Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04780.t1 | XP_003630831.2 | 97.3 | 111 | 3 | 0 | 1 | 111 | 1 | 111 | 4.30E-51 | 211.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04780.t1 | A0L5Z9 | 55.6 | 108 | 47 | 1 | 5 | 111 | 8 | 115 | 3.7e-27 | 122.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04780.t1 | G7L907 | 97.3 | 111 | 3 | 0 | 1 | 111 | 1 | 111 | 3.1e-51 | 211.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene04780 | MS.gene028903 | PPI |
| MS.gene015732 | MS.gene04780 | PPI |
| MS.gene05937 | MS.gene04780 | PPI |
| MS.gene60861 | MS.gene04780 | PPI |
| MS.gene043435 | MS.gene04780 | PPI |
| MS.gene04780 | MS.gene82915 | PPI |
| MS.gene001446 | MS.gene04780 | PPI |
| MS.gene34167 | MS.gene04780 | PPI |
| MS.gene001687 | MS.gene04780 | PPI |
| MS.gene60589 | MS.gene04780 | PPI |
| MS.gene013330 | MS.gene04780 | PPI |
| MS.gene026968 | MS.gene04780 | PPI |
| MS.gene001444 | MS.gene04780 | PPI |
| MS.gene30981 | MS.gene04780 | PPI |
| MS.gene049140 | MS.gene04780 | PPI |
| MS.gene04780 | MS.gene005865 | PPI |
| MS.gene055808 | MS.gene04780 | PPI |
| MS.gene04780 | MS.gene001446 | PPI |
| MS.gene06427 | MS.gene04780 | PPI |
| MS.gene31468 | MS.gene04780 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04780.t1 | MTR_8g103900 | 97.297 | 111 | 3 | 0 | 1 | 111 | 1 | 111 | 4.46e-75 | 222 |
| MS.gene04780.t1 | MTR_3g095900 | 95.495 | 111 | 5 | 0 | 1 | 111 | 1 | 111 | 2.25e-73 | 218 |
| MS.gene04780.t1 | MTR_3g062930 | 44.037 | 109 | 61 | 0 | 3 | 111 | 104 | 212 | 2.12e-27 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04780.t1 | AT5G09770 | 83.784 | 111 | 18 | 0 | 1 | 111 | 1 | 111 | 3.25e-65 | 197 |
| MS.gene04780.t1 | AT5G64650 | 83.784 | 111 | 18 | 0 | 1 | 111 | 1 | 111 | 5.15e-65 | 197 |
| MS.gene04780.t1 | AT3G54210 | 45.283 | 106 | 58 | 0 | 6 | 111 | 104 | 209 | 1.02e-27 | 103 |
Find 52 sgRNAs with CRISPR-Local
Find 391 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAGGCTAAGGAGGTTAGA+AGG | 0.294585 | 4.2:-1969336 | MS.gene04780:intron |
| CGCCGTAGATCCCGTCATTT+CGG | 0.323158 | 4.2:-1964604 | MS.gene04780:CDS |
| TAGAAGGGTTGCAGATAATA+TGG | 0.357326 | 4.2:-1969320 | MS.gene04780:CDS |
| ACGAAAGTGGAAGATGTTAA+TGG | 0.380021 | 4.2:-1964502 | MS.gene04780:CDS |
| TGTTTACAGAACTGGCTTAT+CGG | 0.384907 | 4.2:-1966307 | MS.gene04780:CDS |
