Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27212.t1 | XP_003629183.2 | 91.2 | 375 | 33 | 0 | 1 | 375 | 1 | 375 | 3.20E-197 | 697.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27212.t1 | Q9SD05 | 48.6 | 360 | 173 | 7 | 20 | 371 | 11 | 366 | 4.3e-94 | 346.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27212.t1 | G7LA68 | 91.2 | 375 | 33 | 0 | 1 | 375 | 1 | 375 | 2.3e-197 | 697.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene27212 | MS.gene052008 | PPI |
| MS.gene27212 | MS.gene037810 | PPI |
| MS.gene27212 | MS.gene017554 | PPI |
| MS.gene23776 | MS.gene27212 | PPI |
| MS.gene27212 | MS.gene037809 | PPI |
| MS.gene27212 | MS.gene98728 | PPI |
| MS.gene27212 | MS.gene66625 | PPI |
| MS.gene037809 | MS.gene27212 | PPI |
| MS.gene27212 | MS.gene061292 | PPI |
| MS.gene27212 | MS.gene23775 | PPI |
| MS.gene27212 | MS.gene034366 | PPI |
| MS.gene27212 | MS.gene27211 | PPI |
| MS.gene27212 | MS.gene017556 | PPI |
| MS.gene27212 | MS.gene23780 | PPI |
| MS.gene037810 | MS.gene27212 | PPI |
| MS.gene27212 | MS.gene35719 | PPI |
| MS.gene27212 | MS.gene017555 | PPI |
| MS.gene27212 | MS.gene059296 | PPI |
| MS.gene27212 | MS.gene27210 | PPI |
| MS.gene27212 | MS.gene23779 | PPI |
| MS.gene27212 | MS.gene85273 | PPI |
| MS.gene27212 | MS.gene61630 | PPI |
| MS.gene27212 | MS.gene037812 | PPI |
| MS.gene27212 | MS.gene017558 | PPI |
| MS.gene27212 | MS.gene032181 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27212.t1 | MTR_8g074210 | 92.800 | 375 | 27 | 0 | 1 | 375 | 1 | 375 | 0.0 | 715 |
| MS.gene27212.t1 | MTR_8g074270 | 87.467 | 375 | 47 | 0 | 1 | 375 | 1 | 375 | 0.0 | 677 |
| MS.gene27212.t1 | MTR_8g074170 | 85.333 | 375 | 55 | 0 | 1 | 375 | 1 | 375 | 0.0 | 659 |
| MS.gene27212.t1 | MTR_1g075865 | 89.720 | 107 | 11 | 0 | 167 | 273 | 7 | 113 | 1.03e-66 | 207 |
| MS.gene27212.t1 | MTR_8g074320 | 55.330 | 197 | 68 | 2 | 49 | 241 | 42 | 222 | 1.16e-66 | 210 |
| MS.gene27212.t1 | MTR_2g042370 | 32.113 | 355 | 226 | 9 | 22 | 367 | 10 | 358 | 7.69e-52 | 176 |
| MS.gene27212.t1 | MTR_2g042430 | 32.670 | 352 | 221 | 10 | 22 | 364 | 22 | 366 | 4.93e-51 | 175 |
| MS.gene27212.t1 | MTR_2g042420 | 32.113 | 355 | 222 | 11 | 22 | 367 | 6 | 350 | 1.40e-50 | 173 |
| MS.gene27212.t1 | MTR_4g050190 | 33.133 | 332 | 189 | 7 | 63 | 361 | 55 | 386 | 2.17e-46 | 163 |
| MS.gene27212.t1 | MTR_2g087780 | 32.275 | 378 | 213 | 11 | 27 | 361 | 13 | 390 | 1.34e-45 | 161 |
| MS.gene27212.t1 | MTR_2g099030 | 32.890 | 301 | 157 | 7 | 73 | 329 | 77 | 376 | 6.43e-41 | 149 |
| MS.gene27212.t1 | MTR_7g490330 | 35.802 | 243 | 132 | 5 | 75 | 293 | 44 | 286 | 4.92e-39 | 142 |
| MS.gene27212.t1 | MTR_7g090300 | 31.776 | 321 | 177 | 9 | 76 | 361 | 51 | 364 | 2.68e-37 | 138 |
| MS.gene27212.t1 | MTR_7g090320 | 30.514 | 331 | 189 | 7 | 76 | 365 | 56 | 386 | 3.18e-37 | 139 |
| MS.gene27212.t1 | MTR_7g490350 | 30.481 | 374 | 199 | 14 | 28 | 361 | 12 | 364 | 6.63e-37 | 137 |
| MS.gene27212.t1 | MTR_7g090310 | 28.698 | 338 | 191 | 7 | 73 | 365 | 53 | 385 | 2.29e-36 | 136 |
| MS.gene27212.t1 | MTR_5g091980 | 34.632 | 231 | 130 | 4 | 76 | 285 | 46 | 276 | 4.23e-32 | 123 |
| MS.gene27212.t1 | MTR_8g074290 | 53.704 | 108 | 46 | 3 | 244 | 349 | 47 | 152 | 9.10e-32 | 117 |
| MS.gene27212.t1 | MTR_4g112670 | 31.579 | 266 | 154 | 6 | 76 | 313 | 37 | 302 | 1.78e-29 | 116 |
| MS.gene27212.t1 | MTR_4g112650 | 34.894 | 235 | 123 | 6 | 78 | 284 | 38 | 270 | 2.19e-29 | 116 |
| MS.gene27212.t1 | MTR_2g058450 | 31.489 | 235 | 136 | 4 | 78 | 287 | 40 | 274 | 1.20e-28 | 114 |
| MS.gene27212.t1 | MTR_4g112630 | 31.780 | 236 | 134 | 5 | 76 | 284 | 36 | 271 | 1.01e-25 | 106 |
| MS.gene27212.t1 | MTR_0003s0530 | 37.984 | 129 | 79 | 1 | 165 | 292 | 4 | 132 | 1.72e-22 | 94.4 |
| MS.gene27212.t1 | MTR_2g058410 | 32.948 | 173 | 110 | 5 | 121 | 288 | 1 | 172 | 9.26e-20 | 87.8 |
| MS.gene27212.t1 | MTR_8g075500 | 81.250 | 48 | 9 | 0 | 95 | 142 | 173 | 220 | 2.93e-19 | 85.9 |
| MS.gene27212.t1 | MTR_4g112840 | 35.000 | 100 | 65 | 0 | 195 | 294 | 63 | 162 | 6.25e-15 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27212.t1 | AT3G51430 | 48.333 | 360 | 174 | 7 | 20 | 371 | 11 | 366 | 1.73e-115 | 340 |
| MS.gene27212.t1 | AT3G51440 | 48.611 | 360 | 173 | 7 | 20 | 371 | 11 | 366 | 2.06e-115 | 340 |
| MS.gene27212.t1 | AT3G51420 | 47.778 | 360 | 176 | 7 | 20 | 371 | 11 | 366 | 2.02e-114 | 338 |
| MS.gene27212.t1 | AT3G51430 | 48.333 | 360 | 172 | 8 | 20 | 371 | 11 | 364 | 1.18e-113 | 336 |
| MS.gene27212.t1 | AT3G51450 | 47.911 | 359 | 175 | 7 | 21 | 371 | 12 | 366 | 3.57e-113 | 335 |
| MS.gene27212.t1 | AT5G22020 | 32.407 | 324 | 187 | 8 | 75 | 366 | 72 | 395 | 5.96e-44 | 157 |
| MS.gene27212.t1 | AT5G22020 | 32.407 | 324 | 187 | 8 | 75 | 366 | 72 | 395 | 5.96e-44 | 157 |
| MS.gene27212.t1 | AT5G22020 | 32.407 | 324 | 187 | 8 | 75 | 366 | 72 | 395 | 5.96e-44 | 157 |
| MS.gene27212.t1 | AT1G08470 | 29.156 | 391 | 228 | 9 | 21 | 366 | 3 | 389 | 9.32e-43 | 153 |
