AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene037810


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene037810.t1 MTR_8g074270 92.042 377 28 1 1 377 1 375 0.0 713
MS.gene037810.t1 MTR_8g074170 89.125 377 39 1 1 377 1 375 0.0 690
MS.gene037810.t1 MTR_8g074210 86.737 377 48 1 1 377 1 375 0.0 668
MS.gene037810.t1 MTR_1g075865 96.262 107 4 0 169 275 7 113 8.70e-72 220
MS.gene037810.t1 MTR_8g074320 56.436 202 67 3 47 243 37 222 1.12e-69 218
MS.gene037810.t1 MTR_2g042370 32.958 355 223 10 24 369 10 358 6.05e-56 187
MS.gene037810.t1 MTR_2g042430 33.623 345 215 10 29 366 29 366 2.35e-55 186
MS.gene037810.t1 MTR_2g042420 32.394 355 221 12 24 369 6 350 1.03e-52 179
MS.gene037810.t1 MTR_4g050190 31.008 387 222 10 19 363 3 386 1.88e-43 155
MS.gene037810.t1 MTR_2g099030 32.381 315 168 7 62 331 62 376 2.20e-41 150
MS.gene037810.t1 MTR_2g087780 31.481 378 216 12 29 363 13 390 4.16e-41 149
MS.gene037810.t1 MTR_7g090300 32.915 319 172 10 80 363 53 364 2.29e-39 144
MS.gene037810.t1 MTR_7g490330 35.938 256 139 6 80 310 47 302 6.34e-39 142
MS.gene037810.t1 MTR_7g090320 31.003 329 186 7 80 367 58 386 1.36e-38 142
MS.gene037810.t1 MTR_7g490350 30.239 377 201 12 25 363 12 364 2.63e-38 141
MS.gene037810.t1 MTR_7g090310 30.631 333 191 7 75 367 53 385 8.86e-38 140
MS.gene037810.t1 MTR_5g091980 36.957 230 122 7 80 287 48 276 1.01e-33 127
MS.gene037810.t1 MTR_8g074290 53.211 109 47 3 245 351 46 152 3.87e-33 121
MS.gene037810.t1 MTR_4g112670 33.891 239 134 5 80 294 39 277 1.27e-30 119
MS.gene037810.t1 MTR_4g112650 34.043 235 129 5 78 286 36 270 8.07e-30 117
MS.gene037810.t1 MTR_2g058450 32.068 237 136 4 78 289 38 274 4.07e-29 115
MS.gene037810.t1 MTR_4g112630 33.898 236 129 7 78 286 36 271 3.66e-27 110
MS.gene037810.t1 MTR_0003s0530 39.535 129 77 1 167 294 4 132 2.85e-24 99.4
MS.gene037810.t1 MTR_2g058410 33.918 171 107 5 123 288 1 170 4.84e-22 94.0
MS.gene037810.t1 MTR_8g075500 78.431 51 11 0 94 144 170 220 1.11e-19 87.0
MS.gene037810.t1 MTR_4g112840 37.000 100 63 0 197 296 63 162 8.13e-16 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene037810.t1 AT3G51430 49.444 360 170 7 22 373 11 366 5.53e-119 350
MS.gene037810.t1 AT3G51450 49.025 359 171 7 23 373 12 366 2.47e-117 345
MS.gene037810.t1 AT3G51430 49.444 360 168 8 22 373 11 364 3.14e-117 345
MS.gene037810.t1 AT3G51420 48.611 360 173 7 22 373 11 366 2.59e-116 343
MS.gene037810.t1 AT3G51440 48.611 360 173 7 22 373 11 366 1.18e-115 341
MS.gene037810.t1 AT3G59530 32.602 319 174 7 26 304 19 336 1.77e-45 161
MS.gene037810.t1 AT3G59530 32.602 319 174 7 26 304 19 336 1.77e-45 161
MS.gene037810.t1 AT3G59530 32.602 319 174 7 26 304 19 336 1.77e-45 161
MS.gene037810.t1 AT1G08470 30.000 390 226 9 23 368 3 389 7.37e-45 159
MS.gene037810.t1 AT5G22020 32.099 324 188 7 77 368 72 395 3.52e-43 155
MS.gene037810.t1 AT5G22020 32.099 324 188 7 77 368 72 395 3.52e-43 155
MS.gene037810.t1 AT5G22020 32.099 324 188 7 77 368 72 395 3.52e-43 155
MS.gene037810.t1 AT3G57030 30.530 321 179 11 80 363 56 369 3.06e-35 133
MS.gene037810.t1 AT3G57020 28.803 309 192 9 80 367 53 354 1.18e-29 117
MS.gene037810.t1 AT3G57020 30.147 272 163 8 116 367 104 368 1.72e-29 117
MS.gene037810.t1 AT2G41290 29.878 328 181 10 79 363 50 371 2.72e-29 117
MS.gene037810.t1 AT3G57010 28.097 331 194 9 80 374 54 376 8.84e-28 112
MS.gene037810.t1 AT2G41300 31.651 218 142 5 120 331 133 349 1.79e-27 112
MS.gene037810.t1 AT1G74020 29.524 315 175 11 80 370 38 329 5.29e-27 110
MS.gene037810.t1 AT1G74010 33.186 226 127 7 80 282 37 261 1.58e-26 108
MS.gene037810.t1 AT1G74000 30.233 258 155 6 76 308 36 293 8.74e-23 98.2

Find 86 sgRNAs with CRISPR-Local

Find 355 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCAGTGGTCAATGAAAATT+TGG 0.096368 8.2:-30513539 None:intergenic
AGAATCCTTGATTGAGTATT+TGG 0.126660 8.2:-30512128 None:intergenic
CCCTTTCATTAGGAAGGTTC+TGG 0.311857 8.2:+30513417 MS.gene037810:CDS
ACCGCTGAGGCTATAATAAC+TGG 0.316840 8.2:-30508848 None:intergenic
GTTGTTGTCGTTTAAATTGT+AGG 0.326066 8.2:-30513646 None:intergenic
TATGACAAAAGGGTATAAAA+TGG 0.328459 8.2:-30513593 None:intergenic
TAGCTCAGAAATCTACCATT+AGG 0.351349 8.2:-30512175 None:intergenic
TTGACCACTGGGATTAAGAT+TGG 0.354361 8.2:+30513550 MS.gene037810:CDS
CCATCATAATGAATGTTATC+AGG 0.354766 8.2:-30512819 None:intergenic
CGTAACAACAACATGAGATT+AGG 0.361874 8.2:+30508950 MS.gene037810:CDS
TTGAGCATTATGTCCAGTTC+AGG 0.364269 8.2:-30513391 None:intergenic
GGATCATAGTAATGTGTTGT+AGG 0.364483 8.2:-30513517 None:intergenic
GTTTGCCTTCTAATATATCT+AGG 0.365632 8.2:-30512153 None:intergenic
TGCTCAAATACCCTTTCATT+AGG 0.379431 8.2:+30513407 MS.gene037810:CDS
GGTGAGACTGCAACTCCATT+AGG 0.393741 8.2:-30512247 None:intergenic
ATGAATCGGTCGTTGAAGAT+TGG 0.395480 8.2:+30509089 MS.gene037810:CDS
GCATCGTATACCAAATCTTC+AGG 0.400939 8.2:-30509007 None:intergenic
TGAATCGGTCGTTGAAGATT+GGG 0.412828 8.2:+30509090 MS.gene037810:CDS
TTTGGTATACGATGCTGATA+AGG 0.423096 8.2:+30509015 MS.gene037810:CDS
ATACGATGCTGATAAGGGTT+TGG 0.425897 8.2:+30509021 MS.gene037810:CDS
AGTAGAGGTCACTCACTAGT+AGG 0.439456 8.2:-30512222 None:intergenic
ATGTCAAGACGTATGACAAA+AGG 0.440499 8.2:-30513604 None:intergenic
AGTGACCTCTACTTTCCTAA+TGG 0.443237 8.2:+30512232 MS.gene037810:CDS
ATGATGGACATGGGCAGTAC+TGG 0.444773 8.2:+30512835 MS.gene037810:CDS
TGAATGTTATCAGGCATGCC+AGG 0.449090 8.2:-30512810 None:intergenic
AGGTGGAAGACCACTTGGTT+TGG 0.461808 8.2:+30509120 MS.gene037810:CDS
