Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene012655.t1 | XP_003610453.1 | 97.1 | 646 | 19 | 0 | 1 | 646 | 1 | 646 | 0.00E+00 | 1245.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene012655.t1 | Q9NYH9 | 25.1 | 662 | 401 | 20 | 1 | 642 | 1 | 587 | 1.7e-45 | 185.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene012655.t1 | G7JJ94 | 97.1 | 646 | 19 | 0 | 1 | 646 | 1 | 646 | 0.0e+00 | 1245.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene012655.t1 | MTR_4g132340 | 97.059 | 646 | 19 | 0 | 1 | 646 | 1 | 646 | 0.0 | 1297 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene012655.t1 | AT4G28200 | 57.339 | 654 | 259 | 5 | 1 | 641 | 1 | 647 | 0.0 | 764 |
Find 142 sgRNAs with CRISPR-Local
Find 364 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATGACTTGCATAAAATTTA+AGG | 0.072372 | 8.1:+1740848 | None:intergenic |
ATATTGGGTTCTTCATCTTT+AGG | 0.158287 | 8.1:+1743035 | None:intergenic |
TATTGGGTTCTTCATCTTTA+GGG | 0.188228 | 8.1:+1743036 | None:intergenic |
GGAGATTTCTGTTCTTTCTT+TGG | 0.205138 | 8.1:-1740803 | MS.gene012655:CDS |
CAGTGCAGTTATGGGAATTA+AGG | 0.210628 | 8.1:-1742842 | MS.gene012655:CDS |
CCTGAGGAATTAAAATTTCT+TGG | 0.225012 | 8.1:+1743427 | None:intergenic |
ACTTGCTTTGAAGCGCTATA+AGG | 0.277394 | 8.1:-1745004 | MS.gene012655:CDS |
GCAAGCCAGTCCCAGAATTC+TGG | 0.277657 | 8.1:+1743489 | None:intergenic |
TTTCAACCGAACCAGAATTC+TGG | 0.284378 | 8.1:-1743500 | MS.gene012655:CDS |
TTGTTCTTCTTTGATTCATC+TGG | 0.286830 | 8.1:+1743699 | None:intergenic |
ATCCAAACTCCTGGAACCTT+TGG | 0.310550 | 8.1:+1744014 | None:intergenic |
ATTTGGTCAAAATTTGTCTA+AGG | 0.312536 | 8.1:+1742742 | None:intergenic |
ATGACCAAAATGTTGACTTT+TGG | 0.312802 | 8.1:-1740441 | MS.gene012655:CDS |
CTCACCCAAGGCAACCTTCC+TGG | 0.322100 | 8.1:+1743842 | None:intergenic |
CACCATAGACAGTTCGAAAA+AGG | 0.323080 | 8.1:+1743649 | None:intergenic |
GATGAAGAACCCAATATAGA+TGG | 0.325914 | 8.1:-1743029 | MS.gene012655:CDS |
AAGCTTTGCTACCAGTTTCC+TGG | 0.328198 | 8.1:+1742887 | None:intergenic |
CTTGCCAAAAGTCAACATTT+TGG | 0.336551 | 8.1:+1740437 | None:intergenic |
AGGCACTTGCAAATCTTGTT+AGG | 0.337032 | 8.1:-1744043 | MS.gene012655:CDS |
GCCCAACATCAGAAGACCTT+TGG | 0.346201 | 8.1:-1743911 | MS.gene012655:CDS |
CAACCCAGCGAAATCAGATT+TGG | 0.346257 | 8.1:+1745050 | None:intergenic |
ACCCAAAGGTTCCAGGAGTT+TGG | 0.346506 | 8.1:-1744016 | MS.gene012655:CDS |
CTGATTTCGCTGGGTTGGTT+AGG | 0.353723 | 8.1:-1745044 | MS.gene012655:CDS |
GTTCTTTCTTTGGCTAAAGA+TGG | 0.356533 | 8.1:-1740793 | MS.gene012655:CDS |
AGGCCAGAGATATCTATAAA+AGG | 0.360971 | 8.1:-1740699 | MS.gene012655:intron |
CCCAACATCAGAAGACCTTT+GGG | 0.371717 | 8.1:-1743910 | MS.gene012655:CDS |
TGCAGATTCATATAATTTCC+TGG | 0.375451 | 8.1:+1740474 | None:intergenic |
ATGACTTGCATAAAATTTAA+GGG | 0.380249 | 8.1:+1740849 | None:intergenic |
AGTGCAGTTATGGGAATTAA+GGG | 0.388281 | 8.1:-1742841 | MS.gene012655:CDS |
TCAGGTGCAAAAGGCAATTC+AGG | 0.402595 | 8.1:-1743409 | MS.gene012655:intron |
ATGTATGGCCCATCTATATT+GGG | 0.405195 | 8.1:+1743020 | None:intergenic |
TTCAACCGAACCAGAATTCT+GGG | 0.405346 | 8.1:-1743499 | MS.gene012655:CDS |
AGGTTGCACCCAAAGGTTCC+AGG | 0.405391 | 8.1:-1744023 | MS.gene012655:CDS |
TTTCTAAGATTGAGACTTGA+AGG | 0.405456 | 8.1:+1743609 | None:intergenic |
AACAAGCTACCGCTGTCTAT+TGG | 0.405697 | 8.1:-1740256 | MS.gene012655:CDS |
CTTGCTTTGAAGCGCTATAA+GGG | 0.406823 | 8.1:-1745003 | MS.gene012655:CDS |
ACATTTGCAGTTGAGACAAT+TGG | 0.409596 | 8.1:-1742916 | MS.gene012655:CDS |
ACCTTTGGGTGGAGTATCTT+CGG | 0.410834 | 8.1:-1743896 | MS.gene012655:CDS |
ATTGGATGAGGCCAGGAAAC+TGG | 0.417782 | 8.1:-1742898 | MS.gene012655:CDS |
TATGTATGGCCCATCTATAT+TGG | 0.420247 | 8.1:+1743019 | None:intergenic |
GGTTGCCTTGGGTGAGGATG+AGG | 0.428184 | 8.1:-1743835 | MS.gene012655:CDS |
TTGCAGAATCAGTGCAGTTA+TGG | 0.428214 | 8.1:-1742851 | MS.gene012655:CDS |
TCCAAACTCCTGGAACCTTT+GGG | 0.430227 | 8.1:+1744015 | None:intergenic |
CAGCCCTTTCATATATTGAC+AGG | 0.434375 | 8.1:+1742988 | None:intergenic |
GATGAGGCCGTGTCCGTTGA+AGG | 0.435930 | 8.1:-1745187 | MS.gene012655:CDS |
TTTAATTCCTCAGGTGCAAA+AGG | 0.436231 | 8.1:-1743418 | MS.gene012655:CDS |
TGCAGAATCAGTGCAGTTAT+GGG | 0.443270 | 8.1:-1742850 | MS.gene012655:CDS |
AAATCCAAATCTGATTTCGC+TGG | 0.444340 | 8.1:-1745054 | MS.gene012655:CDS |
GGATAACAAATCAGTATCAC+TGG | 0.447213 | 8.1:+1742776 | None:intergenic |
CCCAAAGGTCTTCTGATGTT+GGG | 0.447510 | 8.1:+1743910 | None:intergenic |
GCTTTGAAAAGTGTGCCTTC+AGG | 0.457241 | 8.1:-1743104 | MS.gene012655:CDS |
ACCCAAAGGTCTTCTGATGT+TGG | 0.461135 | 8.1:+1743909 | None:intergenic |
GAAGCAAACCTTGCATCAAT+AGG | 0.462444 | 8.1:-1740520 | MS.gene012655:CDS |
TTTGGATATATGCTGCAGCC+TGG | 0.462693 | 8.1:-1743998 | MS.gene012655:CDS |
TTTGTCTAAGGAGTTCGAAA+AGG | 0.466162 | 8.1:+1742754 | None:intergenic |
TTGTCTCAACTGCAAATGTA+AGG | 0.468804 | 8.1:+1742920 | None:intergenic |
ATCAGAGAACTTGTGGCTAA+AGG | 0.473103 | 8.1:-1742706 | MS.gene012655:intron |
ATAAGGGTGATATTCAACTT+TGG | 0.475919 | 8.1:-1744987 | MS.gene012655:CDS |
AAAGATGGTGGTAGTGAAAG+TGG | 0.479068 | 8.1:-1740778 | MS.gene012655:CDS |
GGCTGCCCGTGCTTTAATGC+AGG | 0.480714 | 8.1:-1743949 | MS.gene012655:CDS |
CTTCCTATATAATGCAAGGC+CGG | 0.481302 | 8.1:+1740555 | None:intergenic |
GAAGGCCAGGAAGGTTGCCT+TGG | 0.484452 | 8.1:-1743847 | MS.gene012655:CDS |
CACATACATTAACAAGTTGA+AGG | 0.486769 | 8.1:-1743865 | MS.gene012655:CDS |
CAAATCTGATTTCGCTGGGT+TGG | 0.489760 | 8.1:-1745049 | MS.gene012655:CDS |
CCAGTCCCAGAATTCTGGTT+CGG | 0.497439 | 8.1:+1743494 | None:intergenic |
ATCTCCTGTCAATATATGAA+AGG | 0.498463 | 8.1:-1742992 | MS.gene012655:CDS |
