Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022634.t1 | XP_013443879.1 | 97.3 | 220 | 6 | 0 | 1 | 220 | 1 | 220 | 6.80E-115 | 423.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022634.t1 | Q9FLT3 | 54.1 | 185 | 77 | 2 | 1 | 184 | 1 | 178 | 2.0e-51 | 203.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022634.t1 | A0A072TK56 | 97.3 | 220 | 6 | 0 | 1 | 220 | 1 | 220 | 4.9e-115 | 423.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene89773 | MS.gene022634 | PPI |
| MS.gene022634 | MS.gene70062 | PPI |
| MS.gene022634 | MS.gene96244 | PPI |
| MS.gene74887 | MS.gene022634 | PPI |
| MS.gene022634 | MS.gene50789 | PPI |
| MS.gene022634 | MS.gene037520 | PPI |
| MS.gene022634 | MS.gene70061 | PPI |
| MS.gene89775 | MS.gene022634 | PPI |
| MS.gene50786 | MS.gene022634 | PPI |
| MS.gene022634 | MS.gene037518 | PPI |
| MS.gene022634 | MS.gene50787 | PPI |
| MS.gene022634 | MS.gene037519 | PPI |
| MS.gene022634 | MS.gene047464 | PPI |
| MS.gene022634 | MS.gene89774 | PPI |
| MS.gene004411 | MS.gene022634 | PPI |
| MS.gene002728 | MS.gene022634 | PPI |
| MS.gene70064 | MS.gene022634 | PPI |
| MS.gene89772 | MS.gene022634 | PPI |
| MS.gene022634 | MS.gene005041 | PPI |
| MS.gene037516 | MS.gene022634 | PPI |
| MS.gene50790 | MS.gene022634 | PPI |
| MS.gene022634 | MS.gene07591 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022634.t1 | MTR_8g007300 | 97.273 | 220 | 6 | 0 | 1 | 220 | 1 | 220 | 5.84e-157 | 433 |
| MS.gene022634.t1 | MTR_3g096330 | 60.294 | 204 | 80 | 1 | 9 | 212 | 560 | 762 | 2.81e-79 | 252 |
| MS.gene022634.t1 | MTR_5g036570 | 45.856 | 181 | 93 | 4 | 24 | 201 | 25 | 203 | 8.33e-42 | 141 |
| MS.gene022634.t1 | MTR_1g085500 | 43.158 | 190 | 101 | 3 | 25 | 211 | 22 | 207 | 3.03e-38 | 132 |
| MS.gene022634.t1 | MTR_5g046410 | 38.991 | 218 | 117 | 5 | 11 | 214 | 4 | 219 | 1.46e-37 | 130 |
| MS.gene022634.t1 | MTR_5g046430 | 38.991 | 218 | 117 | 5 | 11 | 214 | 4 | 219 | 1.46e-37 | 130 |
| MS.gene022634.t1 | MTR_4g017030 | 38.991 | 218 | 117 | 5 | 11 | 214 | 4 | 219 | 1.46e-37 | 130 |
| MS.gene022634.t1 | MTR_2g019250 | 39.450 | 218 | 116 | 5 | 11 | 214 | 4 | 219 | 2.52e-37 | 130 |
| MS.gene022634.t1 | MTR_4g017040 | 40.500 | 200 | 106 | 4 | 26 | 214 | 22 | 219 | 4.13e-37 | 129 |
| MS.gene022634.t1 | MTR_4g017050 | 38.532 | 218 | 118 | 5 | 11 | 214 | 4 | 219 | 5.12e-37 | 129 |
| MS.gene022634.t1 | MTR_1g060120 | 36.946 | 203 | 121 | 2 | 14 | 211 | 14 | 214 | 2.00e-36 | 127 |
| MS.gene022634.t1 | MTR_7g111240 | 45.342 | 161 | 85 | 2 | 25 | 184 | 19 | 177 | 4.15e-36 | 126 |
