Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043090.t1 | XP_003602607.1 | 93 | 214 | 15 | 0 | 72 | 285 | 68 | 281 | 8.80E-107 | 396.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043090.t1 | O35130 | 52.2 | 205 | 94 | 2 | 81 | 285 | 43 | 243 | 3.7e-53 | 209.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043090.t1 | G7JBJ8 | 93.0 | 214 | 15 | 0 | 72 | 285 | 68 | 281 | 6.4e-107 | 396.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene59369 | MS.gene043090 | PPI |
| MS.gene012655 | MS.gene043090 | PPI |
| MS.gene23314 | MS.gene043090 | PPI |
| MS.gene043090 | MS.gene50744 | PPI |
| MS.gene68942 | MS.gene043090 | PPI |
| MS.gene053381 | MS.gene043090 | PPI |
| MS.gene028153 | MS.gene043090 | PPI |
| MS.gene043090 | MS.gene29448 | PPI |
| MS.gene019309 | MS.gene043090 | PPI |
| MS.gene042172 | MS.gene043090 | PPI |
| MS.gene063568 | MS.gene043090 | PPI |
| MS.gene26077 | MS.gene043090 | PPI |
| MS.gene72768 | MS.gene043090 | PPI |
| MS.gene82426 | MS.gene043090 | PPI |
| MS.gene83444 | MS.gene043090 | PPI |
| MS.gene063209 | MS.gene043090 | PPI |
| MS.gene52173 | MS.gene043090 | PPI |
| MS.gene023799 | MS.gene043090 | PPI |
| MS.gene42236 | MS.gene043090 | PPI |
| MS.gene27648 | MS.gene043090 | PPI |
| MS.gene65479 | MS.gene043090 | PPI |
| MS.gene043090 | MS.gene015586 | PPI |
| MS.gene89206 | MS.gene043090 | PPI |
| MS.gene003693 | MS.gene043090 | PPI |
| MS.gene017434 | MS.gene043090 | PPI |
| MS.gene029825 | MS.gene043090 | PPI |
| MS.gene072782 | MS.gene043090 | PPI |
| MS.gene75013 | MS.gene043090 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043090.t1 | MTR_3g096190 | 88.889 | 288 | 22 | 3 | 1 | 285 | 1 | 281 | 0.0 | 501 |
| MS.gene043090.t1 | MTR_4g032390 | 87.719 | 285 | 33 | 2 | 1 | 285 | 1 | 283 | 1.30e-180 | 498 |
| MS.gene043090.t1 | MTR_3g096190 | 87.907 | 215 | 16 | 3 | 1 | 212 | 1 | 208 | 4.57e-127 | 360 |
| MS.gene043090.t1 | MTR_5g464770 | 50.000 | 220 | 100 | 3 | 76 | 285 | 19 | 238 | 2.76e-68 | 212 |
| MS.gene043090.t1 | MTR_1g112880 | 52.071 | 169 | 80 | 1 | 117 | 285 | 2 | 169 | 1.66e-57 | 182 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043090.t1 | AT3G57000 | 55.375 | 307 | 105 | 6 | 1 | 285 | 1 | 297 | 3.04e-114 | 331 |
Find 59 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTTCATCTTGTTGTTCA+TGG | 0.183897 | 4.2:+72858264 | None:intergenic |
| TCATTCAAAGGAGGAGTAAT+TGG | 0.256077 | 4.2:+72858134 | None:intergenic |
| TGTTCTTGGTATACGAATAT+AGG | 0.277413 | 4.2:+72853948 | None:intergenic |
| GCGAACCGTTTGAATGTTCT+TGG | 0.280296 | 4.2:+72853934 | None:intergenic |
| GAGAGTTGACGGGCAAATAC+TGG | 0.282558 | 4.2:+72853687 | None:intergenic |
| TACAGTAAGCAGCACTTAAT+TGG | 0.314750 | 4.2:+72852755 | None:intergenic |
| TGAAGCTGGGAGGTTGAAAA+TGG | 0.328722 | 4.2:-72854013 | MS.gene043090:CDS |
| GCAAGGATCCTGGTCATTAC+AGG | 0.339703 | 4.2:-72856197 | MS.gene043090:CDS |
| GTTCTTGGTATACGAATATA+GGG | 0.345230 | 4.2:+72853949 | None:intergenic |
| GGTTCATCGTTCTGAAGATT+TGG | 0.346875 | 4.2:+72858212 | None:intergenic |
| ACGGGCAAATACTGGGTTAC+GGG | 0.353988 | 4.2:+72853695 | None:intergenic |
| TTCTGAAGATTTGGTTTCTT+CGG | 0.363113 | 4.2:+72858221 | None:intergenic |
| CAATCAGGACCTTGTCTTTG+TGG | 0.379821 | 4.2:-72853308 | MS.gene043090:intron |
| GTAGTTTCTGTTGGCGCACT+TGG | 0.393876 | 4.2:+72858191 | None:intergenic |
| AACCTCCCAGCTTCATTTAG+TGG | 0.408647 | 4.2:+72854021 | None:intergenic |
| CAGGCCTGACATTTGTCATC+AGG | 0.410963 | 4.2:-72856178 | MS.gene043090:intron |
| GTCGACAATTCCAAGCAATC+AGG | 0.414223 | 4.2:-72853323 | MS.gene043090:CDS |
| GTATACATAAGGACTGAAAA+AGG | 0.415050 | 4.2:-72853991 | MS.gene043090:CDS |
| ACCTCCCAGCTTCATTTAGT+GGG | 0.415325 | 4.2:+72854022 | None:intergenic |
| TTGTTCATGGTCGTGCTTTG+TGG | 0.426208 | 4.2:+72858277 | None:intergenic |
| AAGGATTACTAATGCTATTG+AGG | 0.435293 | 4.2:-72852728 | MS.gene043090:CDS |
| TCTTTAGAAGTCGCTAAAGT+TGG | 0.449255 | 4.2:-72858065 | MS.gene043090:CDS |
| ACCGATGTAACTGAACTTCC+TGG | 0.451025 | 4.2:-72858161 | MS.gene043090:CDS |
| TGGAATTGTCGACAAATACT+TGG | 0.452521 | 4.2:+72853333 | None:intergenic |
| TACATAGATGATTATATAGC+TGG | 0.453978 | 4.2:-72853171 | MS.gene043090:intron |
| ATCTTATAGTTCAGAGAAGC+TGG | 0.455879 | 4.2:-72853365 | MS.gene043090:CDS |
| CAGGATCCTTGCTATGTTTG+CGG | 0.457691 | 4.2:+72856208 | None:intergenic |
| AGATTTGGTTTCTTCGGTGT+TGG | 0.457851 | 4.2:+72858227 | None:intergenic |
| AGGATTACTAATGCTATTGA+GGG | 0.461127 | 4.2:-72852727 | MS.gene043090:CDS |
| CCCGTCAACTCTCGAAAAGC+AGG | 0.471030 | 4.2:-72853677 | MS.gene043090:intron |