TTGTCTAAGGAGTTCGAAAA+GGG | 0.499749 | 8.1:+1742755 | None:intergenic |
AAGGCCAGGAAGGTTGCCTT+GGG | 0.501875 | 8.1:-1743846 | MS.gene012655:CDS |
TAGACGATACTTTGATAAGC+TGG | 0.506350 | 8.1:-1740827 | MS.gene012655:CDS |
CCGCTGTCTATTGGCGTGCT+AGG | 0.515561 | 8.1:-1740247 | MS.gene012655:CDS |
TTTCAAAATCAGAGAACTTG+TGG | 0.516848 | 8.1:-1742713 | MS.gene012655:CDS |
TGAGACAATTGGATGAGGCC+AGG | 0.517854 | 8.1:-1742905 | MS.gene012655:CDS |
TTCCTATATAATGCAAGGCC+GGG | 0.518118 | 8.1:+1740556 | None:intergenic |
GACAGGAGATGTGGTATGTA+TGG | 0.519034 | 8.1:+1743005 | None:intergenic |
AAAATAGTCTCGCAAATGCC+AGG | 0.523648 | 8.1:-1740492 | MS.gene012655:CDS |
AAAGAATTATTTGCTGAGCA+TGG | 0.524154 | 8.1:-1743678 | MS.gene012655:CDS |
ATCCCGGCCTTGCATTATAT+AGG | 0.525127 | 8.1:-1740558 | MS.gene012655:CDS |
AATCCAAATCTGATTTCGCT+GGG | 0.526420 | 8.1:-1745053 | MS.gene012655:CDS |
TCTCCTGTCAATATATGAAA+GGG | 0.526427 | 8.1:-1742991 | MS.gene012655:CDS |
ATATGAAAGGGCTGAAAGCA+TGG | 0.527334 | 8.1:-1742979 | MS.gene012655:CDS |
TGGGGAAGCAATAAATTCAC+TGG | 0.533228 | 8.1:+1740208 | None:intergenic |
CTTTCTTTGGCTAAAGATGG+TGG | 0.535513 | 8.1:-1740790 | MS.gene012655:CDS |
ATTGGGTTCTTCATCTTTAG+GGG | 0.537286 | 8.1:+1743037 | None:intergenic |
TTCTAAGATTGAGACTTGAA+GGG | 0.538562 | 8.1:+1743610 | None:intergenic |
TTGGATATATGCTGCAGCCT+GGG | 0.539070 | 8.1:-1743997 | MS.gene012655:CDS |
GCGCGTGAGTTGAAGAAACT+AGG | 0.539826 | 8.1:-1745093 | MS.gene012655:CDS |
GCAGCATATATCCAAACTCC+TGG | 0.541975 | 8.1:+1744005 | None:intergenic |
CAGGAAGGTTGCCTTGGGTG+AGG | 0.542496 | 8.1:-1743841 | MS.gene012655:CDS |
GTATTGCACTATGTCAGCCA+TGG | 0.543507 | 8.1:+1745320 | None:intergenic |
CTACTATCGCATGGAGGTCA+AGG | 0.543652 | 8.1:-1740413 | MS.gene012655:intron |
ACCTCCCTGCATTAAAGCAC+GGG | 0.548301 | 8.1:+1743944 | None:intergenic |
TCGATGCACTACGTAGGTTA+CGG | 0.551001 | 8.1:-1745128 | MS.gene012655:CDS |
GCAGTTGAGACAATTGGATG+AGG | 0.554938 | 8.1:-1742910 | MS.gene012655:CDS |
CGCGTGAGTTGAAGAAACTA+GGG | 0.556936 | 8.1:-1745092 | MS.gene012655:CDS |
AGAGGCGGAAATTCGAGTAC+AGG | 0.557613 | 8.1:-1745212 | MS.gene012655:CDS |
GACCTCCCTGCATTAAAGCA+CGG | 0.559052 | 8.1:+1743943 | None:intergenic |
ATATAGGAAGTGCATTGAGC+TGG | 0.561780 | 8.1:-1740542 | MS.gene012655:CDS |
TATCTAGCTTTACCGCATCC+CGG | 0.562125 | 8.1:-1740574 | MS.gene012655:CDS |
AGATACTGAACGACATGAAG+AGG | 0.563350 | 8.1:-1743527 | MS.gene012655:CDS |
ACATTAACAAGTTGAAGGCC+AGG | 0.564813 | 8.1:-1743860 | MS.gene012655:CDS |
ATGAAGAACCCAATATAGAT+GGG | 0.565040 | 8.1:-1743028 | MS.gene012655:CDS |
TATGAAAGGGCTGAAAGCAT+GGG | 0.567635 | 8.1:-1742978 | MS.gene012655:CDS |
AAGATTGAGACTTGAAGGGA+TGG | 0.570301 | 8.1:+1743614 | None:intergenic |
TCTTGTTAGGTTGCACCCAA+AGG | 0.570444 | 8.1:-1744030 | MS.gene012655:CDS |
TGATCGTAACTTGAATGTTG+TGG | 0.571370 | 8.1:-1743970 | MS.gene012655:CDS |
GACTCGTAATCCTAGAACTG+TGG | 0.572997 | 8.1:-1743805 | MS.gene012655:CDS |
TTGAAGTATAAAACTAACAA+TGG | 0.574024 | 8.1:+1740738 | None:intergenic |
TCATATATTGACAGGAGATG+TGG | 0.577193 | 8.1:+1742996 | None:intergenic |
AAATCCTCCTTCAACGGACA+CGG | 0.582690 | 8.1:+1745180 | None:intergenic |
CCGAACCAGAATTCTGGGAC+TGG | 0.583962 | 8.1:-1743494 | MS.gene012655:CDS |
TCTGTTGCAGGTTTATGAAG+AGG | 0.585714 | 8.1:-1743126 | MS.gene012655:intron |
TATAATGCAAGGCCGGGATG+CGG | 0.586266 | 8.1:+1740562 | None:intergenic |
TGCACTTCCTATATAATGCA+AGG | 0.587184 | 8.1:+1740551 | None:intergenic |
TAACAAGTTGAAGGCCAGGA+AGG | 0.590491 | 8.1:-1743856 | MS.gene012655:CDS |
TTGGGTGGAGTATCTTCGGA+TGG | 0.594540 | 8.1:-1743892 | MS.gene012655:CDS |
AATTCGAGTACAGGCTGATG+AGG | 0.600197 | 8.1:-1745203 | MS.gene012655:CDS |
GCTACAAAATCCTCCTTCAA+CGG | 0.606386 | 8.1:+1745174 | None:intergenic |
TTGGCAAGACTACTATCGCA+TGG | 0.606759 | 8.1:-1740422 | MS.gene012655:CDS |
AAACTAAACATAGTTCCTGA+AGG | 0.616969 | 8.1:+1743089 | None:intergenic |
GTTGCCTTGGGTGAGGATGA+GGG | 0.618019 | 8.1:-1743834 | MS.gene012655:CDS |
CAAGTTACGATCAAACTCCC+AGG | 0.624320 | 8.1:+1743980 | None:intergenic |
GATACTGAACGACATGAAGA+GGG | 0.627347 | 8.1:-1743526 | MS.gene012655:CDS |
GCTGCCCGTGCTTTAATGCA+GGG | 0.630198 | 8.1:-1743948 | MS.gene012655:CDS |
ACGATACTTTGATAAGCTGG+TGG | 0.633401 | 8.1:-1740824 | MS.gene012655:CDS |
AGTTCCCTCATCCTCACCCA+AGG | 0.637079 | 8.1:+1743830 | None:intergenic |
TGACATAGTGCAATACAAGC+TGG | 0.643441 | 8.1:-1745313 | MS.gene012655:CDS |
CTGGTAGCAAAGCTTTGCAG+CGG | 0.649670 | 8.1:-1742879 | MS.gene012655:CDS |
TCCGAAGATACTCCACCCAA+AGG | 0.653095 | 8.1:+1743895 | None:intergenic |
GATAACAAATCAGTATCACT+GGG | 0.657544 | 8.1:+1742777 | None:intergenic |
AACATCAGAAGACCTTTGGG+TGG | 0.663723 | 8.1:-1743907 | MS.gene012655:CDS |
GCCCGTGCTTTAATGCAGGG+AGG | 0.670197 | 8.1:-1743945 | MS.gene012655:CDS |
ACGAGATTGTTAAACAGAGG+CGG | 0.673954 | 8.1:-1745227 | MS.gene012655:CDS |
GAGGCCGTGTCCGTTGAAGG+AGG | 0.675188 | 8.1:-1745184 | MS.gene012655:CDS |
TTCGAAGATCTCGAGCAACG+TGG | 0.678884 | 8.1:-1745273 | MS.gene012655:CDS |
TCAAAAGGATGGAATTCACA+AGG | 0.680373 | 8.1:-1740719 | MS.gene012655:CDS |
TCGACGAGATTGTTAAACAG+AGG | 0.689269 | 8.1:-1745230 | MS.gene012655:CDS |
ACGTAGGTTACGGAAGAAGT+CGG | 0.692227 | 8.1:-1745118 | MS.gene012655:CDS |
CCTAGCACGCCAATAGACAG+CGG | 0.706749 | 8.1:+1740247 | None:intergenic |
ACATTACGAAGATATGTGCG+AGG | 0.714205 | 8.1:-1743550 | MS.gene012655:CDS |
CGCAGCTCGATGCACTACGT+AGG | 0.747048 | 8.1:-1745134 | MS.gene012655:CDS |
TAGGTTACGGAAGAAGTCGG+TGG | 0.753853 | 8.1:-1745115 | MS.gene012655:CDS |