| MS.gene27212.t1 | AT3G59530 | 35.338 | 266 | 142 | 6 | 65 | 300 | 69 | 334 | 1.82e-42 | 153 |
| MS.gene27212.t1 | AT3G59530 | 35.338 | 266 | 142 | 6 | 65 | 300 | 69 | 334 | 1.82e-42 | 153 |
| MS.gene27212.t1 | AT3G59530 | 35.338 | 266 | 142 | 6 | 65 | 300 | 69 | 334 | 1.82e-42 | 153 |
| MS.gene27212.t1 | AT3G57030 | 30.530 | 321 | 179 | 10 | 78 | 361 | 56 | 369 | 1.32e-36 | 137 |
| MS.gene27212.t1 | AT2G41290 | 32.121 | 330 | 173 | 12 | 76 | 361 | 49 | 371 | 1.15e-31 | 123 |
| MS.gene27212.t1 | AT3G57020 | 29.032 | 310 | 194 | 8 | 76 | 365 | 51 | 354 | 3.79e-31 | 121 |
| MS.gene27212.t1 | AT3G57020 | 28.395 | 324 | 192 | 8 | 76 | 365 | 51 | 368 | 2.21e-30 | 119 |
| MS.gene27212.t1 | AT3G57010 | 28.097 | 331 | 198 | 8 | 76 | 372 | 52 | 376 | 1.86e-29 | 117 |
| MS.gene27212.t1 | AT1G74010 | 34.071 | 226 | 125 | 7 | 78 | 280 | 37 | 261 | 1.35e-26 | 108 |
| MS.gene27212.t1 | AT1G74020 | 29.841 | 315 | 174 | 11 | 78 | 368 | 38 | 329 | 5.13e-25 | 104 |
| MS.gene27212.t1 | AT2G41300 | 29.032 | 217 | 149 | 4 | 118 | 329 | 133 | 349 | 1.75e-24 | 103 |
| MS.gene27212.t1 | AT1G74000 | 30.870 | 230 | 136 | 6 | 74 | 280 | 36 | 265 | 3.52e-24 | 102 |
Find 93 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCACCAGTCAATGATAATT+TGG | 0.112733 | 8.3:-28891656 | None:intergenic |
| GGTTTCCTTCTAATATTTCT+AGG | 0.260269 | 8.3:-28890456 | None:intergenic |
| GCTTTGGGTGTAGTTTATAC+TGG | 0.281107 | 8.3:+28887877 | MS.gene27212:CDS |
| TATTACAAAAGGGTATAAAA+TGG | 0.302630 | 8.3:-28891710 | None:intergenic |
| ACCGCTGAGGCAATAATAAC+TGG | 0.333048 | 8.3:-28887694 | None:intergenic |
| GTTGCAGAGGGACAAGTTCT+TGG | 0.335418 | 8.3:+28887829 | MS.gene27212:CDS |
| TGTAGAGGTCTCTGAGTAGT+AGG | 0.338381 | 8.3:-28890525 | None:intergenic |
| CCATCATAATGAATGTTATC+AGG | 0.354766 | 8.3:-28891131 | None:intergenic |
| AGTTCTTGGACCTGAAGATT+TGG | 0.358218 | 8.3:+28887843 | MS.gene27212:CDS |
| GGATCATAGTAGTGTGTAGT+AGG | 0.366734 | 8.3:-28891634 | None:intergenic |
| GGTGAGACTGCAACTCCATT+AGG | 0.368711 | 8.3:-28890550 | None:intergenic |
| GTTTATACTGGCTGTGTAGA+TGG | 0.372424 | 8.3:+28887889 | MS.gene27212:CDS |
| ATGATGGACATGGGCAATAC+TGG | 0.373440 | 8.3:+28891147 | MS.gene27212:CDS |
| CTTAACAAGAACATGCGATT+AGG | 0.376850 | 8.3:+28887796 | MS.gene27212:CDS |
| ATGAATCGGTGGTTGAAGAT+TGG | 0.379468 | 8.3:+28887935 | MS.gene27212:CDS |
| TACTCAAATACCCTTTCATT+AGG | 0.393415 | 8.3:+28891524 | MS.gene27212:CDS |
| TTGACTGGTGGGATAAAGAT+TGG | 0.398467 | 8.3:+28891667 | MS.gene27212:CDS |
| CCACCAGTCAATGATAATTT+GGG | 0.402587 | 8.3:-28891655 | None:intergenic |
| GCATCGTATACCAAATCTTC+AGG | 0.409274 | 8.3:-28887853 | None:intergenic |
| GAGAATAACGGCGAATGAAT+CGG | 0.409910 | 8.3:+28887921 | MS.gene27212:CDS |
| TGAATCGGTGGTTGAAGATT+GGG | 0.416553 | 8.3:+28887936 | MS.gene27212:CDS |
| TGATGGTACTATTTATTTCA+CGG | 0.417335 | 8.3:+28890399 | MS.gene27212:CDS |
| TTTGGTATACGATGCTGCTT+TGG | 0.426280 | 8.3:+28887861 | MS.gene27212:CDS |
| CGCATGTTCTTGTTAAGTAA+AGG | 0.427288 | 8.3:-28887790 | None:intergenic |
| ATTTAAATTGTAGGTAGAGC+AGG | 0.441077 | 8.3:-28891754 | None:intergenic |
| TGAATGTTATCAGGCATGCC+AGG | 0.449090 | 8.3:-28891122 | None:intergenic |
| ATATCAAGACGTATTACAAA+AGG | 0.451664 | 8.3:-28891721 | None:intergenic |
| TTCCCCTCGACAAGCTAAAC+CGG | 0.460617 | 8.3:+28887752 | MS.gene27212:CDS |
| AGAGACCTCTACATTCCTAA+TGG | 0.460761 | 8.3:+28890535 | MS.gene27212:CDS |
| AGGTGGAAGACCACTTGGTT+TGG | 0.461808 | 8.3:+28887966 | MS.gene27212:CDS |
| TATGTCCAGTTCAGAAGAAA+AGG | 0.462483 | 8.3:-28891500 | None:intergenic |
| CCCTTTCATTAGGAAGGCTC+TGG | 0.465331 | 8.3:+28891534 | MS.gene27212:CDS |
| AGGAGTTATCACTGTGGACT+TGG | 0.473224 | 8.3:+28891603 | MS.gene27212:CDS |
| CCTGATAACATTCATTATGA+TGG | 0.474172 | 8.3:+28891131 | MS.gene27212:CDS |
| TTGCCTCAGCGGTTCTCTAC+CGG | 0.481680 | 8.3:+28887704 | MS.gene27212:CDS |
| TTGGTATACGATGCTGCTTT+GGG | 0.482809 | 8.3:+28887862 | MS.gene27212:CDS |
| TCTCTACCGGCTCGACCCAT+TGG | 0.483164 | 8.3:+28887717 | MS.gene27212:CDS |
| TTTATACTGGCTGTGTAGAT+GGG | 0.489254 | 8.3:+28887890 | MS.gene27212:CDS |
| CCGGCTCGACCCATTGGAAC+CGG | 0.495600 | 8.3:+28887723 | MS.gene27212:CDS |
| AAGTAAAGGAACGGTTATAG+TGG | 0.496018 | 8.3:-28887776 | None:intergenic |
| GATCCCAAATTATCATTGAC+TGG | 0.505104 | 8.3:+28891652 | MS.gene27212:CDS |
| TGACTGGTGGGATAAAGATT+GGG | 0.506223 | 8.3:+28891668 | MS.gene27212:CDS |
| AACACAGGTGGAAGACCACT+TGG | 0.510446 | 8.3:+28887961 | MS.gene27212:CDS |
| TATTGTTGCAGACGCAGATA+AGG | 0.510752 | 8.3:+28888011 | MS.gene27212:CDS |
| GCCAGAGCCTTCCTAATGAA+AGG | 0.517627 | 8.3:-28891535 | None:intergenic |
| TCTGTCCTAGAAATATTAGA+AGG | 0.518415 | 8.3:+28890451 | MS.gene27212:CDS |
| TAAAATTCAAAGTAACAGAT+GGG | 0.518625 | 8.3:+28890362 | MS.gene27212:CDS |
| CCAAATTATCATTGACTGGT+GGG | 0.519652 | 8.3:+28891656 | MS.gene27212:CDS |
| GTACTTGCGACTGAGATTGA+TGG | 0.522065 | 8.3:+28890337 | MS.gene27212:CDS |
