AlfalfaGEDB | MS.gene74887

M. sativa cultivar XinJiangDaYe / MS.gene74887

KEGG: -
GO: GO:0003674 GO:0005488 GO:0030145 GO:0043167 GO:0043169 GO:0045735 GO:0046872 GO:0046914
PFAM: PF00190.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene74887.t1	XP_003590904.1	78.8	222	1	1	1	176	1	222	2.20E-87	331.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene74887.t1	Q2QXJ4	57.2	222	45	3	4	175	6	227	1.2e-59	230.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene74887.t1	G7I5N4	78.8	222	1	1	1	176	1	222	1.6e-87	331.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049611	MS.gene74887	0.817696	2.88E-52	-1.69E-46
MS.gene049634	MS.gene74887	0.819133	1.36E-52	-1.69E-46
MS.gene050444	MS.gene74887	-0.802895	4.51E-49	-1.69E-46
MS.gene05079	MS.gene74887	0.841433	4.77E-58	-1.69E-46
MS.gene050809	MS.gene74887	0.85302	3.15E-61	-1.69E-46
MS.gene05104	MS.gene74887	0.819407	1.18E-52	-1.69E-46
MS.gene051138	MS.gene74887	0.800315	1.53E-48	-1.69E-46
MS.gene051228	MS.gene74887	-0.80927	2.06E-50	-1.69E-46
MS.gene051632	MS.gene74887	0.823949	1.05E-53	-1.69E-46
MS.gene052805	MS.gene74887	0.821761	3.40E-53	-1.69E-46
MS.gene053420	MS.gene74887	0.829749	4.33E-55	-1.69E-46
MS.gene053488	MS.gene74887	0.810111	1.36E-50	-1.69E-46
MS.gene053916	MS.gene74887	-0.813574	2.39E-51	-1.69E-46
MS.gene054290	MS.gene74887	0.814485	1.50E-51	-1.69E-46
MS.gene055959	MS.gene74887	0.832924	7.16E-56	-1.69E-46
MS.gene056856	MS.gene74887	0.855384	6.54E-62	-1.69E-46
MS.gene057544	MS.gene74887	0.806274	8.91E-50	-1.69E-46
MS.gene057549	MS.gene74887	0.803829	2.89E-49	-1.69E-46
MS.gene058067	MS.gene74887	0.839197	1.83E-57	-1.69E-46
MS.gene058093	MS.gene74887	0.820444	6.84E-53	-1.69E-46
MS.gene058099	MS.gene74887	0.815674	8.19E-52	-1.69E-46
MS.gene058268	MS.gene74887	0.806247	9.02E-50	-1.69E-46
MS.gene058269	MS.gene74887	0.810067	1.39E-50	-1.69E-46
MS.gene058840	MS.gene74887	0.809394	1.93E-50	-1.69E-46
MS.gene059402	MS.gene74887	0.819096	1.39E-52	-1.69E-46
MS.gene059699	MS.gene74887	0.80379	2.95E-49	-1.69E-46
MS.gene060818	MS.gene74887	-0.813879	2.05E-51	-1.69E-46
MS.gene061041	MS.gene74887	-0.812519	4.07E-51	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene89773	MS.gene74887	PPI
MS.gene74887	MS.gene032601	PPI
MS.gene74887	MS.gene022634	PPI
MS.gene74887	MS.gene99166	PPI
MS.gene74887	MS.gene005041	PPI
MS.gene74887	MS.gene82859	PPI
MS.gene74887	MS.gene89772	PPI
MS.gene74887	MS.gene82858	PPI
MS.gene74887	MS.gene037517	PPI
MS.gene74887	MS.gene07591	PPI
MS.gene032598	MS.gene74887	PPI
MS.gene74887	MS.gene70062	PPI
MS.gene053033	MS.gene74887	PPI
MS.gene74887	MS.gene50790	PPI
MS.gene74887	MS.gene96244	PPI
MS.gene053027	MS.gene74887	PPI
MS.gene74887	MS.gene004411	PPI