GCAAGACTACTATCGCATGG+AGG | 0.758958 | 8.1:-1740419 | MS.gene012655:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATTAATAACAGAATTTA+GGG | + | chr8.1:1744522-1744541 | None:intergenic | 10.0% |
!!! | TTTTGTTTTTAAATTTTTAC+AGG | - | chr8.1:1741454-1741473 | MS.gene012655:intron | 10.0% |
!! | CATAATTAATAACAGAATTT+AGG | + | chr8.1:1744523-1744542 | None:intergenic | 15.0% |
!! | TAATTAATAACAGAATTTAG+GGG | + | chr8.1:1744521-1744540 | None:intergenic | 15.0% |
!! | TACATATTAGAAATTAAACT+TGG | + | chr8.1:1741369-1741388 | None:intergenic | 15.0% |
!!! | AAAGAGATTTTTTGAAATAT+TGG | - | chr8.1:1741928-1741947 | MS.gene012655:intron | 15.0% |
!!! | AATTAAACCTTTTTTTAAGA+TGG | - | chr8.1:1744326-1744345 | MS.gene012655:intron | 15.0% |
!! | AACACTATACAAAATAATTC+AGG | + | chr8.1:1744594-1744613 | None:intergenic | 20.0% |
!! | AATCAATAGATTTAAACTTG+AGG | - | chr8.1:1741272-1741291 | MS.gene012655:intron | 20.0% |
!! | AATTAATAACAGAATTTAGG+GGG | + | chr8.1:1744520-1744539 | None:intergenic | 20.0% |
!! | ATATGTAAAGCAAATAATTC+AGG | - | chr8.1:1741382-1741401 | MS.gene012655:intron | 20.0% |
!! | ATTTAAATTGTCAACACTAT+AGG | + | chr8.1:1741152-1741171 | None:intergenic | 20.0% |
!! | ATTTGATTGATAAATTATCC+AGG | + | chr8.1:1745183-1745202 | None:intergenic | 20.0% |
!! | CTTTAAATACATACAATTCA+AGG | + | chr8.1:1744459-1744478 | None:intergenic | 20.0% |
!! | TAGGAAAATTCATCATATTA+TGG | - | chr8.1:1742228-1742247 | MS.gene012655:intron | 20.0% |
!! | TCAAAATCCATCTTAAAAAA+AGG | + | chr8.1:1744336-1744355 | None:intergenic | 20.0% |
!! | TTGAAGTATAAAACTAACAA+TGG | + | chr8.1:1744782-1744801 | None:intergenic | 20.0% |
!! | TTTAAATTGTCAACACTATA+GGG | + | chr8.1:1741151-1741170 | None:intergenic | 20.0% |
!!! | AGATTTTTTGAAATATTGGA+GGG | - | chr8.1:1741932-1741951 | MS.gene012655:intron | 20.0% |
!!! | ATAATAAGTTGAAAACAACT+TGG | - | chr8.1:1741072-1741091 | MS.gene012655:intron | 20.0% |
!!! | ATGACTTGCATAAAATTTAA+GGG | + | chr8.1:1744671-1744690 | None:intergenic | 20.0% |
!!! | ATTTGCTATAAAAATTGCTT+AGG | + | chr8.1:1740766-1740785 | None:intergenic | 20.0% |
!!! | ATTTGTTTATTCCTTTTGAT+TGG | + | chr8.1:1742893-1742912 | None:intergenic | 20.0% |
!!! | GCATATATACCTTTTTTTTT+GGG | - | chr8.1:1745211-1745230 | MS.gene012655:CDS | 20.0% |
!!! | GTTGACAATTTAAATTGTTT+TGG | - | chr8.1:1741157-1741176 | MS.gene012655:intron | 20.0% |
!!! | TAAGCAATTTTTATAGCAAA+TGG | - | chr8.1:1740765-1740784 | MS.gene012655:CDS | 20.0% |
!!! | TATGACTTGCATAAAATTTA+AGG | + | chr8.1:1744672-1744691 | None:intergenic | 20.0% |
!!! | TATGGTTTTGTAATTTACTA+TGG | - | chr8.1:1742246-1742265 | MS.gene012655:intron | 20.0% |
!!! | TGATTTTGAAACATGAAATT+TGG | + | chr8.1:1742795-1742814 | None:intergenic | 20.0% |
!!! | TGCATATATACCTTTTTTTT+TGG | - | chr8.1:1745210-1745229 | MS.gene012655:CDS | 20.0% |
!!! | TGTTAGTTTTATACTTCAAA+AGG | - | chr8.1:1744783-1744802 | MS.gene012655:intron | 20.0% |
!!! | TTGTATGCAAATTTTCTAAT+GGG | - | chr8.1:1742449-1742468 | MS.gene012655:intron | 20.0% |
!!! | TTTAGTTTTCAATTACTTGT+TGG | - | chr8.1:1745145-1745164 | MS.gene012655:CDS | 20.0% |
!!! | TTTGTATGCAAATTTTCTAA+TGG | - | chr8.1:1742448-1742467 | MS.gene012655:intron | 20.0% |
!!! | TTTTGTAGGGTTAAAAAAAA+TGG | - | chr8.1:1740568-1740587 | MS.gene012655:CDS | 20.0% |
!!! | TTTTTTTTAAATAACCACTC+TGG | - | chr8.1:1744148-1744167 | MS.gene012655:intron | 20.0% |
! | AAAATCACAATTGAGAAACT+AGG | + | chr8.1:1743158-1743177 | None:intergenic | 25.0% |
! | AAATCACAATTGAGAAACTA+GGG | + | chr8.1:1743157-1743176 | None:intergenic | 25.0% |
! | AAATGAAACATGTTCAACAT+TGG | - | chr8.1:1743360-1743379 | MS.gene012655:intron | 25.0% |
! | AACAAAAAAACGTTCAACAA+TGG | + | chr8.1:1744066-1744085 | None:intergenic | 25.0% |
! | AATCAAAAAGAGATCAAATG+TGG | - | chr8.1:1744247-1744266 | MS.gene012655:intron | 25.0% |
! | AATTCAGGCACTAAAATATT+TGG | - | chr8.1:1741397-1741416 | MS.gene012655:intron | 25.0% |
! | ACTAATAATAGATCTGTGAT+GGG | - | chr8.1:1742966-1742985 | MS.gene012655:CDS | 25.0% |
! | AGATCAAAACCCAAAAAAAA+AGG | + | chr8.1:1745223-1745242 | None:intergenic | 25.0% |
! | ATAAGTTAAAATCTGAGTGT+TGG | + | chr8.1:1743196-1743215 | None:intergenic | 25.0% |
! | ATACAAAATAATTCAGGTGA+AGG | + | chr8.1:1744588-1744607 | None:intergenic | 25.0% |
! | ATATTGATCCAACAAATCAT+TGG | - | chr8.1:1742355-1742374 | MS.gene012655:intron | 25.0% |
! | ATCAAAAAGAGATCAAATGT+GGG | - | chr8.1:1744248-1744267 | MS.gene012655:intron | 25.0% |
! | ATGATAAGTGTTTATGCTAT+AGG | + | chr8.1:1740979-1740998 | None:intergenic | 25.0% |
! | ATTCAGGCACTAAAATATTT+GGG | - | chr8.1:1741398-1741417 | MS.gene012655:intron | 25.0% |
! | ATTTGGTCAAAATTTGTCTA+AGG | + | chr8.1:1742778-1742797 | None:intergenic | 25.0% |
! | CAACAAAAATAAGAGATAAG+TGG | + | chr8.1:1742847-1742866 | None:intergenic | 25.0% |
! | CTGAAATATATCTATCAATG+AGG | - | chr8.1:1743517-1743536 | MS.gene012655:CDS | 25.0% |
! | CTTATTATTATAAGCTCTCT+AGG | + | chr8.1:1741060-1741079 | None:intergenic | 25.0% |
! | TAGTGGTAAATATTAACTTC+AGG | - | chr8.1:1743832-1743851 | MS.gene012655:CDS | 25.0% |
! | TATTGATCCAACAAATCATT+GGG | - | chr8.1:1742356-1742375 | MS.gene012655:intron | 25.0% |
! | TTAGAGAGATGAACAAATTT+AGG | + | chr8.1:1744631-1744650 | None:intergenic | 25.0% |
!! | AATACATTTAGTCTTCAACT+GGG | + | chr8.1:1743098-1743117 | None:intergenic | 25.0% |
!! | ATACCTTTTATAGATATCTC+TGG | + | chr8.1:1744824-1744843 | None:intergenic | 25.0% |
!! | CTTTTCCTTTATGTGTTTTA+TGG | - | chr8.1:1742172-1742191 | MS.gene012655:intron | 25.0% |
!! | TAGTTTCTCAATTGTGATTT+TGG | - | chr8.1:1743157-1743176 | MS.gene012655:intron | 25.0% |
!!! | AGTTTTATACTTCAAAAGGA+TGG | - | chr8.1:1744787-1744806 | MS.gene012655:intron | 25.0% |