TGACCACTGGGATTAAGATT+GGG 0.462512 8.2:+30513551 MS.gene037810:CDS
CCGGCTCGACCCTTTCGAAC+CGG 0.467052 8.2:+30508877 MS.gene037810:CDS
TTGGTATACGATGCTGATAA+GGG 0.469023 8.2:+30509016 MS.gene037810:CDS
AGGAGTTATCACTGTGGACT+TGG 0.473224 8.2:+30513486 MS.gene037810:CDS
GTTTATACTAGTTGTGAAGA+TGG 0.473616 8.2:+30509043 MS.gene037810:CDS
CCTGATAACATTCATTATGA+TGG 0.474172 8.2:+30512819 MS.gene037810:CDS
CAAATACCCTTTCATTAGGA+AGG 0.478049 8.2:+30513411 MS.gene037810:CDS
CTCATGTTGTTGTTACGTAA+AGG 0.483895 8.2:-30508944 None:intergenic
GTTTAAATTGTAGGTAGAGC+AGG 0.497425 8.2:-30513637 None:intergenic
GCCAGAACCTTCCTAATGAA+AGG 0.497938 8.2:-30513418 None:intergenic
ATACTAGTTGTGAAGATGGA+TGG 0.502195 8.2:+30509047 MS.gene037810:CDS
CCAGTGGTCAATGAAAATTT+GGG 0.505659 8.2:-30513538 None:intergenic
GGACATGGGCAGTACTGGAT+TGG 0.509242 8.2:+30512840 MS.gene037810:CDS
AACACAGGTGGAAGACCACT+TGG 0.510446 8.2:+30509115 MS.gene037810:CDS
TATTGTTGCAGACGCAGATA+AGG 0.512214 8.2:+30509165 MS.gene037810:CDS
TCTGTCCTAGATATATTAGA+AGG 0.514052 8.2:+30512148 MS.gene037810:CDS
TGGACCGGGTTTGTTTGTCA+AGG 0.516186 8.2:-30508910 None:intergenic
ATATTAGAAGGCAAACCTAA+TGG 0.516846 8.2:+30512160 MS.gene037810:CDS
TTCATCCAAATACTCAATCA+AGG 0.517336 8.2:+30512123 MS.gene037810:CDS
GGGAAAACAACCGGTTCGAA+AGG 0.518289 8.2:-30508887 None:intergenic
AAGGAGCGGTTGTAGTGGAC+CGG 0.518593 8.2:-30508925 None:intergenic
CCAGAACCTTCCTAATGAAA+GGG 0.523065 8.2:-30513417 None:intergenic
CTAATATTCAAAATAACAGA+TGG 0.527880 8.2:+30512058 MS.gene037810:CDS
GGACCGGGTTTGTTTGTCAA+GGG 0.528291 8.2:-30508909 None:intergenic
TGTCAAGACGTATGACAAAA+GGG 0.530568 8.2:-30513603 None:intergenic
TAATATTCAAAATAACAGAT+GGG 0.530673 8.2:+30512059 MS.gene037810:CDS
GTACTTGTGACTGAGATTGA+TGG 0.533589 8.2:+30512034 MS.gene037810:CDS
GAGAATCACAGTGAATGAAT+CGG 0.546567 8.2:+30509075 MS.gene037810:CDS
GGAAAACAACCGGTTCGAAA+GGG 0.552856 8.2:-30508886 None:intergenic
AGTCTGAATTTGTCAAAGAA+CGG 0.559155 8.2:+30513463 MS.gene037810:CDS
TAATGGAGTTGCAGTCTCAC+CGG 0.564848 8.2:+30512249 MS.gene037810:CDS
CCGGTTCGAAAGGGTCGAGC+CGG 0.565326 8.2:-30508877 None:intergenic
GTTATCACTGTGGACTTGGA+AGG 0.570869 8.2:+30513490 MS.gene037810:CDS
GTAGAGGTCACTCACTAGTA+GGG 0.571038 8.2:-30512221 None:intergenic
ATTGGGAATCACATGTATTG+TGG 0.573834 8.2:+30513568 MS.gene037810:CDS
TGCAAGAAATATTACATACA+TGG 0.578745 8.2:+30512750 MS.gene037810:CDS
AGGAGCGGTTGTAGTGGACC+GGG 0.583921 8.2:-30508924 None:intergenic
ACGTAAAGGAGCGGTTGTAG+TGG 0.584948 8.2:-30508930 None:intergenic
GAATGTTATCAGGCATGCCA+GGG 0.588881 8.2:-30512809 None:intergenic
CCCAGTTATTATAGCCTCAG+CGG 0.590689 8.2:+30508847 MS.gene037810:CDS
CCGCTGAGGCTATAATAACT+GGG 0.592910 8.2:-30508847 None:intergenic
AACATTCATTATGATGGACA+TGG 0.593918 8.2:+30512825 MS.gene037810:CDS
ACCGGGTTTGTTTGTCAAGG+GGG 0.602489 8.2:-30508907 None:intergenic
GACCGGGTTTGTTTGTCAAG+GGG 0.603502 8.2:-30508908 None:intergenic
AATATTCAAAATAACAGATG+GGG 0.627610 8.2:+30512060 MS.gene037810:CDS
TGAGTATTTGGATGAAGCGT+CGG 0.631980 8.2:-30512116 None:intergenic
GAAGATTGGGTTAACACAGG+TGG 0.640222 8.2:+30509103 MS.gene037810:CDS
ACATTCATTATGATGGACAT+GGG 0.648960 8.2:+30512826 MS.gene037810:CDS
CAACTCCATTAGGAAAGTAG+AGG 0.650316 8.2:-30512237 None:intergenic
GTTGAAGATTGGGTTAACAC+AGG 0.650731 8.2:+30509100 MS.gene037810:CDS
GGGAGAATTATAGCTATGAA+CGG 0.651872 8.2:-30508827 None:intergenic
CTGAATTTGTCAAAGAACGG+AGG 0.657045 8.2:+30513466 MS.gene037810:CDS
GTTGTTGTTACGTAAAGGAG+CGG 0.658381 8.2:-30508939 None:intergenic
GGGGTTGATGTAGCACATGA+TGG 0.659959 8.2:+30512079 MS.gene037810:CDS
CCATCAAAAGCCAAACCAAG+TGG 0.660290 8.2:-30509130 None:intergenic
GTACTGGATTGGAATAGCCA+CGG 0.683691 8.2:+30512851 MS.gene037810:CDS
TGTTATCAGGCATGCCAGGG+AGG 0.693601 8.2:-30512806 None:intergenic
ATTCCCAATCTTAATCCCAG+TGG 0.699708 8.2:-30513554 None:intergenic
GAGCCGGTAGAAAACCGCTG+AGG 0.774766 8.2:-30508861 None:intergenic
GAACGGAGGAGTTATCACTG+TGG 0.783679 8.2:+30513480 MS.gene037810:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATACATTATTATTTATTTAG+TGG + chr8.2:30511907-30511926 MS.gene037810:intron 10.0%
!! TACATTATTATTTATTTAGT+GGG + chr8.2:30511908-30511927 MS.gene037810:intron 10.0%
!!! CTAAATTTTTTCTTTTTTTA+AGG + chr8.2:30509245-30509264 MS.gene037810:intron 10.0%
!!! TTTCATTTTTATTAACTTTT+GGG - chr8.2:30511667-30511686 None:intergenic 10.0%
!! CATTTAATTAATTATGTATG+TGG + chr8.2:30510534-30510553 MS.gene037810:intron 15.0%
!! TAATATTCAAAATAACAGAT+GGG + chr8.2:30512059-30512078 MS.gene037810:CDS 15.0%
!!! AAAATATTTGATGACTTTAA+GGG - chr8.2:30509571-30509590 None:intergenic 15.0%
!!! AAATCAATGGTTTTTTTTTT+TGG - chr8.2:30509346-30509365 None:intergenic 15.0%
!!! AGAGTTATATAATTTTTTTC+CGG + chr8.2:30509893-30509912 MS.gene037810:intron 15.0%
!!! AGATTTTAAGAAAAAATCAA+TGG - chr8.2:30509359-30509378 None:intergenic 15.0%
!!! ATATATTTTTTTTGTACAAC+CGG - chr8.2:30509915-30509934 None:intergenic 15.0%
!!! CTTTCATTTTTATTAACTTT+TGG - chr8.2:30511668-30511687 None:intergenic 15.0%
!!! GTTACATTATCATTTTTTTT+TGG + chr8.2:30511857-30511876 MS.gene037810:intron 15.0%
!!! TGGACTTATTTTTATTTTAT+GGG + chr8.2:30512708-30512727 MS.gene037810:intron 15.0%
!!! TTCATTTTTATTAACTTTTG+GGG - chr8.2:30511666-30511685 None:intergenic 15.0%
!!! TTGGACTTATTTTTATTTTA+TGG + chr8.2:30512707-30512726 MS.gene037810:intron 15.0%
!!! TTTTAAGGTAAAAAAAGTTA+AGG + chr8.2:30509260-30509279 MS.gene037810:intron 15.0%
!!! TTTTCTTAAAATCTAAGAAT+AGG + chr8.2:30509365-30509384 MS.gene037810:intron 15.0%
