Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene042172.t1 | XP_003610453.1 | 97.1 | 646 | 19 | 0 | 1 | 646 | 1 | 646 | 0.00E+00 | 1245.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene042172.t1 | Q9NYH9 | 25.1 | 662 | 401 | 20 | 1 | 642 | 1 | 587 | 1.7e-45 | 185.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene042172.t1 | G7JJ94 | 97.1 | 646 | 19 | 0 | 1 | 646 | 1 | 646 | 0.0e+00 | 1245.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene042172.t1 | MTR_4g132340 | 97.059 | 646 | 19 | 0 | 1 | 646 | 1 | 646 | 0.0 | 1297 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene042172.t1 | AT4G28200 | 57.339 | 654 | 259 | 5 | 1 | 641 | 1 | 647 | 0.0 | 764 |
Find 141 sgRNAs with CRISPR-Local
Find 363 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATGACTTGCATAAAATTTA+AGG | 0.072372 | 8.4:+1756214 | None:intergenic |
ATATTGGGTTCTTCATCTTT+AGG | 0.158287 | 8.4:+1758399 | None:intergenic |
TATTGGGTTCTTCATCTTTA+GGG | 0.188228 | 8.4:+1758400 | None:intergenic |
GGAGATTTCTGTTCTTTCTT+TGG | 0.205138 | 8.4:-1756169 | MS.gene042172:CDS |
CAGTGCAGTTATGGGAATTA+AGG | 0.210628 | 8.4:-1758206 | MS.gene042172:CDS |
CCTGAGGAATTAAAATTTCT+TGG | 0.225012 | 8.4:+1758791 | None:intergenic |
ACTTGCTTTGAAGCGCTATA+AGG | 0.277394 | 8.4:-1760368 | MS.gene042172:CDS |
GCAAGCCAGTCCCAGAATTC+TGG | 0.277657 | 8.4:+1758853 | None:intergenic |
TTTCAACCGAACCAGAATTC+TGG | 0.284378 | 8.4:-1758864 | MS.gene042172:CDS |
TTGTTCTTCTTTGATTCATC+TGG | 0.286830 | 8.4:+1759063 | None:intergenic |
ATCCAAACTCCTGGAACCTT+TGG | 0.310550 | 8.4:+1759378 | None:intergenic |
ATTTGGTCAAAATTTGTCTA+AGG | 0.312536 | 8.4:+1758106 | None:intergenic |
ATGACCAAAATGTTGACTTT+TGG | 0.312802 | 8.4:-1755807 | MS.gene042172:CDS |
CTCACCCAAGGCAACCTTCC+TGG | 0.322100 | 8.4:+1759206 | None:intergenic |
CACCATAGACAGTTCGAAAA+AGG | 0.323080 | 8.4:+1759013 | None:intergenic |
GATGAAGAACCCAATATAGA+TGG | 0.325914 | 8.4:-1758393 | MS.gene042172:CDS |
AAGCTTTGCTACCAGTTTCC+TGG | 0.328198 | 8.4:+1758251 | None:intergenic |
CTTGCCAAAAGTCAACATTT+TGG | 0.336551 | 8.4:+1755803 | None:intergenic |
AGGCACTTGCAAATCTTGTT+AGG | 0.337032 | 8.4:-1759407 | MS.gene042172:CDS |
GCCCAACATCAGAAGACCTT+TGG | 0.346201 | 8.4:-1759275 | MS.gene042172:CDS |
CAACCCAGCGAAATCAGATT+TGG | 0.346257 | 8.4:+1760414 | None:intergenic |
ACCCAAAGGTTCCAGGAGTT+TGG | 0.346506 | 8.4:-1759380 | MS.gene042172:CDS |
CTGATTTCGCTGGGTTGGTT+AGG | 0.353723 | 8.4:-1760408 | MS.gene042172:CDS |
GTTCTTTCTTTGGCTAAAGA+TGG | 0.356533 | 8.4:-1756159 | MS.gene042172:CDS |
AGGCCAGAGATATCTATAAA+AGG | 0.360971 | 8.4:-1756065 | MS.gene042172:intron |
CCCAACATCAGAAGACCTTT+GGG | 0.371717 | 8.4:-1759274 | MS.gene042172:CDS |
TGCAGATTCATATAATTTCC+TGG | 0.375451 | 8.4:+1755840 | None:intergenic |
ATGACTTGCATAAAATTTAA+GGG | 0.380249 | 8.4:+1756215 | None:intergenic |
AGTGCAGTTATGGGAATTAA+GGG | 0.388281 | 8.4:-1758205 | MS.gene042172:CDS |
TCAGGTGCAAAAGGCAATTC+AGG | 0.402595 | 8.4:-1758773 | MS.gene042172:intron |
ATGTATGGCCCATCTATATT+GGG | 0.405195 | 8.4:+1758384 | None:intergenic |
TTCAACCGAACCAGAATTCT+GGG | 0.405346 | 8.4:-1758863 | MS.gene042172:CDS |
AGGTTGCACCCAAAGGTTCC+AGG | 0.405391 | 8.4:-1759387 | MS.gene042172:CDS |
TTTCTAAGATTGAGACTTGA+AGG | 0.405456 | 8.4:+1758973 | None:intergenic |
AACAAGCTACCGCTGTCTAT+TGG | 0.405697 | 8.4:-1755622 | MS.gene042172:CDS |
CTTGCTTTGAAGCGCTATAA+GGG | 0.406823 | 8.4:-1760367 | MS.gene042172:CDS |
ACATTTGCAGTTGAGACAAT+TGG | 0.409596 | 8.4:-1758280 | MS.gene042172:CDS |
ACCTTTGGGTGGAGTATCTT+CGG | 0.410834 | 8.4:-1759260 | MS.gene042172:CDS |
ATTGGATGAGGCCAGGAAAC+TGG | 0.417782 | 8.4:-1758262 | MS.gene042172:CDS |
TATGTATGGCCCATCTATAT+TGG | 0.420247 | 8.4:+1758383 | None:intergenic |
GGTTGCCTTGGGTGAGGATG+AGG | 0.428184 | 8.4:-1759199 | MS.gene042172:CDS |
TTGCAGAATCAGTGCAGTTA+TGG | 0.428214 | 8.4:-1758215 | MS.gene042172:CDS |
TCCAAACTCCTGGAACCTTT+GGG | 0.430227 | 8.4:+1759379 | None:intergenic |
CAGCCCTTTCATATATTGAC+AGG | 0.434375 | 8.4:+1758352 | None:intergenic |
GATGAGGCCGTGTCCGTTGA+AGG | 0.435930 | 8.4:-1760551 | MS.gene042172:CDS |
TTTAATTCCTCAGGTGCAAA+AGG | 0.436231 | 8.4:-1758782 | MS.gene042172:CDS |
TGCAGAATCAGTGCAGTTAT+GGG | 0.443270 | 8.4:-1758214 | MS.gene042172:CDS |
AAATCCAAATCTGATTTCGC+TGG | 0.444340 | 8.4:-1760418 | MS.gene042172:CDS |
GGATAACAAATCAGTATCAC+TGG | 0.447213 | 8.4:+1758140 | None:intergenic |
CCCAAAGGTCTTCTGATGTT+GGG | 0.447510 | 8.4:+1759274 | None:intergenic |
GCTTTGAAAAGTGTGCCTTC+AGG | 0.451194 | 8.4:-1758468 | MS.gene042172:CDS |
ACCCAAAGGTCTTCTGATGT+TGG | 0.461135 | 8.4:+1759273 | None:intergenic |
GAAGCAAACCTTGCATCAAT+AGG | 0.462444 | 8.4:-1755886 | MS.gene042172:CDS |
TTTGGATATATGCTGCAGCC+TGG | 0.462693 | 8.4:-1759362 | MS.gene042172:CDS |
TTTGTCTAAGGAGTTCGAAA+AGG | 0.466162 | 8.4:+1758118 | None:intergenic |
TTGTCTCAACTGCAAATGTA+AGG | 0.468804 | 8.4:+1758284 | None:intergenic |
ATCAGAGAACTTGTGGCTAA+AGG | 0.473103 | 8.4:-1758070 | MS.gene042172:intron |
ATAAGGGTGATATTCAACTT+TGG | 0.475919 | 8.4:-1760351 | MS.gene042172:CDS |
AAAGATGGTGGTAGTGAAAG+TGG | 0.479068 | 8.4:-1756144 | MS.gene042172:CDS |
GGCTGCCCGTGCTTTAATGC+AGG | 0.480714 | 8.4:-1759313 | MS.gene042172:CDS |
CTTCCTATATAATGCAAGGC+CGG | 0.481302 | 8.4:+1755921 | None:intergenic |
GAAGGCCAGGAAGGTTGCCT+TGG | 0.484452 | 8.4:-1759211 | MS.gene042172:CDS |
CACATACATTAACAAGTTGA+AGG | 0.486769 | 8.4:-1759229 | MS.gene042172:CDS |
CAAATCTGATTTCGCTGGGT+TGG | 0.489760 | 8.4:-1760413 | MS.gene042172:CDS |
CCAGTCCCAGAATTCTGGTT+CGG | 0.497439 | 8.4:+1758858 | None:intergenic |