| GACAGCCCACTAAATGAAGC+TGG | 0.478319 | 4.2:-72854027 | MS.gene043090:CDS |
| AAGACAAGGTCCTGATTGCT+TGG | 0.489499 | 4.2:+72853313 | None:intergenic |
| AAATTGAGTATAACTGCTGC+TGG | 0.491203 | 4.2:-72853752 | MS.gene043090:CDS |
| CTAATTTAAGGTTGGAGCAA+TGG | 0.500486 | 4.2:-72853217 | MS.gene043090:intron |
| CTAATGCTATTGAGGGAAAG+TGG | 0.509443 | 4.2:-72852720 | MS.gene043090:CDS |
| GGTTGAAAATGGTATACATA+AGG | 0.511316 | 4.2:-72854002 | MS.gene043090:CDS |
| CGCAAACATAGCAAGGATCC+TGG | 0.518066 | 4.2:-72856207 | MS.gene043090:CDS |
| CGGGCAAATACTGGGTTACG+GGG | 0.520947 | 4.2:+72853696 | None:intergenic |
| GACGGGCAAATACTGGGTTA+CGG | 0.523874 | 4.2:+72853694 | None:intergenic |
| GTGCTGCTTACTGTATTACA+AGG | 0.530206 | 4.2:-72852747 | MS.gene043090:CDS |
| ACGAGAGCTTACACCGTGAA+GGG | 0.538658 | 4.2:-72858326 | MS.gene043090:CDS |
| AGAGTTGACGGGCAAATACT+GGG | 0.541627 | 4.2:+72853688 | None:intergenic |
| AAGGTTGGAGCAATGGCACA+TGG | 0.543720 | 4.2:-72853210 | MS.gene043090:CDS |
| GTATACCAAGAACATTCAAA+CGG | 0.555694 | 4.2:-72853939 | MS.gene043090:CDS |
| AGAACATTCAAACGGTTCGC+TGG | 0.560529 | 4.2:-72853931 | MS.gene043090:CDS |
| TGGAGCAATGGCACATGGGA+AGG | 0.561421 | 4.2:-72853205 | MS.gene043090:CDS |
| GGAGGAGTAATTGGAATACC+AGG | 0.567652 | 4.2:+72858143 | None:intergenic |
| CCAACCTGATGACAAATGTC+AGG | 0.572185 | 4.2:+72856174 | None:intergenic |
| AGAAGTCGCTAAAGTTGGCA+AGG | 0.584499 | 4.2:-72858060 | MS.gene043090:intron |
| GACGAGAGCTTACACCGTGA+AGG | 0.589055 | 4.2:-72858327 | MS.gene043090:CDS |
| TTTCCTCCGCAAACATAGCA+AGG | 0.593451 | 4.2:-72856214 | MS.gene043090:CDS |
| ACCAGGAAGTTCAGTTACAT+CGG | 0.602601 | 4.2:+72858160 | None:intergenic |
| ATGTCAGGCCTGTAATGACC+AGG | 0.605340 | 4.2:+72856189 | None:intergenic |
| ACAGCCCACTAAATGAAGCT+GGG | 0.616951 | 4.2:-72854026 | MS.gene043090:CDS |
| GATCCTTGCTATGTTTGCGG+AGG | 0.633807 | 4.2:+72856211 | None:intergenic |
| CGAGAGCTTACACCGTGAAG+GGG | 0.641989 | 4.2:-72858325 | MS.gene043090:CDS |
| AGGTTGGAGCAATGGCACAT+GGG | 0.675683 | 4.2:-72853209 | MS.gene043090:CDS |
| TAGGGAGTACCACAAAGACA+AGG | 0.712278 | 4.2:+72853299 | None:intergenic |
| GCCCACTAAATGAAGCTGGG+AGG | 0.723058 | 4.2:-72854023 | MS.gene043090:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAATTATAAAGAATTA+TGG | + | chr4.2:72855720-72855739 | None:intergenic | 10.0% |
| !! | ATAATTCAATATATAAAAAC+AGG | + | chr4.2:72853024-72853043 | None:intergenic | 10.0% |
| !! | GAATAAACAATTTATATAAA+AGG | + | chr4.2:72853123-72853142 | None:intergenic | 10.0% |
| !!! | GCATAATTTAATTTTTTTTT+TGG | - | chr4.2:72857197-72857216 | MS.gene043090:intron | 10.0% |
| !! | AAATTACTAAAATGAAAACA+AGG | + | chr4.2:72854010-72854029 | None:intergenic | 15.0% |
| !! | TTTATAGACTATATGAATTA+AGG | + | chr4.2:72854183-72854202 | None:intergenic | 15.0% |
| !!! | ATTTAATTTTTTTTTTGGTG+TGG | - | chr4.2:72857202-72857221 | MS.gene043090:intron | 15.0% |
| !!! | TACAATTGATAAAAACATTT+TGG | + | chr4.2:72854894-72854913 | None:intergenic | 15.0% |
| !!! | TGATACATTTCTAAAAATTA+AGG | - | chr4.2:72856854-72856873 | MS.gene043090:intron | 15.0% |
| !!! | TTATTTTAATCCTTAGTTTT+TGG | - | chr4.2:72855302-72855321 | MS.gene043090:intron | 15.0% |
| !! | AAAAATAAGTCAATCCAAAT+GGG | - | chr4.2:72853096-72853115 | MS.gene043090:intron | 20.0% |
| !! | AAATCGTAATTTAGAAAGAT+TGG | + | chr4.2:72855756-72855775 | None:intergenic | 20.0% |
| !! | AATCGTAATTTAGAAAGATT+GGG | + | chr4.2:72855755-72855774 | None:intergenic | 20.0% |
| !! | ACACACATAATTAAATCTAT+TGG | + | chr4.2:72855849-72855868 | None:intergenic | 20.0% |
| !! | ATATGATAATTGTTTATGAG+AGG | - | chr4.2:72854528-72854547 | MS.gene043090:intron | 20.0% |
| !! | ATCAAAGATATTGAAAGATA+AGG | - | chr4.2:72853241-72853260 | MS.gene043090:intron | 20.0% |
| !! | ATTAGAAAATGGATAAAGAT+AGG | + | chr4.2:72856023-72856042 | None:intergenic | 20.0% |
| !! | GATTATTTGTAGTAATTCTT+GGG | - | chr4.2:72856278-72856297 | MS.gene043090:intron | 20.0% |
| !! | TAAAAATAAGTCAATCCAAA+TGG | - | chr4.2:72853095-72853114 | MS.gene043090:intron | 20.0% |
| !! | TATGATGCTATCTTAAAATT+TGG | + | chr4.2:72856517-72856536 | None:intergenic | 20.0% |
| !! | TATTGAGAAACTAAGAAAAT+AGG | + | chr4.2:72853504-72853523 | None:intergenic | 20.0% |
| !! | TGATTATTTGTAGTAATTCT+TGG | - | chr4.2:72856277-72856296 | MS.gene043090:intron | 20.0% |
| !! | TGTGAATCAAATTATTGTTT+GGG | - | chr4.2:72855099-72855118 | MS.gene043090:intron | 20.0% |
| !!! | AAATTTTAAGATAGCATCAT+AGG | - | chr4.2:72856516-72856535 | MS.gene043090:intron | 20.0% |