| MS.gene022634.t1 | MTR_1g079490 | 43.210 | 162 | 89 | 1 | 26 | 184 | 22 | 183 | 2.23e-35 | 125 |
| MS.gene022634.t1 | MTR_6g005330 | 37.143 | 210 | 123 | 5 | 10 | 216 | 5 | 208 | 1.00e-34 | 123 |
| MS.gene022634.t1 | MTR_7g111240 | 44.720 | 161 | 83 | 2 | 25 | 184 | 19 | 174 | 1.06e-34 | 123 |
| MS.gene022634.t1 | MTR_6g005360 | 37.824 | 193 | 112 | 4 | 26 | 216 | 22 | 208 | 1.14e-33 | 120 |
| MS.gene022634.t1 | MTR_6g005310 | 37.824 | 193 | 112 | 4 | 26 | 216 | 22 | 208 | 1.56e-33 | 120 |
| MS.gene022634.t1 | MTR_6g005340 | 37.824 | 193 | 112 | 4 | 26 | 216 | 22 | 208 | 7.85e-33 | 118 |
| MS.gene022634.t1 | MTR_1g023770 | 39.216 | 204 | 106 | 4 | 17 | 210 | 13 | 208 | 2.21e-32 | 117 |
| MS.gene022634.t1 | MTR_1g085140 | 38.974 | 195 | 101 | 4 | 25 | 203 | 23 | 215 | 3.46e-32 | 116 |
| MS.gene022634.t1 | MTR_2g030855 | 44.785 | 163 | 82 | 4 | 25 | 184 | 21 | 178 | 9.29e-32 | 115 |
| MS.gene022634.t1 | MTR_1g112200 | 38.182 | 165 | 96 | 1 | 20 | 184 | 17 | 175 | 9.39e-31 | 112 |
| MS.gene022634.t1 | MTR_2g041570 | 36.158 | 177 | 102 | 3 | 4 | 179 | 3 | 169 | 2.05e-30 | 112 |
| MS.gene022634.t1 | MTR_2g041580 | 36.158 | 177 | 102 | 3 | 4 | 179 | 3 | 169 | 2.67e-30 | 111 |
| MS.gene022634.t1 | MTR_6g005380 | 37.313 | 201 | 121 | 3 | 10 | 206 | 5 | 204 | 4.61e-30 | 110 |
| MS.gene022634.t1 | MTR_8g020770 | 46.269 | 134 | 69 | 2 | 47 | 178 | 38 | 170 | 1.25e-29 | 110 |
| MS.gene022634.t1 | MTR_2g045100 | 33.143 | 175 | 108 | 2 | 5 | 179 | 3 | 168 | 2.51e-29 | 108 |
| MS.gene022634.t1 | MTR_2g036120 | 42.105 | 133 | 76 | 1 | 47 | 179 | 37 | 168 | 2.82e-29 | 108 |
| MS.gene022634.t1 | MTR_2g041550 | 35.882 | 170 | 100 | 2 | 12 | 180 | 9 | 170 | 3.46e-29 | 108 |
| MS.gene022634.t1 | MTR_2g031270 | 39.791 | 191 | 100 | 5 | 30 | 210 | 27 | 212 | 6.35e-29 | 108 |
| MS.gene022634.t1 | MTR_3g019650 | 33.491 | 212 | 116 | 5 | 5 | 202 | 3 | 203 | 7.01e-28 | 105 |
| MS.gene022634.t1 | MTR_8g020630 | 30.806 | 211 | 124 | 3 | 5 | 202 | 3 | 204 | 9.17e-28 | 105 |
| MS.gene022634.t1 | MTR_8g020590 | 37.037 | 135 | 84 | 1 | 47 | 180 | 34 | 168 | 1.71e-27 | 104 |
| MS.gene022634.t1 | MTR_3g019680 | 36.158 | 177 | 99 | 4 | 5 | 179 | 3 | 167 | 5.46e-27 | 102 |
| MS.gene022634.t1 | MTR_2g019780 | 31.481 | 216 | 116 | 5 | 7 | 202 | 4 | 207 | 1.12e-26 | 102 |
| MS.gene022634.t1 | MTR_6g005350 | 39.560 | 182 | 103 | 3 | 26 | 203 | 22 | 200 | 1.27e-26 | 102 |
| MS.gene022634.t1 | MTR_8g020650 | 33.136 | 169 | 99 | 2 | 47 | 202 | 37 | 204 | 1.27e-26 | 102 |