!! AAAATATGTAGAATTGTTGT+AGG - chr8.2:30509504-30509523 None:intergenic 20.0%
!! AATAAATTTCCATCAAACTA+AGG + chr8.2:30512445-30512464 MS.gene037810:intron 20.0%
!! AATATTCAAAATAACAGATG+GGG + chr8.2:30512060-30512079 MS.gene037810:CDS 20.0%
!! ATAAATTTCCATCAAACTAA+GGG + chr8.2:30512446-30512465 MS.gene037810:intron 20.0%
!! ATAATAAACATGTCATATGT+CGG - chr8.2:30510090-30510109 None:intergenic 20.0%
!! ATATAATATGAGTTTGAAGA+TGG + chr8.2:30509453-30509472 MS.gene037810:intron 20.0%
!! ATATATAAATTAGAGTGCAA+TGG + chr8.2:30509929-30509948 MS.gene037810:intron 20.0%
!! CATTTATTAAATGATGTATG+TGG - chr8.2:30510573-30510592 None:intergenic 20.0%
!! CTAATATTCAAAATAACAGA+TGG + chr8.2:30512058-30512077 MS.gene037810:CDS 20.0%
!! TAAAAAACAGAAAATTGAGA+CGG + chr8.2:30511415-30511434 MS.gene037810:intron 20.0%
!! TATATAATCGAAACTACATA+GGG - chr8.2:30512560-30512579 None:intergenic 20.0%
!! TTATATAATCGAAACTACAT+AGG - chr8.2:30512561-30512580 None:intergenic 20.0%
!!! AAAAGTGCTAATTATATGTT+GGG + chr8.2:30513116-30513135 MS.gene037810:intron 20.0%
!!! AACGTGTTTTTTAAGTTTTA+TGG - chr8.2:30512603-30512622 None:intergenic 20.0%
!!! ACAATTCTACATATTTTGAT+TGG + chr8.2:30509507-30509526 MS.gene037810:intron 20.0%
!!! ACGTGTTTTTTAAGTTTTAT+GGG - chr8.2:30512602-30512621 None:intergenic 20.0%
!!! ATTTTAATATGTTCGTTTGA+GGG - chr8.2:30509407-30509426 None:intergenic 20.0%
!!! CAAAATATTTGATGACTTTA+AGG - chr8.2:30509572-30509591 None:intergenic 20.0%
!!! CAAATACCTATATTTTTAGT+TGG - chr8.2:30509735-30509754 None:intergenic 20.0%
!!! CATCTGTTATTTTGAATATT+AGG - chr8.2:30512060-30512079 None:intergenic 20.0%
!!! TATTTTAATATGTTCGTTTG+AGG - chr8.2:30509408-30509427 None:intergenic 20.0%
!!! TTTTGGTTACATAAAAGTTT+AGG - chr8.2:30510377-30510396 None:intergenic 20.0%
! AAAAAACAGAAAATTGAGAC+GGG + chr8.2:30511416-30511435 MS.gene037810:intron 25.0%
! AAAAATAATTTGGACTGTCA+CGG - chr8.2:30510772-30510791 None:intergenic 25.0%
! AAATATGTGACATCCAATTT+AGG + chr8.2:30513062-30513081 MS.gene037810:intron 25.0%
! AATTAGATTAGTGAATGAGT+GGG - chr8.2:30511955-30511974 None:intergenic 25.0%
! ACACGATAACAAAATTTGAT+TGG - chr8.2:30509989-30510008 None:intergenic 25.0%
! AGAAAAACTAAAACAATCCT+GGG - chr8.2:30509303-30509322 None:intergenic 25.0%
! AGATTAATCTCTACAATTGT+GGG + chr8.2:30512976-30512995 MS.gene037810:intron 25.0%
! ATGAGTTACCAATACATATA+AGG - chr8.2:30513323-30513342 None:intergenic 25.0%
! ATGCATCCAACTAAAAATAT+AGG + chr8.2:30509726-30509745 MS.gene037810:intron 25.0%
! ATTAATCAATGATATGCTAC+AGG + chr8.2:30511976-30511995 MS.gene037810:intron 25.0%
! CACAATGTGTTTATAAATAG+GGG + chr8.2:30511234-30511253 MS.gene037810:intron 25.0%
! CTATAACATAAATTTCTGCA+TGG - chr8.2:30510733-30510752 None:intergenic 25.0%
! GCACAATGTGTTTATAAATA+GGG + chr8.2:30511233-30511252 MS.gene037810:intron 25.0%
! GGCTCTACATAAAAATAATT+TGG - chr8.2:30510782-30510801 None:intergenic 25.0%
! TAAATTTCCATCAAACTAAG+GGG + chr8.2:30512447-30512466 MS.gene037810:intron 25.0%
! TAATTAGATTAGTGAATGAG+TGG - chr8.2:30511956-30511975 None:intergenic 25.0%
! TAGAAAAACTAAAACAATCC+TGG - chr8.2:30509304-30509323 None:intergenic 25.0%
! TGAGTTACCAATACATATAA+GGG - chr8.2:30513322-30513341 None:intergenic 25.0%
! TGCATTTGTAGAAATATTCA+CGG - chr8.2:30509711-30509730 None:intergenic 25.0%
! TGTAGTTTCGATTATATAAC+CGG + chr8.2:30512562-30512581 MS.gene037810:intron 25.0%
! TTAATCAATGATATGCTACA+GGG + chr8.2:30511977-30511996 MS.gene037810:intron 25.0%
!! AACAATCGACAATGATATTT+TGG - chr8.2:30511780-30511799 None:intergenic 25.0%
!! AATTGGATGTCACATATTTT+TGG - chr8.2:30513061-30513080 None:intergenic 25.0%
!! AGAAAACAGTAGGATTTTAT+TGG + chr8.2:30510875-30510894 MS.gene037810:intron 25.0%
!! CTGACAATTTGTTTATAAGT+GGG + chr8.2:30511001-30511020 MS.gene037810:intron 25.0%
!! CTTTTATACTTGTACTAACA+AGG - chr8.2:30512324-30512343 None:intergenic 25.0%
!! GAAAACAGTAGGATTTTATT+GGG + chr8.2:30510876-30510895 MS.gene037810:intron 25.0%
!! TATGACAAAAGGGTATAAAA+TGG - chr8.2:30513596-30513615 None:intergenic 25.0%
!! TCTGACAATTTGTTTATAAG+TGG + chr8.2:30511000-30511019 MS.gene037810:intron 25.0%
!! TGACAATTTGTTTATAAGTG+GGG + chr8.2:30511002-30511021 MS.gene037810:intron 25.0%
!! TTTTAATATGTTCGTTTGAG+GGG - chr8.2:30509406-30509425 None:intergenic 25.0%
!! TTTTCTGTTCATTGTACAAA+TGG - chr8.2:30513100-30513119 None:intergenic 25.0%
!! TTTTTGCTTATAATAGTGAC+TGG + chr8.2:30510608-30510627 MS.gene037810:intron 25.0%
!!! ATTTTGGAGTAGTAACTATT+TGG - chr8.2:30511740-30511759 None:intergenic 25.0%
!!! CGTGTTTTTTAAGTTTTATG+GGG - chr8.2:30512601-30512620 None:intergenic 25.0%
!!! GAAAAGTGCTAATTATATGT+TGG + chr8.2:30513115-30513134 MS.gene037810:intron 25.0%
!!! TAATCATACATGAGGTATTT+TGG - chr8.2:30511756-30511775 None:intergenic 25.0%
!!! TCCAATTTAGGTTTTTCTTA+AGG + chr8.2:30513074-30513093 MS.gene037810:intron 25.0%
!!! TTGAATGTTTTTTCTGCAAA+TGG + chr8.2:30509215-30509234 MS.gene037810:intron 25.0%
!!! TTTTTAATTCACGATGCATT+CGG - chr8.2:30510938-30510957 None:intergenic 25.0%
!!! TTTTTGTTTATAACAGTGAC+CGG - chr8.2:30510503-30510522 None:intergenic 25.0%
!!! TTTTTTTTTGGTCAAGTCAA+TGG - chr8.2:30509334-30509353 None:intergenic 25.0%
AAAAAAACTAACTTTGCAGC+CGG + chr8.2:30510394-30510413 MS.gene037810:intron 30.0%
AAAAACTAAAACAATCCTGG+GGG - chr8.2:30509301-30509320 None:intergenic 30.0%
AAATGACTTGAGAAAACAGT+AGG + chr8.2:30510865-30510884 MS.gene037810:intron 30.0%
AAGGTGATAAACAACTTACA+TGG - chr8.2:30512305-30512324 None:intergenic 30.0%