ATCTCCTGTCAATATATGAA+AGG | 0.498463 | 8.4:-1758356 | MS.gene042172:CDS |
TTGTCTAAGGAGTTCGAAAA+GGG | 0.499749 | 8.4:+1758119 | None:intergenic |
AAGGCCAGGAAGGTTGCCTT+GGG | 0.501875 | 8.4:-1759210 | MS.gene042172:CDS |
TAGACGATACTTTGATAAGC+TGG | 0.506350 | 8.4:-1756193 | MS.gene042172:CDS |
CCGCTGTCTATTGGCGTGCT+AGG | 0.515561 | 8.4:-1755613 | MS.gene042172:CDS |
TTTCAAAATCAGAGAACTTG+TGG | 0.516848 | 8.4:-1758077 | MS.gene042172:CDS |
TGAGACAATTGGATGAGGCC+AGG | 0.517854 | 8.4:-1758269 | MS.gene042172:CDS |
TTCCTATATAATGCAAGGCC+GGG | 0.518118 | 8.4:+1755922 | None:intergenic |
GACAGGAGATGTGGTATGTA+TGG | 0.519034 | 8.4:+1758369 | None:intergenic |
AAAATAGTCTCGCAAATGCC+AGG | 0.523648 | 8.4:-1755858 | MS.gene042172:CDS |
AAAGAATTATTTGCTGAGCA+TGG | 0.524154 | 8.4:-1759042 | MS.gene042172:CDS |
ATCCCGGCCTTGCATTATAT+AGG | 0.525127 | 8.4:-1755924 | MS.gene042172:CDS |
AATCCAAATCTGATTTCGCT+GGG | 0.526420 | 8.4:-1760417 | MS.gene042172:CDS |
TCTCCTGTCAATATATGAAA+GGG | 0.526427 | 8.4:-1758355 | MS.gene042172:CDS |
ATATGAAAGGGCTGAAAGCA+TGG | 0.527334 | 8.4:-1758343 | MS.gene042172:CDS |
TGGGGAAGCAATAAATTCAC+TGG | 0.533228 | 8.4:+1755574 | None:intergenic |
CTTTCTTTGGCTAAAGATGG+TGG | 0.535513 | 8.4:-1756156 | MS.gene042172:CDS |
ATTGGGTTCTTCATCTTTAG+GGG | 0.537286 | 8.4:+1758401 | None:intergenic |
TTCTAAGATTGAGACTTGAA+GGG | 0.538562 | 8.4:+1758974 | None:intergenic |
TTGGATATATGCTGCAGCCT+GGG | 0.539070 | 8.4:-1759361 | MS.gene042172:CDS |
GCGCGTGAGTTGAAGAAACT+AGG | 0.539826 | 8.4:-1760457 | MS.gene042172:CDS |
GCAGCATATATCCAAACTCC+TGG | 0.541975 | 8.4:+1759369 | None:intergenic |
CAGGAAGGTTGCCTTGGGTG+AGG | 0.542496 | 8.4:-1759205 | MS.gene042172:CDS |
GTATTGCACTATGTCAGCCA+TGG | 0.543507 | 8.4:+1760684 | None:intergenic |
CTACTATCGCATGGAGGTCA+AGG | 0.543652 | 8.4:-1755779 | MS.gene042172:intron |
ACCTCCCTGCATTAAAGCAC+GGG | 0.548301 | 8.4:+1759308 | None:intergenic |
TCGATGCACTACGTAGGTTA+CGG | 0.551001 | 8.4:-1760492 | MS.gene042172:CDS |
GCAGTTGAGACAATTGGATG+AGG | 0.554938 | 8.4:-1758274 | MS.gene042172:CDS |
CGCGTGAGTTGAAGAAACTA+GGG | 0.556936 | 8.4:-1760456 | MS.gene042172:CDS |
AGAGGCGGAAATTCGAGTAC+AGG | 0.557613 | 8.4:-1760576 | MS.gene042172:CDS |
GACCTCCCTGCATTAAAGCA+CGG | 0.559052 | 8.4:+1759307 | None:intergenic |
ATATAGGAAGTGCATTGAGC+TGG | 0.561780 | 8.4:-1755908 | MS.gene042172:CDS |
TATCTAGCTTTACCGCATCC+CGG | 0.562125 | 8.4:-1755940 | MS.gene042172:CDS |
AGATACTGAACGACATGAAG+AGG | 0.563350 | 8.4:-1758891 | MS.gene042172:CDS |
ACATTAACAAGTTGAAGGCC+AGG | 0.564813 | 8.4:-1759224 | MS.gene042172:CDS |
ATGAAGAACCCAATATAGAT+GGG | 0.565040 | 8.4:-1758392 | MS.gene042172:CDS |
TATGAAAGGGCTGAAAGCAT+GGG | 0.567635 | 8.4:-1758342 | MS.gene042172:CDS |
AAGATTGAGACTTGAAGGGA+TGG | 0.570301 | 8.4:+1758978 | None:intergenic |
TCTTGTTAGGTTGCACCCAA+AGG | 0.570444 | 8.4:-1759394 | MS.gene042172:CDS |
TGATCGTAACTTGAATGTTG+TGG | 0.571370 | 8.4:-1759334 | MS.gene042172:CDS |
GACTCGTAATCCTAGAACTG+TGG | 0.572997 | 8.4:-1759169 | MS.gene042172:CDS |
TTGAAGTATAAAACTAACAA+TGG | 0.574024 | 8.4:+1756104 | None:intergenic |
TCATATATTGACAGGAGATG+TGG | 0.577193 | 8.4:+1758360 | None:intergenic |
AAATCCTCCTTCAACGGACA+CGG | 0.582690 | 8.4:+1760544 | None:intergenic |
CCGAACCAGAATTCTGGGAC+TGG | 0.583962 | 8.4:-1758858 | MS.gene042172:CDS |
TATAATGCAAGGCCGGGATG+CGG | 0.586266 | 8.4:+1755928 | None:intergenic |
TGCACTTCCTATATAATGCA+AGG | 0.587184 | 8.4:+1755917 | None:intergenic |
TAACAAGTTGAAGGCCAGGA+AGG | 0.590491 | 8.4:-1759220 | MS.gene042172:CDS |
TTGGGTGGAGTATCTTCGGA+TGG | 0.594540 | 8.4:-1759256 | MS.gene042172:CDS |
AATTCGAGTACAGGCTGATG+AGG | 0.600197 | 8.4:-1760567 | MS.gene042172:CDS |
GCTACAAAATCCTCCTTCAA+CGG | 0.606386 | 8.4:+1760538 | None:intergenic |
TTGGCAAGACTACTATCGCA+TGG | 0.606759 | 8.4:-1755788 | MS.gene042172:CDS |
AAACTAAACATAGTTCCTGA+AGG | 0.616969 | 8.4:+1758453 | None:intergenic |
GTTGCCTTGGGTGAGGATGA+GGG | 0.618019 | 8.4:-1759198 | MS.gene042172:CDS |
CAAGTTACGATCAAACTCCC+AGG | 0.624320 | 8.4:+1759344 | None:intergenic |
GATACTGAACGACATGAAGA+GGG | 0.627347 | 8.4:-1758890 | MS.gene042172:CDS |
GCTGCCCGTGCTTTAATGCA+GGG | 0.630198 | 8.4:-1759312 | MS.gene042172:CDS |
ACGATACTTTGATAAGCTGG+TGG | 0.633401 | 8.4:-1756190 | MS.gene042172:CDS |
AGTTCCCTCATCCTCACCCA+AGG | 0.637079 | 8.4:+1759194 | None:intergenic |
TGACATAGTGCAATACAAGC+TGG | 0.643441 | 8.4:-1760677 | MS.gene042172:CDS |
CTGGTAGCAAAGCTTTGCAG+CGG | 0.649670 | 8.4:-1758243 | MS.gene042172:CDS |
TCCGAAGATACTCCACCCAA+AGG | 0.653095 | 8.4:+1759259 | None:intergenic |
GATAACAAATCAGTATCACT+GGG | 0.657544 | 8.4:+1758141 | None:intergenic |
AACATCAGAAGACCTTTGGG+TGG | 0.663723 | 8.4:-1759271 | MS.gene042172:CDS |
GCCCGTGCTTTAATGCAGGG+AGG | 0.670197 | 8.4:-1759309 | MS.gene042172:CDS |
ACGAGATTGTTAAACAGAGG+CGG | 0.673954 | 8.4:-1760591 | MS.gene042172:CDS |
GAGGCCGTGTCCGTTGAAGG+AGG | 0.675188 | 8.4:-1760548 | MS.gene042172:CDS |
TTCGAAGATCTCGAGCAACG+TGG | 0.678884 | 8.4:-1760637 | MS.gene042172:CDS |
TCAAAAGGATGGAATTCACA+AGG | 0.680373 | 8.4:-1756085 | MS.gene042172:CDS |
TCGACGAGATTGTTAAACAG+AGG | 0.689269 | 8.4:-1760594 | MS.gene042172:CDS |
ACGTAGGTTACGGAAGAAGT+CGG | 0.692227 | 8.4:-1760482 | MS.gene042172:CDS |
CCTAGCACGCCAATAGACAG+CGG | 0.706749 | 8.4:+1755613 | None:intergenic |
ACATTACGAAGATATGTGCG+AGG | 0.714205 | 8.4:-1758914 | MS.gene042172:CDS |
CGCAGCTCGATGCACTACGT+AGG | 0.747048 | 8.4:-1760498 | MS.gene042172:CDS |
TAGGTTACGGAAGAAGTCGG+TGG | 0.753853 | 8.4:-1760479 | MS.gene042172:CDS |
GCAAGACTACTATCGCATGG+AGG | 0.758958 | 8.4:-1755785 | MS.gene042172:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATTAATAACAGAATTTA+GGG | + | chr8.4:1759886-1759905 | None:intergenic | 10.0% |