| MS.gene022634.t1 | MTR_3g019710 | 39.850 | 133 | 79 | 1 | 47 | 179 | 37 | 168 | 2.45e-26 | 101 |
| MS.gene022634.t1 | MTR_8g020763 | 38.060 | 134 | 81 | 2 | 47 | 179 | 17 | 149 | 2.72e-26 | 100 |
| MS.gene022634.t1 | MTR_3g073170 | 34.911 | 169 | 93 | 3 | 47 | 202 | 41 | 205 | 2.97e-26 | 101 |
| MS.gene022634.t1 | MTR_2g030895 | 43.478 | 138 | 74 | 3 | 51 | 184 | 7 | 144 | 3.26e-26 | 100 |
| MS.gene022634.t1 | MTR_0284s0010 | 36.723 | 177 | 99 | 4 | 5 | 179 | 3 | 168 | 4.43e-26 | 100 |
| MS.gene022634.t1 | MTR_2g030865 | 43.478 | 138 | 74 | 3 | 51 | 184 | 7 | 144 | 4.43e-26 | 99.8 |
| MS.gene022634.t1 | MTR_4g010340 | 36.842 | 171 | 94 | 6 | 11 | 179 | 6 | 164 | 8.04e-26 | 99.8 |
| MS.gene022634.t1 | MTR_5g031460 | 35.252 | 139 | 89 | 1 | 41 | 179 | 31 | 168 | 1.00e-25 | 99.8 |
| MS.gene022634.t1 | MTR_7g011340 | 36.970 | 165 | 93 | 2 | 47 | 201 | 37 | 200 | 1.60e-25 | 99.4 |
| MS.gene022634.t1 | MTR_8g020610 | 33.908 | 174 | 106 | 4 | 8 | 180 | 2 | 167 | 2.01e-25 | 99.0 |
| MS.gene022634.t1 | MTR_2g044040 | 34.483 | 174 | 103 | 3 | 8 | 179 | 4 | 168 | 2.99e-25 | 98.6 |
| MS.gene022634.t1 | MTR_8g020750 | 41.791 | 134 | 76 | 2 | 47 | 179 | 39 | 171 | 2.03e-24 | 96.3 |
| MS.gene022634.t1 | MTR_8g020670 | 31.548 | 168 | 101 | 2 | 48 | 202 | 38 | 204 | 2.58e-23 | 93.6 |
| MS.gene022634.t1 | MTR_8g020760 | 38.346 | 133 | 81 | 1 | 47 | 179 | 39 | 170 | 6.88e-23 | 92.4 |
| MS.gene022634.t1 | MTR_2g031300 | 40.876 | 137 | 58 | 3 | 51 | 184 | 7 | 123 | 3.58e-21 | 86.3 |
| MS.gene022634.t1 | MTR_2g086640 | 39.640 | 111 | 64 | 3 | 86 | 194 | 72 | 181 | 2.42e-19 | 82.8 |
| MS.gene022634.t1 | MTR_2g086620 | 37.615 | 109 | 67 | 1 | 87 | 194 | 74 | 182 | 1.37e-18 | 80.9 |
| MS.gene022634.t1 | MTR_2g086630 | 36.697 | 109 | 68 | 1 | 87 | 194 | 74 | 182 | 3.78e-18 | 79.7 |
| MS.gene022634.t1 | MTR_4g052770 | 37.273 | 110 | 68 | 1 | 86 | 194 | 74 | 183 | 9.21e-18 | 78.6 |
| MS.gene022634.t1 | MTR_4g052780 | 37.273 | 110 | 68 | 1 | 86 | 194 | 74 | 183 | 1.58e-17 | 78.2 |
| MS.gene022634.t1 | MTR_4g027415 | 40.566 | 106 | 62 | 1 | 48 | 153 | 38 | 142 | 1.83e-16 | 73.6 |
| MS.gene022634.t1 | MTR_3g019810 | 33.835 | 133 | 81 | 2 | 47 | 179 | 143 | 268 | 1.50e-14 | 71.6 |
| MS.gene022634.t1 | MTR_2g072560 | 33.058 | 121 | 73 | 1 | 5 | 125 | 3 | 115 | 4.64e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022634.t1 | AT5G61750 | 54.054 | 185 | 77 | 2 | 1 | 184 | 1 | 178 | 1.71e-66 | 204 |
| MS.gene022634.t1 | AT1G10460 | 44.375 | 160 | 85 | 3 | 25 | 180 | 18 | 177 | 1.77e-38 | 132 |