!!! | ATGATTTGTTGGATCAATAT+AGG | + | chr8.1:1742355-1742374 | None:intergenic | 25.0% |
!!! | GACAATTTAAATTGTTTTGG+TGG | - | chr8.1:1741160-1741179 | MS.gene012655:intron | 25.0% |
!!! | GAGATTTTTTGAAATATTGG+AGG | - | chr8.1:1741931-1741950 | MS.gene012655:intron | 25.0% |
!!! | GTTGAACATGTTTCATTTTT+TGG | + | chr8.1:1743358-1743377 | None:intergenic | 25.0% |
AAAAAATGGCAGAATGAAGA+AGG | - | chr8.1:1740582-1740601 | MS.gene012655:intron | 30.0% | |
AAACTAAACATAGTTCCTGA+AGG | + | chr8.1:1742431-1742450 | None:intergenic | 30.0% | |
AATCACAATTGAGAAACTAG+GGG | + | chr8.1:1743156-1743175 | None:intergenic | 30.0% | |
ACCATCCTAATACTTAAACA+CGG | + | chr8.1:1742285-1742304 | None:intergenic | 30.0% | |
ATAAGGGTGATATTCAACTT+TGG | - | chr8.1:1740530-1740549 | MS.gene012655:CDS | 30.0% | |
ATACTTAAACACGGGAAAAA+TGG | + | chr8.1:1742276-1742295 | None:intergenic | 30.0% | |
ATATTGGGTTCTTCATCTTT+AGG | + | chr8.1:1742485-1742504 | None:intergenic | 30.0% | |
ATCTCCTGTCAATATATGAA+AGG | - | chr8.1:1742525-1742544 | MS.gene012655:intron | 30.0% | |
ATGAAGAACCCAATATAGAT+GGG | - | chr8.1:1742489-1742508 | MS.gene012655:intron | 30.0% | |
CAGAGAAATATATAGATGAG+GGG | - | chr8.1:1743553-1743572 | MS.gene012655:CDS | 30.0% | |
CATAGGTAAAAAAGTAAGTC+AGG | + | chr8.1:1743060-1743079 | None:intergenic | 30.0% | |
CCAGAGAAATATATAGATGA+GGG | - | chr8.1:1743552-1743571 | MS.gene012655:CDS | 30.0% | |
CCAGAGAAATATATAGATGA+GGG | + | chr8.1:1743571-1743552 | None:intergenic | 30.0% | |
CCTGAGGAATTAAAATTTCT+TGG | + | chr8.1:1742093-1742112 | None:intergenic | 30.0% | |
CTATGGTAGAATATGATTGT+AGG | - | chr8.1:1741185-1741204 | MS.gene012655:intron | 30.0% | |
CTCAAAAATCCAATGATCAA+GGG | + | chr8.1:1743017-1743036 | None:intergenic | 30.0% | |
GAATGCTTTAACATGAAACT+AGG | - | chr8.1:1742209-1742228 | MS.gene012655:intron | 30.0% | |
GACTAATAATAGATCTGTGA+TGG | - | chr8.1:1742965-1742984 | MS.gene012655:CDS | 30.0% | |
GAGTGGTAAATATTAACTTC+AGG | + | chr8.1:1743591-1743610 | None:intergenic | 30.0% | |
GATAACAAATCAGTATCACT+GGG | + | chr8.1:1742743-1742762 | None:intergenic | 30.0% | |
GCAGGTTATAGATTATTGAA+AGG | - | chr8.1:1741340-1741359 | MS.gene012655:intron | 30.0% | |
GGTTATAGATTATTGAAAGG+TGG | - | chr8.1:1741343-1741362 | MS.gene012655:intron | 30.0% | |
GTAAGTCAGGTAATTCTATA+CGG | + | chr8.1:1743047-1743066 | None:intergenic | 30.0% | |
TAAAATGTGCTCCAATCAAA+AGG | - | chr8.1:1742879-1742898 | MS.gene012655:CDS | 30.0% | |
TAAGTCAGGTAATTCTATAC+GGG | + | chr8.1:1743046-1743065 | None:intergenic | 30.0% | |
TACTTAAACACGGGAAAAAT+GGG | + | chr8.1:1742275-1742294 | None:intergenic | 30.0% | |
TATTAGGATGGTTAGATAGA+GGG | - | chr8.1:1742293-1742312 | MS.gene012655:intron | 30.0% | |
TATTGGGTTCTTCATCTTTA+GGG | + | chr8.1:1742484-1742503 | None:intergenic | 30.0% | |
TCAAAAAGAGATCAAATGTG+GGG | - | chr8.1:1744249-1744268 | MS.gene012655:intron | 30.0% | |
TCCAGAGAAATATATAGATG+AGG | - | chr8.1:1743551-1743570 | MS.gene012655:CDS | 30.0% | |
TCCAGAGAAATATATAGATG+AGG | + | chr8.1:1743570-1743551 | None:intergenic | 30.0% | |
TCTCCTGTCAATATATGAAA+GGG | - | chr8.1:1742526-1742545 | MS.gene012655:intron | 30.0% | |
TGCAGATTCATATAATTTCC+TGG | + | chr8.1:1745046-1745065 | None:intergenic | 30.0% | |
TGGTAAATATTAACTTCAGG+AGG | - | chr8.1:1743835-1743854 | MS.gene012655:CDS | 30.0% | |
TGGTAAATATTAACTTCAGG+AGG | + | chr8.1:1743854-1743835 | None:intergenic | 30.0% | |
TTATTTGTAGCTTATAGCAC+AGG | - | chr8.1:1740706-1740725 | MS.gene012655:CDS | 30.0% | |
TTCAATAATCTATAACCTGC+TGG | + | chr8.1:1741340-1741359 | None:intergenic | 30.0% | |
TTGTTCTTCTTTGATTCATC+TGG | + | chr8.1:1741821-1741840 | None:intergenic | 30.0% | |
TTTCAAAATCAGAGAACTTG+TGG | - | chr8.1:1742804-1742823 | MS.gene012655:CDS | 30.0% | |
! | AAAGAATTATTTGCTGAGCA+TGG | - | chr8.1:1741839-1741858 | MS.gene012655:intron | 30.0% |
! | AGCACATTTTATACAAGACA+TGG | + | chr8.1:1742870-1742889 | None:intergenic | 30.0% |
! | ATTTTCCATAGTATGCTGTA+TGG | - | chr8.1:1744870-1744889 | MS.gene012655:intron | 30.0% |
! | CAATACATTTAGTCTTCAAC+TGG | + | chr8.1:1743099-1743118 | None:intergenic | 30.0% |
! | CACATACATTAACAAGTTGA+AGG | - | chr8.1:1741652-1741671 | MS.gene012655:intron | 30.0% |
! | TTCCTTTATGTGTTTTATGG+TGG | - | chr8.1:1742175-1742194 | MS.gene012655:intron | 30.0% |
! | TTTTATCTCCTATTGATGCA+AGG | + | chr8.1:1745008-1745027 | None:intergenic | 30.0% |
! | TTTTCCATAGTATGCTGTAT+GGG | - | chr8.1:1744871-1744890 | MS.gene012655:intron | 30.0% |
! | TTTTCCCGTGTTTAAGTATT+AGG | - | chr8.1:1742277-1742296 | MS.gene012655:intron | 30.0% |
!! | ATAAGTTTTGTGAGACTGTT+TGG | + | chr8.1:1740919-1740938 | None:intergenic | 30.0% |
!! | GTTTTCCTCTTTTTCATCAA+GGG | + | chr8.1:1741780-1741799 | None:intergenic | 30.0% |
!! | TAAGTTTTGTGAGACTGTTT+GGG | + | chr8.1:1740918-1740937 | None:intergenic | 30.0% |
!! | TCGTTATCTTGAGTTTTGTA+GGG | - | chr8.1:1740555-1740574 | MS.gene012655:CDS | 30.0% |
!! | TTCGTTATCTTGAGTTTTGT+AGG | - | chr8.1:1740554-1740573 | MS.gene012655:CDS | 30.0% |
!! | TTCTAAGATTGAGACTTGAA+GGG | + | chr8.1:1741910-1741929 | None:intergenic | 30.0% |
!! | TTTCTAAGATTGAGACTTGA+AGG | + | chr8.1:1741911-1741930 | None:intergenic | 30.0% |
!!! | AAATTGTTTTGGTGGTACTA+TGG | - | chr8.1:1741168-1741187 | MS.gene012655:intron | 30.0% |
!!! | ATGACCAAAATGTTGACTTT+TGG | - | chr8.1:1745076-1745095 | MS.gene012655:CDS | 30.0% |
!!! | ATTTTTTAAAATGCCCACTC+TGG | + | chr8.1:1743264-1743283 | None:intergenic | 30.0% |
!!! | CCAAGAAATTTTAATTCCTC+AGG | - | chr8.1:1742090-1742109 | MS.gene012655:intron | 30.0% |