!!! | TTTTGTTTTTAAATTTTTAC+AGG | - | chr8.4:1756820-1756839 | MS.gene042172:intron | 10.0% |
!! | CATAATTAATAACAGAATTT+AGG | + | chr8.4:1759887-1759906 | None:intergenic | 15.0% |
!! | TAATTAATAACAGAATTTAG+GGG | + | chr8.4:1759885-1759904 | None:intergenic | 15.0% |
!! | TACATATTAGAAATTAAACT+TGG | + | chr8.4:1756735-1756754 | None:intergenic | 15.0% |
!!! | AAAGAGATTTTTTGAAATAT+TGG | - | chr8.4:1757294-1757313 | MS.gene042172:intron | 15.0% |
!!! | AATTAAACCTTTTTTTAAGA+TGG | - | chr8.4:1759690-1759709 | MS.gene042172:intron | 15.0% |
!! | AACACTATACAAAATAATTC+AGG | + | chr8.4:1759958-1759977 | None:intergenic | 20.0% |
!! | AATCAATAGATTTAAACTTG+AGG | - | chr8.4:1756638-1756657 | MS.gene042172:intron | 20.0% |
!! | AATTAATAACAGAATTTAGG+GGG | + | chr8.4:1759884-1759903 | None:intergenic | 20.0% |
!! | ATATGTAAAGCAAATAATTC+AGG | - | chr8.4:1756748-1756767 | MS.gene042172:intron | 20.0% |
!! | ATTTAAATTGTCAACACTAT+AGG | + | chr8.4:1756518-1756537 | None:intergenic | 20.0% |
!! | ATTTGATTGATAAATTATCC+AGG | + | chr8.4:1760547-1760566 | None:intergenic | 20.0% |
!! | CTTTAAATACATACAATTCA+AGG | + | chr8.4:1759823-1759842 | None:intergenic | 20.0% |
!! | TAGGAAAATTCATCATATTA+TGG | - | chr8.4:1757594-1757613 | MS.gene042172:intron | 20.0% |
!! | TCAAAATCCATCTTAAAAAA+AGG | + | chr8.4:1759700-1759719 | None:intergenic | 20.0% |
!! | TTGAAGTATAAAACTAACAA+TGG | + | chr8.4:1760146-1760165 | None:intergenic | 20.0% |
!! | TTTAAATTGTCAACACTATA+GGG | + | chr8.4:1756517-1756536 | None:intergenic | 20.0% |
!!! | AGATTTTTTGAAATATTGGA+GGG | - | chr8.4:1757298-1757317 | MS.gene042172:intron | 20.0% |
!!! | ATAATAAGTTGAAAACAACT+TGG | - | chr8.4:1756438-1756457 | MS.gene042172:intron | 20.0% |
!!! | ATGACTTGCATAAAATTTAA+GGG | + | chr8.4:1760035-1760054 | None:intergenic | 20.0% |
!!! | ATTTGCTATAAAAATTGCTT+AGG | + | chr8.4:1756132-1756151 | None:intergenic | 20.0% |
!!! | ATTTGTTTATTCCTTTTGAT+TGG | + | chr8.4:1758259-1758278 | None:intergenic | 20.0% |
!!! | GCATATATACCTTTTTTTTT+GGG | - | chr8.4:1760575-1760594 | MS.gene042172:CDS | 20.0% |
!!! | GTTGACAATTTAAATTGTTT+TGG | - | chr8.4:1756523-1756542 | MS.gene042172:intron | 20.0% |
!!! | TAAGCAATTTTTATAGCAAA+TGG | - | chr8.4:1756131-1756150 | MS.gene042172:CDS | 20.0% |
!!! | TATGACTTGCATAAAATTTA+AGG | + | chr8.4:1760036-1760055 | None:intergenic | 20.0% |
!!! | TATGGTTTTGTAATTTACTA+TGG | - | chr8.4:1757612-1757631 | MS.gene042172:intron | 20.0% |
!!! | TGATTTTGAAACATGAAATT+TGG | + | chr8.4:1758161-1758180 | None:intergenic | 20.0% |
!!! | TGCATATATACCTTTTTTTT+TGG | - | chr8.4:1760574-1760593 | MS.gene042172:CDS | 20.0% |
!!! | TGTTAGTTTTATACTTCAAA+AGG | - | chr8.4:1760147-1760166 | MS.gene042172:intron | 20.0% |
!!! | TTGTATGCAAATTTTCTAAT+GGG | - | chr8.4:1757815-1757834 | MS.gene042172:intron | 20.0% |
!!! | TTTAGTTTTCAATTACTTGT+TGG | - | chr8.4:1760509-1760528 | MS.gene042172:CDS | 20.0% |
!!! | TTTGTATGCAAATTTTCTAA+TGG | - | chr8.4:1757814-1757833 | MS.gene042172:intron | 20.0% |
!!! | TTTTGTAGGGTTAAAAAAAA+TGG | - | chr8.4:1755934-1755953 | MS.gene042172:CDS | 20.0% |
!!! | TTTTTTTTAAATAACCACTC+TGG | - | chr8.4:1759514-1759533 | MS.gene042172:intron | 20.0% |
! | AAAATCACAATTGAGAAACT+AGG | + | chr8.4:1758524-1758543 | None:intergenic | 25.0% |
! | AAATCACAATTGAGAAACTA+GGG | + | chr8.4:1758523-1758542 | None:intergenic | 25.0% |
! | AAATGAAACATGTTCAACAT+TGG | - | chr8.4:1758726-1758745 | MS.gene042172:intron | 25.0% |
! | AACAAAAAAACGTTCAACAA+TGG | + | chr8.4:1759432-1759451 | None:intergenic | 25.0% |
! | AATCAAAAAGAGATCAAATG+TGG | - | chr8.4:1759611-1759630 | MS.gene042172:intron | 25.0% |
! | AATTCAGGCACTAAAATATT+TGG | - | chr8.4:1756763-1756782 | MS.gene042172:intron | 25.0% |
! | ACTAATAATAGATCTGTGAT+GGG | - | chr8.4:1758332-1758351 | MS.gene042172:CDS | 25.0% |
! | AGATCAAAACCCAAAAAAAA+AGG | + | chr8.4:1760587-1760606 | None:intergenic | 25.0% |
! | ATAAGTTAAAATCTGAGTGT+TGG | + | chr8.4:1758562-1758581 | None:intergenic | 25.0% |
! | ATACAAAATAATTCAGGTGA+AGG | + | chr8.4:1759952-1759971 | None:intergenic | 25.0% |
! | ATATTGATCCAACAAATCAT+TGG | - | chr8.4:1757721-1757740 | MS.gene042172:intron | 25.0% |
! | ATCAAAAAGAGATCAAATGT+GGG | - | chr8.4:1759612-1759631 | MS.gene042172:intron | 25.0% |
! | ATGATAAGTGTTTATGCTAT+AGG | + | chr8.4:1756345-1756364 | None:intergenic | 25.0% |
! | ATTCAGGCACTAAAATATTT+GGG | - | chr8.4:1756764-1756783 | MS.gene042172:intron | 25.0% |
! | ATTTGGTCAAAATTTGTCTA+AGG | + | chr8.4:1758144-1758163 | None:intergenic | 25.0% |
! | CAACAAAAATAAGAGATAAG+TGG | + | chr8.4:1758213-1758232 | None:intergenic | 25.0% |
! | CTGAAATATATCTATCAATG+AGG | - | chr8.4:1758883-1758902 | MS.gene042172:CDS | 25.0% |
! | CTTATTATTATAAGCTCTCT+AGG | + | chr8.4:1756426-1756445 | None:intergenic | 25.0% |
! | TAGTGGTAAATATTAACTTC+AGG | - | chr8.4:1759198-1759217 | MS.gene042172:CDS | 25.0% |
! | TATTGATCCAACAAATCATT+GGG | - | chr8.4:1757722-1757741 | MS.gene042172:intron | 25.0% |
! | TTAGAGAGATGAACAAATTT+AGG | + | chr8.4:1759995-1760014 | None:intergenic | 25.0% |
!! | AATACATTTAGTCTTCAACT+GGG | + | chr8.4:1758464-1758483 | None:intergenic | 25.0% |
!! | ATACCTTTTATAGATATCTC+TGG | + | chr8.4:1760188-1760207 | None:intergenic | 25.0% |
!! | CTTTTCCTTTATGTGTTTTA+TGG | - | chr8.4:1757538-1757557 | MS.gene042172:intron | 25.0% |
!! | TAGTTTCTCAATTGTGATTT+TGG | - | chr8.4:1758523-1758542 | MS.gene042172:intron | 25.0% |
!!! | AGTTTTATACTTCAAAAGGA+TGG | - | chr8.4:1760151-1760170 | MS.gene042172:intron | 25.0% |