| MS.gene022634.t1 | AT3G04200 | 43.713 | 167 | 89 | 3 | 22 | 184 | 23 | 188 | 3.41e-37 | 130 |
| MS.gene022634.t1 | AT3G62020 | 45.161 | 186 | 87 | 5 | 10 | 187 | 6 | 184 | 8.21e-37 | 129 |
| MS.gene022634.t1 | AT1G09560 | 47.239 | 163 | 83 | 2 | 23 | 184 | 21 | 181 | 1.01e-36 | 128 |
| MS.gene022634.t1 | AT1G02335 | 42.262 | 168 | 84 | 3 | 26 | 187 | 24 | 184 | 2.63e-36 | 127 |
| MS.gene022634.t1 | AT5G38930 | 43.976 | 166 | 90 | 2 | 25 | 187 | 25 | 190 | 4.92e-35 | 124 |
| MS.gene022634.t1 | AT5G38960 | 41.463 | 164 | 92 | 2 | 25 | 184 | 25 | 188 | 2.38e-34 | 122 |
| MS.gene022634.t1 | AT5G38940 | 38.947 | 190 | 106 | 3 | 25 | 204 | 25 | 214 | 3.77e-34 | 122 |
| MS.gene022634.t1 | AT5G38940 | 38.947 | 190 | 106 | 3 | 25 | 204 | 49 | 238 | 4.42e-34 | 122 |
| MS.gene022634.t1 | AT3G05950 | 39.894 | 188 | 104 | 4 | 22 | 205 | 22 | 204 | 5.04e-34 | 122 |
| MS.gene022634.t1 | AT3G05930 | 35.616 | 219 | 124 | 4 | 1 | 212 | 1 | 209 | 3.95e-33 | 119 |
| MS.gene022634.t1 | AT3G04170 | 40.642 | 187 | 101 | 4 | 22 | 205 | 22 | 201 | 5.32e-33 | 119 |
| MS.gene022634.t1 | AT3G10080 | 37.368 | 190 | 114 | 2 | 25 | 211 | 25 | 212 | 1.25e-32 | 118 |
| MS.gene022634.t1 | AT5G38910 | 35.714 | 224 | 124 | 6 | 1 | 216 | 1 | 212 | 1.85e-32 | 117 |
| MS.gene022634.t1 | AT5G26700 | 38.947 | 190 | 104 | 4 | 1 | 187 | 1 | 181 | 1.94e-32 | 117 |
| MS.gene022634.t1 | AT4G14630 | 41.143 | 175 | 99 | 2 | 17 | 187 | 17 | 191 | 4.12e-32 | 116 |
| MS.gene022634.t1 | AT3G10080 | 37.368 | 190 | 114 | 2 | 25 | 211 | 96 | 283 | 4.32e-32 | 118 |
| MS.gene022634.t1 | AT5G39110 | 36.735 | 196 | 113 | 4 | 17 | 205 | 12 | 203 | 5.10e-32 | 116 |
| MS.gene022634.t1 | AT3G62020 | 46.358 | 151 | 69 | 3 | 44 | 187 | 10 | 155 | 6.35e-32 | 115 |
| MS.gene022634.t1 | AT5G39120 | 35.961 | 203 | 120 | 4 | 7 | 205 | 6 | 202 | 1.01e-31 | 115 |
| MS.gene022634.t1 | AT5G39150 | 38.043 | 184 | 106 | 3 | 26 | 205 | 23 | 202 | 1.85e-31 | 115 |
| MS.gene022634.t1 | AT1G72610 | 42.537 | 134 | 76 | 1 | 48 | 180 | 35 | 168 | 4.19e-31 | 113 |
| MS.gene022634.t1 | AT5G39180 | 40.491 | 163 | 93 | 2 | 26 | 184 | 23 | 185 | 7.99e-31 | 113 |
| MS.gene022634.t1 | AT3G04190 | 42.500 | 160 | 85 | 4 | 30 | 184 | 30 | 187 | 1.25e-30 | 112 |
| MS.gene022634.t1 | AT5G20630 | 34.783 | 184 | 109 | 5 | 4 | 186 | 3 | 176 | 3.83e-30 | 111 |
| MS.gene022634.t1 | AT3G04180 | 38.587 | 184 | 104 | 4 | 26 | 205 | 26 | 204 | 7.52e-30 | 110 |
| MS.gene022634.t1 | AT5G39160 | 36.082 | 194 | 119 | 3 | 22 | 211 | 20 | 212 | 1.27e-29 | 110 |