| TTGTCGAGGGGAAAATGAAC+CGG | 0.522550 | 8.3:-28887742 | None:intergenic |
| CAAATACCCTTTCATTAGGA+AGG | 0.525588 | 8.3:+28891528 | MS.gene27212:CDS |
| CTAAAATTCAAAGTAACAGA+TGG | 0.528363 | 8.3:+28890361 | MS.gene27212:CDS |
| GGAAAATGAACCGGTTCCAA+TGG | 0.529351 | 8.3:-28887733 | None:intergenic |
| CTCACCAGATCAAAATTTCG+TGG | 0.532465 | 8.3:+28890567 | MS.gene27212:CDS |
| ATATTAGAAGGAAACCCTAA+TGG | 0.538643 | 8.3:+28890463 | MS.gene27212:CDS |
| TATCAAGACGTATTACAAAA+GGG | 0.542456 | 8.3:-28891720 | None:intergenic |
| CCAGAGCCTTCCTAATGAAA+GGG | 0.547179 | 8.3:-28891534 | None:intergenic |
| GGACATGGGCAATACTGGAT+TGG | 0.547757 | 8.3:+28891152 | MS.gene27212:CDS |
| GAAAATGAACCGGTTCCAAT+GGG | 0.552787 | 8.3:-28887732 | None:intergenic |
| CCGGTTCCAATGGGTCGAGC+CGG | 0.554679 | 8.3:-28887723 | None:intergenic |
| GTTCTTGTTAAGTAAAGGAA+CGG | 0.556371 | 8.3:-28887785 | None:intergenic |
| AGTCTGAATTTGTCAAAGAA+CGG | 0.559155 | 8.3:+28891580 | MS.gene27212:CDS |
| GTAGAGGTCTCTGAGTAGTA+GGG | 0.566551 | 8.3:-28890524 | None:intergenic |
| AAGGAACGGTTATAGTGGAC+CGG | 0.567519 | 8.3:-28887771 | None:intergenic |
| CCCAGTTATTATTGCCTCAG+CGG | 0.567615 | 8.3:+28887693 | MS.gene27212:CDS |
| GTTATCACTGTGGACTTGGA+AGG | 0.570869 | 8.3:+28891607 | MS.gene27212:CDS |
| TAGAAGGAAACCCTAATGGT+AGG | 0.571514 | 8.3:+28890467 | MS.gene27212:CDS |
| GGACCGGTTTAGCTTGTCGA+GGG | 0.573379 | 8.3:-28887755 | None:intergenic |
| CCCAAATTATCATTGACTGG+TGG | 0.579731 | 8.3:+28891655 | MS.gene27212:CDS |
| ATACTGGCTGTGTAGATGGG+TGG | 0.587528 | 8.3:+28887893 | MS.gene27212:CDS |
| GAATGTTATCAGGCATGCCA+GGG | 0.588881 | 8.3:-28891121 | None:intergenic |
| AACATTCATTATGATGGACA+TGG | 0.593918 | 8.3:+28891137 | MS.gene27212:CDS |
| ATTGGGAATCACTTATACTG+TGG | 0.599269 | 8.3:+28891685 | MS.gene27212:CDS |
| CCGCTGAGGCAATAATAACT+GGG | 0.609118 | 8.3:-28887693 | None:intergenic |
| TTCATCTAAATACTCATACA+AGG | 0.609469 | 8.3:+28890426 | MS.gene27212:CDS |
| TGGACCGGTTTAGCTTGTCG+AGG | 0.636901 | 8.3:-28887756 | None:intergenic |
| GAAGATTGGGTTAACACAGG+TGG | 0.640222 | 8.3:+28887949 | MS.gene27212:CDS |
| CAACTCCATTAGGAATGTAG+AGG | 0.642293 | 8.3:-28890540 | None:intergenic |
| GTTGAAGATTGGGTTAACAC+AGG | 0.642716 | 8.3:+28887946 | MS.gene27212:CDS |
| TGGGTGGATTAAGAGAATAA+CGG | 0.643809 | 8.3:+28887909 | MS.gene27212:CDS |
| ACATTCATTATGATGGACAT+GGG | 0.646294 | 8.3:+28891138 | MS.gene27212:CDS |
| CTGAATTTGTCAAAGAACGG+AGG | 0.657045 | 8.3:+28891583 | MS.gene27212:CDS |
| GGGGTTGATGTAGCACATGA+TGG | 0.659959 | 8.3:+28890382 | MS.gene27212:CDS |
| CCATCAAAAGCCAAACCAAG+TGG | 0.660290 | 8.3:-28887976 | None:intergenic |
| GACCGGTTTAGCTTGTCGAG+GGG | 0.662587 | 8.3:-28887754 | None:intergenic |
| GGGAGAATAATAGCTATGAA+CGG | 0.662624 | 8.3:-28887673 | None:intergenic |
| AAAATTCAAAGTAACAGATG+GGG | 0.664566 | 8.3:+28890363 | MS.gene27212:CDS |
| ATACTGGATTGGAATAGCCA+CGG | 0.680040 | 8.3:+28891163 | MS.gene27212:CDS |
| AATAACGGCGAATGAATCGG+TGG | 0.688503 | 8.3:+28887924 | MS.gene27212:CDS |
| TGTTATCAGGCATGCCAGGG+AGG | 0.693601 | 8.3:-28891118 | None:intergenic |
| TGCAAGAAATATTACATACG+TGG | 0.720518 | 8.3:+28891062 | MS.gene27212:CDS |
| GAGCCGGTAGAGAACCGCTG+AGG | 0.754438 | 8.3:-28887707 | None:intergenic |
| GAACGGAGGAGTTATCACTG+TGG | 0.783679 | 8.3:+28891597 | MS.gene27212:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAAATTTATTAACTTTTG+GGG | - | chr8.3:28889940-28889959 | None:intergenic | 10.0% |
| !!! | AATAGATTTGTTATTTTAAT+AGG | - | chr8.3:28888266-28888285 | None:intergenic | 10.0% |
| !!! | ACAATTATAAATATTTTGAA+TGG | + | chr8.3:28888429-28888448 | MS.gene27212:intron | 10.0% |
| !!! | ACTCTAATTTATATTTTTTT+TGG | - | chr8.3:28888871-28888890 | None:intergenic | 10.0% |
| !!! | TAAAATATTTTAATGTGTTT+TGG | - | chr8.3:28890924-28890943 | None:intergenic | 10.0% |
| !! | AAAATAATCTATAAGAACAT+AGG | - | chr8.3:28890165-28890184 | None:intergenic | 15.0% |
| !! | AATACAAATAAAAAAAGGTT+TGG | - | chr8.3:28889272-28889291 | None:intergenic | 15.0% |
| !! | ACAATTAAAACATGTTATAT+AGG | + | chr8.3:28888524-28888543 | MS.gene27212:intron | 15.0% |
| !! | ACACAAATACAAATAAAAAA+AGG | - | chr8.3:28889277-28889296 | None:intergenic | 15.0% |
| !! | ACTTTGCATAAATATTTATA+CGG | - | chr8.3:28888908-28888927 | None:intergenic | 15.0% |
| !! | ATACAAATAAAAAAAGGTTT+GGG | - | chr8.3:28889271-28889290 | None:intergenic | 15.0% |
| !! | TAATTTAATGATATGGAATA+GGG | + | chr8.3:28890280-28890299 | MS.gene27212:intron | 15.0% |
| !! | TATATAAACCAAACTATATA+GGG | - | chr8.3:28890869-28890888 | None:intergenic | 15.0% |
| !! | TGTATAATCTAAGAAAATTA+TGG | + | chr8.3:28889827-28889846 | MS.gene27212:intron | 15.0% |
| !! | TTAATTTAATGATATGGAAT+AGG | + | chr8.3:28890279-28890298 | MS.gene27212:intron | 15.0% |
| !! | TTATATAAACCAAACTATAT+AGG | - | chr8.3:28890870-28890889 | None:intergenic | 15.0% |
| !!! | AAAAAAATAACTTGTATCTA+CGG | + | chr8.3:28889488-28889507 | MS.gene27212:intron | 15.0% |