!!! | ATGATTTGTTGGATCAATAT+AGG | + | chr8.4:1757721-1757740 | None:intergenic | 25.0% |
!!! | GACAATTTAAATTGTTTTGG+TGG | - | chr8.4:1756526-1756545 | MS.gene042172:intron | 25.0% |
!!! | GAGATTTTTTGAAATATTGG+AGG | - | chr8.4:1757297-1757316 | MS.gene042172:intron | 25.0% |
!!! | GTTGAACATGTTTCATTTTT+TGG | + | chr8.4:1758724-1758743 | None:intergenic | 25.0% |
AAAAAATGGCAGAATGAAGA+AGG | - | chr8.4:1755948-1755967 | MS.gene042172:intron | 30.0% | |
AAACTAAACATAGTTCCTGA+AGG | + | chr8.4:1757797-1757816 | None:intergenic | 30.0% | |
AATCACAATTGAGAAACTAG+GGG | + | chr8.4:1758522-1758541 | None:intergenic | 30.0% | |
ACCATCCTAATACTTAAACA+CGG | + | chr8.4:1757651-1757670 | None:intergenic | 30.0% | |
ATAAGGGTGATATTCAACTT+TGG | - | chr8.4:1755896-1755915 | MS.gene042172:CDS | 30.0% | |
ATACTTAAACACGGGAAAAA+TGG | + | chr8.4:1757642-1757661 | None:intergenic | 30.0% | |
ATATTGGGTTCTTCATCTTT+AGG | + | chr8.4:1757851-1757870 | None:intergenic | 30.0% | |
ATCTCCTGTCAATATATGAA+AGG | - | chr8.4:1757891-1757910 | MS.gene042172:intron | 30.0% | |
ATGAAGAACCCAATATAGAT+GGG | - | chr8.4:1757855-1757874 | MS.gene042172:intron | 30.0% | |
CAGAGAAATATATAGATGAG+GGG | - | chr8.4:1758919-1758938 | MS.gene042172:CDS | 30.0% | |
CATAGGTAAAAAAGTAAGTC+AGG | + | chr8.4:1758426-1758445 | None:intergenic | 30.0% | |
CCAGAGAAATATATAGATGA+GGG | - | chr8.4:1758918-1758937 | MS.gene042172:CDS | 30.0% | |
CCAGAGAAATATATAGATGA+GGG | + | chr8.4:1758937-1758918 | None:intergenic | 30.0% | |
CCTGAGGAATTAAAATTTCT+TGG | + | chr8.4:1757459-1757478 | None:intergenic | 30.0% | |
CTATGGTAGAATATGATTGT+AGG | - | chr8.4:1756551-1756570 | MS.gene042172:intron | 30.0% | |
CTCAAAAATCCAATGATCAA+GGG | + | chr8.4:1758383-1758402 | None:intergenic | 30.0% | |
GAATGCTTTAACATGAAACT+AGG | - | chr8.4:1757575-1757594 | MS.gene042172:intron | 30.0% | |
GACTAATAATAGATCTGTGA+TGG | - | chr8.4:1758331-1758350 | MS.gene042172:CDS | 30.0% | |
GAGTGGTAAATATTAACTTC+AGG | + | chr8.4:1758957-1758976 | None:intergenic | 30.0% | |
GATAACAAATCAGTATCACT+GGG | + | chr8.4:1758109-1758128 | None:intergenic | 30.0% | |
GCAGGTTATAGATTATTGAA+AGG | - | chr8.4:1756706-1756725 | MS.gene042172:intron | 30.0% | |
GGTTATAGATTATTGAAAGG+TGG | - | chr8.4:1756709-1756728 | MS.gene042172:intron | 30.0% | |
GTAAGTCAGGTAATTCTATA+CGG | + | chr8.4:1758413-1758432 | None:intergenic | 30.0% | |
TAAAATGTGCTCCAATCAAA+AGG | - | chr8.4:1758245-1758264 | MS.gene042172:CDS | 30.0% | |
TAAGTCAGGTAATTCTATAC+GGG | + | chr8.4:1758412-1758431 | None:intergenic | 30.0% | |
TACTTAAACACGGGAAAAAT+GGG | + | chr8.4:1757641-1757660 | None:intergenic | 30.0% | |
TATTAGGATGGTTAGATAGA+GGG | - | chr8.4:1757659-1757678 | MS.gene042172:intron | 30.0% | |
TATTGGGTTCTTCATCTTTA+GGG | + | chr8.4:1757850-1757869 | None:intergenic | 30.0% | |
TCAAAAAGAGATCAAATGTG+GGG | - | chr8.4:1759613-1759632 | MS.gene042172:intron | 30.0% | |
TCCAGAGAAATATATAGATG+AGG | - | chr8.4:1758917-1758936 | MS.gene042172:CDS | 30.0% | |
TCCAGAGAAATATATAGATG+AGG | + | chr8.4:1758936-1758917 | None:intergenic | 30.0% | |
TCTCCTGTCAATATATGAAA+GGG | - | chr8.4:1757892-1757911 | MS.gene042172:intron | 30.0% | |
TGCAGATTCATATAATTTCC+TGG | + | chr8.4:1760410-1760429 | None:intergenic | 30.0% | |
TGGTAAATATTAACTTCAGG+AGG | - | chr8.4:1759201-1759220 | MS.gene042172:CDS | 30.0% | |
TGGTAAATATTAACTTCAGG+AGG | + | chr8.4:1759220-1759201 | None:intergenic | 30.0% | |
TTATTTGTAGCTTATAGCAC+AGG | - | chr8.4:1756072-1756091 | MS.gene042172:CDS | 30.0% | |
TTCAATAATCTATAACCTGC+TGG | + | chr8.4:1756706-1756725 | None:intergenic | 30.0% | |
TTGTTCTTCTTTGATTCATC+TGG | + | chr8.4:1757187-1757206 | None:intergenic | 30.0% | |
TTTCAAAATCAGAGAACTTG+TGG | - | chr8.4:1758170-1758189 | MS.gene042172:CDS | 30.0% | |
! | AAAGAATTATTTGCTGAGCA+TGG | - | chr8.4:1757205-1757224 | MS.gene042172:intron | 30.0% |
! | AGCACATTTTATACAAGACA+TGG | + | chr8.4:1758236-1758255 | None:intergenic | 30.0% |
! | ATTTTCCATAGTATGCTGTA+TGG | - | chr8.4:1760234-1760253 | MS.gene042172:intron | 30.0% |
! | CAATACATTTAGTCTTCAAC+TGG | + | chr8.4:1758465-1758484 | None:intergenic | 30.0% |
! | CACATACATTAACAAGTTGA+AGG | - | chr8.4:1757018-1757037 | MS.gene042172:intron | 30.0% |
! | TTCCTTTATGTGTTTTATGG+TGG | - | chr8.4:1757541-1757560 | MS.gene042172:intron | 30.0% |
! | TTTTATCTCCTATTGATGCA+AGG | + | chr8.4:1760372-1760391 | None:intergenic | 30.0% |
! | TTTTCCATAGTATGCTGTAT+GGG | - | chr8.4:1760235-1760254 | MS.gene042172:intron | 30.0% |
! | TTTTCCCGTGTTTAAGTATT+AGG | - | chr8.4:1757643-1757662 | MS.gene042172:intron | 30.0% |
!! | ATAAGTTTTGTGAGACTGTT+TGG | + | chr8.4:1756285-1756304 | None:intergenic | 30.0% |
!! | GTTTTCCTCTTTTTCATCAA+GGG | + | chr8.4:1757146-1757165 | None:intergenic | 30.0% |
!! | TAAGTTTTGTGAGACTGTTT+GGG | + | chr8.4:1756284-1756303 | None:intergenic | 30.0% |
!! | TCGTTATCTTGAGTTTTGTA+GGG | - | chr8.4:1755921-1755940 | MS.gene042172:CDS | 30.0% |
!! | TTCGTTATCTTGAGTTTTGT+AGG | - | chr8.4:1755920-1755939 | MS.gene042172:CDS | 30.0% |
!! | TTCTAAGATTGAGACTTGAA+GGG | + | chr8.4:1757276-1757295 | None:intergenic | 30.0% |
!! | TTTCTAAGATTGAGACTTGA+AGG | + | chr8.4:1757277-1757296 | None:intergenic | 30.0% |
!!! | AAATTGTTTTGGTGGTACTA+TGG | - | chr8.4:1756534-1756553 | MS.gene042172:intron | 30.0% |
!!! | ATGACCAAAATGTTGACTTT+TGG | - | chr8.4:1760440-1760459 | MS.gene042172:CDS | 30.0% |
!!! | ATTTTTTAAAATGCCCACTC+TGG | + | chr8.4:1758630-1758649 | None:intergenic | 30.0% |
!!! | CCAAGAAATTTTAATTCCTC+AGG | - | chr8.4:1757456-1757475 | MS.gene042172:intron | 30.0% |