| TCACAAGCTGTTTACAGAAC+TGG | 0.397878 | 4.2:-1966315 | MS.gene04780:CDS |
| TCAGTGCGGCGACGCTTCCT+TGG | 0.404357 | 4.2:-1964668 | MS.gene04780:intron |
| TCGATTCAGCTTCCTGAACT+TGG | 0.412475 | 4.2:+1969634 | None:intergenic |
| CAACGAAAATGACCAAGTTC+AGG | 0.422662 | 4.2:-1969646 | None:intergenic |
| GCCTTTCTTGACGTCGGAAA+AGG | 0.443192 | 4.2:+1964526 | None:intergenic |
| AAGATGTTAATGGATGGAAC+TGG | 0.448437 | 4.2:-1964492 | MS.gene04780:CDS |
| AATAGAGATTTACTCAATAT+AGG | 0.449161 | 4.2:+1966126 | None:intergenic |
| TTAGGCTAAGGAGGTTAGAA+GGG | 0.463555 | 4.2:-1969335 | MS.gene04780:intron |
| GGGATCTACGGCGGTTCCCA+TGG | 0.482335 | 4.2:+1964614 | None:intergenic |
| ATGGATTCAATTTGTGCCGA+TGG | 0.484184 | 4.2:+1964633 | None:intergenic |
| ATCGGCACAAATTGAATCCA+TGG | 0.488665 | 4.2:-1964631 | MS.gene04780:CDS |
| TTAACCTGAGCATGGATATC+CGG | 0.493435 | 4.2:+1969600 | None:intergenic |
| CACCGCTGTGTCCGAAATGA+CGG | 0.498115 | 4.2:+1964593 | None:intergenic |
| AGCACGCCTTGCAGCACATA+CGG | 0.513486 | 4.2:+1966367 | None:intergenic |
| GTCAAGAAAGGCGACGAAAG+TGG | 0.515280 | 4.2:-1964515 | MS.gene04780:CDS |
| TATGGTACAGCTTGGTAAAG+AGG | 0.517654 | 4.2:-1969302 | MS.gene04780:intron |
| TTGGATTGATTTCAAACCAT+CGG | 0.528967 | 4.2:-1964649 | MS.gene04780:CDS |
| GTCCGAAATGACGGGATCTA+CGG | 0.540132 | 4.2:+1964602 | None:intergenic |
| TAGAACCATGGTCTCGCAGT+TGG | 0.542039 | 4.2:-1969494 | MS.gene04780:CDS |
| TGAATCGAGAAACGTCTCAC+CGG | 0.546451 | 4.2:-1969619 | MS.gene04780:CDS |
| ACCGCTGTGTCCGAAATGAC+GGG | 0.548896 | 4.2:+1964594 | None:intergenic |
| TTGTTATTTATTTAGAACCA+TGG | 0.549464 | 4.2:-1969506 | MS.gene04780:intron |
| ATTTACTCAATATAGGCCAT+TGG | 0.558368 | 4.2:+1966133 | None:intergenic |
| AGATGTTAATGGATGGAACT+GGG | 0.565188 | 4.2:-1964491 | MS.gene04780:CDS |
| ATAGAACTGGTGGATACACT+AGG | 0.567688 | 4.2:-1966192 | MS.gene04780:CDS |
| CTCACCGGATATCCATGCTC+AGG | 0.569855 | 4.2:-1969604 | MS.gene04780:intron |
| AGTTGGTGATGCTGCACCAA+TGG | 0.577706 | 4.2:-1966149 | MS.gene04780:CDS |
| CCATGGTCTCGCAGTTGGTG+AGG | 0.580724 | 4.2:-1969489 | MS.gene04780:CDS |
| GTGGATACACTAGGGTGCTA+CGG | 0.583066 | 4.2:-1966183 | MS.gene04780:CDS |
| AAGTGGAAGATGTTAATGGA+TGG | 0.583786 | 4.2:-1964498 | MS.gene04780:CDS |
| GCAGATAATATGGTACAGCT+TGG | 0.590005 | 4.2:-1969310 | MS.gene04780:CDS |
| TTCGTCGCCTTTCTTGACGT+CGG | 0.592673 | 4.2:+1964520 | None:intergenic |
