Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23776.t1 | XP_003629186.1 | 92.2 | 360 | 28 | 0 | 18 | 377 | 16 | 375 | 2.80E-193 | 684.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23776.t1 | Q9CAZ7 | 49.4 | 360 | 170 | 7 | 22 | 373 | 11 | 366 | 2.7e-96 | 353.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23776.t1 | G7LA71 | 92.2 | 360 | 28 | 0 | 18 | 377 | 16 | 375 | 2.0e-193 | 684.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene23776 | MS.gene85273 | PPI |
| MS.gene23776 | MS.gene61630 | PPI |
| MS.gene23776 | MS.gene052008 | PPI |
| MS.gene23776 | MS.gene037810 | PPI |
| MS.gene23776 | MS.gene27212 | PPI |
| MS.gene23776 | MS.gene017558 | PPI |
| MS.gene23776 | MS.gene017554 | PPI |
| MS.gene23776 | MS.gene032181 | PPI |
| MS.gene23776 | MS.gene66625 | PPI |
| MS.gene23776 | MS.gene23775 | PPI |
| MS.gene23776 | MS.gene034366 | PPI |
| MS.gene23776 | MS.gene017556 | PPI |
| MS.gene23776 | MS.gene037809 | PPI |
| MS.gene23776 | MS.gene98728 | PPI |
| MS.gene23776 | MS.gene23780 | PPI |
| MS.gene23776 | MS.gene35719 | PPI |
| MS.gene23776 | MS.gene061292 | PPI |
| MS.gene23776 | MS.gene017555 | PPI |
| MS.gene23776 | MS.gene27211 | PPI |
| MS.gene23776 | MS.gene059296 | PPI |
| MS.gene23776 | MS.gene27210 | PPI |
| MS.gene23776 | MS.gene23779 | PPI |
| MS.gene23776 | MS.gene037812 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23776.t1 | MTR_8g074270 | 91.777 | 377 | 29 | 1 | 1 | 377 | 1 | 375 | 0.0 | 712 |
| MS.gene23776.t1 | MTR_8g074170 | 88.859 | 377 | 40 | 1 | 1 | 377 | 1 | 375 | 0.0 | 688 |
| MS.gene23776.t1 | MTR_8g074210 | 86.472 | 377 | 49 | 1 | 1 | 377 | 1 | 375 | 0.0 | 666 |
| MS.gene23776.t1 | MTR_1g075865 | 96.262 | 107 | 4 | 0 | 169 | 275 | 7 | 113 | 7.81e-72 | 221 |
| MS.gene23776.t1 | MTR_8g074320 | 56.436 | 202 | 67 | 3 | 47 | 243 | 37 | 222 | 1.10e-69 | 218 |
| MS.gene23776.t1 | MTR_2g042370 | 32.676 | 355 | 224 | 10 | 24 | 369 | 10 | 358 | 4.41e-55 | 185 |
| MS.gene23776.t1 | MTR_2g042430 | 33.623 | 345 | 215 | 10 | 29 | 366 | 29 | 366 | 1.23e-54 | 184 |
| MS.gene23776.t1 | MTR_2g042420 | 32.394 | 355 | 221 | 12 | 24 | 369 | 6 | 350 | 4.13e-52 | 177 |
| MS.gene23776.t1 | MTR_4g050190 | 31.008 | 387 | 222 | 10 | 19 | 363 | 3 | 386 | 1.15e-43 | 156 |
| MS.gene23776.t1 | MTR_2g099030 | 32.381 | 315 | 168 | 7 | 62 | 331 | 62 | 376 | 1.18e-41 | 151 |
| MS.gene23776.t1 | MTR_2g087780 | 31.481 | 378 | 216 | 12 | 29 | 363 | 13 | 390 | 2.16e-41 | 150 |
| MS.gene23776.t1 | MTR_7g090300 | 32.915 | 319 | 172 | 10 | 80 | 363 | 53 | 364 | 2.24e-39 | 144 |
| MS.gene23776.t1 | MTR_7g090320 | 31.003 | 329 | 186 | 7 | 80 | 367 | 58 | 386 | 6.53e-39 | 143 |
| MS.gene23776.t1 | MTR_7g490350 | 30.239 | 377 | 201 | 12 | 25 | 363 | 12 | 364 | 2.45e-38 | 141 |
| MS.gene23776.t1 | MTR_7g490330 | 35.547 | 256 | 140 | 6 | 80 | 310 | 47 | 302 | 3.18e-38 | 140 |
| MS.gene23776.t1 | MTR_7g090310 | 30.631 | 333 | 191 | 7 | 75 | 367 | 53 | 385 | 4.45e-38 | 141 |
| MS.gene23776.t1 | MTR_5g091980 | 36.245 | 229 | 125 | 5 | 80 | 287 | 48 | 276 | 8.51e-34 | 128 |
| MS.gene23776.t1 | MTR_8g074290 | 53.211 | 109 | 47 | 3 | 245 | 351 | 46 | 152 | 3.75e-33 | 121 |
| MS.gene23776.t1 | MTR_4g112670 | 33.891 | 239 | 134 | 5 | 80 | 294 | 39 | 277 | 6.61e-31 | 120 |
| MS.gene23776.t1 | MTR_2g058450 | 32.068 | 237 | 136 | 4 | 78 | 289 | 38 | 274 | 2.89e-29 | 116 |
| MS.gene23776.t1 | MTR_4g112650 | 33.617 | 235 | 130 | 5 | 78 | 286 | 36 | 270 | 3.27e-29 | 115 |
| MS.gene23776.t1 | MTR_4g112630 | 33.475 | 236 | 130 | 7 | 78 | 286 | 36 | 271 | 1.67e-26 | 108 |
| MS.gene23776.t1 | MTR_0003s0530 | 39.535 | 129 | 77 | 1 | 167 | 294 | 4 | 132 | 2.77e-24 | 99.4 |
| MS.gene23776.t1 | MTR_2g058410 | 33.918 | 171 | 107 | 5 | 123 | 288 | 1 | 170 | 4.80e-22 | 94.0 |
| MS.gene23776.t1 | MTR_8g075500 | 78.431 | 51 | 11 | 0 | 94 | 144 | 170 | 220 | 1.10e-19 | 87.0 |
| MS.gene23776.t1 | MTR_4g112840 | 37.000 | 100 | 63 | 0 | 197 | 296 | 63 | 162 | 9.24e-16 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23776.t1 | AT3G51430 | 49.444 | 360 | 170 | 7 | 22 | 373 | 11 | 366 | 5.59e-119 | 350 |
| MS.gene23776.t1 | AT3G51430 | 49.444 | 360 | 168 | 8 | 22 | 373 | 11 | 364 | 3.57e-117 | 345 |
| MS.gene23776.t1 | AT3G51450 | 49.025 | 359 | 171 | 7 | 23 | 373 | 12 | 366 | 4.16e-117 | 345 |
| MS.gene23776.t1 | AT3G51420 | 48.611 | 360 | 173 | 7 | 22 | 373 | 11 | 366 | 2.98e-116 | 342 |
| MS.gene23776.t1 | AT3G51440 | 48.333 | 360 | 174 | 7 | 22 | 373 | 11 | 366 | 5.82e-115 | 339 |
| MS.gene23776.t1 | AT3G59530 | 32.602 | 319 | 174 | 7 | 26 | 304 | 19 | 336 | 1.04e-45 | 162 |
| MS.gene23776.t1 | AT3G59530 | 32.602 | 319 | 174 | 7 | 26 | 304 | 19 | 336 | 1.04e-45 | 162 |
| MS.gene23776.t1 | AT3G59530 | 32.602 | 319 | 174 | 7 | 26 | 304 | 19 | 336 | 1.04e-45 | 162 |
| MS.gene23776.t1 | AT1G08470 | 30.000 | 390 | 226 | 9 | 23 | 368 | 3 | 389 | 4.19e-45 | 160 |
| MS.gene23776.t1 | AT5G22020 | 32.099 | 324 | 188 | 7 | 77 | 368 | 72 | 395 | 1.67e-43 | 155 |
| MS.gene23776.t1 | AT5G22020 | 32.099 | 324 | 188 | 7 | 77 | 368 | 72 | 395 | 1.67e-43 | 155 |
| MS.gene23776.t1 | AT5G22020 | 32.099 | 324 | 188 | 7 | 77 | 368 | 72 | 395 | 1.67e-43 | 155 |
| MS.gene23776.t1 | AT3G57030 | 30.530 | 321 | 179 | 11 | 80 | 363 | 56 | 369 | 1.72e-35 | 134 |
| MS.gene23776.t1 | AT3G57020 | 28.803 | 309 | 192 | 9 | 80 | 367 | 53 | 354 | 5.94e-30 | 118 |
| MS.gene23776.t1 | AT3G57020 | 30.147 | 272 | 163 | 8 | 116 | 367 | 104 | 368 | 1.62e-29 | 117 |
| MS.gene23776.t1 | AT2G41290 | 29.878 | 328 | 181 | 10 | 79 | 363 | 50 | 371 | 2.80e-29 | 117 |
| MS.gene23776.t1 | AT3G57010 | 28.097 | 331 | 194 | 9 | 80 | 374 | 54 | 376 | 4.35e-28 | 113 |