AGAATCCTTGATTGAGTATT+TGG - chr8.2:30512131-30512150 None:intergenic 30.0%
AGTCTGAATTTGTCAAAGAA+CGG + chr8.2:30513463-30513482 MS.gene037810:CDS 30.0%
ATATTAGAAGGCAAACCTAA+TGG + chr8.2:30512160-30512179 MS.gene037810:CDS 30.0%
CAATGTTAAGAGTTTCACAT+CGG + chr8.2:30510966-30510985 MS.gene037810:intron 30.0%
CCATCATAATGAATGTTATC+AGG - chr8.2:30512822-30512841 None:intergenic 30.0%
CCTGATAACATTCATTATGA+TGG + chr8.2:30512819-30512838 MS.gene037810:CDS 30.0%
GAAAAACTAAAACAATCCTG+GGG - chr8.2:30509302-30509321 None:intergenic 30.0%
GAGATTAATCTCTACAATTG+TGG + chr8.2:30512975-30512994 MS.gene037810:intron 30.0%
GCCTTAAGAAAAACCTAAAT+TGG - chr8.2:30513078-30513097 None:intergenic 30.0%
GGCACAATGTGTTTATAAAT+AGG + chr8.2:30511232-30511251 MS.gene037810:intron 30.0%
GGTTACATAAAAGTTTAGGT+TGG - chr8.2:30510373-30510392 None:intergenic 30.0%
GTTTATACTAGTTGTGAAGA+TGG + chr8.2:30509043-30509062 MS.gene037810:CDS 30.0%
GTTTGCCTTCTAATATATCT+AGG - chr8.2:30512156-30512175 None:intergenic 30.0%
TAATATGAGTTTGAAGATGG+TGG + chr8.2:30509456-30509475 MS.gene037810:intron 30.0%
TCAAGTATTTCCCATATTCA+TGG - chr8.2:30510428-30510447 None:intergenic 30.0%
TCTGTCCTAGATATATTAGA+AGG + chr8.2:30512148-30512167 MS.gene037810:CDS 30.0%
TCTTTCTTGCGTTAAATCAT+TGG + chr8.2:30511819-30511838 MS.gene037810:intron 30.0%
TTCATCCAAATACTCAATCA+AGG + chr8.2:30512123-30512142 MS.gene037810:CDS 30.0%
! ATACTTCCATGACATAGTTT+TGG + chr8.2:30511455-30511474 MS.gene037810:intron 30.0%
! ATTTTATGGGATAATGTTGC+AGG + chr8.2:30512721-30512740 MS.gene037810:intron 30.0%
! GACAATTTGTTTATAAGTGG+GGG + chr8.2:30511003-30511022 MS.gene037810:intron 30.0%
! GGTGTGCTTTATTGAAATTT+GGG + chr8.2:30512468-30512487 MS.gene037810:intron 30.0%
! TTAGAAGTATGCAAGTAACA+TGG - chr8.2:30512500-30512519 None:intergenic 30.0%
! TTTTCTGTGCTACCTTTTTT+TGG - chr8.2:30512777-30512796 None:intergenic 30.0%
!! AACATTCATTATGATGGACA+TGG + chr8.2:30512825-30512844 MS.gene037810:CDS 30.0%
!! AAGACGACAAAATTTTGATC+CGG - chr8.2:30512271-30512290 None:intergenic 30.0%
!! ACATTCATTATGATGGACAT+GGG + chr8.2:30512826-30512845 MS.gene037810:CDS 30.0%
!! CATAAAAGTTTAGGTTGGTT+CGG - chr8.2:30510368-30510387 None:intergenic 30.0%
!! TTTTAATTCACGATGCATTC+GGG - chr8.2:30510937-30510956 None:intergenic 30.0%
!!! AAAGTGCTACTCCTTTTTTT+GGG + chr8.2:30511605-30511624 MS.gene037810:intron 30.0%
!!! ATTTTGGCTAATCATACATG+AGG - chr8.2:30511764-30511783 None:intergenic 30.0%
!!! CAGATTTTAGAATCCGAATA+GGG + chr8.2:30512632-30512651 MS.gene037810:intron 30.0%
!!! GCTGCAAAGTTAGTTTTTTT+TGG - chr8.2:30510394-30510413 None:intergenic 30.0%
!!! TCAGATTTTAGAATCCGAAT+AGG + chr8.2:30512631-30512650 MS.gene037810:intron 30.0%
!!! TTCAAGACTTTGTTTTTCGA+CGG - chr8.2:30509661-30509680 None:intergenic 30.0%
!!! TTTCTGTGCTACCTTTTTTT+GGG - chr8.2:30512776-30512795 None:intergenic 30.0%
ACCACTTAGAAATTGTGGTT+GGG - chr8.2:30511071-30511090 None:intergenic 35.0%
ACGCTAACATGTGTCTATAA+AGG - chr8.2:30513297-30513316 None:intergenic 35.0%
AGCGTTTCCCTTATATGTAT+TGG + chr8.2:30513312-30513331 MS.gene037810:intron 35.0%
ATACTAGTTGTGAAGATGGA+TGG + chr8.2:30509047-30509066 MS.gene037810:CDS 35.0%
ATCTCACATCGAATATGAGA+TGG + chr8.2:30511211-30511230 MS.gene037810:intron 35.0%
ATGTCAAGACGTATGACAAA+AGG - chr8.2:30513607-30513626 None:intergenic 35.0%
ATGTCATATGTCGGAAAATG+TGG - chr8.2:30510081-30510100 None:intergenic 35.0%
ATTGGGAATCACATGTATTG+TGG + chr8.2:30513568-30513587 MS.gene037810:CDS 35.0%
ATTTCCCATATTCATGGCAT+GGG - chr8.2:30510422-30510441 None:intergenic 35.0%
CAAAAAAAGGAGTAGCACTT+TGG - chr8.2:30511606-30511625 None:intergenic 35.0%
CAAATACCCTTTCATTAGGA+AGG + chr8.2:30513411-30513430 MS.gene037810:CDS 35.0%
CCAGTGGTCAATGAAAATTT+GGG - chr8.2:30513541-30513560 None:intergenic 35.0%
CGTAACAACAACATGAGATT+AGG + chr8.2:30508950-30508969 MS.gene037810:CDS 35.0%
CTGATACCACTTAGAAATTG+TGG - chr8.2:30511076-30511095 None:intergenic 35.0%
GACCTACTTCTAAATGTTGT+TGG + chr8.2:30512688-30512707 MS.gene037810:intron 35.0%
GAGAATCACAGTGAATGAAT+CGG + chr8.2:30509075-30509094 MS.gene037810:CDS 35.0%
GGATCATAGTAATGTGTTGT+AGG - chr8.2:30513520-30513539 None:intergenic 35.0%
GGGAGAATTATAGCTATGAA+CGG - chr8.2:30508830-30508849 None:intergenic 35.0%
GTCCAACAACATTTAGAAGT+AGG - chr8.2:30512693-30512712 None:intergenic 35.0%
GTGATAAACAACTTACATGG+AGG - chr8.2:30512302-30512321 None:intergenic 35.0%
GTTTGTGTATTTCTTCTGTC+AGG + chr8.2:30513360-30513379 MS.gene037810:intron 35.0%
TACCACTTAGAAATTGTGGT+TGG - chr8.2:30511072-30511091 None:intergenic 35.0%
TAGCTCAGAAATCTACCATT+AGG - chr8.2:30512178-30512197 None:intergenic 35.0%
TATTTCCCATATTCATGGCA+TGG - chr8.2:30510423-30510442 None:intergenic 35.0%
TGCTATTAGGTTTCCGTTAT+CGG + chr8.2:30511124-30511143 MS.gene037810:intron 35.0%
TGCTCAAATACCCTTTCATT+AGG + chr8.2:30513407-30513426 MS.gene037810:CDS 35.0%
TGCTTATAATAGTGACTGGA+GGG + chr8.2:30510612-30510631 MS.gene037810:intron 35.0%
TGTCAAGACGTATGACAAAA+GGG - chr8.2:30513606-30513625 None:intergenic 35.0%
TGTCATATGTCGGAAAATGT+GGG - chr8.2:30510080-30510099 None:intergenic 35.0%
TTGAGATGAACTAGAACTCA+CGG - chr8.2:30510454-30510473 None:intergenic 35.0%
TTGCTTATAATAGTGACTGG+AGG + chr8.2:30510611-30510630 MS.gene037810:intron 35.0%
TTGGTATACGATGCTGATAA+GGG + chr8.2:30509016-30509035 MS.gene037810:CDS 35.0%
TTTAATTCACGATGCATTCG+GGG - chr8.2:30510936-30510955 None:intergenic 35.0%
TTTGGTATACGATGCTGATA+AGG + chr8.2:30509015-30509034 MS.gene037810:CDS 35.0%