MS.gene74887	MS.gene034877	PPI
MS.gene74887	MS.gene50786	PPI
MS.gene74887	MS.gene053031	PPI
MS.gene74887	MS.gene032599	PPI
MS.gene74887	MS.gene50789	PPI
MS.gene74887	MS.gene70063	PPI
MS.gene74887	MS.gene50788	PPI
MS.gene032601	MS.gene74887	PPI
MS.gene74887	MS.gene037520	PPI
MS.gene74887	MS.gene053030	PPI
MS.gene74887	MS.gene032598	PPI
MS.gene74887	MS.gene037851	PPI
MS.gene74887	MS.gene82855	PPI
MS.gene74887	MS.gene81739	PPI
MS.gene74887	MS.gene70061	PPI
MS.gene89775	MS.gene74887	PPI
MS.gene74887	MS.gene89775	PPI
MS.gene74887	MS.gene002728	PPI
MS.gene74887	MS.gene032596	PPI
MS.gene74887	MS.gene037518	PPI
MS.gene74887	MS.gene50787	PPI
MS.gene74887	MS.gene037519	PPI
MS.gene74887	MS.gene053029	PPI
MS.gene74887	MS.gene70064	PPI
MS.gene74887	MS.gene055423	PPI
MS.gene74887	MS.gene047464	PPI
MS.gene74887	MS.gene89774	PPI
MS.gene056870	MS.gene74887	PPI
MS.gene74887	MS.gene82860	PPI
MS.gene74887	MS.gene053026	PPI
MS.gene74887	MS.gene032597	PPI
MS.gene74887	MS.gene82857	PPI
MS.gene74887	MS.gene037516	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene74887.t1	MTR_1g079490	78.829	222	1	1	1	176	1	222	1.58e-117	332
MS.gene74887.t1	MTR_5g046410	67.873	221	26	1	1	176	1	221	6.89e-101	290
MS.gene74887.t1	MTR_5g046430	67.873	221	26	1	1	176	1	221	6.89e-101	290
MS.gene74887.t1	MTR_4g017030	67.873	221	26	1	1	176	1	221	6.89e-101	290
MS.gene74887.t1	MTR_4g017050	67.873	221	26	1	1	176	1	221	7.86e-101	290
MS.gene74887.t1	MTR_4g017040	67.421	221	27	1	1	176	1	221	1.52e-100	289
MS.gene74887.t1	MTR_2g019250	66.516	221	29	1	1	176	1	221	1.14e-99	286
MS.gene74887.t1	MTR_6g005330	65.297	219	29	3	3	176	4	220	9.54e-92	266
MS.gene74887.t1	MTR_6g005360	65.138	218	29	3	4	176	5	220	3.96e-91	265
MS.gene74887.t1	MTR_6g005340	65.741	216	27	3	6	176	7	220	7.07e-91	264
MS.gene74887.t1	MTR_6g005310	66.047	215	26	3	6	175	7	219	9.40e-91	264
MS.gene74887.t1	MTR_6g005350	53.182	220	55	4	2	176	3	219	2.73e-69	209
MS.gene74887.t1	MTR_1g023770	52.857	210	59	4	1	171	1	209	1.32e-63	195
MS.gene74887.t1	MTR_2g030855	71.212	132	37	1	40	171	82	212	4.78e-63	193
MS.gene74887.t1	MTR_6g005380	50.971	206	55	2	3	163	4	208	9.11e-62	190
MS.gene74887.t1	MTR_2g031270	70.455	132	38	1	40	171	83	213	1.27e-61	190
MS.gene74887.t1	MTR_2g030895	69.173	133	39	2	40	171	47	178	1.62e-60	186
MS.gene74887.t1	MTR_2g030865	69.173	133	39	2	40	171	47	178	2.54e-59	183
MS.gene74887.t1	MTR_1g085500	38.389	211	82	3	5	170	6	213	3.35e-45	148
MS.gene74887.t1	MTR_2g031300	57.576	132	34	3	40	171	47	156	1.16e-41	137
MS.gene74887.t1	MTR_7g111240	50.725	138	65	1	34	171	77	211	1.11e-40	137
MS.gene74887.t1	MTR_7g111240	50.725	138	65	1	34	171	74	208	1.17e-40	136
MS.gene74887.t1	MTR_1g085140	47.826	138	69	1	34	171	81	215	1.45e-39	134