| MS.gene23776.t1 | AT2G41300 | 30.739 | 257 | 160 | 8 | 89 | 331 | 97 | 349 | 2.18e-27 | 112 |
| MS.gene23776.t1 | AT1G74020 | 29.524 | 315 | 175 | 11 | 80 | 370 | 38 | 329 | 2.89e-27 | 110 |
| MS.gene23776.t1 | AT1G74010 | 32.743 | 226 | 128 | 7 | 80 | 282 | 37 | 261 | 8.20e-26 | 106 |
| MS.gene23776.t1 | AT1G74000 | 30.233 | 258 | 155 | 6 | 76 | 308 | 36 | 293 | 5.08e-23 | 99.0 |
Find 87 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAGTGGTCAATGAAAATT+TGG | 0.096368 | 8.4:-30441577 | None:intergenic |
| AGAATCCTTGATTGAGTATT+TGG | 0.126660 | 8.4:-30440162 | None:intergenic |
| TTTGTTGTTGTTTAAATTGT+AGG | 0.271192 | 8.4:-30441684 | None:intergenic |
| CCCTTTCATTAGGAAGGTTC+TGG | 0.311857 | 8.4:+30441455 | MS.gene23776:CDS |
| ACCGCTGAGGCTATAATAAC+TGG | 0.316840 | 8.4:-30436923 | None:intergenic |
| TATGACAAAAGGGTATAAAA+TGG | 0.328459 | 8.4:-30441631 | None:intergenic |
| TAGCTCAGAAATCTACCATT+AGG | 0.351349 | 8.4:-30440209 | None:intergenic |
| TTGACCACTGGGATTAAGAT+TGG | 0.354361 | 8.4:+30441588 | MS.gene23776:CDS |
| CCATCATAATGAATGTTATC+AGG | 0.354766 | 8.4:-30440853 | None:intergenic |
| CGTAACAACAACATGAGATT+AGG | 0.361874 | 8.4:+30437025 | MS.gene23776:CDS |
| TTGAGCATTATGTCCAGTTC+AGG | 0.364269 | 8.4:-30441429 | None:intergenic |
| GGATCATAGTAATGTGTTGT+AGG | 0.364483 | 8.4:-30441555 | None:intergenic |
| GTTTGCCTTCTAATATATCT+AGG | 0.365632 | 8.4:-30440187 | None:intergenic |
| GGTGAGACTGCAACTCCATT+AGG | 0.368711 | 8.4:-30440281 | None:intergenic |
| TGCTCAAATACCCTTTCATT+AGG | 0.379431 | 8.4:+30441445 | MS.gene23776:CDS |
| GCGTCGTATACCAAATCTTC+AGG | 0.409274 | 8.4:-30437082 | None:intergenic |
| CGGTGGAAGACCACTTGGTT+TGG | 0.418345 | 8.4:+30437195 | MS.gene23776:CDS |
| ATACGACGCTGATAAGGCTT+TGG | 0.425809 | 8.4:+30437096 | MS.gene23776:CDS |
| ATGAATCGGTGGTTGAAGAT+TGG | 0.435572 | 8.4:+30437164 | MS.gene23776:CDS |
| GTTTAAATTGTAGGTAGAGC+AGG | 0.438638 | 8.4:-30441675 | None:intergenic |
| AGTAGAGGTCACTCACTAGT+AGG | 0.439456 | 8.4:-30440256 | None:intergenic |
| ATGTCAAGACGTATGACAAA+AGG | 0.440499 | 8.4:-30441642 | None:intergenic |
| AGTGACCTCTACTTTCCTAA+TGG | 0.443237 | 8.4:+30440266 | MS.gene23776:CDS |
| ATGATGGACATGGGCAGTAC+TGG | 0.444773 | 8.4:+30440869 | MS.gene23776:CDS |
| TGAATGTTATCAGGCATGCC+AGG | 0.449090 | 8.4:-30440844 | None:intergenic |
| TGAATCGGTGGTTGAAGATT+GGG | 0.450708 | 8.4:+30437165 | MS.gene23776:CDS |
| TGACCACTGGGATTAAGATT+GGG | 0.462512 | 8.4:+30441589 | MS.gene23776:CDS |
| CCGGCTCGACCCTTTCGAAC+CGG | 0.467052 | 8.4:+30436952 | MS.gene23776:CDS |
| TTTGGTATACGACGCTGATA+AGG | 0.470598 | 8.4:+30437090 | MS.gene23776:CDS |
| AGGAGTTATCACTGTGGACT+TGG | 0.473224 | 8.4:+30441524 | MS.gene23776:CDS |
| CCTGATAACATTCATTATGA+TGG | 0.474172 | 8.4:+30440853 | MS.gene23776:CDS |
| CAAATACCCTTTCATTAGGA+AGG | 0.478049 | 8.4:+30441449 | MS.gene23776:CDS |
| CTCATGTTGTTGTTACGTAA+AGG | 0.483895 | 8.4:-30437019 | None:intergenic |
| GTTTATACTAGTTGTGAAGA+TGG | 0.487329 | 8.4:+30437118 | MS.gene23776:CDS |
| GCCAGAACCTTCCTAATGAA+AGG | 0.497938 | 8.4:-30441456 | None:intergenic |
| CCAGTGGTCAATGAAAATTT+GGG | 0.505659 | 8.4:-30441576 | None:intergenic |
| GGACATGGGCAGTACTGGAT+TGG | 0.509242 | 8.4:+30440874 | MS.gene23776:CDS |
| TATTGTTGCAGACGCAGATA+AGG | 0.512214 | 8.4:+30437240 | MS.gene23776:CDS |
| TCTGTCCTAGATATATTAGA+AGG | 0.514052 | 8.4:+30440182 | MS.gene23776:CDS |
| TGGACCGGGTTTGTTTGTCA+AGG | 0.516186 | 8.4:-30436985 | None:intergenic |
| ATATTAGAAGGCAAACCTAA+TGG | 0.516846 | 8.4:+30440194 | MS.gene23776:CDS |
| TTCATCCAAATACTCAATCA+AGG | 0.517336 | 8.4:+30440157 | MS.gene23776:CDS |
| GGGAAAACAACCGGTTCGAA+AGG | 0.518289 | 8.4:-30436962 | None:intergenic |
| AAGGAGCGGTTGTAGTGGAC+CGG | 0.518593 | 8.4:-30437000 | None:intergenic |
| TTTATACTAGTTGTGAAGAT+GGG | 0.522006 | 8.4:+30437119 | MS.gene23776:CDS |
| CCAGAACCTTCCTAATGAAA+GGG | 0.523065 | 8.4:-30441455 | None:intergenic |
| AACACCGGTGGAAGACCACT+TGG | 0.523954 | 8.4:+30437190 | MS.gene23776:CDS |
| CTAATATTCAAAATAACAGA+TGG | 0.527880 | 8.4:+30440092 | MS.gene23776:CDS |
| GGACCGGGTTTGTTTGTCAA+GGG | 0.528291 | 8.4:-30436984 | None:intergenic |
| TGTCAAGACGTATGACAAAA+GGG | 0.530568 | 8.4:-30441641 | None:intergenic |
| TAATATTCAAAATAACAGAT+GGG | 0.530673 | 8.4:+30440093 | MS.gene23776:CDS |
| GTACTTGTGACTGAGATTGA+TGG | 0.533589 | 8.4:+30440068 | MS.gene23776:CDS |
| GAGAATCACAGTGAATGAAT+CGG | 0.544128 | 8.4:+30437150 | MS.gene23776:CDS |
| GGAAAACAACCGGTTCGAAA+GGG | 0.552856 | 8.4:-30436961 | None:intergenic |
| AGTCTGAATTTGTCAAAGAA+CGG | 0.559155 | 8.4:+30441501 | MS.gene23776:CDS |
| ATACTAGTTGTGAAGATGGG+TGG | 0.563031 | 8.4:+30437122 | MS.gene23776:CDS |
| CCGGTTCGAAAGGGTCGAGC+CGG | 0.565326 | 8.4:-30436952 | None:intergenic |
| GTTATCACTGTGGACTTGGA+AGG | 0.570869 | 8.4:+30441528 | MS.gene23776:CDS |
| GTAGAGGTCACTCACTAGTA+GGG | 0.571038 | 8.4:-30440255 | None:intergenic |
| ATTGGGAATCACATGTATTG+TGG | 0.573834 | 8.4:+30441606 | MS.gene23776:CDS |
| TGCAAGAAATATTACATACA+TGG | 0.578745 | 8.4:+30440784 | MS.gene23776:CDS |
| AGGAGCGGTTGTAGTGGACC+GGG | 0.583921 | 8.4:-30436999 | None:intergenic |
| ACGTAAAGGAGCGGTTGTAG+TGG | 0.584948 | 8.4:-30437005 | None:intergenic |
| GAATGTTATCAGGCATGCCA+GGG | 0.588881 | 8.4:-30440843 | None:intergenic |
| CCCAGTTATTATAGCCTCAG+CGG | 0.590689 | 8.4:+30436922 | MS.gene23776:CDS |
| CAAACCAAGTGGTCTTCCAC+CGG | 0.592714 | 8.4:-30437194 | None:intergenic |
| CCGCTGAGGCTATAATAACT+GGG | 0.592910 | 8.4:-30436922 | None:intergenic |
| AACATTCATTATGATGGACA+TGG | 0.593918 | 8.4:+30440859 | MS.gene23776:CDS |
| ACCGGGTTTGTTTGTCAAGG+GGG | 0.602489 | 8.4:-30436982 | None:intergenic |
| GACCGGGTTTGTTTGTCAAG+GGG | 0.603502 | 8.4:-30436983 | None:intergenic |