! ACTTTTTGGACCTGAAGATT+TGG + chr8.2:30508997-30509016 MS.gene037810:CDS 35.0%
! AGTGAGATTTGAGATCCATA+TGG - chr8.2:30510143-30510162 None:intergenic 35.0%
! CCAAATTTTCATTGACCACT+GGG + chr8.2:30513539-30513558 MS.gene037810:CDS 35.0%
! CTCATGTTGTTGTTACGTAA+AGG - chr8.2:30508947-30508966 None:intergenic 35.0%
! GGGTGTGCTTTATTGAAATT+TGG + chr8.2:30512467-30512486 MS.gene037810:intron 35.0%
!! TTAACTTTTGGGGACTTCTA+TGG - chr8.2:30511656-30511675 None:intergenic 35.0%
!!! AAGTGCTACTCCTTTTTTTG+GGG + chr8.2:30511606-30511625 MS.gene037810:intron 35.0%
!!! AGGGTTGTCTTTTTTGTTGA+TGG - chr8.2:30512205-30512224 None:intergenic 35.0%
!!! CAAAGTGCTACTCCTTTTTT+TGG + chr8.2:30511604-30511623 MS.gene037810:intron 35.0%
ACACACACACACACACAAAA+GGG + chr8.2:30513015-30513034 MS.gene037810:intron 40.0%
AGGATCTGAAAAAGTTGCAG+AGG + chr8.2:30508970-30508989 MS.gene037810:CDS 40.0%
AGTGACATCAAATGATACCG+TGG - chr8.2:30512871-30512890 None:intergenic 40.0%
AGTGACCTCTACTTTCCTAA+TGG + chr8.2:30512232-30512251 MS.gene037810:CDS 40.0%
AGTTGTATCGCTACATGTGA+TGG - chr8.2:30511268-30511287 None:intergenic 40.0%
ATAAAGAGTGATGCTACCGA+TGG - chr8.2:30511293-30511312 None:intergenic 40.0%
ATACGATGCTGATAAGGGTT+TGG + chr8.2:30509021-30509040 MS.gene037810:CDS 40.0%
ATGAATCGGTCGTTGAAGAT+TGG + chr8.2:30509089-30509108 MS.gene037810:CDS 40.0%
ATGGCACCAAAACTATGTCA+TGG - chr8.2:30511464-30511483 None:intergenic 40.0%
ATTCCCAATCTTAATCCCAG+TGG - chr8.2:30513557-30513576 None:intergenic 40.0%
CAACTCCATTAGGAAAGTAG+AGG - chr8.2:30512240-30512259 None:intergenic 40.0%
CATTTGAAGAATACACCCTC+CGG + chr8.2:30510481-30510500 MS.gene037810:intron 40.0%
CCAGAACCTTCCTAATGAAA+GGG - chr8.2:30513420-30513439 None:intergenic 40.0%
CCCAGTGGTCAATGAAAATT+TGG - chr8.2:30513542-30513561 None:intergenic 40.0%
CGGTAGCATCACTCTTTATA+GGG + chr8.2:30511294-30511313 MS.gene037810:intron 40.0%
CTAACACAACTCCAGAAAAC+TGG - chr8.2:30511047-30511066 None:intergenic 40.0%
CTGAATTTGTCAAAGAACGG+AGG + chr8.2:30513466-30513485 MS.gene037810:CDS 40.0%
GCATCGTATACCAAATCTTC+AGG - chr8.2:30509010-30509029 None:intergenic 40.0%
GCTATTAGGTTTCCGTTATC+GGG + chr8.2:30511125-30511144 MS.gene037810:intron 40.0%
GGAGCATGGACATAAATGAT+GGG - chr8.2:30511154-30511173 None:intergenic 40.0%
GGATCTGAAAAAGTTGCAGA+GGG + chr8.2:30508971-30508990 MS.gene037810:CDS 40.0%
GTACTTGTGACTGAGATTGA+TGG + chr8.2:30512034-30512053 MS.gene037810:CDS 40.0%
GTTGAAGATTGGGTTAACAC+AGG + chr8.2:30509100-30509119 MS.gene037810:CDS 40.0%
GTTTCACATCGGATATGAGA+TGG + chr8.2:30510977-30510996 MS.gene037810:intron 40.0%
TAAAGAGTGATGCTACCGAT+GGG - chr8.2:30511292-30511311 None:intergenic 40.0%
TATTGTTGCAGACGCAGATA+AGG + chr8.2:30509165-30509184 MS.gene037810:CDS 40.0%
TCGGTAGCATCACTCTTTAT+AGG + chr8.2:30511293-30511312 MS.gene037810:intron 40.0%
TGAATCGGTCGTTGAAGATT+GGG + chr8.2:30509090-30509109 MS.gene037810:CDS 40.0%
TGACCACTGGGATTAAGATT+GGG + chr8.2:30513551-30513570 MS.gene037810:CDS 40.0%
TGAGTATTTGGATGAAGCGT+CGG - chr8.2:30512119-30512138 None:intergenic 40.0%
TGGAGCATGGACATAAATGA+TGG - chr8.2:30511155-30511174 None:intergenic 40.0%
TGTTTATAACAGTGACCGGA+GGG - chr8.2:30510499-30510518 None:intergenic 40.0%
TTATGTAGAGCCACCATTCA+CGG + chr8.2:30510790-30510809 MS.gene037810:intron 40.0%
TTGACCACTGGGATTAAGAT+TGG + chr8.2:30513550-30513569 MS.gene037810:CDS 40.0%
TTGAGCATTATGTCCAGTTC+AGG - chr8.2:30513394-30513413 None:intergenic 40.0%
TTGTTTATAACAGTGACCGG+AGG - chr8.2:30510500-30510519 None:intergenic 40.0%
! CCCAAATTTTCATTGACCAC+TGG + chr8.2:30513538-30513557 MS.gene037810:CDS 40.0%
! GTTGTTGTTACGTAAAGGAG+CGG - chr8.2:30508942-30508961 None:intergenic 40.0%
!! GATAACGGAAACCTAATAGC+AGG - chr8.2:30511125-30511144 None:intergenic 40.0%
!! GGAAGTATTTCCCCAAAAAG+AGG - chr8.2:30511443-30511462 None:intergenic 40.0%
!!! CAGTTTTCTGGAGTTGTGTT+AGG + chr8.2:30511045-30511064 MS.gene037810:intron 40.0%
!!! CTTTTTTTGGGGTGAAACGA+GGG + chr8.2:30511617-30511636 MS.gene037810:intron 40.0%
!!! GGTTTGGCTTTTGATGGAAA+TGG + chr8.2:30509136-30509155 MS.gene037810:CDS 40.0%
!!! TGACATAGTTTTGGTGCCAT+TGG + chr8.2:30511464-30511483 MS.gene037810:intron 40.0%
!!! TTTTTTTGGGGTGAAACGAG+GGG + chr8.2:30511618-30511637 MS.gene037810:intron 40.0%
AACGGAAACCTAATAGCAGG+TGG - chr8.2:30511122-30511141 None:intergenic 45.0%
AATGGCTAGGATTTCCCCAA+TGG - chr8.2:30511492-30511511 None:intergenic 45.0%
ACCGCTGAGGCTATAATAAC+TGG - chr8.2:30508851-30508870 None:intergenic 45.0%
AGGAGTTATCACTGTGGACT+TGG + chr8.2:30513486-30513505 MS.gene037810:CDS 45.0%
AGTAGAGGTCACTCACTAGT+AGG - chr8.2:30512225-30512244 None:intergenic 45.0%
ATATGGAGAACGTGGGAAGA+TGG - chr8.2:30510126-30510145 None:intergenic 45.0%
ATCCACACACATCAATGGCT+AGG - chr8.2:30511505-30511524 None:intergenic 45.0%
ATCCTAGCCATTGATGTGTG+TGG + chr8.2:30511500-30511519 MS.gene037810:intron 45.0%
ATCTTCCCACGTTCTCCATA+TGG + chr8.2:30510125-30510144 MS.gene037810:intron 45.0%
CACACACACACACACACAAA+AGG + chr8.2:30513014-30513033 MS.gene037810:intron 45.0%
CACACATCCACACACATCAA+TGG - chr8.2:30511510-30511529 None:intergenic 45.0%
CACCAATGACACCAAAGCTA+TGG + chr8.2:30511578-30511597 MS.gene037810:intron 45.0%
CCATCAAAAGCCAAACCAAG+TGG - chr8.2:30509133-30509152 None:intergenic 45.0%
CCCAGTTATTATAGCCTCAG+CGG + chr8.2:30508847-30508866 MS.gene037810:CDS 45.0%
CCCTTTCATTAGGAAGGTTC+TGG + chr8.2:30513417-30513436 MS.gene037810:CDS 45.0%
CCGCTGAGGCTATAATAACT+GGG - chr8.2:30508850-30508869 None:intergenic 45.0%
CCTCGTTTCACCCCAAAAAA+AGG - chr8.2:30511619-30511638 None:intergenic 45.0%