MS.gene74887.t1	MTR_1g112200	38.860	193	73	3	19	171	20	207	9.87e-39	131
MS.gene74887.t1	MTR_5g036570	39.286	196	70	4	22	171	27	219	1.62e-36	126
MS.gene74887.t1	MTR_1g060120	45.652	138	70	2	34	171	89	221	3.48e-34	120
MS.gene74887.t1	MTR_2g041550	46.269	134	67	2	35	168	75	203	6.08e-31	111
MS.gene74887.t1	MTR_8g020750	44.444	126	66	1	24	149	67	188	6.18e-29	106
MS.gene74887.t1	MTR_2g086620	41.096	146	78	4	29	171	64	204	1.74e-27	102
MS.gene74887.t1	MTR_2g041570	42.963	135	72	2	35	169	75	204	2.04e-27	102
MS.gene74887.t1	MTR_2g041580	43.284	134	71	2	35	168	75	203	2.48e-27	102
MS.gene74887.t1	MTR_2g086630	40.411	146	79	4	29	171	64	204	5.13e-27	101
MS.gene74887.t1	MTR_4g052780	42.105	133	71	3	40	171	78	205	8.07e-27	100
MS.gene74887.t1	MTR_2g086640	41.353	133	72	3	40	171	76	203	1.08e-26	100
MS.gene74887.t1	MTR_4g052770	42.105	133	71	3	40	171	78	205	1.67e-26	100
MS.gene74887.t1	MTR_3g019710	40.458	131	72	2	41	171	81	205	4.20e-26	99.4
MS.gene74887.t1	MTR_3g019680	40.909	132	72	2	40	171	79	204	7.79e-26	98.6
MS.gene74887.t1	MTR_3g019650	40.152	132	73	2	40	171	79	204	4.07e-25	96.7
MS.gene74887.t1	MTR_2g036120	43.200	125	64	2	40	161	80	200	7.81e-25	95.9
MS.gene74887.t1	MTR_2g045100	40.152	132	73	2	40	171	80	205	1.21e-24	95.5
MS.gene74887.t1	MTR_2g019780	39.706	136	76	2	36	171	79	208	4.22e-24	94.0
MS.gene74887.t1	MTR_8g007300	45.690	116	59	2	40	155	90	201	5.81e-24	94.0
MS.gene74887.t1	MTR_8g020650	38.235	136	78	2	36	171	76	205	7.96e-24	93.2
MS.gene74887.t1	MTR_8g020630	42.609	115	62	1	40	154	80	190	1.33e-23	92.8
MS.gene74887.t1	MTR_8g020590	40.000	130	73	2	40	169	78	202	1.68e-23	92.4
MS.gene74887.t1	MTR_4g010340	38.971	136	76	3	36	171	73	201	2.45e-23	92.0
MS.gene74887.t1	MTR_0284s0010	39.695	131	73	2	41	171	81	205	9.28e-23	90.5
MS.gene74887.t1	MTR_2g044040	38.636	132	75	2	40	171	80	205	1.42e-22	90.1
MS.gene74887.t1	MTR_8g020670	37.879	132	76	2	40	171	80	205	1.65e-22	89.7
MS.gene74887.t1	MTR_8g020763	38.235	136	78	2	36	171	57	186	2.33e-22	89.0
MS.gene74887.t1	MTR_7g011340	39.695	131	73	2	41	171	81	205	3.24e-22	89.0
MS.gene74887.t1	MTR_8g020770	47.368	95	46	1	37	131	80	170	1.33e-21	87.4
MS.gene74887.t1	MTR_3g096330	41.667	132	66	3	27	155	625	748	7.72e-21	89.0
MS.gene74887.t1	MTR_5g031460	37.121	132	77	2	40	171	80	205	7.77e-21	85.5
MS.gene74887.t1	MTR_8g020610	35.606	132	80	2	40	171	77	203	4.89e-20	83.6
MS.gene74887.t1	MTR_3g073170	37.879	132	76	2	40	171	81	206	1.54e-19	82.0
MS.gene74887.t1	MTR_8g020760	38.235	136	78	2	36	171	78	207	2.27e-19	81.6
MS.gene74887.t1	MTR_2g030915	47.368	76	25	1	48	123	1	61	4.76e-18	75.5
MS.gene74887.t1	MTR_3g019810	33.333	123	70	4	40	161	186	297	1.39e-11	62.0