| AATATTCAAAATAACAGATG+GGG | 0.627610 | 8.4:+30440094 | MS.gene23776:CDS |
| TGAGTATTTGGATGAAGCGT+CGG | 0.631980 | 8.4:-30440150 | None:intergenic |
| GTTGAAGATTGGGTTAACAC+CGG | 0.647511 | 8.4:+30437175 | MS.gene23776:CDS |
| GAAGATTGGGTTAACACCGG+TGG | 0.647988 | 8.4:+30437178 | MS.gene23776:CDS |
| ACATTCATTATGATGGACAT+GGG | 0.648960 | 8.4:+30440860 | MS.gene23776:CDS |
| CAACTCCATTAGGAAAGTAG+AGG | 0.650316 | 8.4:-30440271 | None:intergenic |
| GGGAGAATTATAGCTATGAA+CGG | 0.651872 | 8.4:-30436902 | None:intergenic |
| CTGAATTTGTCAAAGAACGG+AGG | 0.657045 | 8.4:+30441504 | MS.gene23776:CDS |
| GTTGTTGTTACGTAAAGGAG+CGG | 0.658381 | 8.4:-30437014 | None:intergenic |
| GGGGTTGATGTAGCACATGA+TGG | 0.659959 | 8.4:+30440113 | MS.gene23776:CDS |
| CCATCAAAAGCCAAACCAAG+TGG | 0.660290 | 8.4:-30437205 | None:intergenic |
| AATCACAGTGAATGAATCGG+TGG | 0.665793 | 8.4:+30437153 | MS.gene23776:CDS |
| GTACTGGATTGGAATAGCCA+CGG | 0.683691 | 8.4:+30440885 | MS.gene23776:CDS |
| TGTTATCAGGCATGCCAGGG+AGG | 0.693601 | 8.4:-30440840 | None:intergenic |
| ATTCCCAATCTTAATCCCAG+TGG | 0.699708 | 8.4:-30441592 | None:intergenic |
| GAGCCGGTAGAAAACCGCTG+AGG | 0.774766 | 8.4:-30436936 | None:intergenic |
| GAACGGAGGAGTTATCACTG+TGG | 0.783679 | 8.4:+30441518 | MS.gene23776:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACATTATTATTTATTTAG+TGG | + | chr8.4:30439941-30439960 | MS.gene23776:intron | 10.0% |
| !! | TACATTATTATTTATTTAGT+GGG | + | chr8.4:30439942-30439961 | MS.gene23776:intron | 10.0% |
| !!! | AAAATATTTGATGATTTTAA+GGG | - | chr8.4:30437650-30437669 | None:intergenic | 10.0% |
| !!! | CTAAATTTTTTCTTTTTTTA+AGG | + | chr8.4:30437320-30437339 | MS.gene23776:intron | 10.0% |
| !! | CATTTAATTAATTATGTATG+TGG | + | chr8.4:30438615-30438634 | MS.gene23776:intron | 15.0% |
| !! | TAATATTCAAAATAACAGAT+GGG | + | chr8.4:30440093-30440112 | MS.gene23776:CDS | 15.0% |
| !!! | AAATCAATGGTTTTTTTTTT+TGG | - | chr8.4:30437422-30437441 | None:intergenic | 15.0% |
| !!! | AATCTTTCATTTTTAACTTT+TGG | - | chr8.4:30439708-30439727 | None:intergenic | 15.0% |
| !!! | AGAGTTATATAATTTTTTTC+CGG | + | chr8.4:30437974-30437993 | MS.gene23776:intron | 15.0% |
| !!! | AGATTTTAAGAAAAAATCAA+TGG | - | chr8.4:30437435-30437454 | None:intergenic | 15.0% |
| !!! | ATATTTTTTTTTTGTACAAC+CGG | - | chr8.4:30437996-30438015 | None:intergenic | 15.0% |
| !!! | ATCTTTCATTTTTAACTTTT+GGG | - | chr8.4:30439707-30439726 | None:intergenic | 15.0% |
| !!! | CAAAATATTTGATGATTTTA+AGG | - | chr8.4:30437651-30437670 | None:intergenic | 15.0% |
| !!! | GTTACATTATCATTTTTTTT+TGG | + | chr8.4:30439891-30439910 | MS.gene23776:intron | 15.0% |
| !!! | TGGACTTATTTTTATTTTAT+GGG | + | chr8.4:30440742-30440761 | MS.gene23776:intron | 15.0% |
| !!! | TTGGACTTATTTTTATTTTA+TGG | + | chr8.4:30440741-30440760 | MS.gene23776:intron | 15.0% |
| !!! | TTTAAGGTAAAAAAAAGTTA+AGG | + | chr8.4:30437336-30437355 | MS.gene23776:intron | 15.0% |
| !!! | TTTTCTTAAAATCTAAGAAT+AGG | + | chr8.4:30437441-30437460 | MS.gene23776:intron | 15.0% |
| !! | AAAATATGTAGAATTGTTGT+AGG | - | chr8.4:30437583-30437602 | None:intergenic | 20.0% |
| !! | AAATATAAATTAGAGTGCAA+TGG | + | chr8.4:30438010-30438029 | MS.gene23776:intron | 20.0% |
| !! | AATAAATTTCCATCAAACTA+AGG | + | chr8.4:30440479-30440498 | MS.gene23776:intron | 20.0% |
| !! | AATATTCAAAATAACAGATG+GGG | + | chr8.4:30440094-30440113 | MS.gene23776:CDS | 20.0% |
| !! | ATAAATTTCCATCAAACTAA+GGG | + | chr8.4:30440480-30440499 | MS.gene23776:intron | 20.0% |
| !! | ATAATAAACATGTCATATGT+CGG | - | chr8.4:30438171-30438190 | None:intergenic | 20.0% |
| !! | ATATAATATGAGTTTGAAGA+TGG | + | chr8.4:30437532-30437551 | MS.gene23776:intron | 20.0% |
| !! | CATTTATTAAATGATGTATG+TGG | - | chr8.4:30438654-30438673 | None:intergenic | 20.0% |
| !! | CTAATATTCAAAATAACAGA+TGG | + | chr8.4:30440092-30440111 | MS.gene23776:CDS | 20.0% |
| !! | TATATAATCGAAACTACATA+GGG | - | chr8.4:30440594-30440613 | None:intergenic | 20.0% |
| !! | TTATATAATCGAAACTACAT+AGG | - | chr8.4:30440595-30440614 | None:intergenic | 20.0% |
| !!! | AAAAGTGCTAATTATATGTT+GGG | + | chr8.4:30441154-30441173 | MS.gene23776:intron | 20.0% |
| !!! | AACGTGTTTTTTAAGTTTTA+TGG | - | chr8.4:30440637-30440656 | None:intergenic | 20.0% |
| !!! | ACAATTCTACATATTTTGAT+TGG | + | chr8.4:30437586-30437605 | MS.gene23776:intron | 20.0% |
| !!! | ACGTGTTTTTTAAGTTTTAT+GGG | - | chr8.4:30440636-30440655 | None:intergenic | 20.0% |
| !!! | ATTTTAATATGTTCGTTTGA+GGG | - | chr8.4:30437483-30437502 | None:intergenic | 20.0% |
| !!! | CAAATACCTATATTTTTAGT+TGG | - | chr8.4:30437814-30437833 | None:intergenic | 20.0% |
| !!! | CATCTGTTATTTTGAATATT+AGG | - | chr8.4:30440094-30440113 | None:intergenic | 20.0% |
| !!! | TATTTTAATATGTTCGTTTG+AGG | - | chr8.4:30437484-30437503 | None:intergenic | 20.0% |
| !!! | TCTTTCATTTTTAACTTTTG+GGG | - | chr8.4:30439706-30439725 | None:intergenic | 20.0% |
| !!! | TGCAAAGTTAGTTTTTTTTT+TGG | - | chr8.4:30438474-30438493 | None:intergenic | 20.0% |
| !!! | TTTTGGTTACATAAAAGTTT+AGG | - | chr8.4:30438457-30438476 | None:intergenic | 20.0% |
| ! | AAAAATAATTTGGACTGTCA+CGG | - | chr8.4:30438820-30438839 | None:intergenic | 25.0% |
| ! | AAAAATGTGACATCCAATTT+AGG | + | chr8.4:30441100-30441119 | MS.gene23776:intron | 25.0% |
| ! | AATTAGATTAGTGAATGAGT+GGG | - | chr8.4:30439989-30440008 | None:intergenic | 25.0% |
| ! | ACACGATAACAAAATTTGAT+TGG | - | chr8.4:30438070-30438089 | None:intergenic | 25.0% |
| ! | AGAAAAACTAAAACAATCCT+GGG | - | chr8.4:30437379-30437398 | None:intergenic | 25.0% |
| ! | AGATTAATCTCTACAATTGT+GGG | + | chr8.4:30441010-30441029 | MS.gene23776:intron | 25.0% |
| ! | ATGAGTTACCAATACATATA+AGG | - | chr8.4:30441361-30441380 | None:intergenic | 25.0% |