GAAGATTGGGTTAACACAGG+TGG + chr8.2:30509103-30509122 MS.gene037810:CDS 45.0%
GAATGTTATCAGGCATGCCA+GGG - chr8.2:30512812-30512831 None:intergenic 45.0%
GAGATCCATATGGAGAACGT+GGG - chr8.2:30510133-30510152 None:intergenic 45.0%
GCCAGAACCTTCCTAATGAA+AGG - chr8.2:30513421-30513440 None:intergenic 45.0%
GCCCAACCACAATTTCTAAG+TGG + chr8.2:30511067-30511086 MS.gene037810:intron 45.0%
GTACCTCTATAAGTGCCCTT+TGG + chr8.2:30510305-30510324 MS.gene037810:intron 45.0%
GTAGAGGTCACTCACTAGTA+GGG - chr8.2:30512224-30512243 None:intergenic 45.0%
GTAGCGATACAACTTCCCAT+CGG + chr8.2:30511274-30511293 MS.gene037810:intron 45.0%
GTGTGTGTGTGTGTGTGAAT+TGG - chr8.2:30513011-30513030 None:intergenic 45.0%
GTTATCACTGTGGACTTGGA+AGG + chr8.2:30513490-30513509 MS.gene037810:CDS 45.0%
TAATGGAGTTGCAGTCTCAC+CGG + chr8.2:30512249-30512268 MS.gene037810:CDS 45.0%
TAGAGTGCAATGGACATGCA+CGG + chr8.2:30509939-30509958 MS.gene037810:intron 45.0%
TATGGAGAACGTGGGAAGAT+GGG - chr8.2:30510125-30510144 None:intergenic 45.0%
TATGTAGAGCCACCATTCAC+GGG + chr8.2:30510791-30510810 MS.gene037810:intron 45.0%
TGAATGTTATCAGGCATGCC+AGG - chr8.2:30512813-30512832 None:intergenic 45.0%
TGAGATCCATATGGAGAACG+TGG - chr8.2:30510134-30510153 None:intergenic 45.0%
TGATGTGTGTGGATGTGTGT+GGG + chr8.2:30511511-30511530 MS.gene037810:intron 45.0%
TTGATGTGTGTGGATGTGTG+TGG + chr8.2:30511510-30511529 MS.gene037810:intron 45.0%
TTGTCAAGGGGGAAAACAAC+CGG - chr8.2:30508899-30508918 None:intergenic 45.0%
! AAGCACACCCCTTAGTTTGA+TGG - chr8.2:30512457-30512476 None:intergenic 45.0%
! ATGGGGTGTTCATACTGTTC+CGG - chr8.2:30512584-30512603 None:intergenic 45.0%
! ATTGAGACGGGACCTCTTTT+TGG + chr8.2:30511428-30511447 MS.gene037810:intron 45.0%
! GTACTGGATTGGAATAGCCA+CGG + chr8.2:30512851-30512870 MS.gene037810:CDS 45.0%
! GTATCGCTACATGTGATGGA+AGG - chr8.2:30511264-30511283 None:intergenic 45.0%
! GTTGCAGAGGGAGAACTTTT+TGG + chr8.2:30508983-30509002 MS.gene037810:CDS 45.0%
! TACCTCAGAAGCCAGTTTTC+TGG + chr8.2:30511033-30511052 MS.gene037810:intron 45.0%
! TCAGGCATTTTCTCCTGAAC+TGG + chr8.2:30513378-30513397 MS.gene037810:intron 45.0%
! TTGAGACGGGACCTCTTTTT+GGG + chr8.2:30511429-30511448 MS.gene037810:intron 45.0%
! TTTAGTGGGCACATCATGCA+TGG + chr8.2:30511922-30511941 MS.gene037810:intron 45.0%
!! AATGATGGGTGACCCGATAA+CGG - chr8.2:30511140-30511159 None:intergenic 45.0%
!! GAAAAGTTTTGTGACCTCCC+TGG + chr8.2:30512792-30512811 MS.gene037810:CDS 45.0%
!! GGAAAACAACCGGTTCGAAA+GGG - chr8.2:30508889-30508908 None:intergenic 45.0%
!! TGCCATAGCTTTGGTGTCAT+TGG - chr8.2:30511583-30511602 None:intergenic 45.0%
!! TTGGCTCAGTTGGTAAGGAA+CGG + chr8.2:30510207-30510226 MS.gene037810:intron 45.0%
!!! CCACTTGGTTTGGCTTTTGA+TGG + chr8.2:30509130-30509149 MS.gene037810:CDS 45.0%
!!! CCTTTTTTTGGGGTGAAACG+AGG + chr8.2:30511616-30511635 MS.gene037810:intron 45.0%
!!! ATTTTTAAATACTTTTTTTT+TGG + chr8.2:30509820-30509839 MS.gene037810:intron 5.0%
!!! TTAAATATTTTTTATTTAAG+TGG - chr8.2:30511360-30511379 None:intergenic 5.0%
AACACAGGTGGAAGACCACT+TGG + chr8.2:30509115-30509134 MS.gene037810:CDS 50.0%
AACTGAGCCAACGTGTGTGT+TGG - chr8.2:30510198-30510217 None:intergenic 50.0%
ACGTAAAGGAGCGGTTGTAG+TGG - chr8.2:30508933-30508952 None:intergenic 50.0%
ACTAAAACAATCCTGGGGGC+TGG - chr8.2:30509297-30509316 None:intergenic 50.0%
AGGTGGAAGACCACTTGGTT+TGG + chr8.2:30509120-30509139 MS.gene037810:CDS 50.0%
ATGTAGAGCCACCATTCACG+GGG + chr8.2:30510792-30510811 MS.gene037810:intron 50.0%
ATGTCCATGCTCCAGATGTC+CGG + chr8.2:30511161-30511180 MS.gene037810:intron 50.0%
CACAACCTTCTGCAAGGAAG+TGG - chr8.2:30510234-30510253 None:intergenic 50.0%
CATATTCATGGCATGGGTGC+CGG - chr8.2:30510416-30510435 None:intergenic 50.0%
CCTAATAGCAGGTGGTCCAA+CGG - chr8.2:30511114-30511133 None:intergenic 50.0%
CGAACACACAACCTTCTGCA+AGG - chr8.2:30510240-30510259 None:intergenic 50.0%
CGGGGTGGGATACTGAAAAA+TGG + chr8.2:30510810-30510829 MS.gene037810:intron 50.0%
CTTTGCACCAACACACACGT+TGG + chr8.2:30510188-30510207 MS.gene037810:intron 50.0%
GAACGGAGGAGTTATCACTG+TGG + chr8.2:30513480-30513499 MS.gene037810:CDS 50.0%
GATGTGTGTGGATGTGTGTG+GGG + chr8.2:30511512-30511531 MS.gene037810:intron 50.0%
GATTTCCCCAATGGCACCAA+TGG - chr8.2:30511483-30511502 None:intergenic 50.0%
GCAGACGCAGATAAGGTAAC+TGG + chr8.2:30509172-30509191 MS.gene037810:intron 50.0%
GCGCGAGAAACTCATAGGAT+GGG + chr8.2:30512656-30512675 MS.gene037810:intron 50.0%
GGCACCCATGCCATGAATAT+GGG + chr8.2:30510415-30510434 MS.gene037810:intron 50.0%
GGTGAGACTGCAACTCCATT+AGG - chr8.2:30512250-30512269 None:intergenic 50.0%
GTGTGTGTGATGTGTGTGTG+TGG + chr8.2:30511537-30511556 MS.gene037810:intron 50.0%
TCCCCCTTGACAAACAAACC+CGG + chr8.2:30508906-30508925 MS.gene037810:CDS 50.0%
TGTGTGATGTGTGTGTGTGG+TGG + chr8.2:30511540-30511559 MS.gene037810:intron 50.0%
! ACCGGGTTTGTTTGTCAAGG+GGG - chr8.2:30508910-30508929 None:intergenic 50.0%
! CTCCAGAAAACTGGCTTCTG+AGG - chr8.2:30511038-30511057 None:intergenic 50.0%
! GACCGGGTTTGTTTGTCAAG+GGG - chr8.2:30508911-30508930 None:intergenic 50.0%
! GGACCGGGTTTGTTTGTCAA+GGG - chr8.2:30508912-30508931 None:intergenic 50.0%
! TAGCCTCAGCGGTTTTCTAC+CGG + chr8.2:30508858-30508877 MS.gene037810:CDS 50.0%
! TGAGACGGGACCTCTTTTTG+GGG + chr8.2:30511430-30511449 MS.gene037810:intron 50.0%
! TGGACCGGGTTTGTTTGTCA+AGG - chr8.2:30508913-30508932 None:intergenic 50.0%
!! AACACACACGTTGGCTCAGT+TGG + chr8.2:30510197-30510216 MS.gene037810:intron 50.0%