| CATTGAAACTACTATTGCCA+AGG | 0.598171 | 4.2:-1969458 | MS.gene04780:intron |
| CTACGGACTCGCATTCGAGT+TGG | 0.599565 | 4.2:-1966166 | MS.gene04780:CDS |
| CCTCACCAACTGCGAGACCA+TGG | 0.601685 | 4.2:+1969489 | None:intergenic |
| AGGGATCCGTATGTGCTGCA+AGG | 0.603781 | 4.2:-1966373 | MS.gene04780:CDS |
| AAAGCATGTTAACCTGAGCA+TGG | 0.605726 | 4.2:+1969592 | None:intergenic |
| TCGGAAAAGGCAATTTCCAT+CGG | 0.608170 | 4.2:+1964539 | None:intergenic |
| GTGTTGTGCAGAGATAGAAC+TGG | 0.623312 | 4.2:-1966205 | MS.gene04780:intron |
| TCGGCACAAATTGAATCCAT+GGG | 0.627982 | 4.2:-1964630 | MS.gene04780:CDS |
| GATGGTTTGAAATCAATCCA+AGG | 0.633311 | 4.2:+1964651 | None:intergenic |
| TTGTGCAGAGATAGAACTGG+TGG | 0.666108 | 4.2:-1966202 | MS.gene04780:intron |
| CGTGCTGCTAGTTTCGTGCG+AGG | 0.668394 | 4.2:-1966350 | MS.gene04780:CDS |
| TAGAACTGGTGGATACACTA+GGG | 0.675074 | 4.2:-1966191 | MS.gene04780:CDS |
| CGAAATGACGGGATCTACGG+CGG | 0.677481 | 4.2:+1964605 | None:intergenic |
| GATGTTAATGGATGGAACTG+GGG | 0.689085 | 4.2:-1964490 | MS.gene04780:CDS |
| TCCCGTCATTTCGGACACAG+CGG | 0.739039 | 4.2:-1964595 | MS.gene04780:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATAAAATGTTTATAATT+TGG | - | chr4.2:1966885-1966904 | MS.gene04780:intron | 10.0% |
| !! | TATAAAATAAGAAAAAATTC+AGG | + | chr4.2:1968460-1968479 | None:intergenic | 10.0% |
| !!! | AAATTTTATTTATATTACCT+TGG | + | chr4.2:1964679-1964698 | None:intergenic | 10.0% |
| !!! | ATGTTTTTCAAATAAAAATA+AGG | + | chr4.2:1969397-1969416 | None:intergenic | 10.0% |
| !! | ATTAAAAAATTGTATTGGAA+AGG | + | chr4.2:1965395-1965414 | None:intergenic | 15.0% |
| !! | TTAAAAAATTGTATTGGAAA+GGG | + | chr4.2:1965394-1965413 | None:intergenic | 15.0% |
| !!! | AATAGTTTTTAGTTGTTTAA+TGG | - | chr4.2:1968750-1968769 | MS.gene04780:intron | 15.0% |
| !!! | ATAGTTTTTAGTTGTTTAAT+GGG | - | chr4.2:1968751-1968770 | MS.gene04780:intron | 15.0% |
| !! | AAAAGAAAAGCTTAAAAGAT+CGG | - | chr4.2:1968592-1968611 | MS.gene04780:intron | 20.0% |
| !! | AACAAAAGTAGAGAAAAATA+AGG | + | chr4.2:1967049-1967068 | None:intergenic | 20.0% |
| !! | AATAGAGATTTACTCAATAT+AGG | + | chr4.2:1967994-1968013 | None:intergenic | 20.0% |
| !! | AATGCTTGAAATATAAAGAA+TGG | - | chr4.2:1967150-1967169 | MS.gene04780:intron | 20.0% |
| !! | ACAGAAATAAAACATAAATG+AGG | + | chr4.2:1967385-1967404 | None:intergenic | 20.0% |