MS.gene74887.t1	MTR_4g027415	43.939	66	33	1	41	106	81	142	6.36e-11	57.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene74887.t1	AT5G39190	62.567	187	46	1	9	171	11	197	1.04e-76	228
MS.gene74887.t1	AT5G39160	62.567	187	46	1	9	171	11	197	1.08e-76	228
MS.gene74887.t1	AT3G05950	56.306	222	48	2	2	174	3	224	5.67e-76	227
MS.gene74887.t1	AT5G39160	57.073	205	46	1	9	171	11	215	1.42e-73	220
MS.gene74887.t1	AT5G39130	56.459	209	45	1	9	171	11	219	5.27e-73	219
MS.gene74887.t1	AT5G39150	53.521	213	52	1	6	171	7	219	2.51e-72	217
MS.gene74887.t1	AT5G39180	53.521	213	52	1	6	171	7	219	5.70e-72	216
MS.gene74887.t1	AT5G39160	55.502	209	47	1	9	171	11	219	7.83e-72	216
MS.gene74887.t1	AT5G39190	55.502	209	47	1	9	171	11	219	8.73e-72	216
MS.gene74887.t1	AT5G39120	55.172	203	44	1	16	171	17	219	9.64e-72	216
MS.gene74887.t1	AT5G39110	54.245	212	50	1	7	171	9	220	2.19e-71	215
MS.gene74887.t1	AT3G04200	52.381	210	54	1	8	171	13	222	9.12e-65	198
MS.gene74887.t1	AT4G14630	50.233	215	60	1	4	171	8	222	4.23e-64	196
MS.gene74887.t1	AT5G38940	64.189	148	52	1	24	171	75	221	4.23e-59	184
MS.gene74887.t1	AT5G38940	64.189	148	52	1	24	171	99	245	6.80e-59	184
MS.gene74887.t1	AT5G38930	65.541	148	50	1	24	171	75	221	1.14e-58	183
MS.gene74887.t1	AT5G38960	50.500	200	50	2	20	171	24	222	1.72e-57	180
MS.gene74887.t1	AT3G04170	45.894	207	69	1	8	171	12	218	9.41e-57	178
MS.gene74887.t1	AT5G38910	48.372	215	63	3	4	171	6	219	1.77e-56	177
MS.gene74887.t1	AT3G04180	46.798	203	62	1	15	171	19	221	3.99e-55	174
MS.gene74887.t1	AT3G04190	48.768	203	58	3	15	171	19	221	2.18e-54	172
MS.gene74887.t1	AT3G04150	42.922	219	76	2	2	171	3	221	3.05e-51	164
MS.gene74887.t1	AT3G04150	40.517	232	76	4	2	171	3	234	5.18e-46	151
MS.gene74887.t1	AT1G02335	40.000	210	78	3	7	171	9	215	1.98e-45	149
MS.gene74887.t1	AT1G09560	51.128	133	62	1	40	172	87	216	5.26e-43	143
MS.gene74887.t1	AT3G62020	40.465	215	78	5	3	171	5	215	2.55e-42	141
MS.gene74887.t1	AT1G18970	50.758	132	62	1	40	171	90	218	1.34e-41	139
MS.gene74887.t1	AT3G62020	51.079	139	64	2	34	171	51	186	3.61e-41	137
MS.gene74887.t1	AT1G18980	51.515	132	61	1	40	171	90	218	1.01e-40	137
MS.gene74887.t1	AT5G26700	47.826	138	66	2	34	171	78	209	2.42e-39	133
MS.gene74887.t1	AT3G05930	47.826	138	69	1	34	171	81	215	7.94e-39	132
MS.gene74887.t1	AT3G10080	38.119	202	71	4	19	171	23	219	5.39e-37	127
MS.gene74887.t1	AT3G10080	38.119	202	71	4	19	171	94	290	3.95e-36	127
MS.gene74887.t1	AT1G10460	45.113	133	69	2	40	171	86	215	2.14e-34	120
MS.gene74887.t1	AT5G38910	36.744	215	51	3	4	171	6	182	1.12e-32	115
MS.gene74887.t1	AT1G74820	42.424	132	73	1	40	171	97	225	7.53e-29	107
MS.gene74887.t1	AT5G20630	45.161	124	64	2	40	163	81	200	4.30e-28	104