!! ACACGTTGGCTCAGTTGGTA+AGG + chr8.2:30510202-30510221 MS.gene037810:intron 50.0%
!! AGTTTAGGTTGGTTCGGCTC+CGG - chr8.2:30510362-30510381 None:intergenic 50.0%
!! ATGATGGACATGGGCAGTAC+TGG + chr8.2:30512835-30512854 MS.gene037810:CDS 50.0%
!! GCACTTTGGTGCCATAGCTT+TGG - chr8.2:30511592-30511611 None:intergenic 50.0%
!! GGGAAAACAACCGGTTCGAA+AGG - chr8.2:30508890-30508909 None:intergenic 50.0%
!! GGGGTTGATGTAGCACATGA+TGG + chr8.2:30512079-30512098 MS.gene037810:CDS 50.0%
!! GGTCCAAAGGGCACTTATAG+AGG - chr8.2:30510311-30510330 None:intergenic 50.0%
!! TTGGTGCCATTGGTGCCATT+GGG + chr8.2:30511474-30511493 MS.gene037810:intron 50.0%
!! TTTGGTGCCATTGGTGCCAT+TGG + chr8.2:30511473-30511492 MS.gene037810:intron 50.0%
ACGGTCCACTTCCTTGCAGA+AGG + chr8.2:30510226-30510245 MS.gene037810:intron 55.0%
AGTTTCTCGCGCGCCCTATT+CGG - chr8.2:30512648-30512667 None:intergenic 55.0%
ATGCTCCAGATGTCCGGTTC+TGG + chr8.2:30511167-30511186 MS.gene037810:intron 55.0%
CAATTACTGTTCCAGCCCCC+AGG + chr8.2:30509283-30509302 MS.gene037810:intron 55.0%
CACCAACACTGCCCTCACAT+CGG - chr8.2:30510273-30510292 None:intergenic 55.0%
CCGTTGGACCACCTGCTATT+AGG + chr8.2:30511111-30511130 MS.gene037810:intron 55.0%
CGCGCGAGAAACTCATAGGA+TGG + chr8.2:30512655-30512674 MS.gene037810:intron 55.0%
CGGCACCCATGCCATGAATA+TGG + chr8.2:30510414-30510433 MS.gene037810:intron 55.0%
GATTCCCTCTGCCGATGTGA+GGG + chr8.2:30510259-30510278 MS.gene037810:intron 55.0%
TAAGTGCCCTTTGGACCCAG+AGG + chr8.2:30510314-30510333 MS.gene037810:intron 55.0%
TCAGTATCCCACCCCGTGAA+TGG - chr8.2:30510806-30510825 None:intergenic 55.0%
TGAAACGAGGGGCAGAAGAC+AGG + chr8.2:30511629-30511648 MS.gene037810:intron 55.0%
TGTTATCAGGCATGCCAGGG+AGG - chr8.2:30512809-30512828 None:intergenic 55.0%
! AGAACCGGACATCTGGAGCA+TGG - chr8.2:30511168-30511187 None:intergenic 55.0%
! GGACATGGGCAGTACTGGAT+TGG + chr8.2:30512840-30512859 MS.gene037810:CDS 55.0%
!! AAGGAGCGGTTGTAGTGGAC+CGG - chr8.2:30508928-30508947 None:intergenic 55.0%
!! ATGTCCGGTTCTGGACGTGA+GGG + chr8.2:30511176-30511195 MS.gene037810:intron 55.0%
!! GATGTGAGGGCAGTGTTGGT+GGG + chr8.2:30510272-30510291 MS.gene037810:intron 55.0%
!! TGGTGCCATTGGTGCCATTG+GGG + chr8.2:30511475-30511494 MS.gene037810:intron 55.0%
ACTGCCCTCACATCGGCAGA+GGG - chr8.2:30510266-30510285 None:intergenic 60.0%
AGAGCCACCATTCACGGGGT+GGG + chr8.2:30510796-30510815 MS.gene037810:intron 60.0%
AGGGCGCGCGAGAAACTCAT+AGG + chr8.2:30512651-30512670 MS.gene037810:intron 60.0%
CACGTCCAGAACCGGACATC+TGG - chr8.2:30511175-30511194 None:intergenic 60.0%
CATCCCCTCACGTCCAGAAC+CGG - chr8.2:30511183-30511202 None:intergenic 60.0%
CGATTCCCTCTGCCGATGTG+AGG + chr8.2:30510258-30510277 MS.gene037810:intron 60.0%
GAGCCGGTAGAAAACCGCTG+AGG - chr8.2:30508864-30508883 None:intergenic 60.0%
GAGCCTCCTCCAAGATCCGT+TGG + chr8.2:30511095-30511114 MS.gene037810:intron 60.0%
GCAGGTGGTCCAACGGATCT+TGG - chr8.2:30511107-30511126 None:intergenic 60.0%
GGTCCAACGGATCTTGGAGG+AGG - chr8.2:30511101-30511120 None:intergenic 60.0%
GGTGGTCCAACGGATCTTGG+AGG - chr8.2:30511104-30511123 None:intergenic 60.0%
GTATCCCACCCCGTGAATGG+TGG - chr8.2:30510803-30510822 None:intergenic 60.0%
TAGAGCCACCATTCACGGGG+TGG + chr8.2:30510795-30510814 MS.gene037810:intron 60.0%
TCCGGTCATCACCAGGGTCA+GGG - chr8.2:30510344-30510363 None:intergenic 60.0%
TGCCGATGTGAGGGCAGTGT+TGG + chr8.2:30510268-30510287 MS.gene037810:intron 60.0%
TTCGGCTCCGGTCATCACCA+GGG - chr8.2:30510350-30510369 None:intergenic 60.0%
! CGATGTGAGGGCAGTGTTGG+TGG + chr8.2:30510271-30510290 MS.gene037810:intron 60.0%
!! AGGAGCGGTTGTAGTGGACC+GGG - chr8.2:30508927-30508946 None:intergenic 60.0%
!! GATGTCCGGTTCTGGACGTG+AGG + chr8.2:30511175-30511194 MS.gene037810:intron 60.0%
!! TGTCCGGTTCTGGACGTGAG+GGG + chr8.2:30511177-30511196 MS.gene037810:intron 60.0%
CACTGCCCTCACATCGGCAG+AGG - chr8.2:30510267-30510286 None:intergenic 65.0%
CTCCGGTCATCACCAGGGTC+AGG - chr8.2:30510345-30510364 None:intergenic 65.0%
GGCACGCCTCTGGGTCCAAA+GGG - chr8.2:30510323-30510342 None:intergenic 65.0%
GTTCGGCTCCGGTCATCACC+AGG - chr8.2:30510351-30510370 None:intergenic 65.0%
! CCGGCTCGACCCTTTCGAAC+CGG + chr8.2:30508877-30508896 MS.gene037810:CDS 65.0%
! CCGGTTCGAAAGGGTCGAGC+CGG - chr8.2:30508880-30508899 None:intergenic 65.0%
! GCCCTGACCCTGGTGATGAC+CGG + chr8.2:30510340-30510359 MS.gene037810:intron 65.0%
CAGGGTCAGGGCACGCCTCT+GGG - chr8.2:30510332-30510351 None:intergenic 70.0%
GGGCACGCCTCTGGGTCCAA+AGG - chr8.2:30510324-30510343 None:intergenic 70.0%
CCAGGGTCAGGGCACGCCTC+TGG - chr8.2:30510333-30510352 None:intergenic 75.0%
! CCAGAGGCGTGCCCTGACCC+TGG + chr8.2:30510330-30510349 MS.gene037810:intron 75.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 30508767 30513657 30508767 ID=MS.gene037810
chr8.2 mRNA 30508767 30513657 30508767 ID=MS.gene037810.t1;Parent=MS.gene037810
chr8.2 exon 30508767 30509186 30508767 ID=MS.gene037810.t1.exon1;Parent=MS.gene037810.t1
chr8.2 CDS 30508767 30509186 30508767 ID=cds.MS.gene037810.t1;Parent=MS.gene037810.t1
chr8.2 exon 30511998 30512305 30511998 ID=MS.gene037810.t1.exon2;Parent=MS.gene037810.t1
chr8.2 CDS 30511998 30512305 30511998 ID=cds.MS.gene037810.t1;Parent=MS.gene037810.t1
chr8.2 exon 30512743 30512872 30512743 ID=MS.gene037810.t1.exon3;Parent=MS.gene037810.t1
chr8.2 CDS 30512743 30512872 30512743 ID=cds.MS.gene037810.t1;Parent=MS.gene037810.t1
chr8.2 exon 30513382 30513657 30513382 ID=MS.gene037810.t1.exon4;Parent=MS.gene037810.t1
chr8.2 CDS 30513382 30513657 30513382 ID=cds.MS.gene037810.t1;Parent=MS.gene037810.t1