| !! | AGGAAAAAAAAAAATAGGAA+TGG | + | chr4.2:1964564-1964583 | None:intergenic | 20.0% |
| !! | AGTAATTGATATTTGTTTGT+TGG | - | chr4.2:1967093-1967112 | MS.gene04780:intron | 20.0% |
| !! | AGTGCAAAATCTAATAATAA+TGG | + | chr4.2:1966992-1967011 | None:intergenic | 20.0% |
| !! | ATAAATATTGAGTAAATCAG+TGG | - | chr4.2:1965863-1965882 | MS.gene04780:intron | 20.0% |
| !! | CTCTTGTATACATATTTAAT+TGG | - | chr4.2:1966730-1966749 | MS.gene04780:intron | 20.0% |
| !! | GAAAAAATATTGTTTGTTCA+AGG | + | chr4.2:1965797-1965816 | None:intergenic | 20.0% |
| !! | GGAAAAAAAAAAATAGGAAT+GGG | + | chr4.2:1964563-1964582 | None:intergenic | 20.0% |
| !! | GTAGTTATAATATTAATAGC+AGG | + | chr4.2:1965940-1965959 | None:intergenic | 20.0% |
| !! | TAAATATGTATACAAGAGAA+GGG | + | chr4.2:1966728-1966747 | None:intergenic | 20.0% |
| !! | TAAATATTGAGTAAATCAGT+GGG | - | chr4.2:1965864-1965883 | MS.gene04780:intron | 20.0% |
| !! | TACATTATTTCAATAGGAAA+AGG | - | chr4.2:1968890-1968909 | MS.gene04780:intron | 20.0% |
| !! | TTAAATATGTATACAAGAGA+AGG | + | chr4.2:1966729-1966748 | None:intergenic | 20.0% |
| !! | TTGGAAGGAAAAAAAAAAAT+AGG | + | chr4.2:1964569-1964588 | None:intergenic | 20.0% |
| !! | TTTACTCAATATTTATCTTC+AGG | + | chr4.2:1965859-1965878 | None:intergenic | 20.0% |
| !!! | AATTTGATTGTATGCATTTT+CGG | - | chr4.2:1964694-1964713 | MS.gene04780:intron | 20.0% |
| !!! | CAAACAATATTTTTTCAAAC+TGG | - | chr4.2:1965801-1965820 | MS.gene04780:intron | 20.0% |
| !!! | TAATGAGTTGGATAAAAATA+TGG | - | chr4.2:1965622-1965641 | MS.gene04780:intron | 20.0% |
| !!! | TTGATTTTCATCCTTTAAAA+AGG | - | chr4.2:1968812-1968831 | MS.gene04780:intron | 20.0% |
| !!! | TTGTTATTTATTTAGAACCA+TGG | - | chr4.2:1964611-1964630 | MS.gene04780:CDS | 20.0% |
| ! | AAAAAAAAAATAGGAATGGG+AGG | + | chr4.2:1964560-1964579 | None:intergenic | 25.0% |
| ! | AAAATAGGGATGTACTAATA+TGG | - | chr4.2:1966366-1966385 | MS.gene04780:CDS | 25.0% |
| ! | AAAATCAAGTTTAAATGGCT+TGG | + | chr4.2:1968800-1968819 | None:intergenic | 25.0% |
| ! | AAAGTAGAGAAAAATAAGGA+AGG | + | chr4.2:1967045-1967064 | None:intergenic | 25.0% |
| ! | AACAAATAAAACTAACCTCA+TGG | - | chr4.2:1968941-1968960 | MS.gene04780:intron | 25.0% |
| ! | AACATCTATATTATTCCTTC+AGG | + | chr4.2:1966779-1966798 | None:intergenic | 25.0% |
| ! | AAGAACAATTAACTTAATGC+AGG | - | chr4.2:1967192-1967211 | MS.gene04780:intron | 25.0% |