| ! | ATGCATCCAACTAAAAATAT+AGG | + | chr8.4:30437805-30437824 | MS.gene23776:intron | 25.0% |
| ! | ATTAATCAATGATATGCTAC+AGG | + | chr8.4:30440010-30440029 | MS.gene23776:intron | 25.0% |
| ! | CACAATGTGTTTATAAATAG+GGG | + | chr8.4:30439282-30439301 | MS.gene23776:intron | 25.0% |
| ! | CTATAACATAAATTTCTGCA+TGG | - | chr8.4:30438781-30438800 | None:intergenic | 25.0% |
| ! | CTGACAATATGTTTATAAGT+GGG | + | chr8.4:30439049-30439068 | MS.gene23776:intron | 25.0% |
| ! | GCACAATGTGTTTATAAATA+GGG | + | chr8.4:30439281-30439300 | MS.gene23776:intron | 25.0% |
| ! | GGCTCTACATAAAAATAATT+TGG | - | chr8.4:30438830-30438849 | None:intergenic | 25.0% |
| ! | TAAAAAACGGAAAATTGAGA+CGG | + | chr8.4:30439464-30439483 | MS.gene23776:intron | 25.0% |
| ! | TAAATTTCCATCAAACTAAG+GGG | + | chr8.4:30440481-30440500 | MS.gene23776:intron | 25.0% |
| ! | TAATTAGATTAGTGAATGAG+TGG | - | chr8.4:30439990-30440009 | None:intergenic | 25.0% |
| ! | TAGAAAAACTAAAACAATCC+TGG | - | chr8.4:30437380-30437399 | None:intergenic | 25.0% |
| ! | TCTGACAATATGTTTATAAG+TGG | + | chr8.4:30439048-30439067 | MS.gene23776:intron | 25.0% |
| ! | TGACAATATGTTTATAAGTG+GGG | + | chr8.4:30439050-30439069 | MS.gene23776:intron | 25.0% |
| ! | TGAGTTACCAATACATATAA+GGG | - | chr8.4:30441360-30441379 | None:intergenic | 25.0% |
| ! | TGCAAGAAATATTACATACA+TGG | + | chr8.4:30440784-30440803 | MS.gene23776:CDS | 25.0% |
| ! | TGTAGTTTCGATTATATAAC+CGG | + | chr8.4:30440596-30440615 | MS.gene23776:intron | 25.0% |
| ! | TTAATCAATGATATGCTACA+GGG | + | chr8.4:30440011-30440030 | MS.gene23776:intron | 25.0% |
| ! | TTTATACTAGTTGTGAAGAT+GGG | + | chr8.4:30437119-30437138 | MS.gene23776:CDS | 25.0% |
| !! | AACAATCGACAATGATATTT+TGG | - | chr8.4:30439814-30439833 | None:intergenic | 25.0% |
| !! | AGAAAACAGTAGGATTTTAT+TGG | + | chr8.4:30438923-30438942 | MS.gene23776:intron | 25.0% |
| !! | ATACTTCCATGATATAGTTT+TGG | + | chr8.4:30439504-30439523 | MS.gene23776:intron | 25.0% |
| !! | CTTTTATACTTGTACTAACA+AGG | - | chr8.4:30440358-30440377 | None:intergenic | 25.0% |
| !! | GAAAACAGTAGGATTTTATT+GGG | + | chr8.4:30438924-30438943 | MS.gene23776:intron | 25.0% |
| !! | GGTATTTTGTAGTAACTATT+TGG | - | chr8.4:30439777-30439796 | None:intergenic | 25.0% |
| !! | TATGACAAAAGGGTATAAAA+TGG | - | chr8.4:30441634-30441653 | None:intergenic | 25.0% |
| !! | TTAGAAGTATGCAAGTAAAA+TGG | - | chr8.4:30440534-30440553 | None:intergenic | 25.0% |
| !! | TTTTAATATGTTCGTTTGAG+GGG | - | chr8.4:30437482-30437501 | None:intergenic | 25.0% |
| !! | TTTTCTGTTCATTGTACAAA+TGG | - | chr8.4:30441138-30441157 | None:intergenic | 25.0% |
| !!! | AATTGGATGTCACATTTTTT+TGG | - | chr8.4:30441099-30441118 | None:intergenic | 25.0% |
| !!! | CGTGTTTTTTAAGTTTTATG+GGG | - | chr8.4:30440635-30440654 | None:intergenic | 25.0% |
| !!! | GAAAAGTGCTAATTATATGT+TGG | + | chr8.4:30441153-30441172 | MS.gene23776:intron | 25.0% |
| !!! | TCCAATTTAGGTTTTTCTTA+AGG | + | chr8.4:30441112-30441131 | MS.gene23776:intron | 25.0% |
| !!! | TTGAATGTTTTTTCTGCAAA+TGG | + | chr8.4:30437290-30437309 | MS.gene23776:intron | 25.0% |
| !!! | TTTTTAATTCACGATGCATT+CGG | - | chr8.4:30438986-30439005 | None:intergenic | 25.0% |
| !!! | TTTTTGTTTATAACAGTGAC+CGG | - | chr8.4:30438584-30438603 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTGGTCAAGTCAA+TGG | - | chr8.4:30437410-30437429 | None:intergenic | 25.0% |
| AAAAAAACTAACTTTGCAGC+CGG | + | chr8.4:30438476-30438495 | MS.gene23776:intron | 30.0% | |
| AAAAAACGGAAAATTGAGAC+GGG | + | chr8.4:30439465-30439484 | MS.gene23776:intron | 30.0% | |
| AAAAACTAAAACAATCCTGG+GGG | - | chr8.4:30437377-30437396 | None:intergenic | 30.0% | |
| AAATGACTTGAGAAAACAGT+AGG | + | chr8.4:30438913-30438932 | MS.gene23776:intron | 30.0% | |
| AAGGTGATAAACAACTTACA+TGG | - | chr8.4:30440339-30440358 | None:intergenic | 30.0% | |
| AGAATCCTTGATTGAGTATT+TGG | - | chr8.4:30440165-30440184 | None:intergenic | 30.0% | |
| AGCATTTCCCTTATATGTAT+TGG | + | chr8.4:30441350-30441369 | MS.gene23776:intron | 30.0% | |
| AGTCTGAATTTGTCAAAGAA+CGG | + | chr8.4:30441501-30441520 | MS.gene23776:CDS | 30.0% | |
| ATATTAGAAGGCAAACCTAA+TGG | + | chr8.4:30440194-30440213 | MS.gene23776:CDS | 30.0% | |
| ATGCTAACATGTGTCTATAA+AGG | - | chr8.4:30441335-30441354 | None:intergenic | 30.0% | |
| CAATGTTAAGAGTTTCACAT+CGG | + | chr8.4:30439014-30439033 | MS.gene23776:intron | 30.0% | |
| CCATCATAATGAATGTTATC+AGG | - | chr8.4:30440856-30440875 | None:intergenic | 30.0% | |
| CCTGATAACATTCATTATGA+TGG | + | chr8.4:30440853-30440872 | MS.gene23776:CDS | 30.0% | |
| GAAAAACTAAAACAATCCTG+GGG | - | chr8.4:30437378-30437397 | None:intergenic | 30.0% | |
| GACCTACTTCTAAATGTTAT+TGG | + | chr8.4:30440722-30440741 | MS.gene23776:intron | 30.0% | |
| GAGATTAATCTCTACAATTG+TGG | + | chr8.4:30441009-30441028 | MS.gene23776:intron | 30.0% | |
| GCCTTAAGAAAAACCTAAAT+TGG | - | chr8.4:30441116-30441135 | None:intergenic | 30.0% | |
| GGCACAATGTGTTTATAAAT+AGG | + | chr8.4:30439280-30439299 | MS.gene23776:intron | 30.0% | |
| GGTTACATAAAAGTTTAGGT+TGG | - | chr8.4:30438453-30438472 | None:intergenic | 30.0% | |
| GTCCAATAACATTTAGAAGT+AGG | - | chr8.4:30440727-30440746 | None:intergenic | 30.0% | |
| GTTTATACTAGTTGTGAAGA+TGG | + | chr8.4:30437118-30437137 | MS.gene23776:CDS | 30.0% | |
| GTTTGCCTTCTAATATATCT+AGG | - | chr8.4:30440190-30440209 | None:intergenic | 30.0% | |
| TAATATGAGTTTGAAGATGG+TGG | + | chr8.4:30437535-30437554 | MS.gene23776:intron | 30.0% | |
| TCAAGTATTTCCCATATTCA+TGG | - | chr8.4:30438510-30438529 | None:intergenic | 30.0% | |
| TCTGTCCTAGATATATTAGA+AGG | + | chr8.4:30440182-30440201 | MS.gene23776:CDS | 30.0% | |
| TCTTTCTTGCGTTAAATCAT+TGG | + | chr8.4:30439853-30439872 | MS.gene23776:intron | 30.0% | |