!!! | CTGACTTACTTTTTTACCTA+TGG | - | chr8.4:1758424-1758443 | MS.gene042172:CDS | 30.0% |
!!! | TTTTTTAAAATGCCCACTCT+GGG | + | chr8.4:1758629-1758648 | None:intergenic | 30.0% |
AAAAAGAGATCAAATGTGGG+GGG | - | chr8.4:1759615-1759634 | MS.gene042172:intron | 35.0% | |
AAATCCAAATCTGATTTCGC+TGG | - | chr8.4:1755829-1755848 | MS.gene042172:CDS | 35.0% | |
AAATCCCATACAGCATACTA+TGG | + | chr8.4:1760242-1760261 | None:intergenic | 35.0% | |
AAGGATGTGATGTGAATGAA+AGG | - | chr8.4:1758787-1758806 | MS.gene042172:CDS | 35.0% | |
AAGGATGTGATGTGAATGAA+CGG | + | chr8.4:1758806-1758787 | None:intergenic | 35.0% | |
AATCCAAATCTGATTTCGCT+GGG | - | chr8.4:1755830-1755849 | MS.gene042172:CDS | 35.0% | |
AATCCAGTCAAAATCTGAGT+GGG | - | chr8.4:1759580-1759599 | MS.gene042172:intron | 35.0% | |
AATCTTGAGCTGGTTATCAA+AGG | + | chr8.4:1758760-1758779 | None:intergenic | 35.0% | |
ACAATGCAAGCTCTTTCTAA+TGG | - | chr8.4:1759293-1759312 | MS.gene042172:CDS | 35.0% | |
ACATTTGCAGTTGAGACAAT+TGG | - | chr8.4:1757967-1757986 | MS.gene042172:intron | 35.0% | |
ACTATAGGGTCTCTTTGAAT+TGG | + | chr8.4:1756503-1756522 | None:intergenic | 35.0% | |
AGCCACCATAAAACACATAA+AGG | + | chr8.4:1757546-1757565 | None:intergenic | 35.0% | |
AGGCCAGAGATATCTATAAA+AGG | - | chr8.4:1760182-1760201 | MS.gene042172:intron | 35.0% | |
AGTGCAGTTATGGGAATTAA+GGG | - | chr8.4:1758042-1758061 | MS.gene042172:intron | 35.0% | |
ATATTAACTTCAGGAGGAGT+AGG | - | chr8.4:1759207-1759226 | MS.gene042172:CDS | 35.0% | |
ATATTAACTTCAGGAGGAGT+AGG | + | chr8.4:1759226-1759207 | None:intergenic | 35.0% | |
ATCACAATTGAGAAACTAGG+GGG | + | chr8.4:1758521-1758540 | None:intergenic | 35.0% | |
ATGTATGGCCCATCTATATT+GGG | + | chr8.4:1757866-1757885 | None:intergenic | 35.0% | |
ATTGGGTTCTTCATCTTTAG+GGG | + | chr8.4:1757849-1757868 | None:intergenic | 35.0% | |
CAAAAAGAGATCAAATGTGG+GGG | - | chr8.4:1759614-1759633 | MS.gene042172:intron | 35.0% | |
CAATATAGGCGCAAGAAAAA+AGG | + | chr8.4:1757707-1757726 | None:intergenic | 35.0% | |
CAATTCAGGTACGAATATGT+AGG | - | chr8.4:1757488-1757507 | MS.gene042172:intron | 35.0% | |
CCATCCTAATACTTAAACAC+GGG | + | chr8.4:1757650-1757669 | None:intergenic | 35.0% | |
CCCTCATCTATATATTTCTC+TGG | - | chr8.4:1759234-1759253 | MS.gene042172:CDS | 35.0% | |
CCCTCATCTATATATTTCTC+TGG | + | chr8.4:1759253-1759234 | None:intergenic | 35.0% | |
CTCTAACTGTAACTCAATAC+AGG | - | chr8.4:1760009-1760028 | MS.gene042172:intron | 35.0% | |
GAACTGTGGAAGAAAAACAA+TGG | - | chr8.4:1757092-1757111 | MS.gene042172:intron | 35.0% | |
GATGAAGAACCCAATATAGA+TGG | - | chr8.4:1757854-1757873 | MS.gene042172:intron | 35.0% | |
GCAGAAAACAAATCACAAGA+GGG | + | chr8.4:1758685-1758704 | None:intergenic | 35.0% | |
GCTAAAGATTCAGAAGTTGA+AGG | + | chr8.4:1759390-1759409 | None:intergenic | 35.0% | |
GCTCAAAAATCCAATGATCA+AGG | + | chr8.4:1758384-1758403 | None:intergenic | 35.0% | |
GCTGTTATCATAAGCTATCT+TGG | - | chr8.4:1756195-1756214 | MS.gene042172:CDS | 35.0% | |
GGAGATTTCTGTTCTTTCTT+TGG | - | chr8.4:1760078-1760097 | MS.gene042172:intron | 35.0% | |
GGATAACAAATCAGTATCAC+TGG | + | chr8.4:1758110-1758129 | None:intergenic | 35.0% | |
GGTGAAGGAAAACTAAATTC+AGG | + | chr8.4:1759937-1759956 | None:intergenic | 35.0% | |
GTATTAGGATGGTTAGATAG+AGG | - | chr8.4:1757658-1757677 | MS.gene042172:intron | 35.0% | |
GTTCTTTCTTTGGCTAAAGA+TGG | - | chr8.4:1760088-1760107 | MS.gene042172:intron | 35.0% | |
TAATCCAGTCAAAATCTGAG+TGG | - | chr8.4:1759579-1759598 | MS.gene042172:intron | 35.0% | |
TAGACGATACTTTGATAAGC+TGG | - | chr8.4:1760054-1760073 | MS.gene042172:intron | 35.0% | |
TAGGATCTACTGAACTCATT+GGG | - | chr8.4:1757507-1757526 | MS.gene042172:intron | 35.0% | |
TATGACCCTTGATGAAAAAG+AGG | - | chr8.4:1757138-1757157 | MS.gene042172:intron | 35.0% | |
TATGTATGGCCCATCTATAT+TGG | + | chr8.4:1757867-1757886 | None:intergenic | 35.0% | |
TCAAAAGGATGGAATTCACA+AGG | - | chr8.4:1760162-1760181 | MS.gene042172:intron | 35.0% | |
TCAAATAAGCAGATCCAAAC+AGG | - | chr8.4:1756319-1756338 | MS.gene042172:intron | 35.0% | |
TCAACTTCTGAATCTTTAGC+TGG | - | chr8.4:1759390-1759409 | MS.gene042172:CDS | 35.0% | |
TCATATATTGACAGGAGATG+TGG | + | chr8.4:1757890-1757909 | None:intergenic | 35.0% | |
TCATATCTTGCATTTGCAAG+AGG | + | chr8.4:1758313-1758332 | None:intergenic | 35.0% | |
TCTAGGAAAGCCTATGAAAA+CGG | + | chr8.4:1756409-1756428 | None:intergenic | 35.0% | |
TCTGCAATGTAACATAGTTG+AGG | + | chr8.4:1760287-1760306 | None:intergenic | 35.0% | |
TGATCGTAACTTGAATGTTG+TGG | - | chr8.4:1756913-1756932 | MS.gene042172:intron | 35.0% | |
TGCACTTCCTATATAATGCA+AGG | + | chr8.4:1760333-1760352 | None:intergenic | 35.0% | |
TGCAGAAAACAAATCACAAG+AGG | + | chr8.4:1758686-1758705 | None:intergenic | 35.0% | |
TGTGAATGAAAGGTTAACGA+AGG | - | chr8.4:1758797-1758816 | MS.gene042172:CDS | 35.0% | |
TGTTATAGCTGCATTTGAAG+TGG | + | chr8.4:1759135-1759154 | None:intergenic | 35.0% | |
TGTTTGAGAACAACACATAG+TGG | - | chr8.4:1759181-1759200 | MS.gene042172:CDS | 35.0% | |
TTCAACAATGGAAGAGTCTT+GGG | + | chr8.4:1759420-1759439 | None:intergenic | 35.0% | |
TTGTCTAAGGAGTTCGAAAA+GGG | + | chr8.4:1758131-1758150 | None:intergenic | 35.0% | |
TTGTCTATCAATGAGGTTGA+TGG | - | chr8.4:1758843-1758862 | MS.gene042172:CDS | 35.0% | |
TTGTCTCAACTGCAAATGTA+AGG | + | chr8.4:1757966-1757985 | None:intergenic | 35.0% | |
TTGTGAAGGCTTAACTATTG+CGG | + | chr8.4:1756675-1756694 | None:intergenic | 35.0% | |
TTTAATTCCTCAGGTGCAAA+AGG | - | chr8.4:1757465-1757484 | MS.gene042172:intron | 35.0% | |
TTTGTCTAAGGAGTTCGAAA+AGG | + | chr8.4:1758132-1758151 | None:intergenic | 35.0% | |