| ! | AATCTTAATATCCTTAGTCT+AGG | + | chr4.2:1968184-1968203 | None:intergenic | 25.0% |
| ! | ACACAATAGATTAAAAAGAC+AGG | + | chr4.2:1968124-1968143 | None:intergenic | 25.0% |
| ! | AGAACAATTAACTTAATGCA+GGG | - | chr4.2:1967193-1967212 | MS.gene04780:intron | 25.0% |
| ! | AGTAGTATCAATATGATTAG+TGG | - | chr4.2:1966337-1966356 | MS.gene04780:CDS | 25.0% |
| ! | AGTTTACATGATAAACTGTT+AGG | - | chr4.2:1967724-1967743 | MS.gene04780:intron | 25.0% |
| ! | ATATTATTCCTTCAGGAAAA+CGG | + | chr4.2:1966772-1966791 | None:intergenic | 25.0% |
| ! | ATCTTGAGCATAAATTTGAT+AGG | - | chr4.2:1967650-1967669 | MS.gene04780:intron | 25.0% |
| ! | ATTAGTGGAAGAGTAAAATA+GGG | - | chr4.2:1966352-1966371 | MS.gene04780:CDS | 25.0% |
| ! | GATAATGAGTAGCAATAAAA+TGG | - | chr4.2:1966388-1966407 | MS.gene04780:intron | 25.0% |
| ! | GGATGAAAATCAAGTTTAAA+TGG | + | chr4.2:1968805-1968824 | None:intergenic | 25.0% |
| ! | GGGGAATTAAAAAATTGTAT+TGG | + | chr4.2:1965400-1965419 | None:intergenic | 25.0% |
| ! | GTTTACATGATAAACTGTTA+GGG | - | chr4.2:1967725-1967744 | MS.gene04780:intron | 25.0% |
| ! | TAAACAAGTGAAAATCAGAA+AGG | + | chr4.2:1968018-1968037 | None:intergenic | 25.0% |
| ! | TAATGTCAAAACCATTACAA+TGG | - | chr4.2:1968679-1968698 | MS.gene04780:intron | 25.0% |
| ! | TATTATAACTACTAATCAGC+AGG | - | chr4.2:1965948-1965967 | MS.gene04780:intron | 25.0% |
| ! | TGAACCAACTAATTAATAGA+GGG | + | chr4.2:1966049-1966068 | None:intergenic | 25.0% |
| ! | TTGAACCAACTAATTAATAG+AGG | + | chr4.2:1966050-1966069 | None:intergenic | 25.0% |
| ! | TTTCAATTTGAACTGTTTCA+CGG | - | chr4.2:1969425-1969444 | MS.gene04780:intron | 25.0% |
| !! | GAGAAGTACATTATTTCAAT+AGG | - | chr4.2:1968884-1968903 | MS.gene04780:intron | 25.0% |
| !! | GATTATTAAGACCTATTTCT+TGG | - | chr4.2:1968974-1968993 | MS.gene04780:intron | 25.0% |
| !! | GTTGGATAAAAATATGGTTT+TGG | - | chr4.2:1965628-1965647 | MS.gene04780:intron | 25.0% |
| !! | GTTTATCCTTCAAATCTTTT+AGG | - | chr4.2:1968155-1968174 | MS.gene04780:intron | 25.0% |
| !! | TAAAGTGAGAACCTTTTTAA+AGG | + | chr4.2:1968826-1968845 | None:intergenic | 25.0% |
| !!! | AAAAAAATGTGCTTTGAAAC+AGG | - | chr4.2:1968214-1968233 | MS.gene04780:intron | 25.0% |
| !!! | ATTTTTCTCTACTTTTGTTG+TGG | - | chr4.2:1967050-1967069 | MS.gene04780:intron | 25.0% |
| !!! | CTGGTTGTAATTTTGATTTT+AGG | - | chr4.2:1964764-1964783 | MS.gene04780:intron | 25.0% |