| !!! | AATAGAATCTTTTTTGCTTT+TGG | - | chr4.2:72856325-72856344 | MS.gene043090:intron | 20.0% |
| !!! | CTATATAAAATGTTGTTTTC+AGG | - | chr4.2:72856973-72856992 | MS.gene043090:intron | 20.0% |
| !!! | CTTTTGAATGATCTAATTTA+AGG | - | chr4.2:72857811-72857830 | MS.gene043090:intron | 20.0% |
| !!! | GCAAATATTATCATATTTTG+AGG | - | chr4.2:72856911-72856930 | MS.gene043090:intron | 20.0% |
| !!! | TTTTCATATGAAGAAAATAG+TGG | + | chr4.2:72855577-72855596 | None:intergenic | 20.0% |
| ! | AAAACATGAAGAAAAGTGAT+TGG | + | chr4.2:72855480-72855499 | None:intergenic | 25.0% |
| ! | AAACACAACAGTATACAAAA+AGG | + | chr4.2:72857605-72857624 | None:intergenic | 25.0% |
| ! | AAATAGCAGTTATAAGTACA+AGG | + | chr4.2:72857534-72857553 | None:intergenic | 25.0% |
| ! | AACTTAGTATGTGATTGTTT+CGG | + | chr4.2:72853702-72853721 | None:intergenic | 25.0% |
| ! | AAGATAAACCTAACATTCAA+AGG | + | chr4.2:72857660-72857679 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAACATCTTA+TGG | + | chr4.2:72858036-72858055 | None:intergenic | 25.0% |
| ! | AATAGGATAGGATAAGTAAT+AGG | + | chr4.2:72855273-72855292 | None:intergenic | 25.0% |
| ! | AATCATCAACTGAGATAAAT+AGG | + | chr4.2:72857789-72857808 | None:intergenic | 25.0% |
| ! | AATTGTTTCCTTTGAATGTT+AGG | - | chr4.2:72857649-72857668 | MS.gene043090:intron | 25.0% |
| ! | ATAAGCTGAAAACATCTTAT+GGG | + | chr4.2:72858035-72858054 | None:intergenic | 25.0% |
| ! | ATAAGCTGTTTATCTGAATA+TGG | - | chr4.2:72853183-72853202 | MS.gene043090:CDS | 25.0% |
| ! | ATTTGATTCACAGTATTTGT+CGG | + | chr4.2:72855091-72855110 | None:intergenic | 25.0% |
| ! | CAAAATTGTACATTCTTTGA+GGG | + | chr4.2:72856253-72856272 | None:intergenic | 25.0% |
| ! | CACATGATAAGATTAGAAAA+TGG | + | chr4.2:72856034-72856053 | None:intergenic | 25.0% |
| ! | CATTTATCATATCATGTGTT+TGG | + | chr4.2:72855979-72855998 | None:intergenic | 25.0% |
| ! | CCTAATAGAATCAGATTTAA+GGG | + | chr4.2:72856084-72856103 | None:intergenic | 25.0% |
| ! | CGTTAAATCATCAAAAACAT+TGG | - | chr4.2:72854232-72854251 | MS.gene043090:intron | 25.0% |
| ! | CTAATAGAATCAGATTTAAG+GGG | + | chr4.2:72856083-72856102 | None:intergenic | 25.0% |
| ! | CTGTGAATCAAATTATTGTT+TGG | - | chr4.2:72855098-72855117 | MS.gene043090:intron | 25.0% |
| ! | CTTAATATATTTGTGCACAA+TGG | - | chr4.2:72858204-72858223 | MS.gene043090:CDS | 25.0% |
| ! | GAAAATTGTGCAAAAATGAT+TGG | + | chr4.2:72855654-72855673 | None:intergenic | 25.0% |
| ! | GAACAATAGAACAGAAAAAT+AGG | + | chr4.2:72856774-72856793 | None:intergenic | 25.0% |
| ! | GAATAGAATGAATAGTTACA+AGG | + | chr4.2:72853442-72853461 | None:intergenic | 25.0% |
| ! | GATGATTTAACGTTAACAAT+TGG | + | chr4.2:72854224-72854243 | None:intergenic | 25.0% |
| ! | GCTATCTTAAAATTTGGATT+AGG | + | chr4.2:72856511-72856530 | None:intergenic | 25.0% |
| ! | GGAAAACTTATGAAAAGAAA+GGG | + | chr4.2:72853873-72853892 | None:intergenic | 25.0% |
| ! | GTTAATACTATAGCATTGTA+GGG | + | chr4.2:72857485-72857504 | None:intergenic | 25.0% |
| ! | TAAAATAACAGAGAAGCAAT+AGG | + | chr4.2:72855290-72855309 | None:intergenic | 25.0% |
| ! | TACATAGATGATTATATAGC+TGG | - | chr4.2:72857869-72857888 | MS.gene043090:intron | 25.0% |
| ! | TATGATATTGAAACACAACA+TGG | - | chr4.2:72853208-72853227 | MS.gene043090:CDS | 25.0% |
| ! | TATTTATCATATTTAGCGTG+AGG | + | chr4.2:72855042-72855061 | None:intergenic | 25.0% |
| ! | TCCTAATAGAATCAGATTTA+AGG | + | chr4.2:72856085-72856104 | None:intergenic | 25.0% |
| ! | TGTTAATACTATAGCATTGT+AGG | + | chr4.2:72857486-72857505 | None:intergenic | 25.0% |
| !! | AAATAGTGGAAAATCGTAAA+TGG | + | chr4.2:72855563-72855582 | None:intergenic | 25.0% |
| !! | ATATGAATTAAGGCTTTGAT+TGG | + | chr4.2:72854173-72854192 | None:intergenic | 25.0% |
| !! | ATATTGCAAGACAATTTTGT+AGG | - | chr4.2:72856680-72856699 | MS.gene043090:intron | 25.0% |
| !! | ATTTTATCCTATCATGTGTT+TGG | + | chr4.2:72855926-72855945 | None:intergenic | 25.0% |
| !! | CCACTTATAAACACATTTTT+GGG | + | chr4.2:72856443-72856462 | None:intergenic | 25.0% |
| !! | TATGAATTAAGGCTTTGATT+GGG | + | chr4.2:72854172-72854191 | None:intergenic | 25.0% |
| !! | TATTGCAAGACAATTTTGTA+GGG | - | chr4.2:72856681-72856700 | MS.gene043090:intron | 25.0% |
| !! | TCCACTTATAAACACATTTT+TGG | + | chr4.2:72856444-72856463 | None:intergenic | 25.0% |
| !! | TGAATGATCTAATTTAAGGT+TGG | - | chr4.2:72857815-72857834 | MS.gene043090:intron | 25.0% |
| !! | TTGTTTCAAGGGTAAATTTT+TGG | - | chr4.2:72854349-72854368 | MS.gene043090:intron | 25.0% |
| !! | TTTTATACATATAAGCTTGC+AGG | + | chr4.2:72853410-72853429 | None:intergenic | 25.0% |