| TTCATCCAAATACTCAATCA+AGG | + | chr8.4:30440157-30440176 | MS.gene23776:CDS | 30.0% | |
| ! | ATTTTATGGGATAATGTTGC+AGG | + | chr8.4:30440755-30440774 | MS.gene23776:intron | 30.0% |
| ! | GGTGTGCTTTATTGAAATTT+GGG | + | chr8.4:30440502-30440521 | MS.gene23776:intron | 30.0% |
| ! | TTTTCTGTGCTACCTTTTTT+TGG | - | chr8.4:30440811-30440830 | None:intergenic | 30.0% |
| !! | AACATTCATTATGATGGACA+TGG | + | chr8.4:30440859-30440878 | MS.gene23776:CDS | 30.0% |
| !! | AAGACGACAAAATTTTGATC+TGG | - | chr8.4:30440305-30440324 | None:intergenic | 30.0% |
| !! | ACATTCATTATGATGGACAT+GGG | + | chr8.4:30440860-30440879 | MS.gene23776:CDS | 30.0% |
| !! | CATAAAAGTTTAGGTTGGTT+CGG | - | chr8.4:30438448-30438467 | None:intergenic | 30.0% |
| !! | TTTTAATTCACGATGCATTC+GGG | - | chr8.4:30438985-30439004 | None:intergenic | 30.0% |
| !!! | ATTTTGGCTAATCATACATG+AGG | - | chr8.4:30439798-30439817 | None:intergenic | 30.0% |
| !!! | CAGATTTTAGAATCCGAATA+GGG | + | chr8.4:30440666-30440685 | MS.gene23776:intron | 30.0% |
| !!! | TCAGATTTTAGAATCCGAAT+AGG | + | chr8.4:30440665-30440684 | MS.gene23776:intron | 30.0% |
| !!! | TTCAAGACTTTGTTTTTCGA+AGG | - | chr8.4:30437740-30437759 | None:intergenic | 30.0% |
| !!! | TTTCTGTGCTACCTTTTTTT+GGG | - | chr8.4:30440810-30440829 | None:intergenic | 30.0% |
| ACATTTGAAGAATACACCTC+CGG | + | chr8.4:30438562-30438581 | MS.gene23776:intron | 35.0% | |
| ACCACTTAGAAATTGTGGTT+GGG | - | chr8.4:30439119-30439138 | None:intergenic | 35.0% | |
| ATCTCACATCGAATATGAGA+TGG | + | chr8.4:30439259-30439278 | MS.gene23776:intron | 35.0% | |
| ATGGCACCAAAACTATATCA+TGG | - | chr8.4:30439513-30439532 | None:intergenic | 35.0% | |
| ATGTCAAGACGTATGACAAA+AGG | - | chr8.4:30441645-30441664 | None:intergenic | 35.0% | |
| ATGTCATATGTCGGAAAATG+TGG | - | chr8.4:30438162-30438181 | None:intergenic | 35.0% | |
| ATTGGGAATCACATGTATTG+TGG | + | chr8.4:30441606-30441625 | MS.gene23776:CDS | 35.0% | |
| ATTTCCCATATTCATGGCAT+GGG | - | chr8.4:30438504-30438523 | None:intergenic | 35.0% | |
| CAAATACCCTTTCATTAGGA+AGG | + | chr8.4:30441449-30441468 | MS.gene23776:CDS | 35.0% | |
| CCAGTGGTCAATGAAAATTT+GGG | - | chr8.4:30441579-30441598 | None:intergenic | 35.0% | |
| CGTAACAACAACATGAGATT+AGG | + | chr8.4:30437025-30437044 | MS.gene23776:CDS | 35.0% | |
| CTGATACCACTTAGAAATTG+TGG | - | chr8.4:30439124-30439143 | None:intergenic | 35.0% | |
| GAGAATCACAGTGAATGAAT+CGG | + | chr8.4:30437150-30437169 | MS.gene23776:CDS | 35.0% | |
| GGATCATAGTAATGTGTTGT+AGG | - | chr8.4:30441558-30441577 | None:intergenic | 35.0% | |
| GGGAGAATTATAGCTATGAA+CGG | - | chr8.4:30436905-30436924 | None:intergenic | 35.0% | |
| GTGATAAACAACTTACATGG+AGG | - | chr8.4:30440336-30440355 | None:intergenic | 35.0% | |
| GTTTGTGTATTTCTTCTGTC+AGG | + | chr8.4:30441398-30441417 | MS.gene23776:intron | 35.0% | |
| TACATACATGGCCCAAAAAA+AGG | + | chr8.4:30440796-30440815 | MS.gene23776:CDS | 35.0% | |
| TACCACTTAGAAATTGTGGT+TGG | - | chr8.4:30439120-30439139 | None:intergenic | 35.0% | |
| TAGCTCAGAAATCTACCATT+AGG | - | chr8.4:30440212-30440231 | None:intergenic | 35.0% | |
| TATTTCCCATATTCATGGCA+TGG | - | chr8.4:30438505-30438524 | None:intergenic | 35.0% | |
| TGCTCAAATACCCTTTCATT+AGG | + | chr8.4:30441445-30441464 | MS.gene23776:CDS | 35.0% | |
| TGCTTATAATAGTGACCAGA+GGG | + | chr8.4:30438693-30438712 | MS.gene23776:intron | 35.0% | |
| TGTCAAGACGTATGACAAAA+GGG | - | chr8.4:30441644-30441663 | None:intergenic | 35.0% | |
| TGTCATATGTCGGAAAATGT+GGG | - | chr8.4:30438161-30438180 | None:intergenic | 35.0% | |
| TTCACTTAGAGCACATGTTA+AGG | + | chr8.4:30441190-30441209 | MS.gene23776:intron | 35.0% | |
| TTGAGATGAACTAGAACTCA+CGG | - | chr8.4:30438536-30438555 | None:intergenic | 35.0% | |
| TTGCTTATAATAGTGACCAG+AGG | + | chr8.4:30438692-30438711 | MS.gene23776:intron | 35.0% | |
| ! | ACTGAGATTTGAGATCCATA+TGG | - | chr8.4:30438225-30438244 | None:intergenic | 35.0% |
| ! | ACTTTTTGGACCTGAAGATT+TGG | + | chr8.4:30437072-30437091 | MS.gene23776:CDS | 35.0% |
| ! | CCAAATTTTCATTGACCACT+GGG | + | chr8.4:30441577-30441596 | MS.gene23776:CDS | 35.0% |
| ! | CTCATGTTGTTGTTACGTAA+AGG | - | chr8.4:30437022-30437041 | None:intergenic | 35.0% |
| ! | GGGTGTGCTTTATTGAAATT+TGG | + | chr8.4:30440501-30440520 | MS.gene23776:intron | 35.0% |
| !! | AAAGTGCTACTCCTCTTTTT+GGG | + | chr8.4:30439645-30439664 | MS.gene23776:intron | 35.0% |
| !! | TTAACTTTTGGGGACTTCTA+TGG | - | chr8.4:30439696-30439715 | None:intergenic | 35.0% |
| !!! | AGGGTTGTCTTTTTTGTTGA+TGG | - | chr8.4:30440239-30440258 | None:intergenic | 35.0% |
| !!! | ATATAGTTTTGGTGCCATTG+GGG | + | chr8.4:30439515-30439534 | MS.gene23776:intron | 35.0% |
| !!! | GATATAGTTTTGGTGCCATT+GGG | + | chr8.4:30439514-30439533 | MS.gene23776:intron | 35.0% |
| !!! | TGATATAGTTTTGGTGCCAT+TGG | + | chr8.4:30439513-30439532 | MS.gene23776:intron | 35.0% |
| AACTTTGCACCAACACACAT+TGG | + | chr8.4:30438268-30438287 | MS.gene23776:intron | 40.0% | |
| AATCACAGTGAATGAATCGG+TGG | + | chr8.4:30437153-30437172 | MS.gene23776:CDS | 40.0% | |
| AATGGTTAGGATTTCCCCAA+TGG | - | chr8.4:30439532-30439551 | None:intergenic | 40.0% | |
| ACACACACACACACACAAAA+GGG | + | chr8.4:30441053-30441072 | MS.gene23776:intron | 40.0% | |
| AGTGACATCAAATGATACCG+TGG | - | chr8.4:30440905-30440924 | None:intergenic | 40.0% | |
| AGTGACCTCTACTTTCCTAA+TGG | + | chr8.4:30440266-30440285 | MS.gene23776:CDS | 40.0% | |
| AGTTGTATCGCTACATGTGA+TGG | - | chr8.4:30439316-30439335 | None:intergenic | 40.0% | |
| ATAAAGAGTGATGCTACCGA+TGG | - | chr8.4:30439341-30439360 | None:intergenic | 40.0% | |
| ATACTAGTTGTGAAGATGGG+TGG | + | chr8.4:30437122-30437141 | MS.gene23776:CDS | 40.0% | |