| !!! | AAATTCAGTTGTTTTTTTTT+TGG | - | chr8.3:28888189-28888208 | None:intergenic | 15.0% |
| !!! | AATTCAGTTGTTTTTTTTTT+GGG | - | chr8.3:28888188-28888207 | None:intergenic | 15.0% |
| !!! | ACATTTCATTTAATTTATGT+CGG | - | chr8.3:28889034-28889053 | None:intergenic | 15.0% |
| !!! | CTAAATTTTTTCTTTCTTTA+AGG | + | chr8.3:28888093-28888112 | MS.gene27212:intron | 15.0% |
| !!! | CTCTTTTTTTTTTTTTTTGA+GGG | - | chr8.3:28888823-28888842 | None:intergenic | 15.0% |
| !!! | TCTCTTTTTTTTTTTTTTTG+AGG | - | chr8.3:28888824-28888843 | None:intergenic | 15.0% |
| !!! | TGGACTTATTTTAATTTTAT+GGG | + | chr8.3:28891020-28891039 | MS.gene27212:intron | 15.0% |
| !!! | TGTTAAAGAATTTTTGTTTA+GGG | + | chr8.3:28890012-28890031 | MS.gene27212:intron | 15.0% |
| !!! | TTATTTCAAGATTCTTTTTA+AGG | - | chr8.3:28888713-28888732 | None:intergenic | 15.0% |
| !!! | TTGGACTTATTTTAATTTTA+TGG | + | chr8.3:28891019-28891038 | MS.gene27212:intron | 15.0% |
| !!! | TTGTTAAAGAATTTTTGTTT+AGG | + | chr8.3:28890011-28890030 | MS.gene27212:intron | 15.0% |
| !!! | TTTATTTTTTCCAAATTTTG+AGG | - | chr8.3:28889469-28889488 | None:intergenic | 15.0% |
| !! | AAATAAATTTCCATCAAACT+AGG | + | chr8.3:28890753-28890772 | MS.gene27212:intron | 20.0% |
| !! | AAATATAAATTAGAGTGCAA+TGG | + | chr8.3:28888875-28888894 | MS.gene27212:intron | 20.0% |
| !! | AATAAATTTCCATCAAACTA+GGG | + | chr8.3:28890754-28890773 | MS.gene27212:intron | 20.0% |
| !! | ACCTTAAAAAAAACCTAAAT+TGG | - | chr8.3:28891384-28891403 | None:intergenic | 20.0% |
| !! | TAAAATTCAAAGTAACAGAT+GGG | + | chr8.3:28890362-28890381 | MS.gene27212:CDS | 20.0% |
| !! | TAAAATTGTCAAGAATACAA+CGG | + | chr8.3:28889713-28889732 | MS.gene27212:intron | 20.0% |
| !! | TTAATTGTATTCATTTGTAG+AGG | - | chr8.3:28888512-28888531 | None:intergenic | 20.0% |
| !!! | ACATGTTTTGATATAAATGT+TGG | + | chr8.3:28888036-28888055 | MS.gene27212:intron | 20.0% |
| !!! | ATATTTTTTTTGGTACAACT+GGG | - | chr8.3:28888861-28888880 | None:intergenic | 20.0% |
| !!! | ATGTGTTTTGGAAATTTTTA+TGG | - | chr8.3:28890912-28890931 | None:intergenic | 20.0% |
| !!! | GTTAAAGAATTTTTGTTTAG+GGG | + | chr8.3:28890013-28890032 | MS.gene27212:intron | 20.0% |
| !!! | GTTATTTCAAGACTTAAAAA+AGG | - | chr8.3:28888572-28888591 | None:intergenic | 20.0% |
| !!! | TAGATTTTAGAATACGAATA+GGG | + | chr8.3:28890942-28890961 | MS.gene27212:intron | 20.0% |
| !!! | TATATTTTTTTTGGTACAAC+TGG | - | chr8.3:28888862-28888881 | None:intergenic | 20.0% |
| !!! | TATTACAAAAGGGTATAAAA+TGG | - | chr8.3:28891713-28891732 | None:intergenic | 20.0% |
| !!! | TCCAATTTAGGTTTTTTTTA+AGG | + | chr8.3:28891380-28891399 | MS.gene27212:intron | 20.0% |
| !!! | TTAGATTTTAGAATACGAAT+AGG | + | chr8.3:28890941-28890960 | MS.gene27212:intron | 20.0% |
| !!! | TTTCTTTCTTTAAGGAAAAA+AGG | + | chr8.3:28888101-28888120 | MS.gene27212:intron | 20.0% |
| ! | AAAATTCAAAGTAACAGATG+GGG | + | chr8.3:28890363-28890382 | MS.gene27212:CDS | 25.0% |
| ! | AAATCTATTTCAATGCATCA+CGG | + | chr8.3:28888277-28888296 | MS.gene27212:intron | 25.0% |
| ! | AAGAAAAACTAAAACAATCC+TGG | - | chr8.3:28888144-28888163 | None:intergenic | 25.0% |
| ! | ACAATTCTAAATCGTTTAAC+CGG | - | chr8.3:28888360-28888379 | None:intergenic | 25.0% |
| ! | ACACGATAACAAAATTTGAT+TGG | - | chr8.3:28888934-28888953 | None:intergenic | 25.0% |
| ! | AGAAAAACTAAAACAATCCT+GGG | - | chr8.3:28888143-28888162 | None:intergenic | 25.0% |
| ! | ATAAATTTCCATCAAACTAG+GGG | + | chr8.3:28890755-28890774 | MS.gene27212:intron | 25.0% |
| ! | ATATCAAGACGTATTACAAA+AGG | - | chr8.3:28891724-28891743 | None:intergenic | 25.0% |
| ! | ATTGTCAATTACACATTAAC+AGG | + | chr8.3:28889570-28889589 | MS.gene27212:intron | 25.0% |
| ! | CTAAAATTCAAAGTAACAGA+TGG | + | chr8.3:28890361-28890380 | MS.gene27212:CDS | 25.0% |
| ! | TAATTTATGTCGGAAAATGT+AGG | - | chr8.3:28889024-28889043 | None:intergenic | 25.0% |
| ! | TACTTGTACTAATACTAAGA+AGG | - | chr8.3:28890627-28890646 | None:intergenic | 25.0% |
| ! | TATCAAGACGTATTACAAAA+GGG | - | chr8.3:28891723-28891742 | None:intergenic | 25.0% |
| ! | TGATGGTACTATTTATTTCA+CGG | + | chr8.3:28890399-28890418 | MS.gene27212:CDS | 25.0% |
| ! | TTCATCTAAATACTCATACA+AGG | + | chr8.3:28890426-28890445 | MS.gene27212:CDS | 25.0% |
| ! | TTTCATGACTTAAACAAAGA+TGG | - | chr8.3:28888684-28888703 | None:intergenic | 25.0% |
| !! | TCTTTAAGGAAAAAAGGTTA+AGG | + | chr8.3:28888107-28888126 | MS.gene27212:intron | 25.0% |
| !!! | AAAGTGCTAACTATATGTTT+TGG | + | chr8.3:28891432-28891451 | MS.gene27212:intron | 25.0% |
| !!! | ATTTTAATAGGTTCGTTTGA+GGG | - | chr8.3:28888254-28888273 | None:intergenic | 25.0% |
| !!! | ATTTTGACTAATCATACATG+AGG | - | chr8.3:28890119-28890138 | None:intergenic | 25.0% |
| !!! | CATCTGTTACTTTGAATTTT+AGG | - | chr8.3:28890363-28890382 | None:intergenic | 25.0% |
| !!! | GAATATGTTTTTTCTGCAAA+TGG | + | chr8.3:28888063-28888082 | MS.gene27212:intron | 25.0% |
| !!! | TATTTTAATAGGTTCGTTTG+AGG | - | chr8.3:28888255-28888274 | None:intergenic | 25.0% |