| !!! | ATTGATTGTGATTTGTTTCA+AGG | - | chr4.2:72854337-72854356 | MS.gene043090:intron | 25.0% |
| !!! | CATTCACTTTTCCTTAAATT+TGG | - | chr4.2:72857905-72857924 | MS.gene043090:intron | 25.0% |
| !!! | GTAGTCATTTTTTAAACCAT+TGG | + | chr4.2:72857406-72857425 | None:intergenic | 25.0% |
| !!! | TTGATTGTGATTTGTTTCAA+GGG | - | chr4.2:72854338-72854357 | MS.gene043090:intron | 25.0% |
| !!! | TTTAATCCTTAGTTTTTGGT+GGG | - | chr4.2:72855306-72855325 | MS.gene043090:intron | 25.0% |
| !!! | TTTGTTTTCATAAGCTATCT+AGG | + | chr4.2:72858071-72858090 | None:intergenic | 25.0% |
| !!! | TTTTAATCCTTAGTTTTTGG+TGG | - | chr4.2:72855305-72855324 | MS.gene043090:intron | 25.0% |
| AACAAAATCAGCTTAAAGGT+AGG | + | chr4.2:72856475-72856494 | None:intergenic | 30.0% | |
| AAGATTCACCATAACCTTTA+CGG | - | chr4.2:72855148-72855167 | MS.gene043090:intron | 30.0% | |
| AAGGATTACTAATGCTATTG+AGG | - | chr4.2:72858312-72858331 | MS.gene043090:CDS | 30.0% | |
| AAGTTGGCAAGGTAATTAAT+TGG | - | chr4.2:72852991-72853010 | MS.gene043090:intron | 30.0% | |
| AATTGTGCAAAAATGATTGG+AGG | + | chr4.2:72855651-72855670 | None:intergenic | 30.0% | |
| ACAAAATCAGCTTAAAGGTA+GGG | + | chr4.2:72856474-72856493 | None:intergenic | 30.0% | |
| AGGAATTTGAAAATTGAGCT+AGG | + | chr4.2:72857763-72857782 | None:intergenic | 30.0% | |
| AGGATTACTAATGCTATTGA+GGG | - | chr4.2:72858313-72858332 | MS.gene043090:CDS | 30.0% | |
| ATAGAACATGAAAAACGTTG+AGG | + | chr4.2:72855404-72855423 | None:intergenic | 30.0% | |
| ATTAAACGGTTATCCAAACA+AGG | - | chr4.2:72854608-72854627 | MS.gene043090:intron | 30.0% | |
| ATTTGACTGTGTTAACACTT+AGG | - | chr4.2:72857153-72857172 | MS.gene043090:intron | 30.0% | |
| ATTTGTGCACAATGGAAAAA+AGG | - | chr4.2:72858212-72858231 | MS.gene043090:CDS | 30.0% | |
| CAAGATTGAGAAGAAAATGA+TGG | + | chr4.2:72855823-72855842 | None:intergenic | 30.0% | |
| CCAAAATTGTACATTCTTTG+AGG | + | chr4.2:72856254-72856273 | None:intergenic | 30.0% | |
| CCCAAAAATGTGTTTATAAG+TGG | - | chr4.2:72856440-72856459 | MS.gene043090:intron | 30.0% | |
| CCCTTAAATCTGATTCTATT+AGG | - | chr4.2:72856081-72856100 | MS.gene043090:intron | 30.0% | |
| CTTTCGTTTGTATTAGAAAC+AGG | - | chr4.2:72854093-72854112 | MS.gene043090:intron | 30.0% | |
| GACAATACATTAAAGCTTTG+AGG | + | chr4.2:72856161-72856180 | None:intergenic | 30.0% | |
| GATATTGAAAGATAAGGAAG+AGG | - | chr4.2:72853247-72853266 | MS.gene043090:intron | 30.0% | |
| GGAATTTGAAAATTGAGCTA+GGG | + | chr4.2:72857762-72857781 | None:intergenic | 30.0% | |
| GGGAAAACTTATGAAAAGAA+AGG | + | chr4.2:72853874-72853893 | None:intergenic | 30.0% | |
| GGTTGAAAATGGTATACATA+AGG | - | chr4.2:72857038-72857057 | MS.gene043090:intron | 30.0% | |
| GTATACATAAGGACTGAAAA+AGG | - | chr4.2:72857049-72857068 | MS.gene043090:intron | 30.0% | |
| GTATACCAAGAACATTCAAA+CGG | - | chr4.2:72857101-72857120 | MS.gene043090:intron | 30.0% | |
| GTTCTTGGTATACGAATATA+GGG | + | chr4.2:72857094-72857113 | None:intergenic | 30.0% | |
| TCAGAAAACACAATGAAGTA+AGG | + | chr4.2:72858249-72858268 | None:intergenic | 30.0% | |
| TGATTGGAATTGATATCGAT+TGG | + | chr4.2:72855464-72855483 | None:intergenic | 30.0% | |
| TGGATAACCGTTTAATAAAG+CGG | + | chr4.2:72854604-72854623 | None:intergenic | 30.0% | |
| TGTTCTTGGTATACGAATAT+AGG | + | chr4.2:72857095-72857114 | None:intergenic | 30.0% | |
| TTATGAGTTAGTTACAAGTG+TGG | - | chr4.2:72853343-72853362 | MS.gene043090:CDS | 30.0% | |
| TTCATTCACATAGTCTCTAA+AGG | - | chr4.2:72854633-72854652 | MS.gene043090:intron | 30.0% | |
| TTTAAGGAAAAGTGAATGCA+AGG | + | chr4.2:72857903-72857922 | None:intergenic | 30.0% | |
| TTTAGAGACTATGTGAATGA+AGG | + | chr4.2:72854634-72854653 | None:intergenic | 30.0% | |
| TTTATATAAAAGGGCCCATT+TGG | + | chr4.2:72853113-72853132 | None:intergenic | 30.0% | |
| ! | ATTGATTTCACAGAAAGTAG+AGG | - | chr4.2:72854439-72854458 | MS.gene043090:intron | 30.0% |
| ! | CCTCAAAGAATGTACAATTT+TGG | - | chr4.2:72856251-72856270 | MS.gene043090:CDS | 30.0% |
| ! | CTATTCTTTTCATTCAAAGG+AGG | + | chr4.2:72852918-72852937 | None:intergenic | 30.0% |
| ! | GATTGGAATTGATATCGATT+GGG | + | chr4.2:72855463-72855482 | None:intergenic | 30.0% |
| ! | GCTATAACCGCTTTATTAAA+CGG | - | chr4.2:72854594-72854613 | MS.gene043090:intron | 30.0% |
| ! | TAGTTATTGTTGTTGTCCAA+TGG | - | chr4.2:72857387-72857406 | MS.gene043090:intron | 30.0% |
| ! | TCATAACCGAGTCAAAATTT+TGG | + | chr4.2:72856355-72856374 | None:intergenic | 30.0% |
| ! | TCGCTATTCTTTTCATTCAA+AGG | + | chr4.2:72852921-72852940 | None:intergenic | 30.0% |
| ! | TTCTGAAGATTTGGTTTCTT+CGG | + | chr4.2:72852822-72852841 | None:intergenic | 30.0% |