!!! | CTGACTTACTTTTTTACCTA+TGG | - | chr8.1:1743058-1743077 | MS.gene012655:CDS | 30.0% |
!!! | TTTTTTAAAATGCCCACTCT+GGG | + | chr8.1:1743263-1743282 | None:intergenic | 30.0% |
AAAAAGAGATCAAATGTGGG+GGG | - | chr8.1:1744251-1744270 | MS.gene012655:intron | 35.0% | |
AAATCCAAATCTGATTTCGC+TGG | - | chr8.1:1740463-1740482 | MS.gene012655:CDS | 35.0% | |
AAATCCCATACAGCATACTA+TGG | + | chr8.1:1744878-1744897 | None:intergenic | 35.0% | |
AAGGATGTGATGTGAATGAA+AGG | - | chr8.1:1743421-1743440 | MS.gene012655:CDS | 35.0% | |
AAGGATGTGATGTGAATGAA+CGG | + | chr8.1:1743440-1743421 | None:intergenic | 35.0% | |
AATCCAAATCTGATTTCGCT+GGG | - | chr8.1:1740464-1740483 | MS.gene012655:CDS | 35.0% | |
AATCTTGAGCTGGTTATCAA+AGG | + | chr8.1:1743394-1743413 | None:intergenic | 35.0% | |
ACAATGCAAGCTCTTTCTAA+TGG | - | chr8.1:1743927-1743946 | MS.gene012655:CDS | 35.0% | |
ACATTTGCAGTTGAGACAAT+TGG | - | chr8.1:1742601-1742620 | MS.gene012655:intron | 35.0% | |
ACTATAGGGTCTCTTTGAAT+TGG | + | chr8.1:1741137-1741156 | None:intergenic | 35.0% | |
AGCCACCATAAAACACATAA+AGG | + | chr8.1:1742180-1742199 | None:intergenic | 35.0% | |
AGGCCAGAGATATCTATAAA+AGG | - | chr8.1:1744818-1744837 | MS.gene012655:intron | 35.0% | |
AGTGCAGTTATGGGAATTAA+GGG | - | chr8.1:1742676-1742695 | MS.gene012655:intron | 35.0% | |
ATATTAACTTCAGGAGGAGT+AGG | - | chr8.1:1743841-1743860 | MS.gene012655:CDS | 35.0% | |
ATATTAACTTCAGGAGGAGT+AGG | + | chr8.1:1743860-1743841 | None:intergenic | 35.0% | |
ATCACAATTGAGAAACTAGG+GGG | + | chr8.1:1743155-1743174 | None:intergenic | 35.0% | |
ATGTATGGCCCATCTATATT+GGG | + | chr8.1:1742500-1742519 | None:intergenic | 35.0% | |
ATTGGGTTCTTCATCTTTAG+GGG | + | chr8.1:1742483-1742502 | None:intergenic | 35.0% | |
CAAAAAGAGATCAAATGTGG+GGG | - | chr8.1:1744250-1744269 | MS.gene012655:intron | 35.0% | |
CAATATAGGCGCAAGAAAAA+AGG | + | chr8.1:1742341-1742360 | None:intergenic | 35.0% | |
CAATTCAGGTACGAATATGT+AGG | - | chr8.1:1742122-1742141 | MS.gene012655:intron | 35.0% | |
CCATCCTAATACTTAAACAC+GGG | + | chr8.1:1742284-1742303 | None:intergenic | 35.0% | |
CCCTCATCTATATATTTCTC+TGG | - | chr8.1:1743868-1743887 | MS.gene012655:CDS | 35.0% | |
CCCTCATCTATATATTTCTC+TGG | + | chr8.1:1743887-1743868 | None:intergenic | 35.0% | |
CTCTAACTGTAACTCAATAC+AGG | - | chr8.1:1744645-1744664 | MS.gene012655:intron | 35.0% | |
GAACTGTGGAAGAAAAACAA+TGG | - | chr8.1:1741726-1741745 | MS.gene012655:intron | 35.0% | |
GATGAAGAACCCAATATAGA+TGG | - | chr8.1:1742488-1742507 | MS.gene012655:intron | 35.0% | |
GCAGAAAACAAATCACAAGA+GGG | + | chr8.1:1743319-1743338 | None:intergenic | 35.0% | |
GCTAAAGATTCAGAAGTTGA+AGG | + | chr8.1:1744024-1744043 | None:intergenic | 35.0% | |
GCTCAAAAATCCAATGATCA+AGG | + | chr8.1:1743018-1743037 | None:intergenic | 35.0% | |
GCTGTTATCATAAGCTATCT+TGG | - | chr8.1:1740829-1740848 | MS.gene012655:CDS | 35.0% | |
GGAGATTTCTGTTCTTTCTT+TGG | - | chr8.1:1744714-1744733 | MS.gene012655:intron | 35.0% | |
GGATAACAAATCAGTATCAC+TGG | + | chr8.1:1742744-1742763 | None:intergenic | 35.0% | |
GGTGAAGGAAAACTAAATTC+AGG | + | chr8.1:1744573-1744592 | None:intergenic | 35.0% | |
GTATTAGGATGGTTAGATAG+AGG | - | chr8.1:1742292-1742311 | MS.gene012655:intron | 35.0% | |
GTTCTTTCTTTGGCTAAAGA+TGG | - | chr8.1:1744724-1744743 | MS.gene012655:intron | 35.0% | |
TAGACGATACTTTGATAAGC+TGG | - | chr8.1:1744690-1744709 | MS.gene012655:intron | 35.0% | |
TAGGATCTACTGAACTCATT+GGG | - | chr8.1:1742141-1742160 | MS.gene012655:intron | 35.0% | |
TATGACCCTTGATGAAAAAG+AGG | - | chr8.1:1741772-1741791 | MS.gene012655:intron | 35.0% | |
TATGTATGGCCCATCTATAT+TGG | + | chr8.1:1742501-1742520 | None:intergenic | 35.0% | |
TCAAAAGGATGGAATTCACA+AGG | - | chr8.1:1744798-1744817 | MS.gene012655:intron | 35.0% | |
TCAAATAAGCAGATCCAAAC+AGG | - | chr8.1:1740953-1740972 | MS.gene012655:intron | 35.0% | |
TCAACTTCTGAATCTTTAGC+TGG | - | chr8.1:1744024-1744043 | MS.gene012655:CDS | 35.0% | |
TCATATATTGACAGGAGATG+TGG | + | chr8.1:1742524-1742543 | None:intergenic | 35.0% | |
TCATATCTTGCATTTGCAAG+AGG | + | chr8.1:1742947-1742966 | None:intergenic | 35.0% | |
TCTAGGAAAGCCTATGAAAA+CGG | + | chr8.1:1741043-1741062 | None:intergenic | 35.0% | |
TCTGCAATGTAACATAGTTG+AGG | + | chr8.1:1744923-1744942 | None:intergenic | 35.0% | |
TGATCGTAACTTGAATGTTG+TGG | - | chr8.1:1741547-1741566 | MS.gene012655:intron | 35.0% | |
TGCACTTCCTATATAATGCA+AGG | + | chr8.1:1744969-1744988 | None:intergenic | 35.0% | |
TGCAGAAAACAAATCACAAG+AGG | + | chr8.1:1743320-1743339 | None:intergenic | 35.0% | |
TGTGAATGAAAGGTTAACGA+AGG | - | chr8.1:1743431-1743450 | MS.gene012655:CDS | 35.0% | |
TGTTATAGCTGCATTTGAAG+TGG | + | chr8.1:1743769-1743788 | None:intergenic | 35.0% | |
TGTTTGAGAACAACACATAG+TGG | - | chr8.1:1743815-1743834 | MS.gene012655:CDS | 35.0% | |
TTCAACAATGGAAGAGTCTT+GGG | + | chr8.1:1744054-1744073 | None:intergenic | 35.0% | |
TTGTCTAAGGAGTTCGAAAA+GGG | + | chr8.1:1742765-1742784 | None:intergenic | 35.0% | |
TTGTCTATCAATGAGGTTGA+TGG | - | chr8.1:1743477-1743496 | MS.gene012655:CDS | 35.0% | |
TTGTCTCAACTGCAAATGTA+AGG | + | chr8.1:1742600-1742619 | None:intergenic | 35.0% | |
TTGTGAAGGCTTAACTATTG+CGG | + | chr8.1:1741309-1741328 | None:intergenic | 35.0% | |
TTTAATTCCTCAGGTGCAAA+AGG | - | chr8.1:1742099-1742118 | MS.gene012655:intron | 35.0% | |
TTTGTCTAAGGAGTTCGAAA+AGG | + | chr8.1:1742766-1742785 | None:intergenic | 35.0% | |
! | ACACCAACTTTGGTTTCAAA+TGG | + | chr8.1:1744389-1744408 | None:intergenic | 35.0% |
! | CTTGCCAAAAGTCAACATTT+TGG | + | chr8.1:1745083-1745102 | None:intergenic | 35.0% |
! | GGCACTAAAATATTTGGGTT+TGG | - | chr8.1:1741403-1741422 | MS.gene012655:intron | 35.0% |