MS.gene74887.t1	AT5G61750	50.962	104	47	2	40	143	84	183	9.79e-28	103
MS.gene74887.t1	AT1G72610	46.087	115	59	1	40	154	78	189	5.38e-26	99.0
MS.gene74887.t1	AT5G38950	61.972	71	27	0	100	170	2	72	3.25e-23	89.0

Find 46 sgRNAs with CRISPR-Local

Find 74 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTACTTCATCGTTGCCTTAT+TGG	0.169384	1.1:+59085149	MS.gene74887:CDS
GTGAGAACTTCCAAAGAAAT+TGG	0.253491	1.1:-59085977	None:intergenic
ATCTAAACCACCAATTTCTT+TGG	0.270284	1.1:+59085967	MS.gene74887:CDS
TACTGAGATTCTTGTAGTTT+TGG	0.280584	1.1:+59085739	MS.gene74887:CDS
CAAATATATACCACCAGTTT+TGG	0.298065	1.1:-59085244	None:intergenic
ACTATCTTCAAAAGCAATTC+TGG	0.307062	1.1:+59086032	MS.gene74887:CDS
CAACACACTTGGTATATCTT+TGG	0.313811	1.1:+59085661	MS.gene74887:CDS
TGAGGAGGATTTAGACCTTT+TGG	0.315163	1.1:-59085701	None:intergenic
GGGGAGGCTATTGCCATTGC+TGG	0.317939	1.1:+59085893	MS.gene74887:CDS
TTCCAATTGAACGTTGGTTA+TGG	0.322079	1.1:+59085872	MS.gene74887:CDS
TGGTAATCACTCCAGGGTTT+TGG	0.338241	1.1:-59085925	None:intergenic
ACCATAGCAAATGCTGTGTT+TGG	0.345841	1.1:+59085944	MS.gene74887:CDS
TCCAATTGAACGTTGGTTAT+GGG	0.359751	1.1:+59085873	MS.gene74887:CDS
TTTATCCACTTGAAAAGCTT+TGG	0.360291	1.1:-59085999	None:intergenic
AGATGATGCTAAAGCCAATA+AGG	0.364373	1.1:-59085163	None:intergenic
TTGCAATGGGCTGGGATCAT+AGG	0.370729	1.1:-59085196	None:intergenic
CCCCATAACCAACGTTCAAT+TGG	0.396722	1.1:-59085874	None:intergenic
ATCGCCTTTGTTCAATACTT+TGG	0.409827	1.1:-59085819	None:intergenic
TGGAAGTGAATGAGACCAAT+TGG	0.411740	1.1:-59085854	None:intergenic
GATGTATTTGTGTTTCCAAT+TGG	0.426726	1.1:+59085839	MS.gene74887:CDS
ACAAAAGTCTTGCAATGGGC+TGG	0.433311	1.1:-59085205	None:intergenic
TTGGCTTTAGCATCATCTGT+TGG	0.476411	1.1:+59085168	MS.gene74887:CDS
GCAATCAATGATACCAAAAC+TGG	0.479248	1.1:+59085231	MS.gene74887:CDS
CAAAAGTCTTGCAATGGGCT+GGG	0.501275	1.1:-59085204	None:intergenic
ACGGTTATTGTCTTGATTCG+AGG	0.502878	1.1:-59085789	None:intergenic
CCAATTGAACGTTGGTTATG+GGG	0.522282	1.1:+59085874	MS.gene74887:CDS
TTGGAAGGTACGCTTTATGT+TGG	0.530368	1.1:+59085758	MS.gene74887:CDS
CAACACAAAAGTCTTGCAAT+GGG	0.530539	1.1:-59085209	None:intergenic
TTTGCTATGGTAATCACTCC+AGG	0.534925	1.1:-59085932	None:intergenic
AGAACTTCCAAAGAAATTGG+TGG	0.547357	1.1:-59085974	None:intergenic
GCAACACAAAAGTCTTGCAA+TGG	0.550725	1.1:-59085210	None:intergenic
TTGGCTACTAAGACCAGCAA+TGG	0.575368	1.1:-59085906	None:intergenic
TCCAAACACAGCATTTGCTA+TGG	0.591300	1.1:-59085945	None:intergenic
TCAATACTTTGGTGAAGAGA+CGG	0.592996	1.1:-59085808	None:intergenic
ATTCACTTCCAATTGAACGT+TGG	0.603364	1.1:+59085866	MS.gene74887:CDS
ATATTAGGACTCAACACACT+TGG	0.605651	1.1:+59085650	MS.gene74887:intron
TTGCTATGGTAATCACTCCA+GGG	0.606541	1.1:-59085931	None:intergenic