| !! | ACCTTTAAGCTGATTTTGTT+GGG | - | chr4.2:72856475-72856494 | MS.gene043090:intron | 30.0% |
| !! | TACAAGGTGTTGTTAAATAG+TGG | + | chr4.2:72857518-72857537 | None:intergenic | 30.0% |
| !! | TACCTTTAAGCTGATTTTGT+TGG | - | chr4.2:72856474-72856493 | MS.gene043090:intron | 30.0% |
| !! | TTTGATAGCTTTATGCTATC+TGG | + | chr4.2:72855339-72855358 | None:intergenic | 30.0% |
| !! | TTTTAACTAGCAAAGATCTC+AGG | - | chr4.2:72854412-72854431 | MS.gene043090:intron | 30.0% |
| !!! | GTTACTTTTGTAGTTTCTGT+TGG | + | chr4.2:72852861-72852880 | None:intergenic | 30.0% |
| !!! | TGATTTTGTTGGGTTGATTA+AGG | - | chr4.2:72856485-72856504 | MS.gene043090:intron | 30.0% |
| AAATTGAGTATAACTGCTGC+TGG | - | chr4.2:72857288-72857307 | MS.gene043090:intron | 35.0% | |
| ACATCTTATGGGATGTCAAA+AGG | + | chr4.2:72858024-72858043 | None:intergenic | 35.0% | |
| ACCCAACAAAATCAGCTTAA+AGG | + | chr4.2:72856479-72856498 | None:intergenic | 35.0% | |
| ACGCTCAAGATATACAGAAT+TGG | - | chr4.2:72856581-72856600 | MS.gene043090:intron | 35.0% | |
| AGCAGCATAAACATCAAACT+AGG | + | chr4.2:72854936-72854955 | None:intergenic | 35.0% | |
| ATCTTATAGTTCAGAGAAGC+TGG | - | chr4.2:72857675-72857694 | MS.gene043090:intron | 35.0% | |
| ATTTCCTTCCCCAATCAATT+TGG | - | chr4.2:72855513-72855532 | MS.gene043090:intron | 35.0% | |
| CAAAATCAGCTTAAAGGTAG+GGG | + | chr4.2:72856473-72856492 | None:intergenic | 35.0% | |
| CAACTGAGATAAATAGGCAA+AGG | + | chr4.2:72857783-72857802 | None:intergenic | 35.0% | |
| CAAGAAAGCAAATCTCTAGA+AGG | - | chr4.2:72853299-72853318 | MS.gene043090:intron | 35.0% | |
| CGCTCAAGATATACAGAATT+GGG | - | chr4.2:72856582-72856601 | MS.gene043090:intron | 35.0% | |
| CTCACATAAATGATTGACGT+TGG | - | chr4.2:72854278-72854297 | MS.gene043090:intron | 35.0% | |
| CTCCTACTTATAACACTTTC+AGG | + | chr4.2:72856651-72856670 | None:intergenic | 35.0% | |
| GATCGCAGAAAATAACAGTT+CGG | - | chr4.2:72857446-72857465 | MS.gene043090:intron | 35.0% | |
| GTAAGCTGTTTATCCAAACA+AGG | + | chr4.2:72853904-72853923 | None:intergenic | 35.0% | |
| TAACAGAGAAGCAATAGGAT+AGG | + | chr4.2:72855285-72855304 | None:intergenic | 35.0% | |
| TAAGCATTTGTGAGACTGTT+TGG | - | chr4.2:72857981-72858000 | MS.gene043090:intron | 35.0% | |
| TACAGTAAGCAGCACTTAAT+TGG | + | chr4.2:72858288-72858307 | None:intergenic | 35.0% | |
| TAGTCTTCGGACCAAATTTA+AGG | + | chr4.2:72857919-72857938 | None:intergenic | 35.0% | |
| TATCCAAACAAGGCTTATCT+GGG | + | chr4.2:72853894-72853913 | None:intergenic | 35.0% | |
| TCAAATTAGCCAATCCAAAC+AGG | + | chr4.2:72857946-72857965 | None:intergenic | 35.0% | |
| TCATTCAAAGGAGGAGTAAT+TGG | + | chr4.2:72852909-72852928 | None:intergenic | 35.0% | |
| TCCTACTTAAATCCGTTGTT+TGG | - | chr4.2:72855220-72855239 | MS.gene043090:intron | 35.0% | |
| TGGAATTGTCGACAAATACT+TGG | + | chr4.2:72857710-72857729 | None:intergenic | 35.0% | |
| TGTTAACCCACCAAAAACTA+AGG | + | chr4.2:72855315-72855334 | None:intergenic | 35.0% | |
| TTATCCAAACAAGGCTTATC+TGG | + | chr4.2:72853895-72853914 | None:intergenic | 35.0% | |
| TTATGCTGCTAGATACTACT+AGG | - | chr4.2:72854946-72854965 | MS.gene043090:intron | 35.0% | |
| ! | ACCAAACAACGGATTTAAGT+AGG | + | chr4.2:72855224-72855243 | None:intergenic | 35.0% |
| ! | ATAGGCTATCCAAGATTTTG+TGG | - | chr4.2:72856534-72856553 | MS.gene043090:intron | 35.0% |
| ! | CTAATTTAAGGTTGGAGCAA+TGG | - | chr4.2:72857823-72857842 | MS.gene043090:intron | 35.0% |
| ! | GCATATGTGTCTGTTTGTTT+TGG | - | chr4.2:72853581-72853600 | MS.gene043090:intron | 35.0% |
| ! | TAACCGAGTCAAAATTTTGG+TGG | + | chr4.2:72856352-72856371 | None:intergenic | 35.0% |
| ! | TAGGCTATCCAAGATTTTGT+GGG | - | chr4.2:72856535-72856554 | MS.gene043090:intron | 35.0% |
| ! | TCTTTAGAAGTCGCTAAAGT+TGG | - | chr4.2:72852975-72852994 | MS.gene043090:intron | 35.0% |
| ! | TGTTTTCGTATAAGCTGTTC+TGG | + | chr4.2:72853555-72853574 | None:intergenic | 35.0% |
| ! | TGTTTTCTGATTGCAGTTTC+TGG | - | chr4.2:72858259-72858278 | MS.gene043090:CDS | 35.0% |
| ! | TTAGTGTTTTCCCGATTCAA+GGG | + | chr4.2:72854981-72855000 | None:intergenic | 35.0% |
| ! | TTTAGTGTTTTCCCGATTCA+AGG | + | chr4.2:72854982-72855001 | None:intergenic | 35.0% |
| !! | AACTTATTTTCACGTGCCTT+GGG | - | chr4.2:72854037-72854056 | MS.gene043090:CDS | 35.0% |
| !! | CTTCTTCATCTTGTTGTTCA+TGG | + | chr4.2:72852779-72852798 | None:intergenic | 35.0% |
| !! | GACCTGAAAGTGTTATAAGT+AGG | - | chr4.2:72856646-72856665 | MS.gene043090:intron | 35.0% |
| !! | TGAAAAAGGTGTTCTGATAG+AGG | - | chr4.2:72857063-72857082 | MS.gene043090:intron | 35.0% |