| MS.gene022634.t1 | AT5G39130 | 36.598 | 194 | 118 | 3 | 22 | 211 | 20 | 212 | 1.62e-29 | 110 |
| MS.gene022634.t1 | AT5G39190 | 36.082 | 194 | 119 | 3 | 22 | 211 | 20 | 212 | 1.98e-29 | 109 |
| MS.gene022634.t1 | AT3G04150 | 37.766 | 188 | 112 | 3 | 1 | 184 | 1 | 187 | 4.15e-29 | 108 |
| MS.gene022634.t1 | AT1G18970 | 37.778 | 180 | 105 | 5 | 10 | 188 | 14 | 187 | 1.08e-28 | 107 |
| MS.gene022634.t1 | AT1G18980 | 39.394 | 165 | 94 | 4 | 25 | 188 | 28 | 187 | 4.04e-28 | 106 |
| MS.gene022634.t1 | AT3G04150 | 41.781 | 146 | 81 | 2 | 43 | 184 | 55 | 200 | 1.02e-27 | 105 |
| MS.gene022634.t1 | AT5G39160 | 35.567 | 194 | 116 | 3 | 22 | 211 | 20 | 208 | 5.85e-27 | 103 |
| MS.gene022634.t1 | AT5G39160 | 33.544 | 158 | 102 | 1 | 57 | 211 | 33 | 190 | 5.81e-21 | 87.0 |
| MS.gene022634.t1 | AT5G39190 | 36.232 | 138 | 85 | 1 | 77 | 211 | 53 | 190 | 8.74e-21 | 86.7 |
| MS.gene022634.t1 | AT1G74820 | 30.516 | 213 | 134 | 5 | 8 | 210 | 16 | 224 | 8.01e-18 | 79.3 |
| MS.gene022634.t1 | AT5G38910 | 29.279 | 222 | 104 | 6 | 1 | 216 | 1 | 175 | 1.34e-15 | 72.4 |
Find 33 sgRNAs with CRISPR-Local
Find 39 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAATATGGTTTGTTTATT+TGG | 0.147969 | 8.4:-79359522 | None:intergenic |
| TGCTAATGAAACTTGGATTT+TGG | 0.152319 | 8.4:-79359460 | None:intergenic |
| CACCAACTTTGAGAACATTT+TGG | 0.167372 | 8.4:-79359827 | None:intergenic |
| CTTTCTGCTTCTCAAGTTCA+TGG | 0.253166 | 8.4:+79360023 | MS.gene022634:CDS |
| GTCACTGCTGCTGAATTTCC+AGG | 0.267510 | 8.4:+79359654 | MS.gene022634:CDS |
| ATGTAATGGAATAAACCTTT+AGG | 0.303470 | 8.4:-79359864 | None:intergenic |
| TCTTGAGCTGTTACATTAGC+TGG | 0.333856 | 8.4:-79359567 | None:intergenic |
| GGGTAGACCATTGATGAATA+TGG | 0.338217 | 8.4:-79359535 | None:intergenic |
| CAGTAGCTCTTGGATGATAA+TGG | 0.340284 | 8.4:-79359740 | None:intergenic |
| TGTTTATTTGGTGGAATTGA+TGG | 0.371662 | 8.4:-79359510 | None:intergenic |
| TTCCAAAATGTTCTCAAAGT+TGG | 0.374296 | 8.4:+79359825 | MS.gene022634:CDS |
| TGTAATGGAATAAACCTTTA+GGG | 0.377741 | 8.4:-79359863 | None:intergenic |
| CACAATCTGCTAATGAAACT+TGG | 0.384262 | 8.4:-79359467 | None:intergenic |
| TTCCATTACATTCTAAATCA+AGG | 0.393287 | 8.4:+79359876 | MS.gene022634:CDS |
| AACCTTGATTTAGAATGTAA+TGG | 0.410800 | 8.4:-79359878 | None:intergenic |
| AAGATCATTTCAGTAGCTCT+TGG | 0.441209 | 8.4:-79359750 | None:intergenic |
| TTTCCAGGGCTGAACACTCT+TGG | 0.460820 | 8.4:+79359669 | MS.gene022634:CDS |
| AATGTTGTGTCAGAAGTTGT+AGG | 0.463329 | 8.4:-79359963 | None:intergenic |
| AGCAGCAGTGACAAGTTTCA+CGG | 0.470392 | 8.4:-79359643 | None:intergenic |