! | ACACCAACTTTGGTTTCAAA+TGG | + | chr8.4:1759753-1759772 | None:intergenic | 35.0% |
! | CTTGCCAAAAGTCAACATTT+TGG | + | chr8.4:1760447-1760466 | None:intergenic | 35.0% |
! | GGCACTAAAATATTTGGGTT+TGG | - | chr8.4:1756769-1756788 | MS.gene042172:intron | 35.0% |
! | GTCTTTTATCCCTTGATCAT+TGG | - | chr8.4:1758371-1758390 | MS.gene042172:CDS | 35.0% |
! | TAGCTTCAATTGAGCGATTT+TGG | + | chr8.4:1759641-1759660 | None:intergenic | 35.0% |
! | TCTATAAAAGGTATGAGCAG+TGG | - | chr8.4:1760194-1760213 | MS.gene042172:intron | 35.0% |
! | TGCATTTGAAGTGGTTAACT+CGG | + | chr8.4:1759126-1759145 | None:intergenic | 35.0% |
! | TGTTGGATTTCTTTTGTACC+TGG | - | chr8.4:1760526-1760545 | MS.gene042172:CDS | 35.0% |
! | TGTTTTTCTTCCACAGTTCT+AGG | + | chr8.4:1757091-1757110 | None:intergenic | 35.0% |
! | TTGCCATTTGAAACCAAAGT+TGG | - | chr8.4:1759747-1759766 | MS.gene042172:intron | 35.0% |
!! | AGTTAAAATCTGAGTGTTGG+TGG | + | chr8.4:1758559-1758578 | None:intergenic | 35.0% |
!! | CAAGCTCTTTCTAATGGATT+TGG | - | chr8.4:1759299-1759318 | MS.gene042172:CDS | 35.0% |
!! | CGTTTTCCTCTTTTTCATCA+AGG | + | chr8.4:1757147-1757166 | None:intergenic | 35.0% |
!! | GCAACGTGTTTTGTTCTTAT+TGG | + | chr8.4:1759540-1759559 | None:intergenic | 35.0% |
!!! | AACCTTTTTCGAACTGTCTA+TGG | - | chr8.4:1757232-1757251 | MS.gene042172:intron | 35.0% |
AAAATAGTCTCGCAAATGCC+AGG | - | chr8.4:1760389-1760408 | MS.gene042172:CDS | 40.0% | |
AAGATTGAGACTTGAAGGGA+TGG | + | chr8.4:1757272-1757291 | None:intergenic | 40.0% | |
ACATTACGAAGATATGTGCG+AGG | - | chr8.4:1757333-1757352 | MS.gene042172:intron | 40.0% | |
ACGAGATTGTTAAACAGAGG+CGG | - | chr8.4:1755656-1755675 | MS.gene042172:intron | 40.0% | |
ACGATACTTTGATAAGCTGG+TGG | - | chr8.4:1760057-1760076 | MS.gene042172:intron | 40.0% | |
AGATACTGAACGACATGAAG+AGG | - | chr8.4:1757356-1757375 | MS.gene042172:intron | 40.0% | |
AGGCACTTGCAAATCTTGTT+AGG | - | chr8.4:1756840-1756859 | MS.gene042172:intron | 40.0% | |
ATATGAAAGGGCTGAAAGCA+TGG | - | chr8.4:1757904-1757923 | MS.gene042172:intron | 40.0% | |
ATCAGAGAACTTGTGGCTAA+AGG | - | chr8.4:1758177-1758196 | MS.gene042172:CDS | 40.0% | |
ATCCAGTCAAAATCTGAGTG+GGG | - | chr8.4:1759581-1759600 | MS.gene042172:intron | 40.0% | |
ATCGCTCAATTGAAGCTAGA+AGG | - | chr8.4:1759643-1759662 | MS.gene042172:intron | 40.0% | |
CAATGAGGCTAATAGAAGAG+CGG | + | chr8.4:1759269-1759288 | None:intergenic | 40.0% | |
CACCATAGACAGTTCGAAAA+AGG | + | chr8.4:1757237-1757256 | None:intergenic | 40.0% | |
CAGCCCTTTCATATATTGAC+AGG | + | chr8.4:1757898-1757917 | None:intergenic | 40.0% | |
CAGTGCAGTTATGGGAATTA+AGG | - | chr8.4:1758041-1758060 | MS.gene042172:intron | 40.0% | |
CCCGTGTTTAAGTATTAGGA+TGG | - | chr8.4:1757647-1757666 | MS.gene042172:intron | 40.0% | |
CGAGAAACAAACACCAACTT+TGG | + | chr8.4:1759763-1759782 | None:intergenic | 40.0% | |
CTCTGCATTGTCTATCAATG+AGG | - | chr8.4:1758836-1758855 | MS.gene042172:CDS | 40.0% | |
CTTCAACTTGAATCTTGAGC+TGG | + | chr8.4:1758770-1758789 | None:intergenic | 40.0% | |
CTTCCTATATAATGCAAGGC+CGG | + | chr8.4:1760329-1760348 | None:intergenic | 40.0% | |
CTTTCTTTGGCTAAAGATGG+TGG | - | chr8.4:1760091-1760110 | MS.gene042172:intron | 40.0% | |
GAAGCAAACCTTGCATCAAT+AGG | - | chr8.4:1760361-1760380 | MS.gene042172:CDS | 40.0% | |
GATACTGAACGACATGAAGA+GGG | - | chr8.4:1757357-1757376 | MS.gene042172:intron | 40.0% | |
GCTACAAAATCCTCCTTCAA+CGG | + | chr8.4:1755712-1755731 | None:intergenic | 40.0% | |
GCTTGCATTGTCTATCAATG+AGG | + | chr8.4:1759284-1759303 | None:intergenic | 40.0% | |
GTAGGATCTACTGAACTCAT+TGG | - | chr8.4:1757506-1757525 | MS.gene042172:intron | 40.0% | |
GTTCAACAATGGAAGAGTCT+TGG | + | chr8.4:1759421-1759440 | None:intergenic | 40.0% | |
GTTTATGCTATAGGCCTGTT+TGG | + | chr8.4:1756336-1756355 | None:intergenic | 40.0% | |
TATAGGCGCAAGAAAAAAGG+AGG | + | chr8.4:1757704-1757723 | None:intergenic | 40.0% | |
TCAAGGGATAAAAGACAACC+AGG | + | chr8.4:1758367-1758386 | None:intergenic | 40.0% | |
TCCAACAAATCATTGGGTTC+TGG | - | chr8.4:1757728-1757747 | MS.gene042172:intron | 40.0% | |
TCGACGAGATTGTTAAACAG+AGG | - | chr8.4:1755653-1755672 | MS.gene042172:intron | 40.0% | |
TCGCTCAATTGAAGCTAGAA+GGG | - | chr8.4:1759644-1759663 | MS.gene042172:intron | 40.0% | |
TGACATAGTGCAATACAAGC+TGG | - | chr8.4:1755570-1755589 | MS.gene042172:CDS | 40.0% | |
TGCAGAATCAGTGCAGTTAT+GGG | - | chr8.4:1758033-1758052 | MS.gene042172:intron | 40.0% | |
TGGGGAAGCAATAAATTCAC+TGG | + | chr8.4:1760676-1760695 | None:intergenic | 40.0% | |
TGTGAATGAACGGTTAACGA+AGG | + | chr8.4:1759361-1759380 | None:intergenic | 40.0% | |
TTAACGAAGGCAAAGAAGCA+GGG | + | chr8.4:1759348-1759367 | None:intergenic | 40.0% | |
TTCAACCGAACCAGAATTCT+GGG | - | chr8.4:1757384-1757403 | MS.gene042172:intron | 40.0% | |
TTCACAAAACTCATTCCAGC+AGG | - | chr8.4:1756688-1756707 | MS.gene042172:intron | 40.0% | |
TTCCTATATAATGCAAGGCC+GGG | + | chr8.4:1760328-1760347 | None:intergenic | 40.0% | |
TTGCAGAATCAGTGCAGTTA+TGG | - | chr8.4:1758032-1758051 | MS.gene042172:intron | 40.0% | |
TTGTCTGAGAAAACACAGAG+TGG | + | chr8.4:1758974-1758993 | None:intergenic | 40.0% | |
TTTCAACCGAACCAGAATTC+TGG | - | chr8.4:1757383-1757402 | MS.gene042172:intron | 40.0% | |
TTTGTTCTTATTGGCCAGAG+TGG | + | chr8.4:1759531-1759550 | None:intergenic | 40.0% | |
! | AAAGATGGTGGTAGTGAAAG+TGG | - | chr8.4:1760103-1760122 | MS.gene042172:intron | 40.0% |
! | ACATTAACAAGTTGAAGGCC+AGG | - | chr8.4:1757023-1757042 | MS.gene042172:intron | 40.0% |
! | ATATAGGAAGTGCATTGAGC+TGG | - | chr8.4:1760339-1760358 | MS.gene042172:CDS | 40.0% |
! | GCTTGTGCTATAAGCTGTTT+TGG | - | chr8.4:1756041-1756060 | MS.gene042172:intron | 40.0% |