| !!! | TATACATTGCTGTTTTGCAG+TGG | - | chr4.2:72857254-72857273 | MS.gene043090:intron | 35.0% |
| !!! | TATGTGTCTGTTTGTTTTGG+TGG | - | chr4.2:72853584-72853603 | MS.gene043090:intron | 35.0% |
| ACAAAAACGAGACGAAGTCT+TGG | - | chr4.2:72856877-72856896 | MS.gene043090:intron | 40.0% | |
| ACCAGGAAGTTCAGTTACAT+CGG | + | chr4.2:72852883-72852902 | None:intergenic | 40.0% | |
| ACCTTTAGCTAAGCTAAGCA+CGG | - | chr4.2:72856120-72856139 | MS.gene043090:intron | 40.0% | |
| ACGTTGCTAACGAATGTACT+TGG | - | chr4.2:72855012-72855031 | MS.gene043090:intron | 40.0% | |
| AGCACTGTGTATACTATTGC+TGG | - | chr4.2:72856801-72856820 | MS.gene043090:intron | 40.0% | |
| ATACAGAATTGGGTGTGAGA+GGG | - | chr4.2:72856592-72856611 | MS.gene043090:intron | 40.0% | |
| ATAGCAAGCCCACAAAATCT+TGG | + | chr4.2:72856546-72856565 | None:intergenic | 40.0% | |
| CAAAAACGAGACGAAGTCTT+GGG | - | chr4.2:72856878-72856897 | MS.gene043090:intron | 40.0% | |
| CAAGCCTCTTAAAGACACAA+TGG | - | chr4.2:72853663-72853682 | MS.gene043090:intron | 40.0% | |
| CTAATGCTATTGAGGGAAAG+TGG | - | chr4.2:72858320-72858339 | MS.gene043090:CDS | 40.0% | |
| CTTAAGCGCGTATATGATGA+GGG | - | chr4.2:72853832-72853851 | MS.gene043090:intron | 40.0% | |
| CTTGGAACGTGAAAATACAG+AGG | + | chr4.2:72853647-72853666 | None:intergenic | 40.0% | |
| GACTAAAAGCCTGTTTGGAT+TGG | - | chr4.2:72857934-72857953 | MS.gene043090:intron | 40.0% | |
| GATTGGGGAAGGAAATCTAT+TGG | + | chr4.2:72855509-72855528 | None:intergenic | 40.0% | |
| GCAAAGATGTTGTGATGCTA+TGG | - | chr4.2:72854729-72854748 | MS.gene043090:intron | 40.0% | |
| TATACAGAATTGGGTGTGAG+AGG | - | chr4.2:72856591-72856610 | MS.gene043090:intron | 40.0% | |
| TCTTAAGCGCGTATATGATG+AGG | - | chr4.2:72853831-72853850 | MS.gene043090:intron | 40.0% | |
| TCTTGCATGACAAGTAAAGC+TGG | + | chr4.2:72853284-72853303 | None:intergenic | 40.0% | |
| TGTACACACACAGAAAGTAG+AGG | - | chr4.2:72854479-72854498 | MS.gene043090:intron | 40.0% | |
| TTTCCTCAAAAGCCCTTTGA+GGG | + | chr4.2:72856832-72856851 | None:intergenic | 40.0% | |
| ! | AGATTTGGTTTCTTCGGTGT+TGG | + | chr4.2:72852816-72852835 | None:intergenic | 40.0% |
| ! | CATTGTGTCTTTAAGAGGCT+TGG | + | chr4.2:72853665-72853684 | None:intergenic | 40.0% |
| ! | TAGTGTTTTCCCGATTCAAG+GGG | + | chr4.2:72854980-72854999 | None:intergenic | 40.0% |
| ! | TTTTCCTCAAAAGCCCTTTG+AGG | + | chr4.2:72856833-72856852 | None:intergenic | 40.0% |
| !! | ACTTATTTTCACGTGCCTTG+GGG | - | chr4.2:72854038-72854057 | MS.gene043090:CDS | 40.0% |
| !! | ATGTGAATGAAGGCCTTGTT+TGG | + | chr4.2:72854624-72854643 | None:intergenic | 40.0% |
| !! | CAACTTATTTTCACGTGCCT+TGG | - | chr4.2:72854036-72854055 | MS.gene043090:CDS | 40.0% |
| !! | CCAAACAGGCTTTTAGTCTT+CGG | + | chr4.2:72857932-72857951 | None:intergenic | 40.0% |
| !! | GGTTCATCGTTCTGAAGATT+TGG | + | chr4.2:72852831-72852850 | None:intergenic | 40.0% |
| !! | GTGCTGCTTACTGTATTACA+AGG | - | chr4.2:72858293-72858312 | MS.gene043090:CDS | 40.0% |
| !! | TTTCCCAGATAAGCCTTGTT+TGG | - | chr4.2:72853888-72853907 | MS.gene043090:intron | 40.0% |
| !!! | GATTTTGTGGGCTTGCTATT+AGG | - | chr4.2:72856547-72856566 | MS.gene043090:intron | 40.0% |
| !!! | GGTCCACCAAAATTTTGACT+CGG | - | chr4.2:72856346-72856365 | MS.gene043090:intron | 40.0% |
| !!! | TTTCATTTTAGCTACCCCCA+AGG | + | chr4.2:72854056-72854075 | None:intergenic | 40.0% |
| AACCTCCCAGCTTCATTTAG+TGG | + | chr4.2:72857022-72857041 | None:intergenic | 45.0% | |
| AAGACAAGGTCCTGATTGCT+TGG | + | chr4.2:72857730-72857749 | None:intergenic | 45.0% | |
| AAGCTATCTAGGAGAGCTTG+TGG | + | chr4.2:72858060-72858079 | None:intergenic | 45.0% | |
| ACAGCCCACTAAATGAAGCT+GGG | - | chr4.2:72857014-72857033 | MS.gene043090:intron | 45.0% | |
| ACCGATGTAACTGAACTTCC+TGG | - | chr4.2:72852879-72852898 | MS.gene043090:intron | 45.0% | |
| ACCGCCATTGTGTCTTTAAG+AGG | + | chr4.2:72853670-72853689 | None:intergenic | 45.0% | |
| ACCGTGCTTAGCTTAGCTAA+AGG | + | chr4.2:72856124-72856143 | None:intergenic | 45.0% | |
| ACCTCCCAGCTTCATTTAGT+GGG | + | chr4.2:72857021-72857040 | None:intergenic | 45.0% | |
| AGAACATTCAAACGGTTCGC+TGG | - | chr4.2:72857109-72857128 | MS.gene043090:intron | 45.0% | |
| AGAAGTCGCTAAAGTTGGCA+AGG | - | chr4.2:72852980-72852999 | MS.gene043090:intron | 45.0% | |
| AGGTCGTATCTCATCCAATG+TGG | + | chr4.2:72856631-72856650 | None:intergenic | 45.0% | |
| ATCAGATTTAAGGGGCCGTT+TGG | + | chr4.2:72856075-72856094 | None:intergenic | 45.0% | |
| ATCCTATCATGCGCACCAAA+CGG | - | chr4.2:72856057-72856076 | MS.gene043090:intron | 45.0% | |
| CAAACGGACCGTAAAGGTTA+TGG | + | chr4.2:72855159-72855178 | None:intergenic | 45.0% | |