| AACACTCTTGGTCTCTCGAT+TGG | 0.484763 | 8.4:+79359681 | MS.gene022634:CDS |
| AATATGGTTTGTTTATTTGG+TGG | 0.491327 | 8.4:-79359519 | None:intergenic |
| GGAATAATAGATACTTGTCC+AGG | 0.507182 | 8.4:-79359942 | None:intergenic |
| TACAACTTCTGACACAACAT+TGG | 0.513431 | 8.4:+79359965 | MS.gene022634:CDS |
| AAACAAACCATATTCATCAA+TGG | 0.515657 | 8.4:+79359528 | MS.gene022634:CDS |
| CAATAATATGAATGGCTAAG+AGG | 0.529024 | 8.4:-79360063 | None:intergenic |
| GTGTACAATAGTCAAAATCC+TGG | 0.531942 | 8.4:+79359924 | MS.gene022634:CDS |
| AGACCAAGAGTGTTCAGCCC+TGG | 0.540141 | 8.4:-79359672 | None:intergenic |
| TCACTGCTGCTGAATTTCCA+GGG | 0.546815 | 8.4:+79359655 | MS.gene022634:CDS |
| AGAATCGATATCGATAATGA+TGG | 0.562159 | 8.4:+79359705 | MS.gene022634:CDS |
| AAAGAAAATATTGTAAACAA+AGG | 0.628168 | 8.4:-79359415 | None:intergenic |
| ACTAGCGTTATTTAATTCCG+CGG | 0.642834 | 8.4:-79359598 | None:intergenic |
| AGCTCAAGATTTCAAGACCG+CGG | 0.654864 | 8.4:+79359581 | MS.gene022634:CDS |
| ATTGTACACTGAGTAGACAA+TGG | 0.673180 | 8.4:-79359910 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAAAATATTGTAAACAA+AGG | - | chr8.4:79359418-79359437 | None:intergenic | 15.0% |
| !! | GAAATGATCTTTGTTAAAAA+AGG | + | chr8.4:79359762-79359781 | MS.gene022634:CDS | 20.0% |
| !!! | ATGAATATGGTTTGTTTATT+TGG | - | chr8.4:79359525-79359544 | None:intergenic | 20.0% |
| ! | AAACAAACCATATTCATCAA+TGG | + | chr8.4:79359528-79359547 | MS.gene022634:CDS | 25.0% |
| ! | TTCCATTACATTCTAAATCA+AGG | + | chr8.4:79359876-79359895 | MS.gene022634:CDS | 25.0% |
| !! | AAAAAAGGTGTATTACTAGT+TGG | + | chr8.4:79359777-79359796 | MS.gene022634:CDS | 25.0% |
| !! | AACCTTGATTTAGAATGTAA+TGG | - | chr8.4:79359881-79359900 | None:intergenic | 25.0% |
| !! | ATGTAATGGAATAAACCTTT+AGG | - | chr8.4:79359867-79359886 | None:intergenic | 25.0% |
| !! | TGTAATGGAATAAACCTTTA+GGG | - | chr8.4:79359866-79359885 | None:intergenic | 25.0% |
| !!! | AATATGGTTTGTTTATTTGG+TGG | - | chr8.4:79359522-79359541 | None:intergenic | 25.0% |
| AGAATCGATATCGATAATGA+TGG | + | chr8.4:79359705-79359724 | MS.gene022634:CDS | 30.0% | |
| TTCCAAAATGTTCTCAAAGT+TGG | + | chr8.4:79359825-79359844 | MS.gene022634:CDS | 30.0% | |
| ! | TGCTAATGAAACTTGGATTT+TGG | - | chr8.4:79359463-79359482 | None:intergenic | 30.0% |
| ! | TGTTTATTTGGTGGAATTGA+TGG | - | chr8.4:79359513-79359532 | None:intergenic | 30.0% |
| AAGATCATTTCAGTAGCTCT+TGG | - | chr8.4:79359753-79359772 | None:intergenic | 35.0% | |
| AATGTTGTGTCAGAAGTTGT+AGG | - | chr8.4:79359966-79359985 | None:intergenic | 35.0% | |