| ATCCACACACATCAATGGTT+AGG | - | chr8.4:30439545-30439564 | None:intergenic | 40.0% | |
| ATCCTAACCATTGATGTGTG+TGG | + | chr8.4:30439540-30439559 | MS.gene23776:intron | 40.0% | |
| ATGAATCGGTGGTTGAAGAT+TGG | + | chr8.4:30437164-30437183 | MS.gene23776:CDS | 40.0% | |
| ATTCCCAATCTTAATCCCAG+TGG | - | chr8.4:30441595-30441614 | None:intergenic | 40.0% | |
| CAAAAAGAGGAGTAGCACTT+TGG | - | chr8.4:30439646-30439665 | None:intergenic | 40.0% | |
| CAACTCCATTAGGAAAGTAG+AGG | - | chr8.4:30440274-30440293 | None:intergenic | 40.0% | |
| CACCAATGACACCAAAGTTA+TGG | + | chr8.4:30439618-30439637 | MS.gene23776:intron | 40.0% | |
| CCAGAACCTTCCTAATGAAA+GGG | - | chr8.4:30441458-30441477 | None:intergenic | 40.0% | |
| CCCAGTGGTCAATGAAAATT+TGG | - | chr8.4:30441580-30441599 | None:intergenic | 40.0% | |
| CGGTAGCATCACTCTTTATA+GGG | + | chr8.4:30439342-30439361 | MS.gene23776:intron | 40.0% | |
| CTAACACAACTCCAGAAAAC+TGG | - | chr8.4:30439095-30439114 | None:intergenic | 40.0% | |
| CTCAAAAACAATACACCCTC+TGG | - | chr8.4:30438711-30438730 | None:intergenic | 40.0% | |
| CTGAATTTGTCAAAGAACGG+AGG | + | chr8.4:30441504-30441523 | MS.gene23776:CDS | 40.0% | |
| GCTATTAGGTTTCCGTTATC+AGG | + | chr8.4:30439173-30439192 | MS.gene23776:intron | 40.0% | |
| GGAGCATGGACATAAATGAT+GGG | - | chr8.4:30439202-30439221 | None:intergenic | 40.0% | |
| GGATCTGAAAAAGTTGCAGA+AGG | + | chr8.4:30437046-30437065 | MS.gene23776:CDS | 40.0% | |
| GTACTTGTGACTGAGATTGA+TGG | + | chr8.4:30440068-30440087 | MS.gene23776:CDS | 40.0% | |
| GTTGAAGATTGGGTTAACAC+CGG | + | chr8.4:30437175-30437194 | MS.gene23776:CDS | 40.0% | |
| GTTTCACATCGGATATGAGA+TGG | + | chr8.4:30439025-30439044 | MS.gene23776:intron | 40.0% | |
| TAAAGAGTGATGCTACCGAT+GGG | - | chr8.4:30439340-30439359 | None:intergenic | 40.0% | |
| TATTGTTGCAGACGCAGATA+AGG | + | chr8.4:30437240-30437259 | MS.gene23776:CDS | 40.0% | |
| TCGGTAGCATCACTCTTTAT+AGG | + | chr8.4:30439341-30439360 | MS.gene23776:intron | 40.0% | |
| TGAATCGGTGGTTGAAGATT+GGG | + | chr8.4:30437165-30437184 | MS.gene23776:CDS | 40.0% | |
| TGACCACTGGGATTAAGATT+GGG | + | chr8.4:30441589-30441608 | MS.gene23776:CDS | 40.0% | |
| TGAGTATTTGGATGAAGCGT+CGG | - | chr8.4:30440153-30440172 | None:intergenic | 40.0% | |
| TGGAGCATGGACATAAATGA+TGG | - | chr8.4:30439203-30439222 | None:intergenic | 40.0% | |
| TTATGTAGAGCCACCATTCA+CGG | + | chr8.4:30438838-30438857 | MS.gene23776:intron | 40.0% | |
| TTGACCACTGGGATTAAGAT+TGG | + | chr8.4:30441588-30441607 | MS.gene23776:CDS | 40.0% | |
| TTGAGCATTATGTCCAGTTC+AGG | - | chr8.4:30441432-30441451 | None:intergenic | 40.0% | |
| TTGTTTATAACAGTGACCGG+AGG | - | chr8.4:30438581-30438600 | None:intergenic | 40.0% | |
| TTTGGTATACGACGCTGATA+AGG | + | chr8.4:30437090-30437109 | MS.gene23776:CDS | 40.0% | |
| ! | CCCAAATTTTCATTGACCAC+TGG | + | chr8.4:30441576-30441595 | MS.gene23776:CDS | 40.0% |
| ! | GTTGCAGAAGGAGAACTTTT+TGG | + | chr8.4:30437058-30437077 | MS.gene23776:CDS | 40.0% |
| ! | GTTGTTGTTACGTAAAGGAG+CGG | - | chr8.4:30437017-30437036 | None:intergenic | 40.0% |
| !! | AAGTGCTACTCCTCTTTTTG+GGG | + | chr8.4:30439646-30439665 | MS.gene23776:intron | 40.0% |
| !! | AATGATGGGTGACCTGATAA+CGG | - | chr8.4:30439188-30439207 | None:intergenic | 40.0% |
| !! | CAAAGTGCTACTCCTCTTTT+TGG | + | chr8.4:30439644-30439663 | MS.gene23776:intron | 40.0% |
| !! | GATAACGGAAACCTAATAGC+AGG | - | chr8.4:30439173-30439192 | None:intergenic | 40.0% |
| !! | GGAAGTATTTCCCCAAAAAG+AGG | - | chr8.4:30439492-30439511 | None:intergenic | 40.0% |
| !! | TGCCATAACTTTGGTGTCAT+TGG | - | chr8.4:30439623-30439642 | None:intergenic | 40.0% |
| !!! | CAGTTTTCTGGAGTTGTGTT+AGG | + | chr8.4:30439093-30439112 | MS.gene23776:intron | 40.0% |
| !!! | GGTTTGGCTTTTGATGGAAA+TGG | + | chr8.4:30437211-30437230 | MS.gene23776:CDS | 40.0% |
| AACGGAAACCTAATAGCAGG+TGG | - | chr8.4:30439170-30439189 | None:intergenic | 45.0% | |
| ACCGCTGAGGCTATAATAAC+TGG | - | chr8.4:30436926-30436945 | None:intergenic | 45.0% | |
| AGGAGTTATCACTGTGGACT+TGG | + | chr8.4:30441524-30441543 | MS.gene23776:CDS | 45.0% | |
| AGTAGAGGTCACTCACTAGT+AGG | - | chr8.4:30440259-30440278 | None:intergenic | 45.0% | |
| ATACGACGCTGATAAGGCTT+TGG | + | chr8.4:30437096-30437115 | MS.gene23776:CDS | 45.0% | |
| ATATGGAGAACGTGGGAAGA+TGG | - | chr8.4:30438208-30438227 | None:intergenic | 45.0% | |
| ATCTTCCCACGTTCTCCATA+TGG | + | chr8.4:30438207-30438226 | MS.gene23776:intron | 45.0% | |
| CACACACACACACACACAAA+AGG | + | chr8.4:30441052-30441071 | MS.gene23776:intron | 45.0% | |
| CACACATCCACACACATCAA+TGG | - | chr8.4:30439550-30439569 | None:intergenic | 45.0% | |
| CCATCAAAAGCCAAACCAAG+TGG | - | chr8.4:30437208-30437227 | None:intergenic | 45.0% | |
| CCCAGTTATTATAGCCTCAG+CGG | + | chr8.4:30436922-30436941 | MS.gene23776:CDS | 45.0% | |
| CCCTTTCATTAGGAAGGTTC+TGG | + | chr8.4:30441455-30441474 | MS.gene23776:CDS | 45.0% | |
| CCGCTGAGGCTATAATAACT+GGG | - | chr8.4:30436925-30436944 | None:intergenic | 45.0% | |
| GAATGTTATCAGGCATGCCA+GGG | - | chr8.4:30440846-30440865 | None:intergenic | 45.0% | |
| GAGATCCATATGGAGAACGT+GGG | - | chr8.4:30438215-30438234 | None:intergenic | 45.0% | |
| GCCAGAACCTTCCTAATGAA+AGG | - | chr8.4:30441459-30441478 | None:intergenic | 45.0% | |
| GCCCAACCACAATTTCTAAG+TGG | + | chr8.4:30439115-30439134 | MS.gene23776:intron | 45.0% | |
| GCGTCGTATACCAAATCTTC+AGG | - | chr8.4:30437085-30437104 | None:intergenic | 45.0% | |
| GTACCTCTATAAGTGCCCTT+TGG | + | chr8.4:30438385-30438404 | MS.gene23776:intron | 45.0% | |
| GTAGAGGTCACTCACTAGTA+GGG | - | chr8.4:30440258-30440277 | None:intergenic | 45.0% | |
| GTAGCGATACAACTTCCCAT+CGG | + | chr8.4:30439322-30439341 | MS.gene23776:intron | 45.0% | |