| CAATCAGGACCTTGTCTTTG+TGG | - | chr4.2:72857732-72857751 | MS.gene043090:intron | 45.0% | |
| CATAACCTTTACGGTCCGTT+TGG | - | chr4.2:72855157-72855176 | MS.gene043090:intron | 45.0% | |
| CCAACCTGATGACAAATGTC+AGG | + | chr4.2:72854869-72854888 | None:intergenic | 45.0% | |
| CCGAAGACTAAAAGCCTGTT+TGG | - | chr4.2:72857929-72857948 | MS.gene043090:intron | 45.0% | |
| CCTACTGATGCACCAAACAA+CGG | + | chr4.2:72855235-72855254 | None:intergenic | 45.0% | |
| CCTGACATTTGTCATCAGGT+TGG | - | chr4.2:72854866-72854885 | MS.gene043090:intron | 45.0% | |
| GAAAACAGACCCCTTGAATC+GGG | - | chr4.2:72854968-72854987 | MS.gene043090:intron | 45.0% | |
| GCCTCTTAAAGACACAATGG+CGG | - | chr4.2:72853666-72853685 | MS.gene043090:intron | 45.0% | |
| GCGAACCGTTTGAATGTTCT+TGG | + | chr4.2:72857109-72857128 | None:intergenic | 45.0% | |
| GCTTAGCTTAGCTAAAGGTG+AGG | + | chr4.2:72856119-72856138 | None:intergenic | 45.0% | |
| GGAAAACAGACCCCTTGAAT+CGG | - | chr4.2:72854967-72854986 | MS.gene043090:intron | 45.0% | |
| GGAGGAGTAATTGGAATACC+AGG | + | chr4.2:72852900-72852919 | None:intergenic | 45.0% | |
| GGTCGTATCTCATCCAATGT+GGG | + | chr4.2:72856630-72856649 | None:intergenic | 45.0% | |
| GTCGACAATTCCAAGCAATC+AGG | - | chr4.2:72857717-72857736 | MS.gene043090:intron | 45.0% | |
| GTGCAGCAGCCAAATTGATT+GGG | + | chr4.2:72855525-72855544 | None:intergenic | 45.0% | |
| TGAAGCTGGGAGGTTGAAAA+TGG | - | chr4.2:72857027-72857046 | MS.gene043090:intron | 45.0% | |
| TGCAGCAGCCAAATTGATTG+GGG | + | chr4.2:72855524-72855543 | None:intergenic | 45.0% | |
| TGGGGAAGGAAATCTATTGG+AGG | + | chr4.2:72855506-72855525 | None:intergenic | 45.0% | |
| TGTGCAGCAGCCAAATTGAT+TGG | + | chr4.2:72855526-72855545 | None:intergenic | 45.0% | |
| TTCTTATCCTGCGCACCAAA+CGG | + | chr4.2:72855175-72855194 | None:intergenic | 45.0% | |
| TTGTTCATGGTCGTGCTTTG+TGG | + | chr4.2:72852766-72852785 | None:intergenic | 45.0% | |
| TTTCCTCCGCAAACATAGCA+AGG | - | chr4.2:72854826-72854845 | MS.gene043090:intron | 45.0% | |
| TTTGGCTGCTGCACATGAAT+TGG | - | chr4.2:72855531-72855550 | MS.gene043090:intron | 45.0% | |
| ! | ACGCGCATTCTCTATTTCTC+AGG | - | chr4.2:72855358-72855377 | MS.gene043090:intron | 45.0% |
| ! | AGAGTTGACGGGCAAATACT+GGG | + | chr4.2:72857355-72857374 | None:intergenic | 45.0% |
| ! | CAGGATCCTTGCTATGTTTG+CGG | + | chr4.2:72854835-72854854 | None:intergenic | 45.0% |
| ! | GTACATTCTTTGAGGGAGAG+AGG | + | chr4.2:72856246-72856265 | None:intergenic | 45.0% |
| ! | GTGTGTTTAGAGTCCCACAT+TGG | - | chr4.2:72856614-72856633 | MS.gene043090:intron | 45.0% |
| ! | TGTCGGTTAATGCAGTCGAA+TGG | + | chr4.2:72855074-72855093 | None:intergenic | 45.0% |
| ! | TTACGGGGTTTTTGATCGTG+CGG | + | chr4.2:72857332-72857351 | None:intergenic | 45.0% |
| !! | ACCTGCTTTTCGAGAGTTGA+CGG | + | chr4.2:72857367-72857386 | None:intergenic | 45.0% |
| !! | CTTATTTTCACGTGCCTTGG+GGG | - | chr4.2:72854039-72854058 | MS.gene043090:CDS | 45.0% |
| !! | GTTTGGTGCATCAGTAGGAA+AGG | - | chr4.2:72855237-72855256 | MS.gene043090:intron | 45.0% |
| !! | TAGGGAGTACCACAAAGACA+AGG | + | chr4.2:72857744-72857763 | None:intergenic | 45.0% |
| !! | TGGTGGTGGATATGTGTGTT+TGG | - | chr4.2:72853601-72853620 | MS.gene043090:intron | 45.0% |
| !!! | CTTTCGCTTTTTCCCCTTCA+CGG | + | chr4.2:72852730-72852749 | None:intergenic | 45.0% |
| !!! | GTGTCTGTTTGTTTTGGTGG+TGG | - | chr4.2:72853587-72853606 | MS.gene043090:intron | 45.0% |
| !! | AATAAACAATTTATATAAAA+GGG | + | chr4.2:72853122-72853141 | None:intergenic | 5.0% |
| AAACGAGACGAAGTCTTGGG+TGG | - | chr4.2:72856881-72856900 | MS.gene043090:intron | 50.0% | |
| AAGGTTGGAGCAATGGCACA+TGG | - | chr4.2:72857830-72857849 | MS.gene043090:intron | 50.0% | |
| ACGAGAGCTTACACCGTGAA+GGG | - | chr4.2:72852714-72852733 | MS.gene043090:CDS | 50.0% | |
| ACGGGCAAATACTGGGTTAC+GGG | + | chr4.2:72857348-72857367 | None:intergenic | 50.0% | |
| AGAGAGGAACCCTTCCAATC+AGG | + | chr4.2:72856230-72856249 | None:intergenic | 50.0% | |
| AGGTTGGAGCAATGGCACAT+GGG | - | chr4.2:72857831-72857850 | MS.gene043090:intron | 50.0% | |
| ATGTCAGGCCTGTAATGACC+AGG | + | chr4.2:72854854-72854873 | None:intergenic | 50.0% | |
| ATTGCTGGCATCTCCCTCAA+AGG | - | chr4.2:72856816-72856835 | MS.gene043090:intron | 50.0% | |
| CAGGCCTGACATTTGTCATC+AGG | - | chr4.2:72854862-72854881 | MS.gene043090:intron | 50.0% | |
| CGCAAACATAGCAAGGATCC+TGG | - | chr4.2:72854833-72854852 | MS.gene043090:intron | 50.0% | |
| CTACCATGGCCTGATTGGAA+GGG | - | chr4.2:72856218-72856237 | MS.gene043090:CDS | 50.0% | |