| ACTAGCGTTATTTAATTCCG+CGG | - | chr8.4:79359601-79359620 | None:intergenic | 35.0% | |
| ATTGTACACTGAGTAGACAA+TGG | - | chr8.4:79359913-79359932 | None:intergenic | 35.0% | |
| CACAATCTGCTAATGAAACT+TGG | - | chr8.4:79359470-79359489 | None:intergenic | 35.0% | |
| GGAATAATAGATACTTGTCC+AGG | - | chr8.4:79359945-79359964 | None:intergenic | 35.0% | |
| GTGTACAATAGTCAAAATCC+TGG | + | chr8.4:79359924-79359943 | MS.gene022634:CDS | 35.0% | |
| TACAACTTCTGACACAACAT+TGG | + | chr8.4:79359965-79359984 | MS.gene022634:CDS | 35.0% | |
| ! | ACATTAGCTGGATTTTTGCA+GGG | - | chr8.4:79359558-79359577 | None:intergenic | 35.0% |
| ! | GATGTTTGTGTTTTCCCTAA+AGG | + | chr8.4:79359849-79359868 | MS.gene022634:CDS | 35.0% |
| ! | TACATTAGCTGGATTTTTGC+AGG | - | chr8.4:79359559-79359578 | None:intergenic | 35.0% |
| !! | CACCAACTTTGAGAACATTT+TGG | - | chr8.4:79359830-79359849 | None:intergenic | 35.0% |
| CAGTAGCTCTTGGATGATAA+TGG | - | chr8.4:79359743-79359762 | None:intergenic | 40.0% | |
| CTTTCTGCTTCTCAAGTTCA+TGG | + | chr8.4:79360023-79360042 | MS.gene022634:CDS | 40.0% | |
| GGGTAGACCATTGATGAATA+TGG | - | chr8.4:79359538-79359557 | None:intergenic | 40.0% | |
| TCTTGAGCTGTTACATTAGC+TGG | - | chr8.4:79359570-79359589 | None:intergenic | 40.0% | |
| !!! | GCTAGTTCTACCGACATTTT+TGG | + | chr8.4:79359615-79359634 | MS.gene022634:CDS | 40.0% |
| AACACTCTTGGTCTCTCGAT+TGG | + | chr8.4:79359681-79359700 | MS.gene022634:CDS | 45.0% | |
| AGCAGCAGTGACAAGTTTCA+CGG | - | chr8.4:79359646-79359665 | None:intergenic | 45.0% | |
| AGCTCAAGATTTCAAGACCG+CGG | + | chr8.4:79359581-79359600 | MS.gene022634:CDS | 45.0% | |
| TCACTGCTGCTGAATTTCCA+GGG | + | chr8.4:79359655-79359674 | MS.gene022634:CDS | 45.0% | |
| CACGGATGCGCCAAAAATGT+CGG | - | chr8.4:79359628-79359647 | None:intergenic | 50.0% | |
| GTCACTGCTGCTGAATTTCC+AGG | + | chr8.4:79359654-79359673 | MS.gene022634:CDS | 50.0% | |
| TTTCCAGGGCTGAACACTCT+TGG | + | chr8.4:79359669-79359688 | MS.gene022634:CDS | 50.0% | |
| !! | AGACCAAGAGTGTTCAGCCC+TGG | - | chr8.4:79359675-79359694 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 79359408 | 79360070 | 79359408 | ID=MS.gene022634 |
| chr8.4 | mRNA | 79359408 | 79360070 | 79359408 | ID=MS.gene022634.t1;Parent=MS.gene022634 |
| chr8.4 | exon | 79359408 | 79360070 | 79359408 | ID=MS.gene022634.t1.exon1;Parent=MS.gene022634.t1 |
| chr8.4 | CDS | 79359408 | 79360070 | 79359408 | ID=cds.MS.gene022634.t1;Parent=MS.gene022634.t1 |
| Gene Sequence |
| Protein sequence |