! | GTCTTTTATCCCTTGATCAT+TGG | - | chr8.1:1743005-1743024 | MS.gene012655:CDS | 35.0% |
! | TAGCTTCAATTGAGCGATTT+TGG | + | chr8.1:1744277-1744296 | None:intergenic | 35.0% |
! | TCTATAAAAGGTATGAGCAG+TGG | - | chr8.1:1744830-1744849 | MS.gene012655:intron | 35.0% |
! | TGCATTTGAAGTGGTTAACT+CGG | + | chr8.1:1743760-1743779 | None:intergenic | 35.0% |
! | TGTTGGATTTCTTTTGTACC+TGG | - | chr8.1:1745162-1745181 | MS.gene012655:CDS | 35.0% |
! | TGTTTTTCTTCCACAGTTCT+AGG | + | chr8.1:1741725-1741744 | None:intergenic | 35.0% |
! | TTGCCATTTGAAACCAAAGT+TGG | - | chr8.1:1744383-1744402 | MS.gene012655:intron | 35.0% |
!! | AGTTAAAATCTGAGTGTTGG+TGG | + | chr8.1:1743193-1743212 | None:intergenic | 35.0% |
!! | CAAGCTCTTTCTAATGGATT+TGG | - | chr8.1:1743933-1743952 | MS.gene012655:CDS | 35.0% |
!! | CGTTTTCCTCTTTTTCATCA+AGG | + | chr8.1:1741781-1741800 | None:intergenic | 35.0% |
!! | GCAACGTGTTTTGTTCTTAT+TGG | + | chr8.1:1744174-1744193 | None:intergenic | 35.0% |
!!! | AACCTTTTTCGAACTGTCTA+TGG | - | chr8.1:1741866-1741885 | MS.gene012655:intron | 35.0% |
AAAATAGTCTCGCAAATGCC+AGG | - | chr8.1:1745025-1745044 | MS.gene012655:CDS | 40.0% | |
AAGATTGAGACTTGAAGGGA+TGG | + | chr8.1:1741906-1741925 | None:intergenic | 40.0% | |
ACATTACGAAGATATGTGCG+AGG | - | chr8.1:1741967-1741986 | MS.gene012655:intron | 40.0% | |
ACGAGATTGTTAAACAGAGG+CGG | - | chr8.1:1740290-1740309 | MS.gene012655:intron | 40.0% | |
ACGATACTTTGATAAGCTGG+TGG | - | chr8.1:1744693-1744712 | MS.gene012655:intron | 40.0% | |
AGATACTGAACGACATGAAG+AGG | - | chr8.1:1741990-1742009 | MS.gene012655:intron | 40.0% | |
AGGCACTTGCAAATCTTGTT+AGG | - | chr8.1:1741474-1741493 | MS.gene012655:intron | 40.0% | |
ATATGAAAGGGCTGAAAGCA+TGG | - | chr8.1:1742538-1742557 | MS.gene012655:intron | 40.0% | |
ATCAGAGAACTTGTGGCTAA+AGG | - | chr8.1:1742811-1742830 | MS.gene012655:CDS | 40.0% | |
ATCCAGTCAAAATCTGAGTG+TGG | - | chr8.1:1744215-1744234 | MS.gene012655:intron | 40.0% | |
ATCGCTCAATTGAAGCTAGA+AGG | - | chr8.1:1744279-1744298 | MS.gene012655:intron | 40.0% | |
CAATGAGGCTAATAGAAGAG+CGG | + | chr8.1:1743903-1743922 | None:intergenic | 40.0% | |
CACCATAGACAGTTCGAAAA+AGG | + | chr8.1:1741871-1741890 | None:intergenic | 40.0% | |
CAGCCCTTTCATATATTGAC+AGG | + | chr8.1:1742532-1742551 | None:intergenic | 40.0% | |
CAGTGCAGTTATGGGAATTA+AGG | - | chr8.1:1742675-1742694 | MS.gene012655:intron | 40.0% | |
CCCGTGTTTAAGTATTAGGA+TGG | - | chr8.1:1742281-1742300 | MS.gene012655:intron | 40.0% | |
CGAGAAACAAACACCAACTT+TGG | + | chr8.1:1744399-1744418 | None:intergenic | 40.0% | |
CTCTGCATTGTCTATCAATG+AGG | - | chr8.1:1743470-1743489 | MS.gene012655:CDS | 40.0% | |
CTTCAACTTGAATCTTGAGC+TGG | + | chr8.1:1743404-1743423 | None:intergenic | 40.0% | |
CTTCCTATATAATGCAAGGC+CGG | + | chr8.1:1744965-1744984 | None:intergenic | 40.0% | |
CTTTCTTTGGCTAAAGATGG+TGG | - | chr8.1:1744727-1744746 | MS.gene012655:intron | 40.0% | |
GAAGCAAACCTTGCATCAAT+AGG | - | chr8.1:1744997-1745016 | MS.gene012655:CDS | 40.0% | |
GATACTGAACGACATGAAGA+GGG | - | chr8.1:1741991-1742010 | MS.gene012655:intron | 40.0% | |
GCTACAAAATCCTCCTTCAA+CGG | + | chr8.1:1740346-1740365 | None:intergenic | 40.0% | |
GCTTGCATTGTCTATCAATG+AGG | + | chr8.1:1743918-1743937 | None:intergenic | 40.0% | |
GTAGGATCTACTGAACTCAT+TGG | - | chr8.1:1742140-1742159 | MS.gene012655:intron | 40.0% | |
GTTCAACAATGGAAGAGTCT+TGG | + | chr8.1:1744055-1744074 | None:intergenic | 40.0% | |
GTTTATGCTATAGGCCTGTT+TGG | + | chr8.1:1740970-1740989 | None:intergenic | 40.0% | |
TATAGGCGCAAGAAAAAAGG+AGG | + | chr8.1:1742338-1742357 | None:intergenic | 40.0% | |
TCAAGGGATAAAAGACAACC+AGG | + | chr8.1:1743001-1743020 | None:intergenic | 40.0% | |
TCCAACAAATCATTGGGTTC+TGG | - | chr8.1:1742362-1742381 | MS.gene012655:intron | 40.0% | |
TCCAGTCAAAATCTGAGTGT+GGG | - | chr8.1:1744216-1744235 | MS.gene012655:intron | 40.0% | |
TCGACGAGATTGTTAAACAG+AGG | - | chr8.1:1740287-1740306 | MS.gene012655:intron | 40.0% | |
TCGCTCAATTGAAGCTAGAA+GGG | - | chr8.1:1744280-1744299 | MS.gene012655:intron | 40.0% | |
TCTGTTGCAGGTTTATGAAG+AGG | - | chr8.1:1742391-1742410 | MS.gene012655:intron | 40.0% | |
TGACATAGTGCAATACAAGC+TGG | - | chr8.1:1740204-1740223 | MS.gene012655:CDS | 40.0% | |
TGCAGAATCAGTGCAGTTAT+GGG | - | chr8.1:1742667-1742686 | MS.gene012655:intron | 40.0% | |
TGGGGAAGCAATAAATTCAC+TGG | + | chr8.1:1745312-1745331 | None:intergenic | 40.0% | |
TGTGAATGAACGGTTAACGA+AGG | + | chr8.1:1743995-1744014 | None:intergenic | 40.0% | |
TTAACGAAGGCAAAGAAGCA+GGG | + | chr8.1:1743982-1744001 | None:intergenic | 40.0% | |
TTCAACCGAACCAGAATTCT+GGG | - | chr8.1:1742018-1742037 | MS.gene012655:intron | 40.0% | |
TTCACAAAACTCATTCCAGC+AGG | - | chr8.1:1741322-1741341 | MS.gene012655:intron | 40.0% | |
TTCCTATATAATGCAAGGCC+GGG | + | chr8.1:1744964-1744983 | None:intergenic | 40.0% | |
TTGCAGAATCAGTGCAGTTA+TGG | - | chr8.1:1742666-1742685 | MS.gene012655:intron | 40.0% | |
TTGTCTGAGAAAACACAGAG+TGG | + | chr8.1:1743608-1743627 | None:intergenic | 40.0% | |
TTTCAACCGAACCAGAATTC+TGG | - | chr8.1:1742017-1742036 | MS.gene012655:intron | 40.0% | |
TTTGTTCTTATTGGCCAGAG+TGG | + | chr8.1:1744165-1744184 | None:intergenic | 40.0% | |
! | AAAGATGGTGGTAGTGAAAG+TGG | - | chr8.1:1744739-1744758 | MS.gene012655:intron | 40.0% |
! | ACATTAACAAGTTGAAGGCC+AGG | - | chr8.1:1741657-1741676 | MS.gene012655:intron | 40.0% |
! | ATATAGGAAGTGCATTGAGC+TGG | - | chr8.1:1744975-1744994 | MS.gene012655:CDS | 40.0% |
! | GCTTGTGCTATAAGCTGTTT+TGG | - | chr8.1:1740675-1740694 | MS.gene012655:intron | 40.0% |