ATCAATGATACCAAAACTGG+TGG	0.616290	1.1:+59085234	MS.gene74887:CDS
GTACCTCGAGGGTGAGTGTG+AGG	0.618466	1.1:-59085719	None:intergenic
ATTGAACGTTGGTTATGGGG+AGG	0.631460	1.1:+59085877	MS.gene74887:CDS
CCTCGAGGGTGAGTGTGAGG+AGG	0.646431	1.1:-59085716	None:intergenic
TTCACCAAAGTATTGAACAA+AGG	0.653228	1.1:+59085815	MS.gene74887:CDS
CAAGAATCTCAGTACCTCGA+GGG	0.659275	1.1:-59085730	None:intergenic
GGTCTTAGTAGCCAAAACCC+TGG	0.671124	1.1:+59085914	MS.gene74887:CDS
ACAAGAATCTCAGTACCTCG+AGG	0.695186	1.1:-59085731	None:intergenic
CCTCCTCACACTCACCCTCG+AGG	0.708362	1.1:+59085716	MS.gene74887:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTTTATTTATTTATTTTT+TGG	+	chr1.1:59085392-59085411	MS.gene74887:intron	0.0%
!!!	AAATCAATTACCATAATTTT+AGG	-	chr1.1:59085375-59085394	None:intergenic	15.0%
!!!	ATTTTATACACCTAAAATTA+TGG	+	chr1.1:59085362-59085381	MS.gene74887:intron	15.0%
!!	AAAAAACTATAATAACATGG+AGG	-	chr1.1:59085298-59085317	None:intergenic	20.0%
!!	CACAAAAAACTATAATAACA+TGG	-	chr1.1:59085301-59085320	None:intergenic	20.0%
!	GATTTCTTCTTTCAATGATT+GGG	+	chr1.1:59085569-59085588	MS.gene74887:intron	25.0%
!	TGATTTCTTCTTTCAATGAT+TGG	+	chr1.1:59085568-59085587	MS.gene74887:intron	25.0%
!!	AATCAAGTTTTCTTGTGATT+TGG	+	chr1.1:59085481-59085500	MS.gene74887:intron	25.0%
	ACTATCTTCAAAAGCAATTC+TGG	+	chr1.1:59086032-59086051	MS.gene74887:CDS	30.0%
	ATCTAAACCACCAATTTCTT+TGG	+	chr1.1:59085967-59085986	MS.gene74887:CDS	30.0%
	GATGTATTTGTGTTTCCAAT+TGG	+	chr1.1:59085839-59085858	MS.gene74887:CDS	30.0%
	TTTATCCACTTGAAAAGCTT+TGG	-	chr1.1:59086002-59086021	None:intergenic	30.0%
!	CAAATATATACCACCAGTTT+TGG	-	chr1.1:59085247-59085266	None:intergenic	30.0%
!	GATTGCATATCTAAAACATG+TGG	+	chr1.1:59085328-59085347	MS.gene74887:intron	30.0%
!	TACTGAGATTCTTGTAGTTT+TGG	+	chr1.1:59085739-59085758	MS.gene74887:CDS	30.0%
!!	TTCACCAAAGTATTGAACAA+AGG	+	chr1.1:59085815-59085834	MS.gene74887:CDS	30.0%
	AATATTTCATTAACCGCCAC+TGG	-	chr1.1:59085635-59085654	None:intergenic	35.0%
	AGAACTTCCAAAGAAATTGG+TGG	-	chr1.1:59085977-59085996	None:intergenic	35.0%
	AGATGATGCTAAAGCCAATA+AGG	-	chr1.1:59085166-59085185	None:intergenic	35.0%
	ATATTAGGACTCAACACACT+TGG	+	chr1.1:59085650-59085669	MS.gene74887:intron	35.0%
	ATCAATGATACCAAAACTGG+TGG	+	chr1.1:59085234-59085253	MS.gene74887:CDS	35.0%
	ATCGCCTTTGTTCAATACTT+TGG	-	chr1.1:59085822-59085841	None:intergenic	35.0%
	ATTCACTTCCAATTGAACGT+TGG	+	chr1.1:59085866-59085885	MS.gene74887:CDS	35.0%
	CAACACAAAAGTCTTGCAAT+GGG	-	chr1.1:59085212-59085231	None:intergenic	35.0%
	CAACACACTTGGTATATCTT+TGG	+	chr1.1:59085661-59085680	MS.gene74887:CDS	35.0%
	GCAATCAATGATACCAAAAC+TGG	+	chr1.1:59085231-59085250	MS.gene74887:CDS	35.0%