| !!! | TGTTGTTGTTTGTGTATTTT+TGG | + | chr8.3:28891473-28891492 | MS.gene27212:intron | 25.0% |
| !!! | TTTATTAACTTTTGGGGATA+TGG | - | chr8.3:28889934-28889953 | None:intergenic | 25.0% |
| !!! | TTTTTTTGGGTCAATTCAAT+GGG | - | chr8.3:28888175-28888194 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGGGTCAATTCAA+TGG | - | chr8.3:28888176-28888195 | None:intergenic | 25.0% |
| AAAGTTGTTTGATACCGTTA+AGG | - | chr8.3:28888327-28888346 | None:intergenic | 30.0% | |
| AACTCAAAAACCTACCATTA+GGG | - | chr8.3:28890480-28890499 | None:intergenic | 30.0% | |
| AAGAATGTGTCATCCAATTT+AGG | + | chr8.3:28891368-28891387 | MS.gene27212:intron | 30.0% | |
| ACAAGTTACATTATCATGCA+TGG | + | chr8.3:28890218-28890237 | MS.gene27212:intron | 30.0% | |
| AGCATGTAATTCTTCCAAAT+AGG | + | chr8.3:28890081-28890100 | MS.gene27212:intron | 30.0% | |
| AGTCTGAATTTGTCAAAGAA+CGG | + | chr8.3:28891580-28891599 | MS.gene27212:CDS | 30.0% | |
| ATATTAGAAGGAAACCCTAA+TGG | + | chr8.3:28890463-28890482 | MS.gene27212:CDS | 30.0% | |
| CCAACAACATTTAGAAATGT+AGG | - | chr8.3:28891003-28891022 | None:intergenic | 30.0% | |
| CCAACTAAAACATGTTATAG+AGG | + | chr8.3:28888640-28888659 | MS.gene27212:intron | 30.0% | |
| CCATCATAATGAATGTTATC+AGG | - | chr8.3:28891134-28891153 | None:intergenic | 30.0% | |
| CCTACATTTCTAAATGTTGT+TGG | + | chr8.3:28891000-28891019 | MS.gene27212:intron | 30.0% | |
| CCTGATAACATTCATTATGA+TGG | + | chr8.3:28891131-28891150 | MS.gene27212:CDS | 30.0% | |
| CTTGAGATGAACTATAAGTA+GGG | - | chr8.3:28889762-28889781 | None:intergenic | 30.0% | |
| GGTTTCCTTCTAATATTTCT+AGG | - | chr8.3:28890459-28890478 | None:intergenic | 30.0% | |
| GTTCTTGTTAAGTAAAGGAA+CGG | - | chr8.3:28887788-28887807 | None:intergenic | 30.0% | |
| TAAATTTCCATCAAACTAGG+GGG | + | chr8.3:28890756-28890775 | MS.gene27212:intron | 30.0% | |
| TAACTCAAAAACCTACCATT+AGG | - | chr8.3:28890481-28890500 | None:intergenic | 30.0% | |
| TACTCAAATACCCTTTCATT+AGG | + | chr8.3:28891524-28891543 | MS.gene27212:CDS | 30.0% | |
| TCATAAATAGTCTCCATACA+AGG | + | chr8.3:28891403-28891422 | MS.gene27212:intron | 30.0% | |
| TCTGGCAATCATCATAAAAA+AGG | + | chr8.3:28891552-28891571 | MS.gene27212:CDS | 30.0% | |
| TCTGTCCTAGAAATATTAGA+AGG | + | chr8.3:28890451-28890470 | MS.gene27212:CDS | 30.0% | |
| TCTTGAGATGAACTATAAGT+AGG | - | chr8.3:28889763-28889782 | None:intergenic | 30.0% | |
| TGCAAGAAATATTACATACG+TGG | + | chr8.3:28891062-28891081 | MS.gene27212:CDS | 30.0% | |
| ! | ATTGACTTCTAATTATACCG+TGG | - | chr8.3:28891183-28891202 | None:intergenic | 30.0% |
| ! | ATTGGATGACACATTCTTTT+TGG | - | chr8.3:28891366-28891385 | None:intergenic | 30.0% |
| ! | GGTATTTTGTAGTTCCTATT+TGG | - | chr8.3:28890098-28890117 | None:intergenic | 30.0% |
| ! | GGTGTGCTTTATTGAAATTT+GGG | + | chr8.3:28890777-28890796 | MS.gene27212:intron | 30.0% |
| ! | TATGGAGTGTTTATGCTATT+CGG | - | chr8.3:28890894-28890913 | None:intergenic | 30.0% |
| ! | TTAGAAGTATGCAAGTAACA+AGG | - | chr8.3:28890809-28890828 | None:intergenic | 30.0% |
| ! | TTTTAATAGGTTCGTTTGAG+GGG | - | chr8.3:28888253-28888272 | None:intergenic | 30.0% |
| !! | AACACAAGAAAAAGGTGTTT+AGG | + | chr8.3:28889110-28889129 | MS.gene27212:intron | 30.0% |
| !! | AACATTCATTATGATGGACA+TGG | + | chr8.3:28891137-28891156 | MS.gene27212:CDS | 30.0% |
| !! | ACATTCATTATGATGGACAT+GGG | + | chr8.3:28891138-28891157 | MS.gene27212:CDS | 30.0% |
| !!! | CCTCTATAACATGTTTTAGT+TGG | - | chr8.3:28888643-28888662 | None:intergenic | 30.0% |
| !!! | TACTAAATGTCATTTTCCGT+AGG | + | chr8.3:28889522-28889541 | MS.gene27212:intron | 30.0% |
| !!! | TTCAAGACTTTGTTTTTCGA+AGG | - | chr8.3:28888597-28888616 | None:intergenic | 30.0% |
| AAGGTGATGAACAACTTACA+TGG | - | chr8.3:28890608-28890627 | None:intergenic | 35.0% | |
| AAGTAAAGGAACGGTTATAG+TGG | - | chr8.3:28887779-28887798 | None:intergenic | 35.0% | |
| ACGGCATAAAATGAGTGTAA+TGG | + | chr8.3:28888296-28888315 | MS.gene27212:intron | 35.0% | |
| ACTTAAAGGGCCTCAAAATT+TGG | + | chr8.3:28889456-28889475 | MS.gene27212:intron | 35.0% | |
| ACTTGTCACAATTTAGTCCA+AGG | - | chr8.3:28890204-28890223 | None:intergenic | 35.0% | |
| AGATTAGATGAGTGAATGAG+TGG | - | chr8.3:28890252-28890271 | None:intergenic | 35.0% | |
| ATTGGGAATCACTTATACTG+TGG | + | chr8.3:28891685-28891704 | MS.gene27212:CDS | 35.0% | |
| CAAATACCCTTTCATTAGGA+AGG | + | chr8.3:28891528-28891547 | MS.gene27212:CDS | 35.0% | |
| CAATTCTAGACTTTCACCTA+CGG | - | chr8.3:28889541-28889560 | None:intergenic | 35.0% | |
| CCACCAGTCAATGATAATTT+GGG | - | chr8.3:28891658-28891677 | None:intergenic | 35.0% | |
| CGCATGTTCTTGTTAAGTAA+AGG | - | chr8.3:28887793-28887812 | None:intergenic | 35.0% | |
| CTAGTTAAATATGCGAGCAA+TGG | - | chr8.3:28889638-28889657 | None:intergenic | 35.0% | |
| CTTAACAAGAACATGCGATT+AGG | + | chr8.3:28887796-28887815 | MS.gene27212:CDS | 35.0% | |
| GATCCCAAATTATCATTGAC+TGG | + | chr8.3:28891652-28891671 | MS.gene27212:CDS | 35.0% | |