! | TACATGGTTCTACGGTTTCT+TGG | + | chr8.1:1743675-1743694 | None:intergenic | 40.0% |
! | TATGAAAGGGCTGAAAGCAT+GGG | - | chr8.1:1742539-1742558 | MS.gene012655:intron | 40.0% |
! | TGGAGGTCAAGGTATTCAAT+TGG | - | chr8.1:1745115-1745134 | MS.gene012655:CDS | 40.0% |
!! | AATCTGCAAGCCGTTTTCAT+AGG | - | chr8.1:1741030-1741049 | MS.gene012655:intron | 40.0% |
!! | ACTTGCTTTGAAGCGCTATA+AGG | - | chr8.1:1740513-1740532 | MS.gene012655:CDS | 40.0% |
!! | CAGCTCAAGATTCAAGTTGA+AGG | - | chr8.1:1743402-1743421 | MS.gene012655:intron | 40.0% |
!! | CTTGCTTTGAAGCGCTATAA+GGG | - | chr8.1:1740514-1740533 | MS.gene012655:CDS | 40.0% |
!! | TAAAATCTGAGTGTTGGTGG+TGG | + | chr8.1:1743190-1743209 | None:intergenic | 40.0% |
!! | TCTTCAACTGGGAAAGCATT+CGG | + | chr8.1:1743087-1743106 | None:intergenic | 40.0% |
!! | TGCTGGAATGAGTTTTGTGA+AGG | + | chr8.1:1741323-1741342 | None:intergenic | 40.0% |
!! | TGGGTTTTGATCTTGCAGAT+GGG | - | chr8.1:1745230-1745249 | MS.gene012655:CDS | 40.0% |
!! | TTGGGTTTTGATCTTGCAGA+TGG | - | chr8.1:1745229-1745248 | MS.gene012655:CDS | 40.0% |
!!! | CTTTTTCGAACTGTCTATGG+TGG | - | chr8.1:1741869-1741888 | MS.gene012655:intron | 40.0% |
AAATCCTCCTTCAACGGACA+CGG | + | chr8.1:1740340-1740359 | None:intergenic | 45.0% | |
AACAAGCTACCGCTGTCTAT+TGG | - | chr8.1:1745261-1745280 | MS.gene012655:CDS | 45.0% | |
AACATCAGAAGACCTTTGGG+TGG | - | chr8.1:1741610-1741629 | MS.gene012655:intron | 45.0% | |
AAGCTTTGCTACCAGTTTCC+TGG | + | chr8.1:1742633-1742652 | None:intergenic | 45.0% | |
AATTCGAGTACAGGCTGATG+AGG | - | chr8.1:1740314-1740333 | MS.gene012655:intron | 45.0% | |
ACCCAAAGGTCTTCTGATGT+TGG | + | chr8.1:1741611-1741630 | None:intergenic | 45.0% | |
ACGTAGGTTACGGAAGAAGT+CGG | - | chr8.1:1740399-1740418 | MS.gene012655:intron | 45.0% | |
ATCCAAACTCCTGGAACCTT+TGG | + | chr8.1:1741506-1741525 | None:intergenic | 45.0% | |
ATCCCGGCCTTGCATTATAT+AGG | - | chr8.1:1744959-1744978 | MS.gene012655:CDS | 45.0% | |
CAAAGAATGCAAAGGAACCG+TGG | + | chr8.1:1743734-1743753 | None:intergenic | 45.0% | |
CAAATCTGATTTCGCTGGGT+TGG | - | chr8.1:1740468-1740487 | MS.gene012655:CDS | 45.0% | |
CAACCCAGCGAAATCAGATT+TGG | + | chr8.1:1740470-1740489 | None:intergenic | 45.0% | |
CAAGTTACGATCAAACTCCC+AGG | + | chr8.1:1741540-1741559 | None:intergenic | 45.0% | |
CAGTCAAAATCTGAGTGTGG+GGG | - | chr8.1:1744218-1744237 | MS.gene012655:intron | 45.0% | |
CCAGTCAAAATCTGAGTGTG+GGG | - | chr8.1:1744217-1744236 | MS.gene012655:intron | 45.0% | |
CCCAAAGGTCTTCTGATGTT+GGG | + | chr8.1:1741610-1741629 | None:intergenic | 45.0% | |
CCCAACATCAGAAGACCTTT+GGG | - | chr8.1:1741607-1741626 | MS.gene012655:intron | 45.0% | |
CGCTCAATTGAAGCTAGAAG+GGG | - | chr8.1:1744281-1744300 | MS.gene012655:intron | 45.0% | |
CTCGGCAACAAAGAATGCAA+AGG | + | chr8.1:1743742-1743761 | None:intergenic | 45.0% | |
GACAGGAGATGTGGTATGTA+TGG | + | chr8.1:1742515-1742534 | None:intergenic | 45.0% | |
GACTCGTAATCCTAGAACTG+TGG | - | chr8.1:1741712-1741731 | MS.gene012655:intron | 45.0% | |
GCAGCATATATCCAAACTCC+TGG | + | chr8.1:1741515-1741534 | None:intergenic | 45.0% | |
GCAGTTGAGACAATTGGATG+AGG | - | chr8.1:1742607-1742626 | MS.gene012655:intron | 45.0% | |
GGCCAAAATCGCACAATTGA+GGG | - | chr8.1:1744302-1744321 | MS.gene012655:intron | 45.0% | |
GTAGAACCATGTACGTGTGT+CGG | - | chr8.1:1743682-1743701 | MS.gene012655:CDS | 45.0% | |
GTTAACGAAGGCAAAGAAGC+AGG | + | chr8.1:1743983-1744002 | None:intergenic | 45.0% | |
GTTAACGAAGGCAAGAAGCA+AGG | - | chr8.1:1743443-1743462 | MS.gene012655:CDS | 45.0% | |
TATGAGCAGTGGAATCAGTG+CGG | - | chr8.1:1744841-1744860 | MS.gene012655:intron | 45.0% | |
TCAGGTGCAAAAGGCAATTC+AGG | - | chr8.1:1742108-1742127 | MS.gene012655:intron | 45.0% | |
TCATTCCTATTGCCCAGAGT+GGG | - | chr8.1:1743248-1743267 | MS.gene012655:intron | 45.0% | |
TCCAAACTCCTGGAACCTTT+GGG | + | chr8.1:1741505-1741524 | None:intergenic | 45.0% | |
TCGATGCACTACGTAGGTTA+CGG | - | chr8.1:1740389-1740408 | MS.gene012655:intron | 45.0% | |
TGTTGTAGTTGCGTCTGTTG+TGG | - | chr8.1:1743628-1743647 | MS.gene012655:CDS | 45.0% | |
TTCATTCCTATTGCCCAGAG+TGG | - | chr8.1:1743247-1743266 | MS.gene012655:intron | 45.0% | |
TTGGATATATGCTGCAGCCT+GGG | - | chr8.1:1741520-1741539 | MS.gene012655:intron | 45.0% | |
TTGGCAAGACTACTATCGCA+TGG | - | chr8.1:1745095-1745114 | MS.gene012655:CDS | 45.0% | |
TTTGGATATATGCTGCAGCC+TGG | - | chr8.1:1741519-1741538 | MS.gene012655:intron | 45.0% | |
! | ACCTTTGGGTGGAGTATCTT+CGG | - | chr8.1:1741621-1741640 | MS.gene012655:intron | 45.0% |
! | CGCGTGAGTTGAAGAAACTA+GGG | - | chr8.1:1740425-1740444 | MS.gene012655:CDS | 45.0% |
! | GACACACGTACATGGTTCTA+CGG | + | chr8.1:1743683-1743702 | None:intergenic | 45.0% |
! | GCCAGAACCCAATGATTTGT+TGG | + | chr8.1:1742366-1742385 | None:intergenic | 45.0% |
! | TAACAAGTTGAAGGCCAGGA+AGG | - | chr8.1:1741661-1741680 | MS.gene012655:intron | 45.0% |
! | TCTTGTTAGGTTGCACCCAA+AGG | - | chr8.1:1741487-1741506 | MS.gene012655:intron | 45.0% |
! | TGAATTGCCTTTTGCACCTG+AGG | + | chr8.1:1742109-1742128 | None:intergenic | 45.0% |
! | TGCCCTCAATTGTGCGATTT+TGG | + | chr8.1:1744307-1744326 | None:intergenic | 45.0% |
!! | AGGAGGCACTGTAAAATGCT+TGG | + | chr8.1:1742321-1742340 | None:intergenic | 45.0% |
!! | GCTTTGAAAAGTGTGCCTTC+AGG | - | chr8.1:1742413-1742432 | MS.gene012655:intron | 45.0% |
!! | GGAAAGCATTCGGATACCAT+AGG | + | chr8.1:1743077-1743096 | None:intergenic | 45.0% |
!! | TATCTAGCTTTACCGCATCC+CGG | - | chr8.1:1744943-1744962 | MS.gene012655:CDS | 45.0% |
!! | TGTGATGGGTTTAGAACACC+TGG | - | chr8.1:1742980-1742999 | MS.gene012655:CDS | 45.0% |