| GTGTGTGATGTGTGTGTGTT+TGG | + | chr8.4:30439577-30439596 | MS.gene23776:intron | 45.0% | |
| GTGTGTGTGTGTGTGTGAAT+TGG | - | chr8.4:30441045-30441064 | None:intergenic | 45.0% | |
| GTTATCACTGTGGACTTGGA+AGG | + | chr8.4:30441528-30441547 | MS.gene23776:CDS | 45.0% | |
| TAGAGTGCAATGGACATGCA+CGG | + | chr8.4:30438020-30438039 | MS.gene23776:intron | 45.0% | |
| TATGGAGAACGTGGGAAGAT+GGG | - | chr8.4:30438207-30438226 | None:intergenic | 45.0% | |
| TATGTAGAGCCACCATTCAC+GGG | + | chr8.4:30438839-30438858 | MS.gene23776:intron | 45.0% | |
| TGAATGTTATCAGGCATGCC+AGG | - | chr8.4:30440847-30440866 | None:intergenic | 45.0% | |
| TGAGATCCATATGGAGAACG+TGG | - | chr8.4:30438216-30438235 | None:intergenic | 45.0% | |
| TGATGTGTGTGGATGTGTGT+GGG | + | chr8.4:30439551-30439570 | MS.gene23776:intron | 45.0% | |
| TGTGATGTGTGTGTGTTTGG+TGG | + | chr8.4:30439580-30439599 | MS.gene23776:intron | 45.0% | |
| TTGATGTGTGTGGATGTGTG+TGG | + | chr8.4:30439550-30439569 | MS.gene23776:intron | 45.0% | |
| TTGTCAAGGGGGAAAACAAC+CGG | - | chr8.4:30436974-30436993 | None:intergenic | 45.0% | |
| ! | AAGCACACCCCTTAGTTTGA+TGG | - | chr8.4:30440491-30440510 | None:intergenic | 45.0% |
| ! | ATGGGGTGTTCATACTGTTC+CGG | - | chr8.4:30440618-30440637 | None:intergenic | 45.0% |
| ! | ATTGAGACGGGACCTCTTTT+TGG | + | chr8.4:30439477-30439496 | MS.gene23776:intron | 45.0% |
| ! | CACAACCTTTTGCAAGGAAG+TGG | - | chr8.4:30438314-30438333 | None:intergenic | 45.0% |
| ! | CGAACACACAACCTTTTGCA+AGG | - | chr8.4:30438320-30438339 | None:intergenic | 45.0% |
| ! | GTACTGGATTGGAATAGCCA+CGG | + | chr8.4:30440885-30440904 | MS.gene23776:CDS | 45.0% |
| ! | GTATCGCTACATGTGATGGA+AGG | - | chr8.4:30439312-30439331 | None:intergenic | 45.0% |
| ! | TACCTCAGAAGCCAGTTTTC+TGG | + | chr8.4:30439081-30439100 | MS.gene23776:intron | 45.0% |
| ! | TCAGGCATTTTCTCCTGAAC+TGG | + | chr8.4:30441416-30441435 | MS.gene23776:intron | 45.0% |
| ! | TTGAGACGGGACCTCTTTTT+GGG | + | chr8.4:30439478-30439497 | MS.gene23776:intron | 45.0% |
| ! | TTTAGTGGGCACATCATGCA+TGG | + | chr8.4:30439956-30439975 | MS.gene23776:intron | 45.0% |
| !! | ACACATTGGCTCAGTTGGTA+AGG | + | chr8.4:30438282-30438301 | MS.gene23776:intron | 45.0% |
| !! | GCACTTTGGTGCCATAACTT+TGG | - | chr8.4:30439632-30439651 | None:intergenic | 45.0% |
| !! | GGAAAACAACCGGTTCGAAA+GGG | - | chr8.4:30436964-30436983 | None:intergenic | 45.0% |
| !! | TTGGCTCAGTTGGTAAGGAA+CGG | + | chr8.4:30438287-30438306 | MS.gene23776:intron | 45.0% |
| !!! | CCACTTGGTTTGGCTTTTGA+TGG | + | chr8.4:30437205-30437224 | MS.gene23776:CDS | 45.0% |
| !!! | CTCTTTTTGGGGTGAAACGA+GGG | + | chr8.4:30439657-30439676 | MS.gene23776:intron | 45.0% |
| !!! | TCTTTTTGGGGTGAAACGAG+GGG | + | chr8.4:30439658-30439677 | MS.gene23776:intron | 45.0% |
| !! | AAATAAAAAAATGTAAAAAA+CGG | + | chr8.4:30439451-30439470 | MS.gene23776:intron | 5.0% |
| !!! | TAAATATTTTTTTATTTAAG+TGG | - | chr8.4:30439408-30439427 | None:intergenic | 5.0% |
| !!! | TTTTTAAATACTTTTTTTTT+TGG | + | chr8.4:30437901-30437920 | MS.gene23776:intron | 5.0% |
| ACGGTCCACTTCCTTGCAAA+AGG | + | chr8.4:30438306-30438325 | MS.gene23776:intron | 50.0% | |
| ACGTAAAGGAGCGGTTGTAG+TGG | - | chr8.4:30437008-30437027 | None:intergenic | 50.0% | |
| ACTAAAACAATCCTGGGGGC+TGG | - | chr8.4:30437373-30437392 | None:intergenic | 50.0% | |
| ATGTAGAGCCACCATTCACG+GGG | + | chr8.4:30438840-30438859 | MS.gene23776:intron | 50.0% | |
| ATGTCCATGCTCCAGATGTC+CGG | + | chr8.4:30439209-30439228 | MS.gene23776:intron | 50.0% | |
| CAAACCAAGTGGTCTTCCAC+CGG | - | chr8.4:30437197-30437216 | None:intergenic | 50.0% | |
| CATATTCATGGCATGGGTGC+CGG | - | chr8.4:30438498-30438517 | None:intergenic | 50.0% | |
| CCAACTGAGCCAATGTGTGT+TGG | - | chr8.4:30438280-30438299 | None:intergenic | 50.0% | |
| CCTAATAGCAGGTGGTCCAA+CGG | - | chr8.4:30439162-30439181 | None:intergenic | 50.0% | |
| CCTCGTTTCACCCCAAAAAG+AGG | - | chr8.4:30439659-30439678 | None:intergenic | 50.0% | |
| CGGGGTGGGATACTGAAAAA+TGG | + | chr8.4:30438858-30438877 | MS.gene23776:intron | 50.0% | |
| GAACGGAGGAGTTATCACTG+TGG | + | chr8.4:30441518-30441537 | MS.gene23776:CDS | 50.0% | |
| GAAGATTGGGTTAACACCGG+TGG | + | chr8.4:30437178-30437197 | MS.gene23776:CDS | 50.0% | |
| GATGTGTGTGGATGTGTGTG+GGG | + | chr8.4:30439552-30439571 | MS.gene23776:intron | 50.0% | |
| GATTCTCTCTGCCGATGTGA+GGG | + | chr8.4:30438339-30438358 | MS.gene23776:intron | 50.0% | |
| GCAGACGCAGATAAGGTAAC+TGG | + | chr8.4:30437247-30437266 | MS.gene23776:intron | 50.0% | |
| GCGCGAGAAACTCATAGGAT+GGG | + | chr8.4:30440690-30440709 | MS.gene23776:intron | 50.0% | |
| GGCACCCATGCCATGAATAT+GGG | + | chr8.4:30438497-30438516 | MS.gene23776:intron | 50.0% | |
| GGTGAGACTGCAACTCCATT+AGG | - | chr8.4:30440284-30440303 | None:intergenic | 50.0% | |
| TCCCCCTTGACAAACAAACC+CGG | + | chr8.4:30436981-30437000 | MS.gene23776:CDS | 50.0% | |
| ! | ACCGGGTTTGTTTGTCAAGG+GGG | - | chr8.4:30436985-30437004 | None:intergenic | 50.0% |
| ! | CTCCAGAAAACTGGCTTCTG+AGG | - | chr8.4:30439086-30439105 | None:intergenic | 50.0% |
| ! | GACCGGGTTTGTTTGTCAAG+GGG | - | chr8.4:30436986-30437005 | None:intergenic | 50.0% |
| ! | GGACCGGGTTTGTTTGTCAA+GGG | - | chr8.4:30436987-30437006 | None:intergenic | 50.0% |
| ! | TAGCCTCAGCGGTTTTCTAC+CGG | + | chr8.4:30436933-30436952 | MS.gene23776:CDS | 50.0% |
| ! | TGAGACGGGACCTCTTTTTG+GGG | + | chr8.4:30439479-30439498 | MS.gene23776:intron | 50.0% |
| ! | TGGACCGGGTTTGTTTGTCA+AGG | - | chr8.4:30436988-30437007 | None:intergenic | 50.0% |
| !! | AGTTTAGGTTGGTTCGGCTC+CGG | - | chr8.4:30438442-30438461 | None:intergenic | 50.0% |
| !! | ATGATGGACATGGGCAGTAC+TGG | + | chr8.4:30440869-30440888 | MS.gene23776:CDS | 50.0% |