| CTGTGCGCCAAACACATGAT+AGG | - | chr4.2:72855916-72855935 | MS.gene043090:intron | 50.0% | |
| GACAGCCCACTAAATGAAGC+TGG | - | chr4.2:72857013-72857032 | MS.gene043090:intron | 50.0% | |
| GACGGGCAAATACTGGGTTA+CGG | + | chr4.2:72857349-72857368 | None:intergenic | 50.0% | |
| GCAAGGATCCTGGTCATTAC+AGG | - | chr4.2:72854843-72854862 | MS.gene043090:intron | 50.0% | |
| GCAGCCAAATTGATTGGGGA+AGG | + | chr4.2:72855520-72855539 | None:intergenic | 50.0% | |
| GTAGTTTCTGTTGGCGCACT+TGG | + | chr4.2:72852852-72852871 | None:intergenic | 50.0% | |
| TATCTTGAGCGTGATCCGAG+TGG | + | chr4.2:72856573-72856592 | None:intergenic | 50.0% | |
| TCTTGTTCCACAGCCTACCA+TGG | - | chr4.2:72856204-72856223 | MS.gene043090:CDS | 50.0% | |
| TTGCTGGCATCTCCCTCAAA+GGG | - | chr4.2:72856817-72856836 | MS.gene043090:intron | 50.0% | |
| ! | GAGAGTTGACGGGCAAATAC+TGG | + | chr4.2:72857356-72857375 | None:intergenic | 50.0% |
| ! | GATCCTTGCTATGTTTGCGG+AGG | + | chr4.2:72854832-72854851 | None:intergenic | 50.0% |
| ! | TCTCCCTCAAAGGGCTTTTG+AGG | - | chr4.2:72856826-72856845 | MS.gene043090:intron | 50.0% |
| !! | CCGTTGTTTGGTGCATCAGT+AGG | - | chr4.2:72855232-72855251 | MS.gene043090:intron | 50.0% |
| !! | CCTGCTTTTCGAGAGTTGAC+GGG | + | chr4.2:72857366-72857385 | None:intergenic | 50.0% |
| AATCAGGCCATGGTAGGCTG+TGG | + | chr4.2:72856214-72856233 | None:intergenic | 55.0% | |
| ACAGCCTACCATGGCCTGAT+TGG | - | chr4.2:72856213-72856232 | MS.gene043090:CDS | 55.0% | |
| ACGTTGAGGCTGAGAGTCGA+AGG | + | chr4.2:72855390-72855409 | None:intergenic | 55.0% | |
| CCCGTCAACTCTCGAAAAGC+AGG | - | chr4.2:72857363-72857382 | MS.gene043090:intron | 55.0% | |
| CCTACCATGGCCTGATTGGA+AGG | - | chr4.2:72856217-72856236 | MS.gene043090:CDS | 55.0% | |
| CCTTCCAATCAGGCCATGGT+AGG | + | chr4.2:72856220-72856239 | None:intergenic | 55.0% | |
| CGAGAGCTTACACCGTGAAG+GGG | - | chr4.2:72852715-72852734 | MS.gene043090:CDS | 55.0% | |
| CGGGCAAATACTGGGTTACG+GGG | + | chr4.2:72857347-72857366 | None:intergenic | 55.0% | |
| GAACCCTTCCAATCAGGCCA+TGG | + | chr4.2:72856224-72856243 | None:intergenic | 55.0% | |
| GACGAGAGCTTACACCGTGA+AGG | - | chr4.2:72852713-72852732 | MS.gene043090:CDS | 55.0% | |
| GCCCACTAAATGAAGCTGGG+AGG | - | chr4.2:72857017-72857036 | MS.gene043090:intron | 55.0% | |
| GGTGCGCAGGATAAGAAGAC+AGG | - | chr4.2:72855178-72855197 | MS.gene043090:intron | 55.0% | |
| TGGAGCAATGGCACATGGGA+AGG | - | chr4.2:72857835-72857854 | MS.gene043090:intron | 55.0% | |
| TTGAGGCTGAGAGTCGAAGG+AGG | + | chr4.2:72855387-72855406 | None:intergenic | 55.0% | |
| !! | GGGCTTGCTATTAGGCCACT+CGG | - | chr4.2:72856555-72856574 | MS.gene043090:intron | 55.0% |
| GCGCACCAAACGGACCGTAA+AGG | + | chr4.2:72855165-72855184 | None:intergenic | 60.0% | |
| !! | GGCCGTTTGGTGCGCATGAT+AGG | + | chr4.2:72856062-72856081 | None:intergenic | 60.0% |
| !! | TTACGGTCCGTTTGGTGCGC+AGG | - | chr4.2:72855165-72855184 | MS.gene043090:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 72852711 | 72858351 | 72852711 | ID=MS.gene043090 |
| chr4.2 | mRNA | 72852711 | 72858351 | 72852711 | ID=MS.gene043090.t1;Parent=MS.gene043090 |
| chr4.2 | exon | 72858061 | 72858351 | 72858061 | ID=MS.gene043090.t1.exon1;Parent=MS.gene043090.t1 |
| chr4.2 | CDS | 72858061 | 72858351 | 72858061 | ID=cds.MS.gene043090.t1;Parent=MS.gene043090.t1 |
| chr4.2 | exon | 72856179 | 72856271 | 72856179 | ID=MS.gene043090.t1.exon2;Parent=MS.gene043090.t1 |
| chr4.2 | CDS | 72856179 | 72856271 | 72856179 | ID=cds.MS.gene043090.t1;Parent=MS.gene043090.t1 |
| chr4.2 | exon | 72853923 | 72854067 | 72853923 | ID=MS.gene043090.t1.exon3;Parent=MS.gene043090.t1 |
| chr4.2 | CDS | 72853923 | 72854067 | 72853923 | ID=cds.MS.gene043090.t1;Parent=MS.gene043090.t1 |
| chr4.2 | exon | 72853678 | 72853788 | 72853678 | ID=MS.gene043090.t1.exon4;Parent=MS.gene043090.t1 |
| chr4.2 | CDS | 72853678 | 72853788 | 72853678 | ID=cds.MS.gene043090.t1;Parent=MS.gene043090.t1 |
| chr4.2 | exon | 72853309 | 72853391 | 72853309 | ID=MS.gene043090.t1.exon5;Parent=MS.gene043090.t1 |
| chr4.2 | CDS | 72853309 | 72853391 | 72853309 | ID=cds.MS.gene043090.t1;Parent=MS.gene043090.t1 |
| chr4.2 | exon | 72853172 | 72853229 | 72853172 | ID=MS.gene043090.t1.exon6;Parent=MS.gene043090.t1 |
| chr4.2 | CDS | 72853172 | 72853229 | 72853172 | ID=cds.MS.gene043090.t1;Parent=MS.gene043090.t1 |
| chr4.2 | exon | 72852711 | 72852787 | 72852711 | ID=MS.gene043090.t1.exon7;Parent=MS.gene043090.t1 |
| chr4.2 | CDS | 72852711 | 72852787 | 72852711 | ID=cds.MS.gene043090.t1;Parent=MS.gene043090.t1 |
| Gene Sequence |
| Protein sequence |