| !!! | GTAATTTTGATTTTAGGCTA+AGG | - | chr4.2:1964770-1964789 | MS.gene04780:intron | 25.0% |
| !!! | TTATTTTATAAATCTCCCCA+TGG | - | chr4.2:1968470-1968489 | MS.gene04780:intron | 25.0% |
| !!! | TTTCGATTTTGATTTGAATG+AGG | - | chr4.2:1969361-1969380 | MS.gene04780:intron | 25.0% |
| !!! | TTTTTATTTTAACCCCAAAC+TGG | - | chr4.2:1968644-1968663 | MS.gene04780:intron | 25.0% |
| !!! | TTTTTTTTGATTGAATCCGA+TGG | - | chr4.2:1969562-1969581 | MS.gene04780:intron | 25.0% |
| AAAGCAGGAAAATTGAATGA+AGG | + | chr4.2:1966703-1966722 | None:intergenic | 30.0% | |
| AAGAAATAGAAGACATTGGA+AGG | + | chr4.2:1965476-1965495 | None:intergenic | 30.0% | |
| AAGTAATGCTGTATTTGGTT+GGG | - | chr4.2:1969185-1969204 | MS.gene04780:intron | 30.0% | |
| ACAAATGAGTGGAAACAAAA+AGG | + | chr4.2:1969145-1969164 | None:intergenic | 30.0% | |
| ACAATAGTAATTGCCAGTTT+GGG | + | chr4.2:1968660-1968679 | None:intergenic | 30.0% | |
| ACTGTCTTATAGCATATTAG+AGG | + | chr4.2:1966320-1966339 | None:intergenic | 30.0% | |
| ATCCATAGCCATAGTTTAAT+TGG | + | chr4.2:1967612-1967631 | None:intergenic | 30.0% | |
| ATGAGTAGCAATAAAATGGA+TGG | - | chr4.2:1966392-1966411 | MS.gene04780:intron | 30.0% | |
| ATTGAAACTGTAATCTATGC+GGG | - | chr4.2:1968569-1968588 | MS.gene04780:intron | 30.0% | |
| ATTTACTCAATATAGGCCAT+TGG | + | chr4.2:1967987-1968006 | None:intergenic | 30.0% | |
| ATTTCAGAATCCCATAAGAA+GGG | + | chr4.2:1966562-1966581 | None:intergenic | 30.0% | |
| CAAATTTATGCTCAAGATCA+AGG | + | chr4.2:1967648-1967667 | None:intergenic | 30.0% | |
| CATTATTCATATTTCCTCCA+AGG | + | chr4.2:1966427-1966446 | None:intergenic | 30.0% | |
| CGAATAAGTAATGCTGTATT+TGG | - | chr4.2:1969180-1969199 | MS.gene04780:intron | 30.0% | |
| GAATTTCAGTTAAAGTTTGC+TGG | - | chr4.2:1964745-1964764 | MS.gene04780:intron | 30.0% | |
| GATTAGTGGAAGAGTAAAAT+AGG | - | chr4.2:1966351-1966370 | MS.gene04780:CDS | 30.0% | |
| GATTGAAACTGTAATCTATG+CGG | - | chr4.2:1968568-1968587 | MS.gene04780:intron | 30.0% | |
| TAAAAGGAGAGTAGATCATA+CGG | - | chr4.2:1965131-1965150 | MS.gene04780:intron | 30.0% | |
| TAAGTAATGCTGTATTTGGT+TGG | - | chr4.2:1969184-1969203 | MS.gene04780:intron | 30.0% | |
| TACAAGAGAAACTATTGAGA+AGG | - | chr4.2:1965589-1965608 | MS.gene04780:intron | 30.0% | |
| TACAATAGTAATTGCCAGTT+TGG | + | chr4.2:1968661-1968680 | None:intergenic | 30.0% | |