| GATTAGATGAGTGAATGAGT+GGG | - | chr8.3:28890251-28890270 | None:intergenic | 35.0% | |
| GGGAGAATAATAGCTATGAA+CGG | - | chr8.3:28887676-28887695 | None:intergenic | 35.0% | |
| GTAAGTGTCTATTTGTCTGT+GGG | + | chr8.3:28889595-28889614 | MS.gene27212:intron | 35.0% | |
| GTCAATTACACATTAACAGG+AGG | + | chr8.3:28889573-28889592 | MS.gene27212:intron | 35.0% | |
| GTGCGAGAAAATCATAAGAT+GGG | + | chr8.3:28890966-28890985 | MS.gene27212:intron | 35.0% | |
| TAGATGTTTGTCACTCTAAG+TGG | + | chr8.3:28889662-28889681 | MS.gene27212:intron | 35.0% | |
| TATGTCCAGTTCAGAAGAAA+AGG | - | chr8.3:28891503-28891522 | None:intergenic | 35.0% | |
| TCTTTCTCGTGTTAAATCCT+TGG | + | chr8.3:28890184-28890203 | MS.gene27212:intron | 35.0% | |
| TGGTCACAAACACAAGAAAA+AGG | + | chr8.3:28889102-28889121 | MS.gene27212:intron | 35.0% | |
| ! | ACCGATTCACACACATAAAA+GGG | + | chr8.3:28891319-28891338 | MS.gene27212:intron | 35.0% |
| ! | CCAAATTATCATTGACTGGT+GGG | + | chr8.3:28891656-28891675 | MS.gene27212:CDS | 35.0% |
| ! | GCACTTTTCTTTTCCTTGTA+TGG | - | chr8.3:28891419-28891438 | None:intergenic | 35.0% |
| ! | GGGTGTGCTTTATTGAAATT+TGG | + | chr8.3:28890776-28890795 | MS.gene27212:intron | 35.0% |
| ! | TCCCTTTTATGTGTGTGAAT+CGG | - | chr8.3:28891323-28891342 | None:intergenic | 35.0% |
| ! | TTTATACTGGCTGTGTAGAT+GGG | + | chr8.3:28887890-28887909 | MS.gene27212:CDS | 35.0% |
| !! | AAGACCACGAAATTTTGATC+TGG | - | chr8.3:28890574-28890593 | None:intergenic | 35.0% |
| !! | ATTTTATGGGCTAATGTTGC+AGG | + | chr8.3:28891033-28891052 | MS.gene27212:intron | 35.0% |
| !! | GAGGTATTTTACGAGTTGAA+TGG | - | chr8.3:28888493-28888512 | None:intergenic | 35.0% |
| !! | GTATTTTACGAGTTGAATGG+TGG | - | chr8.3:28888490-28888509 | None:intergenic | 35.0% |
| !! | TACCGATTCACACACATAAA+AGG | + | chr8.3:28891318-28891337 | MS.gene27212:intron | 35.0% |
| !! | TGGGTGGATTAAGAGAATAA+CGG | + | chr8.3:28887909-28887928 | MS.gene27212:CDS | 35.0% |
| !!! | GGTACCATTTTTTGAAGGAA+GGG | - | chr8.3:28889855-28889874 | None:intergenic | 35.0% |
| !!! | GTTGTTTGTGTATTTTTGGC+AGG | + | chr8.3:28891477-28891496 | MS.gene27212:intron | 35.0% |
| AACAACTTTGCACACACAAC+CGG | + | chr8.3:28888338-28888357 | MS.gene27212:intron | 40.0% | |
| AACTATAAGTAGGGCCGTTT+AGG | - | chr8.3:28889753-28889772 | None:intergenic | 40.0% | |
| ACCAAGAAAGAATTTCTCCG+TGG | - | chr8.3:28889086-28889105 | None:intergenic | 40.0% | |
| AGAATTTCTCCGTGGGAAAA+TGG | - | chr8.3:28889078-28889097 | None:intergenic | 40.0% | |
| AGAGACCTCTACATTCCTAA+TGG | + | chr8.3:28890535-28890554 | MS.gene27212:CDS | 40.0% | |
| AGCCTCCTAATTGTCCTAAA+CGG | + | chr8.3:28889736-28889755 | MS.gene27212:intron | 40.0% | |
| AGGATCTGAAAAAGTTGCAG+AGG | + | chr8.3:28887816-28887835 | MS.gene27212:CDS | 40.0% | |
| AGTTCTTGGACCTGAAGATT+TGG | + | chr8.3:28887843-28887862 | MS.gene27212:CDS | 40.0% | |
| ATGAATCGGTGGTTGAAGAT+TGG | + | chr8.3:28887935-28887954 | MS.gene27212:CDS | 40.0% | |
| CAACTCCATTAGGAATGTAG+AGG | - | chr8.3:28890543-28890562 | None:intergenic | 40.0% | |
| CACATGGCCTCAAACTTAAA+GGG | + | chr8.3:28889443-28889462 | MS.gene27212:intron | 40.0% | |
| CCAAGAAAGAATTTCTCCGT+GGG | - | chr8.3:28889085-28889104 | None:intergenic | 40.0% | |
| CCCACCAGTCAATGATAATT+TGG | - | chr8.3:28891659-28891678 | None:intergenic | 40.0% | |
| CGTGCGAGAAAATCATAAGA+TGG | + | chr8.3:28890965-28890984 | MS.gene27212:intron | 40.0% | |
| CTCACCAGATCAAAATTTCG+TGG | + | chr8.3:28890567-28890586 | MS.gene27212:CDS | 40.0% | |
| CTGAATTTGTCAAAGAACGG+AGG | + | chr8.3:28891583-28891602 | MS.gene27212:CDS | 40.0% | |
| GAAATCCACATAGAGAACGT+GGG | - | chr8.3:28889320-28889339 | None:intergenic | 40.0% | |
| GAATTTCTCCGTGGGAAAAT+GGG | - | chr8.3:28889077-28889096 | None:intergenic | 40.0% | |
| GAGAATAACGGCGAATGAAT+CGG | + | chr8.3:28887921-28887940 | MS.gene27212:CDS | 40.0% | |
| GCATCGTATACCAAATCTTC+AGG | - | chr8.3:28887856-28887875 | None:intergenic | 40.0% | |
| GGATCATAGTAGTGTGTAGT+AGG | - | chr8.3:28891637-28891656 | None:intergenic | 40.0% | |
| GGATCTGAAAAAGTTGCAGA+GGG | + | chr8.3:28887817-28887836 | MS.gene27212:CDS | 40.0% | |
| GGTAAGTGTCTATTTGTCTG+TGG | + | chr8.3:28889594-28889613 | MS.gene27212:intron | 40.0% | |
| GTTAAGGAAATTACTGTCCC+AGG | + | chr8.3:28888123-28888142 | MS.gene27212:intron | 40.0% | |
| GTTGAAGATTGGGTTAACAC+AGG | + | chr8.3:28887946-28887965 | MS.gene27212:CDS | 40.0% | |
| TACATACGTGGCACGAAAAA+AGG | + | chr8.3:28891074-28891093 | MS.gene27212:CDS | 40.0% | |
| TAGAAGGAAACCCTAATGGT+AGG | + | chr8.3:28890467-28890486 | MS.gene27212:CDS | 40.0% | |
| TATTGTTGCAGACGCAGATA+AGG | + | chr8.3:28888011-28888030 | MS.gene27212:CDS | 40.0% | |
| TGAAATCCACATAGAGAACG+TGG | - | chr8.3:28889321-28889340 | None:intergenic | 40.0% | |
| TGAATCGGTGGTTGAAGATT+GGG | + | chr8.3:28887936-28887955 | MS.gene27212:CDS | 40.0% | |
| TGACTGGTGGGATAAAGATT+GGG | + | chr8.3:28891668-28891687 | MS.gene27212:CDS | 40.0% | |
| TTGACTGGTGGGATAAAGAT+TGG | + | chr8.3:28891667-28891686 | MS.gene27212:CDS | 40.0% | |
