chr8.2 | mRNA | 30508767 | 30513657 | 30508767 | ID=MS.gene037810.t1;Parent=MS.gene037810 |
chr8.2 | exon | 30508767 | 30509186 | 30508767 | ID=MS.gene037810.t1.exon1;Parent=MS.gene037810.t1 |
chr8.2 | CDS | 30508767 | 30509186 | 30508767 | ID=cds.MS.gene037810.t1;Parent=MS.gene037810.t1 |
chr8.2 | exon | 30511998 | 30512305 | 30511998 | ID=MS.gene037810.t1.exon2;Parent=MS.gene037810.t1 |
chr8.2 | CDS | 30511998 | 30512305 | 30511998 | ID=cds.MS.gene037810.t1;Parent=MS.gene037810.t1 |
chr8.2 | exon | 30512743 | 30512872 | 30512743 | ID=MS.gene037810.t1.exon3;Parent=MS.gene037810.t1 |
chr8.2 | CDS | 30512743 | 30512872 | 30512743 | ID=cds.MS.gene037810.t1;Parent=MS.gene037810.t1 |
chr8.2 | exon | 30513382 | 30513657 | 30513382 | ID=MS.gene037810.t1.exon4;Parent=MS.gene037810.t1 |
chr8.2 | CDS | 30513382 | 30513657 | 30513382 | ID=cds.MS.gene037810.t1;Parent=MS.gene037810.t1 |
Gene Sequence |
Protein sequence |