! | TACATGGTTCTACGGTTTCT+TGG | + | chr8.4:1759041-1759060 | None:intergenic | 40.0% |
! | TATGAAAGGGCTGAAAGCAT+GGG | - | chr8.4:1757905-1757924 | MS.gene042172:intron | 40.0% |
! | TGGAGGTCAAGGTATTCAAT+TGG | - | chr8.4:1760479-1760498 | MS.gene042172:CDS | 40.0% |
!! | AATCTGCAAGCCGTTTTCAT+AGG | - | chr8.4:1756396-1756415 | MS.gene042172:intron | 40.0% |
!! | ACTTGCTTTGAAGCGCTATA+AGG | - | chr8.4:1755879-1755898 | MS.gene042172:CDS | 40.0% |
!! | CAGCTCAAGATTCAAGTTGA+AGG | - | chr8.4:1758768-1758787 | MS.gene042172:intron | 40.0% |
!! | CTTGCTTTGAAGCGCTATAA+GGG | - | chr8.4:1755880-1755899 | MS.gene042172:CDS | 40.0% |
!! | TAAAATCTGAGTGTTGGTGG+TGG | + | chr8.4:1758556-1758575 | None:intergenic | 40.0% |
!! | TCTTCAACTGGGAAAGCATT+CGG | + | chr8.4:1758453-1758472 | None:intergenic | 40.0% |
!! | TGCTGGAATGAGTTTTGTGA+AGG | + | chr8.4:1756689-1756708 | None:intergenic | 40.0% |
!! | TGGGTTTTGATCTTGCAGAT+GGG | - | chr8.4:1760594-1760613 | MS.gene042172:CDS | 40.0% |
!! | TTGGGTTTTGATCTTGCAGA+TGG | - | chr8.4:1760593-1760612 | MS.gene042172:CDS | 40.0% |
!!! | CTTTTTCGAACTGTCTATGG+TGG | - | chr8.4:1757235-1757254 | MS.gene042172:intron | 40.0% |
AAATCCTCCTTCAACGGACA+CGG | + | chr8.4:1755706-1755725 | None:intergenic | 45.0% | |
AACAAGCTACCGCTGTCTAT+TGG | - | chr8.4:1760625-1760644 | MS.gene042172:CDS | 45.0% | |
AACATCAGAAGACCTTTGGG+TGG | - | chr8.4:1756976-1756995 | MS.gene042172:intron | 45.0% | |
AAGCTTTGCTACCAGTTTCC+TGG | + | chr8.4:1757999-1758018 | None:intergenic | 45.0% | |
AATTCGAGTACAGGCTGATG+AGG | - | chr8.4:1755680-1755699 | MS.gene042172:intron | 45.0% | |
ACCCAAAGGTCTTCTGATGT+TGG | + | chr8.4:1756977-1756996 | None:intergenic | 45.0% | |
ACGTAGGTTACGGAAGAAGT+CGG | - | chr8.4:1755765-1755784 | MS.gene042172:intron | 45.0% | |
ATCCAAACTCCTGGAACCTT+TGG | + | chr8.4:1756872-1756891 | None:intergenic | 45.0% | |
ATCCCGGCCTTGCATTATAT+AGG | - | chr8.4:1760323-1760342 | MS.gene042172:CDS | 45.0% | |
CAAAGAATGCAAAGGAACCG+TGG | + | chr8.4:1759100-1759119 | None:intergenic | 45.0% | |
CAAATCTGATTTCGCTGGGT+TGG | - | chr8.4:1755834-1755853 | MS.gene042172:CDS | 45.0% | |
CAACCCAGCGAAATCAGATT+TGG | + | chr8.4:1755836-1755855 | None:intergenic | 45.0% | |
CAAGTTACGATCAAACTCCC+AGG | + | chr8.4:1756906-1756925 | None:intergenic | 45.0% | |
CCCAAAGGTCTTCTGATGTT+GGG | + | chr8.4:1756976-1756995 | None:intergenic | 45.0% | |
CCCAACATCAGAAGACCTTT+GGG | - | chr8.4:1756973-1756992 | MS.gene042172:intron | 45.0% | |
CGCTCAATTGAAGCTAGAAG+GGG | - | chr8.4:1759645-1759664 | MS.gene042172:intron | 45.0% | |
CTCGGCAACAAAGAATGCAA+AGG | + | chr8.4:1759108-1759127 | None:intergenic | 45.0% | |
GACAGGAGATGTGGTATGTA+TGG | + | chr8.4:1757881-1757900 | None:intergenic | 45.0% | |
GACTCGTAATCCTAGAACTG+TGG | - | chr8.4:1757078-1757097 | MS.gene042172:intron | 45.0% | |
GCAGCATATATCCAAACTCC+TGG | + | chr8.4:1756881-1756900 | None:intergenic | 45.0% | |
GCAGTTGAGACAATTGGATG+AGG | - | chr8.4:1757973-1757992 | MS.gene042172:intron | 45.0% | |
GGCCAAAATCGCACAATTGA+GGG | - | chr8.4:1759666-1759685 | MS.gene042172:intron | 45.0% | |
GTAGAACCATGTACGTGTGT+CGG | - | chr8.4:1759048-1759067 | MS.gene042172:CDS | 45.0% | |
GTTAACGAAGGCAAAGAAGC+AGG | + | chr8.4:1759349-1759368 | None:intergenic | 45.0% | |
GTTAACGAAGGCAAGAAGCA+AGG | - | chr8.4:1758809-1758828 | MS.gene042172:CDS | 45.0% | |
TATGAGCAGTGGAATCAGTG+CGG | - | chr8.4:1760205-1760224 | MS.gene042172:intron | 45.0% | |
TCAGGTGCAAAAGGCAATTC+AGG | - | chr8.4:1757474-1757493 | MS.gene042172:intron | 45.0% | |
TCATTCCTATTGCCCAGAGT+GGG | - | chr8.4:1758614-1758633 | MS.gene042172:intron | 45.0% | |
TCCAAACTCCTGGAACCTTT+GGG | + | chr8.4:1756871-1756890 | None:intergenic | 45.0% | |
TCCAGTCAAAATCTGAGTGG+GGG | - | chr8.4:1759582-1759601 | MS.gene042172:intron | 45.0% | |
TCGATGCACTACGTAGGTTA+CGG | - | chr8.4:1755755-1755774 | MS.gene042172:intron | 45.0% | |
TGTTGTAGTTGCGTCTGTTG+TGG | - | chr8.4:1758994-1759013 | MS.gene042172:CDS | 45.0% | |
TTCATTCCTATTGCCCAGAG+TGG | - | chr8.4:1758613-1758632 | MS.gene042172:intron | 45.0% | |
TTGGATATATGCTGCAGCCT+GGG | - | chr8.4:1756886-1756905 | MS.gene042172:intron | 45.0% | |
TTGGCAAGACTACTATCGCA+TGG | - | chr8.4:1760459-1760478 | MS.gene042172:CDS | 45.0% | |
TTTGGATATATGCTGCAGCC+TGG | - | chr8.4:1756885-1756904 | MS.gene042172:intron | 45.0% | |
! | ACCTTTGGGTGGAGTATCTT+CGG | - | chr8.4:1756987-1757006 | MS.gene042172:intron | 45.0% |
! | CGCGTGAGTTGAAGAAACTA+GGG | - | chr8.4:1755791-1755810 | MS.gene042172:CDS | 45.0% |
! | GACACACGTACATGGTTCTA+CGG | + | chr8.4:1759049-1759068 | None:intergenic | 45.0% |
! | GCCAGAACCCAATGATTTGT+TGG | + | chr8.4:1757732-1757751 | None:intergenic | 45.0% |
! | TAACAAGTTGAAGGCCAGGA+AGG | - | chr8.4:1757027-1757046 | MS.gene042172:intron | 45.0% |
! | TCTTGTTAGGTTGCACCCAA+AGG | - | chr8.4:1756853-1756872 | MS.gene042172:intron | 45.0% |
! | TGAATTGCCTTTTGCACCTG+AGG | + | chr8.4:1757475-1757494 | None:intergenic | 45.0% |
! | TGCCCTCAATTGTGCGATTT+TGG | + | chr8.4:1759671-1759690 | None:intergenic | 45.0% |
!! | AGGAGGCACTGTAAAATGCT+TGG | + | chr8.4:1757687-1757706 | None:intergenic | 45.0% |
!! | GCTTTGAAAAGTGTGCCTTC+AGG | - | chr8.4:1757779-1757798 | MS.gene042172:intron | 45.0% |
!! | GGAAAGCATTCGGATACCAT+AGG | + | chr8.4:1758443-1758462 | None:intergenic | 45.0% |
!! | TATCTAGCTTTACCGCATCC+CGG | - | chr8.4:1760307-1760326 | MS.gene042172:CDS | 45.0% |
!! | TGTGATGGGTTTAGAACACC+TGG | - | chr8.4:1758346-1758365 | MS.gene042172:CDS | 45.0% |
!! | TTCTGGCTTTGATCTGTTGC+AGG | - | chr8.4:1757745-1757764 | MS.gene042172:intron | 45.0% |