!! | TTCTGGCTTTGATCTGTTGC+AGG | - | chr8.1:1742379-1742398 | MS.gene012655:intron | 45.0% |
AAATGCCCACTCTGGGCAAT+AGG | + | chr8.1:1743256-1743275 | None:intergenic | 50.0% | |
ACCCAAAGGTTCCAGGAGTT+TGG | - | chr8.1:1741501-1741520 | MS.gene012655:intron | 50.0% | |
ACCTCCCTGCATTAAAGCAC+GGG | + | chr8.1:1741576-1741595 | None:intergenic | 50.0% | |
AGAGGCGGAAATTCGAGTAC+AGG | - | chr8.1:1740305-1740324 | MS.gene012655:intron | 50.0% | |
ATGAGCAGTGGAATCAGTGC+GGG | - | chr8.1:1744842-1744861 | MS.gene012655:intron | 50.0% | |
ATTGGATGAGGCCAGGAAAC+TGG | - | chr8.1:1742619-1742638 | MS.gene012655:intron | 50.0% | |
CACAACATGAAACACGCGCA+TGG | - | chr8.1:1743706-1743725 | MS.gene012655:CDS | 50.0% | |
CTACTATCGCATGGAGGTCA+AGG | - | chr8.1:1745104-1745123 | MS.gene012655:CDS | 50.0% | |
CTGGTAGCAAAGCTTTGCAG+CGG | - | chr8.1:1742638-1742657 | MS.gene012655:intron | 50.0% | |
GACCTCCCTGCATTAAAGCA+CGG | + | chr8.1:1741577-1741596 | None:intergenic | 50.0% | |
GCAAGACTACTATCGCATGG+AGG | - | chr8.1:1745098-1745117 | MS.gene012655:CDS | 50.0% | |
GCCCAACATCAGAAGACCTT+TGG | - | chr8.1:1741606-1741625 | MS.gene012655:intron | 50.0% | |
GGGCCAAAATCGCACAATTG+AGG | - | chr8.1:1744301-1744320 | MS.gene012655:intron | 50.0% | |
TAGGTTACGGAAGAAGTCGG+TGG | - | chr8.1:1740402-1740421 | MS.gene012655:intron | 50.0% | |
TATAATGCAAGGCCGGGATG+CGG | + | chr8.1:1744958-1744977 | None:intergenic | 50.0% | |
TCCGAAGATACTCCACCCAA+AGG | + | chr8.1:1741625-1741644 | None:intergenic | 50.0% | |
TGAGACAATTGGATGAGGCC+AGG | - | chr8.1:1742612-1742631 | MS.gene012655:intron | 50.0% | |
TTCGAAGATCTCGAGCAACG+TGG | - | chr8.1:1740244-1740263 | MS.gene012655:CDS | 50.0% | |
TTGTGACCGACACACGTACA+TGG | + | chr8.1:1743691-1743710 | None:intergenic | 50.0% | |
! | CCAGTCCCAGAATTCTGGTT+CGG | + | chr8.1:1742026-1742045 | None:intergenic | 50.0% |
! | GCGCGTGAGTTGAAGAAACT+AGG | - | chr8.1:1740424-1740443 | MS.gene012655:CDS | 50.0% |
! | TTGGGTGGAGTATCTTCGGA+TGG | - | chr8.1:1741625-1741644 | MS.gene012655:intron | 50.0% |
!! | AATCTGAGTGTTGGTGGTGG+TGG | + | chr8.1:1743187-1743206 | None:intergenic | 50.0% |
!! | CCCCACACTCAGATTTTGAC+TGG | + | chr8.1:1744220-1744239 | None:intergenic | 50.0% |
!! | CTGATTTCGCTGGGTTGGTT+AGG | - | chr8.1:1740473-1740492 | MS.gene012655:CDS | 50.0% |
AAGGCCAGGAAGGTTGCCTT+GGG | - | chr8.1:1741671-1741690 | MS.gene012655:intron | 55.0% | |
AGGTTGCACCCAAAGGTTCC+AGG | - | chr8.1:1741494-1741513 | MS.gene012655:intron | 55.0% | |
AGTTCCCTCATCCTCACCCA+AGG | + | chr8.1:1741690-1741709 | None:intergenic | 55.0% | |
CCTAGCACGCCAATAGACAG+CGG | + | chr8.1:1745273-1745292 | None:intergenic | 55.0% | |
GAAACACGCGCATGGTTCCA+CGG | - | chr8.1:1743714-1743733 | MS.gene012655:CDS | 55.0% | |
GCAAGCCAGTCCCAGAATTC+TGG | + | chr8.1:1742031-1742050 | None:intergenic | 55.0% | |
GCTGCCCGTGCTTTAATGCA+GGG | - | chr8.1:1741569-1741588 | MS.gene012655:intron | 55.0% | |
GTTGCCTTGGGTGAGGATGA+GGG | - | chr8.1:1741683-1741702 | MS.gene012655:intron | 55.0% | |
TGAGCAGTGGAATCAGTGCG+GGG | - | chr8.1:1744843-1744862 | MS.gene012655:intron | 55.0% | |
!! | CCGAACCAGAATTCTGGGAC+TGG | - | chr8.1:1742023-1742042 | MS.gene012655:intron | 55.0% |
!! | TGAGTGTTGGTGGTGGTGGA+GGG | + | chr8.1:1743183-1743202 | None:intergenic | 55.0% |
CAGGAAGGTTGCCTTGGGTG+AGG | - | chr8.1:1741676-1741695 | MS.gene012655:intron | 60.0% | |
CCGCTGTCTATTGGCGTGCT+AGG | - | chr8.1:1745270-1745289 | MS.gene012655:CDS | 60.0% | |
CGCAGCTCGATGCACTACGT+AGG | - | chr8.1:1740383-1740402 | MS.gene012655:intron | 60.0% | |
CTCACCCAAGGCAACCTTCC+TGG | + | chr8.1:1741678-1741697 | None:intergenic | 60.0% | |
GAAGGCCAGGAAGGTTGCCT+TGG | - | chr8.1:1741670-1741689 | MS.gene012655:intron | 60.0% | |
GATGAGGCCGTGTCCGTTGA+AGG | - | chr8.1:1740330-1740349 | MS.gene012655:intron | 60.0% | |
GCCCGTGCTTTAATGCAGGG+AGG | - | chr8.1:1741572-1741591 | MS.gene012655:intron | 60.0% | |
GGCTGCCCGTGCTTTAATGC+AGG | - | chr8.1:1741568-1741587 | MS.gene012655:intron | 60.0% | |
GGTTGCCTTGGGTGAGGATG+AGG | - | chr8.1:1741682-1741701 | MS.gene012655:intron | 60.0% | |
!! | CTGAGTGTTGGTGGTGGTGG+AGG | + | chr8.1:1743184-1743203 | None:intergenic | 60.0% |
GAGGCCGTGTCCGTTGAAGG+AGG | - | chr8.1:1740333-1740352 | MS.gene012655:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 1740199 | 1745340 | 1740199 | ID=MS.gene012655 |
chr8.1 | mRNA | 1740199 | 1745340 | 1740199 | ID=MS.gene012655.t1;Parent=MS.gene012655 |
chr8.1 | exon | 1744936 | 1745340 | 1744936 | ID=MS.gene012655.t1.exon1;Parent=MS.gene012655.t1 |
chr8.1 | CDS | 1744936 | 1745340 | 1744936 | ID=cds.MS.gene012655.t1;Parent=MS.gene012655.t1 |
chr8.1 | exon | 1743410 | 1744063 | 1743410 | ID=MS.gene012655.t1.exon2;Parent=MS.gene012655.t1 |
chr8.1 | CDS | 1743410 | 1744063 | 1743410 | ID=cds.MS.gene012655.t1;Parent=MS.gene012655.t1 |
chr8.1 | exon | 1742707 | 1743138 | 1742707 | ID=MS.gene012655.t1.exon3;Parent=MS.gene012655.t1 |
chr8.1 | CDS | 1742707 | 1743138 | 1742707 | ID=cds.MS.gene012655.t1;Parent=MS.gene012655.t1 |
chr8.1 | exon | 1740700 | 1740872 | 1740700 | ID=MS.gene012655.t1.exon4;Parent=MS.gene012655.t1 |
chr8.1 | CDS | 1740700 | 1740872 | 1740700 | ID=cds.MS.gene012655.t1;Parent=MS.gene012655.t1 |
chr8.1 | exon | 1740414 | 1740597 | 1740414 | ID=MS.gene012655.t1.exon5;Parent=MS.gene012655.t1 |
chr8.1 | CDS | 1740414 | 1740597 | 1740414 | ID=cds.MS.gene012655.t1;Parent=MS.gene012655.t1 |
chr8.1 | exon | 1740199 | 1740291 | 1740199 | ID=MS.gene012655.t1.exon6;Parent=MS.gene012655.t1 |
chr8.1 | CDS | 1740199 | 1740291 | 1740199 | ID=cds.MS.gene012655.t1;Parent=MS.gene012655.t1 |
Gene Sequence |
Protein sequence |