| ! | ATACTGGATTGGAATAGCCA+CGG | + | chr8.3:28891163-28891182 | MS.gene27212:CDS | 40.0% |
| ! | CCCAAATTATCATTGACTGG+TGG | + | chr8.3:28891655-28891674 | MS.gene27212:CDS | 40.0% |
| ! | GAAAATGAACCGGTTCCAAT+GGG | - | chr8.3:28887735-28887754 | None:intergenic | 40.0% |
| ! | GCTTTGGGTGTAGTTTATAC+TGG | + | chr8.3:28887877-28887896 | MS.gene27212:CDS | 40.0% |
| ! | GTTTATACTGGCTGTGTAGA+TGG | + | chr8.3:28887889-28887908 | MS.gene27212:CDS | 40.0% |
| ! | TTTGAGGCCCTTTAAGTTTG+AGG | - | chr8.3:28889453-28889472 | None:intergenic | 40.0% |
| ! | TTTGGTATACGATGCTGCTT+TGG | + | chr8.3:28887861-28887880 | MS.gene27212:CDS | 40.0% |
| !! | CAGAGTTTTGTGACTCATTG+TGG | + | chr8.3:28891249-28891268 | MS.gene27212:intron | 40.0% |
| !! | TTGGTATACGATGCTGCTTT+GGG | + | chr8.3:28887862-28887881 | MS.gene27212:CDS | 40.0% |
| !!! | AGGGTTGTCTTTTTTGTTGC+TGG | - | chr8.3:28890508-28890527 | None:intergenic | 40.0% |
| !!! | CTCAGGGTACCATTTTTTGA+AGG | - | chr8.3:28889860-28889879 | None:intergenic | 40.0% |
| !!! | GGGTACCATTTTTTGAAGGA+AGG | - | chr8.3:28889856-28889875 | None:intergenic | 40.0% |
| !!! | GGTTTGGCTTTTGATGGAAA+TGG | + | chr8.3:28887982-28888001 | MS.gene27212:CDS | 40.0% |
| AATAACGGCGAATGAATCGG+TGG | + | chr8.3:28887924-28887943 | MS.gene27212:CDS | 45.0% | |
| ACATAGAGAACGTGGGAAAG+AGG | - | chr8.3:28889313-28889332 | None:intergenic | 45.0% | |
| ACCGCTGAGGCAATAATAAC+TGG | - | chr8.3:28887697-28887716 | None:intergenic | 45.0% | |
| CCAGAGCCTTCCTAATGAAA+GGG | - | chr8.3:28891537-28891556 | None:intergenic | 45.0% | |
| CCATCAAAAGCCAAACCAAG+TGG | - | chr8.3:28887979-28887998 | None:intergenic | 45.0% | |
| CCCACGGAGAAATTCTTTCT+TGG | + | chr8.3:28889082-28889101 | MS.gene27212:intron | 45.0% | |
| CCCAGTTATTATTGCCTCAG+CGG | + | chr8.3:28887693-28887712 | MS.gene27212:CDS | 45.0% | |
| CCGCTGAGGCAATAATAACT+GGG | - | chr8.3:28887696-28887715 | None:intergenic | 45.0% | |
| GAAGATTGGGTTAACACAGG+TGG | + | chr8.3:28887949-28887968 | MS.gene27212:CDS | 45.0% | |
| GAATGTTATCAGGCATGCCA+GGG | - | chr8.3:28891124-28891143 | None:intergenic | 45.0% | |
| GCACATGGCCTCAAACTTAA+AGG | + | chr8.3:28889442-28889461 | MS.gene27212:intron | 45.0% | |
| GGTGCCCTTCCTTCAAAAAA+TGG | + | chr8.3:28889848-28889867 | MS.gene27212:intron | 45.0% | |
| GTACTTGCGACTGAGATTGA+TGG | + | chr8.3:28890337-28890356 | MS.gene27212:CDS | 45.0% | |
| GTAGAGGTCTCTGAGTAGTA+GGG | - | chr8.3:28890527-28890546 | None:intergenic | 45.0% | |
| TCTTTCCCACGTTCTCTATG+TGG | + | chr8.3:28889312-28889331 | MS.gene27212:intron | 45.0% | |
| TGAATGTTATCAGGCATGCC+AGG | - | chr8.3:28891125-28891144 | None:intergenic | 45.0% | |
| TGTAGAGGTCTCTGAGTAGT+AGG | - | chr8.3:28890528-28890547 | None:intergenic | 45.0% | |
| TTGTCGAGGGGAAAATGAAC+CGG | - | chr8.3:28887745-28887764 | None:intergenic | 45.0% | |
| ! | GATATCGTCCCATTTTCCCA+CGG | + | chr8.3:28889066-28889085 | MS.gene27212:intron | 45.0% |
| ! | GGAAAATGAACCGGTTCCAA+TGG | - | chr8.3:28887736-28887755 | None:intergenic | 45.0% |
| ! | TAGGGCCGTTTAGGACAATT+AGG | - | chr8.3:28889744-28889763 | None:intergenic | 45.0% |
| !! | AAGGAACGGTTATAGTGGAC+CGG | - | chr8.3:28887774-28887793 | None:intergenic | 45.0% |
| !! | AATAACTAGCTTTGCAGCCC+CGG | + | chr8.3:28889366-28889385 | MS.gene27212:intron | 45.0% |
| !! | ATGATGGACATGGGCAATAC+TGG | + | chr8.3:28891147-28891166 | MS.gene27212:CDS | 45.0% |
| !! | GAAAAGTTTTGTGACCTCCC+TGG | + | chr8.3:28891104-28891123 | MS.gene27212:CDS | 45.0% |
| !!! | CCACTTGGTTTGGCTTTTGA+TGG | + | chr8.3:28887976-28887995 | MS.gene27212:CDS | 45.0% |
| !!! | ATTAATTTAATTTAATGATA+TGG | + | chr8.3:28890273-28890292 | MS.gene27212:intron | 5.0% |
| !!! | TAATAAATTTATTAACTTTT+GGG | - | chr8.3:28889941-28889960 | None:intergenic | 5.0% |
| !!! | TTAATAAATTTATTAACTTT+TGG | - | chr8.3:28889942-28889961 | None:intergenic | 5.0% |
| AACACAGGTGGAAGACCACT+TGG | + | chr8.3:28887961-28887980 | MS.gene27212:CDS | 50.0% | |
| AAGCACACCCCCTAGTTTGA+TGG | - | chr8.3:28890766-28890785 | None:intergenic | 50.0% | |
| AGGTGGAAGACCACTTGGTT+TGG | + | chr8.3:28887966-28887985 | MS.gene27212:CDS | 50.0% | |
| CCCTTTCATTAGGAAGGCTC+TGG | + | chr8.3:28891534-28891553 | MS.gene27212:CDS | 50.0% | |
| GCACCCATGACTTCTAGTCA+GGG | + | chr8.3:28889388-28889407 | MS.gene27212:intron | 50.0% | |
| GCCAGAGCCTTCCTAATGAA+AGG | - | chr8.3:28891538-28891557 | None:intergenic | 50.0% | |
| GGACATGGGCAATACTGGAT+TGG | + | chr8.3:28891152-28891171 | MS.gene27212:CDS | 50.0% | |
| GGTGAGACTGCAACTCCATT+AGG | - | chr8.3:28890553-28890572 | None:intergenic | 50.0% | |
| GTGTAATGGCGCTGCCTTAA+CGG | + | chr8.3:28888310-28888329 | MS.gene27212:intron | 50.0% | |
| GTTGCAGAGGGACAAGTTCT+TGG | + | chr8.3:28887829-28887848 | MS.gene27212:CDS | 50.0% | |
| TCCTGTCTTCTGTCCAAGAG+TGG | - | chr8.3:28889911-28889930 | None:intergenic | 50.0% | |
| TGACTAGAAGTCATGGGTGC+CGG | - | chr8.3:28889388-28889407 | None:intergenic | 50.0% | |