| !! | CCAACACACATTGGCTCAGT+TGG | + | chr8.4:30438277-30438296 | MS.gene23776:intron | 50.0% |
| !! | GGGAAAACAACCGGTTCGAA+AGG | - | chr8.4:30436965-30436984 | None:intergenic | 50.0% |
| !! | GGGGTTGATGTAGCACATGA+TGG | + | chr8.4:30440113-30440132 | MS.gene23776:CDS | 50.0% |
| !! | GGTCCAAAGGGCACTTATAG+AGG | - | chr8.4:30438391-30438410 | None:intergenic | 50.0% |
| !!! | CCTCTTTTTGGGGTGAAACG+AGG | + | chr8.4:30439656-30439675 | MS.gene23776:intron | 50.0% |
| AACACCGGTGGAAGACCACT+TGG | + | chr8.4:30437190-30437209 | MS.gene23776:CDS | 55.0% | |
| AGTTTCTCGCGCGCCCTATT+CGG | - | chr8.4:30440682-30440701 | None:intergenic | 55.0% | |
| ATGCTCCAGATGTCCGGTTC+TGG | + | chr8.4:30439215-30439234 | MS.gene23776:intron | 55.0% | |
| CAATTACTGTTCCAGCCCCC+AGG | + | chr8.4:30437359-30437378 | MS.gene23776:intron | 55.0% | |
| CACCAACACTGCCCTCACAT+CGG | - | chr8.4:30438353-30438372 | None:intergenic | 55.0% | |
| CCGTTGGACCACCTGCTATT+AGG | + | chr8.4:30439159-30439178 | MS.gene23776:intron | 55.0% | |
| CGATTCTCTCTGCCGATGTG+AGG | + | chr8.4:30438338-30438357 | MS.gene23776:intron | 55.0% | |
| CGCGCGAGAAACTCATAGGA+TGG | + | chr8.4:30440689-30440708 | MS.gene23776:intron | 55.0% | |
| CGGCACCCATGCCATGAATA+TGG | + | chr8.4:30438496-30438515 | MS.gene23776:intron | 55.0% | |
| CGGTGGAAGACCACTTGGTT+TGG | + | chr8.4:30437195-30437214 | MS.gene23776:CDS | 55.0% | |
| TCAGTATCCCACCCCGTGAA+TGG | - | chr8.4:30438854-30438873 | None:intergenic | 55.0% | |
| TCCGGTTATCACCAGGGTCA+GGG | - | chr8.4:30438424-30438443 | None:intergenic | 55.0% | |
| TGAAACGAGGGGCAGAAGAC+AGG | + | chr8.4:30439669-30439688 | MS.gene23776:intron | 55.0% | |
| TTCGGCTCCGGTTATCACCA+GGG | - | chr8.4:30438430-30438449 | None:intergenic | 55.0% | |
| ! | AGAACCGGACATCTGGAGCA+TGG | - | chr8.4:30439216-30439235 | None:intergenic | 55.0% |
| ! | GGACATGGGCAGTACTGGAT+TGG | + | chr8.4:30440874-30440893 | MS.gene23776:CDS | 55.0% |
| !! | AAGGAGCGGTTGTAGTGGAC+CGG | - | chr8.4:30437003-30437022 | None:intergenic | 55.0% |
| !! | ATGTCCGGTTCTGGACGTGA+GGG | + | chr8.4:30439224-30439243 | MS.gene23776:intron | 55.0% |
| !! | GATGTGAGGGCAGTGTTGGT+GGG | + | chr8.4:30438352-30438371 | MS.gene23776:intron | 55.0% |
| AGAGCCACCATTCACGGGGT+GGG | + | chr8.4:30438844-30438863 | MS.gene23776:intron | 60.0% | |
| AGGGCGCGCGAGAAACTCAT+AGG | + | chr8.4:30440685-30440704 | MS.gene23776:intron | 60.0% | |
| CACGTCCAGAACCGGACATC+TGG | - | chr8.4:30439223-30439242 | None:intergenic | 60.0% | |
| CTCCGGTTATCACCAGGGTC+AGG | - | chr8.4:30438425-30438444 | None:intergenic | 60.0% | |
| GAGCCGGTAGAAAACCGCTG+AGG | - | chr8.4:30436939-30436958 | None:intergenic | 60.0% | |
| GAGCCTCCTCCAAGATCCGT+TGG | + | chr8.4:30439143-30439162 | MS.gene23776:intron | 60.0% | |
| GCAGGTGGTCCAACGGATCT+TGG | - | chr8.4:30439155-30439174 | None:intergenic | 60.0% | |
| GCCCTGACCCTGGTGATAAC+CGG | + | chr8.4:30438420-30438439 | MS.gene23776:intron | 60.0% | |
| GGCACGTCTCTGGGTCCAAA+GGG | - | chr8.4:30438403-30438422 | None:intergenic | 60.0% | |
| GGTCCAACGGATCTTGGAGG+AGG | - | chr8.4:30439149-30439168 | None:intergenic | 60.0% | |
| GGTGGTCCAACGGATCTTGG+AGG | - | chr8.4:30439152-30439171 | None:intergenic | 60.0% | |
| GTATCCCACCCCGTGAATGG+TGG | - | chr8.4:30438851-30438870 | None:intergenic | 60.0% | |
| GTTCGGCTCCGGTTATCACC+AGG | - | chr8.4:30438431-30438450 | None:intergenic | 60.0% | |
| TAGAGCCACCATTCACGGGG+TGG | + | chr8.4:30438843-30438862 | MS.gene23776:intron | 60.0% | |
| TGCCGATGTGAGGGCAGTGT+TGG | + | chr8.4:30438348-30438367 | MS.gene23776:intron | 60.0% | |
| ! | CGATGTGAGGGCAGTGTTGG+TGG | + | chr8.4:30438351-30438370 | MS.gene23776:intron | 60.0% |
| !! | AGGAGCGGTTGTAGTGGACC+GGG | - | chr8.4:30437002-30437021 | None:intergenic | 60.0% |
| !! | GATGTCCGGTTCTGGACGTG+AGG | + | chr8.4:30439223-30439242 | MS.gene23776:intron | 60.0% |
| !! | TGTCCGGTTCTGGACGTGAG+GGG | + | chr8.4:30439225-30439244 | MS.gene23776:intron | 60.0% |
| CACCCCCTCACGTCCAGAAC+CGG | - | chr8.4:30439231-30439250 | None:intergenic | 65.0% | |
| CAGGGTCAGGGCACGTCTCT+GGG | - | chr8.4:30438412-30438431 | None:intergenic | 65.0% | |
| GGGCACGTCTCTGGGTCCAA+AGG | - | chr8.4:30438404-30438423 | None:intergenic | 65.0% | |
| ! | CCGGCTCGACCCTTTCGAAC+CGG | + | chr8.4:30436952-30436971 | MS.gene23776:CDS | 65.0% |
| ! | CCGGTTCGAAAGGGTCGAGC+CGG | - | chr8.4:30436955-30436974 | None:intergenic | 65.0% |
| !! | GTCCGGTTCTGGACGTGAGG+GGG | + | chr8.4:30439226-30439245 | MS.gene23776:intron | 65.0% |
| CCAGAGACGTGCCCTGACCC+TGG | + | chr8.4:30438410-30438429 | MS.gene23776:intron | 70.0% | |
| CCAGGGTCAGGGCACGTCTC+TGG | - | chr8.4:30438413-30438432 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 30436842 | 30441695 | 30436842 | ID=MS.gene23776 |
| chr8.4 | mRNA | 30436842 | 30441695 | 30436842 | ID=MS.gene23776.t1;Parent=MS.gene23776 |
| chr8.4 | exon | 30436842 | 30437261 | 30436842 | ID=MS.gene23776.t1.exon1;Parent=MS.gene23776.t1 |
| chr8.4 | CDS | 30436842 | 30437261 | 30436842 | ID=cds.MS.gene23776.t1;Parent=MS.gene23776.t1 |
| chr8.4 | exon | 30440032 | 30440339 | 30440032 | ID=MS.gene23776.t1.exon2;Parent=MS.gene23776.t1 |
| chr8.4 | CDS | 30440032 | 30440339 | 30440032 | ID=cds.MS.gene23776.t1;Parent=MS.gene23776.t1 |
| chr8.4 | exon | 30440777 | 30440906 | 30440777 | ID=MS.gene23776.t1.exon3;Parent=MS.gene23776.t1 |
| chr8.4 | CDS | 30440777 | 30440906 | 30440777 | ID=cds.MS.gene23776.t1;Parent=MS.gene23776.t1 |
| chr8.4 | exon | 30441420 | 30441695 | 30441420 | ID=MS.gene23776.t1.exon4;Parent=MS.gene23776.t1 |
| chr8.4 | CDS | 30441420 | 30441695 | 30441420 | ID=cds.MS.gene23776.t1;Parent=MS.gene23776.t1 |
| Gene Sequence |
| Protein sequence |