	GTGAGAACTTCCAAAGAAAT+TGG	-	chr1.1:59085980-59085999	None:intergenic	35.0%
	GTGGCGGTTAATGAAATATT+AGG	+	chr1.1:59085635-59085654	MS.gene74887:intron	35.0%
	TAATTTCCAGTGTTCGTGAA+TGG	+	chr1.1:59085509-59085528	MS.gene74887:intron	35.0%
	TCAATACTTTGGTGAAGAGA+CGG	-	chr1.1:59085811-59085830	None:intergenic	35.0%
	TTACTTCATCGTTGCCTTAT+TGG	+	chr1.1:59085149-59085168	MS.gene74887:CDS	35.0%
!	AATTTTCCATTCACGAACAC+TGG	-	chr1.1:59085518-59085537	None:intergenic	35.0%
!	TCCAATTGAACGTTGGTTAT+GGG	+	chr1.1:59085873-59085892	MS.gene74887:CDS	35.0%
!	TTCCAATTGAACGTTGGTTA+TGG	+	chr1.1:59085872-59085891	MS.gene74887:CDS	35.0%
!!!	GAGATTCTTGTAGTTTTGGA+AGG	+	chr1.1:59085743-59085762	MS.gene74887:CDS	35.0%
	ACCATAGCAAATGCTGTGTT+TGG	+	chr1.1:59085944-59085963	MS.gene74887:CDS	40.0%
	AGATCCTAAGCTTGCAAATG+CGG	+	chr1.1:59085544-59085563	MS.gene74887:intron	40.0%
	GCAACACAAAAGTCTTGCAA+TGG	-	chr1.1:59085213-59085232	None:intergenic	40.0%
	GGGAATACTTCAAATCCACT+CGG	+	chr1.1:59085596-59085615	MS.gene74887:intron	40.0%
	TGGAAGTGAATGAGACCAAT+TGG	-	chr1.1:59085857-59085876	None:intergenic	40.0%
	TTCTTTCAATGATTGGGACC+CGG	+	chr1.1:59085575-59085594	MS.gene74887:intron	40.0%
	TTGCTATGGTAATCACTCCA+GGG	-	chr1.1:59085934-59085953	None:intergenic	40.0%
!	ACGGTTATTGTCTTGATTCG+AGG	-	chr1.1:59085792-59085811	None:intergenic	40.0%
!	AGTGGATTTGAAGTATTCCC+GGG	-	chr1.1:59085596-59085615	None:intergenic	40.0%
!	CCAATTGAACGTTGGTTATG+GGG	+	chr1.1:59085874-59085893	MS.gene74887:CDS	40.0%
!	GAGTGGATTTGAAGTATTCC+CGG	-	chr1.1:59085597-59085616	None:intergenic	40.0%
!	TCCAAACACAGCATTTGCTA+TGG	-	chr1.1:59085948-59085967	None:intergenic	40.0%
!	TGAGGAGGATTTAGACCTTT+TGG	-	chr1.1:59085704-59085723	None:intergenic	40.0%
!	TTGGAAGGTACGCTTTATGT+TGG	+	chr1.1:59085758-59085777	MS.gene74887:CDS	40.0%
!	TTTGCTATGGTAATCACTCC+AGG	-	chr1.1:59085935-59085954	None:intergenic	40.0%
!!	TCTCACCAAAGCTTTTCAAG+TGG	+	chr1.1:59085994-59086013	MS.gene74887:CDS	40.0%
!!	TTGGCTTTAGCATCATCTGT+TGG	+	chr1.1:59085168-59085187	MS.gene74887:CDS	40.0%
	ACAAAAGTCTTGCAATGGGC+TGG	-	chr1.1:59085208-59085227	None:intergenic	45.0%
	ACAAGAATCTCAGTACCTCG+AGG	-	chr1.1:59085734-59085753	None:intergenic	45.0%
	CAAGAATCTCAGTACCTCGA+GGG	-	chr1.1:59085733-59085752	None:intergenic	45.0%
	CCCCATAACCAACGTTCAAT+TGG	-	chr1.1:59085877-59085896	None:intergenic	45.0%
	TCATCCGCATTTGCAAGCTT+AGG	-	chr1.1:59085551-59085570	None:intergenic	45.0%
	TCTTTCAATGATTGGGACCC+GGG	+	chr1.1:59085576-59085595	MS.gene74887:intron	45.0%
	TTGGCTACTAAGACCAGCAA+TGG	-	chr1.1:59085909-59085928	None:intergenic	45.0%
!	ATCTAAAGTGACTCCAGTGG+CGG	+	chr1.1:59085619-59085638	MS.gene74887:intron	45.0%
!	ATTGAACGTTGGTTATGGGG+AGG	+	chr1.1:59085877-59085896	MS.gene74887:CDS	45.0%