AAATGCCCACTCTGGGCAAT+AGG | + | chr8.4:1758622-1758641 | None:intergenic | 50.0% | |
ACCCAAAGGTTCCAGGAGTT+TGG | - | chr8.4:1756867-1756886 | MS.gene042172:intron | 50.0% | |
ACCTCCCTGCATTAAAGCAC+GGG | + | chr8.4:1756942-1756961 | None:intergenic | 50.0% | |
AGAGGCGGAAATTCGAGTAC+AGG | - | chr8.4:1755671-1755690 | MS.gene042172:intron | 50.0% | |
ATGAGCAGTGGAATCAGTGC+GGG | - | chr8.4:1760206-1760225 | MS.gene042172:intron | 50.0% | |
ATTGGATGAGGCCAGGAAAC+TGG | - | chr8.4:1757985-1758004 | MS.gene042172:intron | 50.0% | |
CACAACATGAAACACGCGCA+TGG | - | chr8.4:1759072-1759091 | MS.gene042172:CDS | 50.0% | |
CTACTATCGCATGGAGGTCA+AGG | - | chr8.4:1760468-1760487 | MS.gene042172:CDS | 50.0% | |
CTGGTAGCAAAGCTTTGCAG+CGG | - | chr8.4:1758004-1758023 | MS.gene042172:intron | 50.0% | |
GACCTCCCTGCATTAAAGCA+CGG | + | chr8.4:1756943-1756962 | None:intergenic | 50.0% | |
GCAAGACTACTATCGCATGG+AGG | - | chr8.4:1760462-1760481 | MS.gene042172:CDS | 50.0% | |
GCCCAACATCAGAAGACCTT+TGG | - | chr8.4:1756972-1756991 | MS.gene042172:intron | 50.0% | |
GGGCCAAAATCGCACAATTG+AGG | - | chr8.4:1759665-1759684 | MS.gene042172:intron | 50.0% | |
TAGGTTACGGAAGAAGTCGG+TGG | - | chr8.4:1755768-1755787 | MS.gene042172:intron | 50.0% | |
TATAATGCAAGGCCGGGATG+CGG | + | chr8.4:1760322-1760341 | None:intergenic | 50.0% | |
TCCGAAGATACTCCACCCAA+AGG | + | chr8.4:1756991-1757010 | None:intergenic | 50.0% | |
TGAGACAATTGGATGAGGCC+AGG | - | chr8.4:1757978-1757997 | MS.gene042172:intron | 50.0% | |
TTCGAAGATCTCGAGCAACG+TGG | - | chr8.4:1755610-1755629 | MS.gene042172:CDS | 50.0% | |
TTGTGACCGACACACGTACA+TGG | + | chr8.4:1759057-1759076 | None:intergenic | 50.0% | |
! | CCAGTCCCAGAATTCTGGTT+CGG | + | chr8.4:1757392-1757411 | None:intergenic | 50.0% |
! | GCGCGTGAGTTGAAGAAACT+AGG | - | chr8.4:1755790-1755809 | MS.gene042172:CDS | 50.0% |
! | TTGGGTGGAGTATCTTCGGA+TGG | - | chr8.4:1756991-1757010 | MS.gene042172:intron | 50.0% |
!! | AATCTGAGTGTTGGTGGTGG+TGG | + | chr8.4:1758553-1758572 | None:intergenic | 50.0% |
!! | CTGATTTCGCTGGGTTGGTT+AGG | - | chr8.4:1755839-1755858 | MS.gene042172:CDS | 50.0% |
!! | TCCCCCACTCAGATTTTGAC+TGG | + | chr8.4:1759586-1759605 | None:intergenic | 50.0% |
AAGGCCAGGAAGGTTGCCTT+GGG | - | chr8.4:1757037-1757056 | MS.gene042172:intron | 55.0% | |
AGGTTGCACCCAAAGGTTCC+AGG | - | chr8.4:1756860-1756879 | MS.gene042172:intron | 55.0% | |
AGTTCCCTCATCCTCACCCA+AGG | + | chr8.4:1757056-1757075 | None:intergenic | 55.0% | |
CCTAGCACGCCAATAGACAG+CGG | + | chr8.4:1760637-1760656 | None:intergenic | 55.0% | |
GAAACACGCGCATGGTTCCA+CGG | - | chr8.4:1759080-1759099 | MS.gene042172:CDS | 55.0% | |
GCAAGCCAGTCCCAGAATTC+TGG | + | chr8.4:1757397-1757416 | None:intergenic | 55.0% | |
GCTGCCCGTGCTTTAATGCA+GGG | - | chr8.4:1756935-1756954 | MS.gene042172:intron | 55.0% | |
GTTGCCTTGGGTGAGGATGA+GGG | - | chr8.4:1757049-1757068 | MS.gene042172:intron | 55.0% | |
TGAGCAGTGGAATCAGTGCG+GGG | - | chr8.4:1760207-1760226 | MS.gene042172:intron | 55.0% | |
!! | CCGAACCAGAATTCTGGGAC+TGG | - | chr8.4:1757389-1757408 | MS.gene042172:intron | 55.0% |
!! | TGAGTGTTGGTGGTGGTGGA+GGG | + | chr8.4:1758549-1758568 | None:intergenic | 55.0% |
CAGGAAGGTTGCCTTGGGTG+AGG | - | chr8.4:1757042-1757061 | MS.gene042172:intron | 60.0% | |
CCGCTGTCTATTGGCGTGCT+AGG | - | chr8.4:1760634-1760653 | MS.gene042172:CDS | 60.0% | |
CGCAGCTCGATGCACTACGT+AGG | - | chr8.4:1755749-1755768 | MS.gene042172:intron | 60.0% | |
CTCACCCAAGGCAACCTTCC+TGG | + | chr8.4:1757044-1757063 | None:intergenic | 60.0% | |
GAAGGCCAGGAAGGTTGCCT+TGG | - | chr8.4:1757036-1757055 | MS.gene042172:intron | 60.0% | |
GATGAGGCCGTGTCCGTTGA+AGG | - | chr8.4:1755696-1755715 | MS.gene042172:intron | 60.0% | |
GCCCGTGCTTTAATGCAGGG+AGG | - | chr8.4:1756938-1756957 | MS.gene042172:intron | 60.0% | |
GGCTGCCCGTGCTTTAATGC+AGG | - | chr8.4:1756934-1756953 | MS.gene042172:intron | 60.0% | |
GGTTGCCTTGGGTGAGGATG+AGG | - | chr8.4:1757048-1757067 | MS.gene042172:intron | 60.0% | |
!! | CTGAGTGTTGGTGGTGGTGG+AGG | + | chr8.4:1758550-1758569 | None:intergenic | 60.0% |
GAGGCCGTGTCCGTTGAAGG+AGG | - | chr8.4:1755699-1755718 | MS.gene042172:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 1755565 | 1760704 | 1755565 | ID=MS.gene042172 |
chr8.4 | mRNA | 1755565 | 1760704 | 1755565 | ID=MS.gene042172.t1;Parent=MS.gene042172 |
chr8.4 | exon | 1760300 | 1760704 | 1760300 | ID=MS.gene042172.t1.exon1;Parent=MS.gene042172.t1 |
chr8.4 | CDS | 1760300 | 1760704 | 1760300 | ID=cds.MS.gene042172.t1;Parent=MS.gene042172.t1 |
chr8.4 | exon | 1758774 | 1759427 | 1758774 | ID=MS.gene042172.t1.exon2;Parent=MS.gene042172.t1 |
chr8.4 | CDS | 1758774 | 1759427 | 1758774 | ID=cds.MS.gene042172.t1;Parent=MS.gene042172.t1 |
chr8.4 | exon | 1758071 | 1758502 | 1758071 | ID=MS.gene042172.t1.exon3;Parent=MS.gene042172.t1 |
chr8.4 | CDS | 1758071 | 1758502 | 1758071 | ID=cds.MS.gene042172.t1;Parent=MS.gene042172.t1 |
chr8.4 | exon | 1756066 | 1756238 | 1756066 | ID=MS.gene042172.t1.exon4;Parent=MS.gene042172.t1 |
chr8.4 | CDS | 1756066 | 1756238 | 1756066 | ID=cds.MS.gene042172.t1;Parent=MS.gene042172.t1 |
chr8.4 | exon | 1755780 | 1755963 | 1755780 | ID=MS.gene042172.t1.exon5;Parent=MS.gene042172.t1 |
chr8.4 | CDS | 1755780 | 1755963 | 1755780 | ID=cds.MS.gene042172.t1;Parent=MS.gene042172.t1 |
chr8.4 | exon | 1755565 | 1755657 | 1755565 | ID=MS.gene042172.t1.exon6;Parent=MS.gene042172.t1 |
chr8.4 | CDS | 1755565 | 1755657 | 1755565 | ID=cds.MS.gene042172.t1;Parent=MS.gene042172.t1 |
Gene Sequence |
Protein sequence |