Gene Sequence

>MS.gene037810

ATGTCTGAGTCAAACACAAACACAAGAACTCAAACAAGAACAAGAACATCTCTTTTCACACCGTTCATAGCTATAATTCTCCCAGTTATTATAGCCTCAGCGGTTTTCTACCGGCTCGACCCTTTCGAACCGGTTGTTTTCCCCCTTGACAAACAAACCCGGTCCACTACAACCGCTCCTTTACGTAACAACAACATGAGATTAGGATCTGAAAAAGTTGCAGAGGGAGAACTTTTTGGACCTGAAGATTTGGTATACGATGCTGATAAGGGTTTGGTTTATACTAGTTGTGAAGATGGATGGATTAAGAGAATCACAGTGAATGAATCGGTCGTTGAAGATTGGGTTAACACAGGTGGAAGACCACTTGGTTTGGCTTTTGATGGAAATGGTGAACTTATTGTTGCAGACGCAGATAAGGTAACTGGTTTTCATATAAATGTTGTATTTGAATGTTTTTTCTGCAAATGGAAATCAACTAAATTTTTTCTTTTTTTAAGGTAAAAAAAGTTAAGGCAATTACTGTTCCAGCCCCCAGGATTGTTTTAGTTTTTCTAAAAAAAACCATTGACTTGACCAAAAAAAAAAACCATTGATTTTTTCTTAAAATCTAAGAATAGGTTGAAATAAAACAAACCCCTCAAACGAACATATTAAAATAAGAAATCAATTTCAATGAATCACATATATAATATGAGTTTGAAGATGGTGGATTGACAATACAAAACTATTTTCCTACAACAATTCTACATATTTTGATTGGTTATGTGTGAAAAATCGATTTAGAATGTCAACTCACTACCCTTAAAGTCATCAAATATTTTGCTATAGTATTAACTATCTTTGATTTATTCAAGATTAACTATCTTTTTTTAAATCTTGAAATAATTTCCGTCGAAAAACAAAGTCTTGAAATAACTTTTAAGTATTTTTAAAATTTACCGTGAATATTTCTACAAATGCATCCAACTAAAAATATAGGTATTTGTAGATGTATTAACTATCTTTTTTTTAGTCTTGAAATAACTTCTTTTAAAAAAAAGTCTTGAAATAATTTTTAAATACTTTTTTTTTGGTACAAATAATTTTTAAATACTTATTAATATTTATTGTGAATATTGTAACAAGAGTTATATAATTTTTTTCCGGTTGTACAAAAAAAATATATAAATTAGAGTGCAATGGACATGCACGGTGTAAATTATTTATGCAAAGTAGACCAATCAAATTTTGTTATCGTGTCACATCAAAAATTATATTAATTAATATCTTGTTCAAAAAAATATATTAATTAAATTAAAATAAAGAAGCCCACATTTTCCGACATATGACATGTTTATTATTTGTCATATCTTCCCATCTTCCCACGTTCTCCATATGGATCTCAAATCTCACTATAAAACTCATCACAGAATAACTAACTTTGCACCAACACACACGTTGGCTCAGTTGGTAAGGAACGGTCCACTTCCTTGCAGAAGGTTGTGTGTTCGATTCCCTCTGCCGATGTGAGGGCAGTGTTGGTGGGTGATCTGTAAGTACCTCTATAAGTGCCCTTTGGACCCAGAGGCGTGCCCTGACCCTGGTGATGACCGGAGCCGAACCAACCTAAACTTTTATGTAACCAAAAAAAACTAACTTTGCAGCCGGCACCCATGCCATGAATATGGGAAATACTTGAGTGCCGTGAGTTCTAGTTCATCTCAAGATGTGACATTTGAAGAATACACCCTCCGGTCACTGTTATAAACAAAAATCTACATTTTACATTTAATTAATTATGTATGTGGTCATTATTATAGACCACATACATCATTTAATAAATGAATCTAAAATGTTAATTTTTGCTTATAATAGTGACTGGAGGGTGTATTGTTTTTGAGTTTTAAGAAAAGTACTGATTTTTTTTTTTTTGAGAGAAAGAAAAGTACTGATTGTATATTCTAAATATTATTGTTTTTGACCATGCAGAAATTTATGTTATAGTAGTGACTTGTTGAAACCGTGACAGTCCAAATTATTTTTATGTAGAGCCACCATTCACGGGGTGGGATACTGAAAAATGGACAGAGCAATTTTTTTAATATTTCATTTAAAAAAATGACTTGAGAAAACAGTAGGATTTTATTGGGTGTTAGTGTAAACACACTTTATACAATATTCTTACCCCGAATGCATCGTGAATTAAAAAATAGCTAGCAATGTTAAGAGTTTCACATCGGATATGAGATGGTCTGACAATTTGTTTATAAGTGGGGGCAATACTTACCTCAGAAGCCAGTTTTCTGGAGTTGTGTTAGGCCCAACCACAATTTCTAAGTGGTATCAGAGCCTCCTCCAAGATCCGTTGGACCACCTGCTATTAGGTTTCCGTTATCGGGTCACCCATCATTTATGTCCATGCTCCAGATGTCCGGTTCTGGACGTGAGGGGATGTGTTAAGAATCTCACATCGAATATGAGATGGCACAATGTGTTTATAAATAGGGGCAATCCTTCCATCACATGTAGCGATACAACTTCCCATCGGTAGCATCACTCTTTATAGGGTGCATCTCTTTAATGTAACTTTCGTAAAACAAATTAAATTCCACTTAAATAAAAAATATTTAAAAAATTAAATTTAATTACACTTAAATAAAAAAATGTAAAAAACAGAAAATTGAGACGGGACCTCTTTTTGGGGAAATACTTCCATGACATAGTTTTGGTGCCATTGGTGCCATTGGGGAAATCCTAGCCATTGATGTGTGTGGATGTGTGTGGGGATGTGTGTGTGATGTGTGTGTGTGGTGGAGATGCAAGCTATGACACCAATGACACCAAAGCTATGGCACCAAAGTGCTACTCCTTTTTTTGGGGTGAAACGAGGGGCAGAAGACAGGACCATAGAAGTCCCCAAAAGTTAATAAAAATGAAAGATTTTTTCACAAGAAACAAAAAAGTCATATGTGACAGCATGCAATTCTTCCAAATAGTTACTACTCCAAAATACCTCATGTATGATTAGCCAAAATATCATTGTCGATTGTTATGTTTTTATAGATTCTTTTCTTTCTTGCGTTAAATCATTGGACTAAATTGTGACAAGTTACATTATCATTTTTTTTTGGAAGAGCAAAGACAATTTTATTGAAATGATACATTATTATTTATTTAGTGGGCACATCATGCATGGCTTGTGACCCACTCATTCACTAATCTAATTAATTAATCAATGATATGCTACAGGGACTACTGAGAGTAACAAGAGAAAAAGAGATTGAAGTACTTGTGACTGAGATTGATGGCCTAATATTCAAAATAACAGATGGGGTTGATGTAGCACATGATGGTACTATTTATTTCACCGACGCTTCATCCAAATACTCAATCAAGGATTCTGTCCTAGATATATTAGAAGGCAAACCTAATGGTAGATTTCTGAGCTATAATCCATCAACAAAAAAGACAACCCTACTAGTGAGTGACCTCTACTTTCCTAATGGAGTTGCAGTCTCACCGGATCAAAATTTTGTCGTCTTTTGTGAAACCTCCATGTAAGTTGTTTATCACCTTGTTAGTACAAGTATAAAAGTAAAAATCATTGTCTTCATGAACATAAAAAAAGAAGTAAAAACATTGTAAAATCAAAGTGTCAAAATAATTTGAAAAATGAAAATAGCATACATATTCTCAAATAAATTTCCATCAAACTAAGGGGTGTGCTTTATTGAAATTTGGGATCAAGCCATGTTACTTGCATACTTCTAAGAATCATTCTTTTCTCACATTGTTGATTTCTCGCGTGCCCTATGTAGTTTCGATTATATAACCGGAACAGTATGAACACCCCATAAAACTTAAAAAACACGTTCAAACATTTCAGATTTTAGAATCCGAATAGGGCGCGCGAGAAACTCATAGGATGGGAAAAACAATGACCTACTTCTAAATGTTGTTGGACTTATTTTTATTTTATGGGATAATGTTGCAGGATGAATTGCAAGAAATATTACATACATGGCCCAAAAAAAGGTAGCACAGAAAAGTTTTGTGACCTCCCTGGCATGCCTGATAACATTCATTATGATGGACATGGGCAGTACTGGATTGGAATAGCCACGGTATCATTTGATGTCACTATTTTATTTTTATTAACTATTTATTGAAGTGTTAAATTTATAGAAGTAGAGTTTTGTCATTCATTATCGTCATGTTCGACTCAAGAGATTAATCTCTACAATTGTGGGCAGAAGATACCAATTCACACACACACACACACAAAAGGGATAAGATCGATGTTAATTTACCAAAAATATGTGACATCCAATTTAGGTTTTTCTTAAGGCCATTTGTACAATGAACAGAAAAGTGCTAATTATATGTTGGGTCTTGCTAACTTGTGCACTTAAAGCACATGTTAATGATTCTAAAAATAGTAAATTTATTGAGAAAAATTAATTCACATGAATTATTTTACTTGTTGAGAAATAATTTAGCAAAATTTTCAATACAAAATTTCTATGTTTAATACATTAACATGTGCCTTTATAGACACATGTTAGCGTTTCCCTTATATGTATTGGTAACTCATATTAGATTAATGTTGTTGTTTGTGTATTTCTTCTGTCAGGCATTTTCTCCTGAACTGGACATAATGCTCAAATACCCTTTCATTAGGAAGGTTCTGGCAATCATCACAAAAAAAGTTTCAAGTCTGAATTTGTCAAAGAACGGAGGAGTTATCACTGTGGACTTGGAAGGAAAACCTACAACACATTACTATGATCCCAAATTTTCATTGACCACTGGGATTAAGATTGGGAATCACATGTATTGTGGTTCCATTTTATACCCTTTTGTCATACGTCTTGACATTGAGAAGTATCCTGCTCTACCTACAATTTAA

Protein sequence

>MS.gene037810.t1

MSESNTNTRTQTRTRTSLFTPFIAIILPVIIASAVFYRLDPFEPVVFPLDKQTRSTTTAPLRNNNMRLGSEKVAEGELFGPEDLVYDADKGLVYTSCEDGWIKRITVNESVVEDWVNTGGRPLGLAFDGNGELIVADADKGLLRVTREKEIEVLVTEIDGLIFKITDGVDVAHDGTIYFTDASSKYSIKDSVLDILEGKPNGRFLSYNPSTKKTTLLVSDLYFPNGVAVSPDQNFVVFCETSMMNCKKYYIHGPKKGSTEKFCDLPGMPDNIHYDGHGQYWIGIATAFSPELDIMLKYPFIRKVLAIITKKVSSLNLSKNGGVITVDLEGKPTTHYYDPKFSLTTGIKIGNHMYCGSILYPFVIRLDIEKYPALPTI