!	CAAAAGTCTTGCAATGGGCT+GGG	-	chr1.1:59085207-59085226	None:intergenic	45.0%
!	TGGTAATCACTCCAGGGTTT+TGG	-	chr1.1:59085928-59085947	None:intergenic	45.0%
!!	CTTTTGGTGCAAAATCGACG+CGG	-	chr1.1:59085688-59085707	None:intergenic	45.0%
!!	TTTTGGTGCAAAATCGACGC+GGG	-	chr1.1:59085687-59085706	None:intergenic	45.0%
	GGTCTTAGTAGCCAAAACCC+TGG	+	chr1.1:59085914-59085933	MS.gene74887:CDS	50.0%
!	CGGATCTAAAGTGACTCCAG+TGG	+	chr1.1:59085616-59085635	MS.gene74887:intron	50.0%
!	GGAGTCACTTTAGATCCGAG+TGG	-	chr1.1:59085614-59085633	None:intergenic	50.0%
!!	TTGCAATGGGCTGGGATCAT+AGG	-	chr1.1:59085199-59085218	None:intergenic	50.0%
!!!	CGCGTCGATTTTGCACCAAA+AGG	+	chr1.1:59085686-59085705	MS.gene74887:CDS	50.0%
	GGGGAGGCTATTGCCATTGC+TGG	+	chr1.1:59085893-59085912	MS.gene74887:CDS	60.0%
	GTACCTCGAGGGTGAGTGTG+AGG	-	chr1.1:59085722-59085741	None:intergenic	60.0%
	CCTCCTCACACTCACCCTCG+AGG	+	chr1.1:59085716-59085735	MS.gene74887:CDS	65.0%
	CCTCGAGGGTGAGTGTGAGG+AGG	-	chr1.1:59085719-59085738	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.1	gene	59085138	59086069	59085138	ID=MS.gene74887
chr1.1	mRNA	59085138	59086069	59085138	ID=MS.gene74887.t1;Parent=MS.gene74887
chr1.1	exon	59085138	59085255	59085138	ID=MS.gene74887.t1.exon1;Parent=MS.gene74887.t1
chr1.1	CDS	59085138	59085255	59085138	ID=cds.MS.gene74887.t1;Parent=MS.gene74887.t1
chr1.1	exon	59085657	59086069	59085657	ID=MS.gene74887.t1.exon2;Parent=MS.gene74887.t1
chr1.1	CDS	59085657	59086069	59085657	ID=cds.MS.gene74887.t1;Parent=MS.gene74887.t1

Gene Sequence

>MS.gene74887

ATGGGAGTTTTTTACTTCATCGTTGCCTTATTGGCTTTAGCATCATCTGTTGGTTTTGCCTATGATCCCAGCCCATTGCAAGACTTTTGTGTTGCAATCAATGATACCAAAACTGGTGGTATATATTTGTTGTTCAATTGTTCAAAATAAATGAATACCTCCATGTTATTATAGTTTTTTGTGTATAAATGATTGCATATCTAAAACATGTGGTAAACTTGAGTATTTTATACACCTAAAATTATGGTAATTGATTTTTTATTTATTTATTTTTTGGTTAAATGATGATGAATTTTATGCGTCTATATTAACTAATTAGAAAGTGTCAAGAGTTTATTATATTAATCAAGTTTTCTTGTGATTTGGTTTTCTAATTTCCAGTGTTCGTGAATGGAAAATTTTGCAAAGATCCTAAGCTTGCAAATGCGGATGATTTCTTCTTTCAATGATTGGGACCCGGGAATACTTCAAATCCACTCGGATCTAAAGTGACTCCAGTGGCGGTTAATGAAATATTAGGACTCAACACACTTGGTATATCTTTGGCCCGCGTCGATTTTGCACCAAAAGGTCTAAATCCTCCTCACACTCACCCTCGAGGTACTGAGATTCTTGTAGTTTTGGAAGGTACGCTTTATGTTGGATTCGTTACCTCGAATCAAGACAATAACCGTCTCTTCACCAAAGTATTGAACAAAGGCGATGTATTTGTGTTTCCAATTGGTCTCATTCACTTCCAATTGAACGTTGGTTATGGGGAGGCTATTGCCATTGCTGGTCTTAGTAGCCAAAACCCTGGAGTGATTACCATAGCAAATGCTGTGTTTGGATCTAAACCACCAATTTCTTTGGAAGTTCTCACCAAAGCTTTTCAAGTGGATAAAAATGTAATCGACTATCTTCAAAAGCAATTCTGGTACAACAATAGTTAA

Protein sequence

>MS.gene74887.t1

MGVFYFIVALLALASSVGFAYDPSPLQDFCVAINDTKTGGLNTLGISLARVDFAPKGLNPPHTHPRGTEILVVLEGTLYVGFVTSNQDNNRLFTKVLNKGDVFVFPIGLIHFQLNVGYGEAIAIAGLSSQNPGVITIANAVFGSKPPISLEVLTKAFQVDKNVIDYLQKQFWYNNS