| TTCCCCTCGACAAGCTAAAC+CGG | + | chr8.3:28887752-28887771 | MS.gene27212:CDS | 50.0% | |
| ! | AAGTTTGAGGCCATGTGCCA+AGG | - | chr8.3:28889440-28889459 | None:intergenic | 50.0% |
| ! | AGTTTGAGGCCATGTGCCAA+GGG | - | chr8.3:28889439-28889458 | None:intergenic | 50.0% |
| ! | ATACTGGCTGTGTAGATGGG+TGG | + | chr8.3:28887893-28887912 | MS.gene27212:CDS | 50.0% |
| ! | GCAGGCCTTTTCTTCTGAAC+TGG | + | chr8.3:28891495-28891514 | MS.gene27212:intron | 50.0% |
| ! | GGCCGTTTAGGACAATTAGG+AGG | - | chr8.3:28889741-28889760 | None:intergenic | 50.0% |
| !! | GGGGTTGATGTAGCACATGA+TGG | + | chr8.3:28890382-28890401 | MS.gene27212:CDS | 50.0% |
| ATGGAAAGGGGGACAGCTCA+GGG | - | chr8.3:28889876-28889895 | None:intergenic | 55.0% | |
| CCCCTTTCCATCCACCATCA+GGG | + | chr8.3:28889885-28889904 | MS.gene27212:intron | 55.0% | |
| CGGCCCTGACTAGAAGTCAT+GGG | - | chr8.3:28889394-28889413 | None:intergenic | 55.0% | |
| CTCGCGCGCCCTATATAGTT+TGG | + | chr8.3:28890858-28890877 | MS.gene27212:intron | 55.0% | |
| GACTAGAAGTCATGGGTGCC+GGG | - | chr8.3:28889387-28889406 | None:intergenic | 55.0% | |
| GCCACTCTTGGACAGAAGAC+AGG | + | chr8.3:28889907-28889926 | MS.gene27212:intron | 55.0% | |
| GGCACCCATGACTTCTAGTC+AGG | + | chr8.3:28889387-28889406 | MS.gene27212:intron | 55.0% | |
| TCGGCCCTGACTAGAAGTCA+TGG | - | chr8.3:28889395-28889414 | None:intergenic | 55.0% | |
| TGTTATCAGGCATGCCAGGG+AGG | - | chr8.3:28891121-28891140 | None:intergenic | 55.0% | |
| TTGCCTCAGCGGTTCTCTAC+CGG | + | chr8.3:28887704-28887723 | MS.gene27212:CDS | 55.0% | |
| ! | ACTAGAAGTCATGGGTGCCG+GGG | - | chr8.3:28889386-28889405 | None:intergenic | 55.0% |
| ! | TTGGTGCTCTTGCACAGGGT+CGG | - | chr8.3:28889414-28889433 | None:intergenic | 55.0% |
| !! | CCCTGATGGTGGATGGAAAG+GGG | - | chr8.3:28889888-28889907 | None:intergenic | 55.0% |
| !! | CCTGATGGTGGATGGAAAGG+GGG | - | chr8.3:28889887-28889906 | None:intergenic | 55.0% |
| !! | GACCGGTTTAGCTTGTCGAG+GGG | - | chr8.3:28887757-28887776 | None:intergenic | 55.0% |
| !! | GCCCTGATGGTGGATGGAAA+GGG | - | chr8.3:28889889-28889908 | None:intergenic | 55.0% |
| !! | GGACCGGTTTAGCTTGTCGA+GGG | - | chr8.3:28887758-28887777 | None:intergenic | 55.0% |
| !! | GGTCTTGGTGCTCTTGCACA+GGG | - | chr8.3:28889418-28889437 | None:intergenic | 55.0% |
| !! | TGCAAGAGCACCAAGACCCT+TGG | + | chr8.3:28889420-28889439 | MS.gene27212:intron | 55.0% |
| !! | TGGACCGGTTTAGCTTGTCG+AGG | - | chr8.3:28887759-28887778 | None:intergenic | 55.0% |
| AGGCCATGTGCCAAGGGTCT+TGG | - | chr8.3:28889433-28889452 | None:intergenic | 60.0% | |
| AGGGCGCGCGAGAAATAGAC+AGG | - | chr8.3:28890850-28890869 | None:intergenic | 60.0% | |
| CCCCCTTTCCATCCACCATC+AGG | + | chr8.3:28889884-28889903 | MS.gene27212:intron | 60.0% | |
| CTGTCCAAGAGTGGCCCTGA+TGG | - | chr8.3:28889902-28889921 | None:intergenic | 60.0% | |
| GATGGAAAGGGGGACAGCTC+AGG | - | chr8.3:28889877-28889896 | None:intergenic | 60.0% | |
| GCACCAAGACCCTTGGCACA+TGG | + | chr8.3:28889427-28889446 | MS.gene27212:intron | 60.0% | |
| GGGCGCGCGAGAAATAGACA+GGG | - | chr8.3:28890849-28890868 | None:intergenic | 60.0% | |
| TCCAAGAGTGGCCCTGATGG+TGG | - | chr8.3:28889899-28889918 | None:intergenic | 60.0% | |
| TCCACCATCAGGGCCACTCT+TGG | + | chr8.3:28889895-28889914 | MS.gene27212:intron | 60.0% | |
| !! | AGAGTGGCCCTGATGGTGGA+TGG | - | chr8.3:28889895-28889914 | None:intergenic | 60.0% |
| !! | GGCCCTGATGGTGGATGGAA+AGG | - | chr8.3:28889890-28889909 | None:intergenic | 60.0% |
| !! | GGGTCTTGGTGCTCTTGCAC+AGG | - | chr8.3:28889419-28889438 | None:intergenic | 60.0% |
| !! | TCTCTACCGGCTCGACCCAT+TGG | + | chr8.3:28887717-28887736 | MS.gene27212:CDS | 60.0% |
| CCGGTTCCAATGGGTCGAGC+CGG | - | chr8.3:28887726-28887745 | None:intergenic | 65.0% | |
| GAGCCGGTAGAGAACCGCTG+AGG | - | chr8.3:28887710-28887729 | None:intergenic | 65.0% | |
| ! | CCGGCTCGACCCATTGGAAC+CGG | + | chr8.3:28887723-28887742 | MS.gene27212:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 28887619 | 28891774 | 28887619 | ID=MS.gene27212 |
| chr8.3 | mRNA | 28887619 | 28891774 | 28887619 | ID=MS.gene27212.t1;Parent=MS.gene27212 |
| chr8.3 | exon | 28887619 | 28888032 | 28887619 | ID=MS.gene27212.t1.exon1;Parent=MS.gene27212.t1 |
| chr8.3 | CDS | 28887619 | 28888032 | 28887619 | ID=cds.MS.gene27212.t1;Parent=MS.gene27212.t1 |
| chr8.3 | exon | 28890301 | 28890608 | 28890301 | ID=MS.gene27212.t1.exon2;Parent=MS.gene27212.t1 |
| chr8.3 | CDS | 28890301 | 28890608 | 28890301 | ID=cds.MS.gene27212.t1;Parent=MS.gene27212.t1 |
| chr8.3 | exon | 28891055 | 28891184 | 28891055 | ID=MS.gene27212.t1.exon3;Parent=MS.gene27212.t1 |
| chr8.3 | CDS | 28891055 | 28891184 | 28891055 | ID=cds.MS.gene27212.t1;Parent=MS.gene27212.t1 |
| chr8.3 | exon | 28891499 | 28891774 | 28891499 | ID=MS.gene27212.t1.exon4;Parent=MS.gene27212.t1 |
| chr8.3 | CDS | 28891499 | 28891774 | 28891499 | ID=cds.MS.gene27212.t1;Parent=MS.gene27212.t1 |
| Gene Sequence |
| Protein sequence |