| TAGTTTAATTGGAGACATCA+TGG | + | chr4.2:1967601-1967620 | None:intergenic | 30.0% | |
| TCCTATTCAACAGATAGTTT+GGG | + | chr4.2:1966103-1966122 | None:intergenic | 30.0% | |
| TGATGTCTCCAATTAAACTA+TGG | - | chr4.2:1967601-1967620 | MS.gene04780:intron | 30.0% | |
| TTATACATTCGCCATTGTAA+TGG | + | chr4.2:1968693-1968712 | None:intergenic | 30.0% | |
| TTCAACTTTCGTATTCAAGT+TGG | - | chr4.2:1964862-1964881 | MS.gene04780:intron | 30.0% | |
| TTTCACTTGTTTAACTGACT+TGG | - | chr4.2:1968025-1968044 | MS.gene04780:intron | 30.0% | |
| ! | AACTTTTGCAGAACAGATTT+TGG | + | chr4.2:1966126-1966145 | None:intergenic | 30.0% |
| ! | AGAATCAGATTTTTCCACTT+TGG | + | chr4.2:1968355-1968374 | None:intergenic | 30.0% |
| ! | ATTGTATTGGAAAGGGATTT+TGG | + | chr4.2:1965387-1965406 | None:intergenic | 30.0% |
| ! | ATTTATCTAGCTTGACTACT+TGG | - | chr4.2:1967691-1967710 | MS.gene04780:intron | 30.0% |
| ! | CTGTTTAGTGCTTTTACATT+TGG | - | chr4.2:1967401-1967420 | MS.gene04780:intron | 30.0% |
| ! | GAATCAGATTTTTCCACTTT+GGG | + | chr4.2:1968354-1968373 | None:intergenic | 30.0% |
| ! | GTTTCTCTTGTAGTTTTTCT+AGG | + | chr4.2:1965581-1965600 | None:intergenic | 30.0% |
| ! | TACTAATCTAATGTCACTTC+CGG | - | chr4.2:1969234-1969253 | MS.gene04780:intron | 30.0% |
| ! | TCAACTTTCGTATTCAAGTT+GGG | - | chr4.2:1964863-1964882 | MS.gene04780:intron | 30.0% |
| ! | TGTGGTTGTTTGATTACTTT+TGG | - | chr4.2:1967068-1967087 | MS.gene04780:intron | 30.0% |
| ! | TTGGATTGATTTCAAACCAT+CGG | - | chr4.2:1969468-1969487 | MS.gene04780:CDS | 30.0% |
| ! | TTGTATTGGAAAGGGATTTT+GGG | + | chr4.2:1965386-1965405 | None:intergenic | 30.0% |
| ! | TTTTATTATTGCAAGCCATG+GGG | + | chr4.2:1968488-1968507 | None:intergenic | 30.0% |
| !! | AAATCACTAAGGCTTTGTTT+GGG | - | chr4.2:1965163-1965182 | MS.gene04780:intron | 30.0% |
| !! | GTGGTTGTTTGATTACTTTT+GGG | - | chr4.2:1967069-1967088 | MS.gene04780:intron | 30.0% |
| !! | GTTTTATTATTGCAAGCCAT+GGG | + | chr4.2:1968489-1968508 | None:intergenic | 30.0% |
| !! | TGGTTGTTTGATTACTTTTG+GGG | - | chr4.2:1967070-1967089 | MS.gene04780:intron | 30.0% |
| !! | TGTTTTATTATTGCAAGCCA+TGG | + | chr4.2:1968490-1968509 | None:intergenic | 30.0% |
| !! | TTTGTTTTTCACCTCAATCA+GGG | - | chr4.2:1967338-1967357 | MS.gene04780:intron | 30.0% |
| !! | TTTTTAATTCCCCCAAATGA+GGG | - | chr4.2:1965407-1965426 | MS.gene04780:intron | 30.0% |
| !!! | ATTTTGATTTTAGGCTAAGG+AGG | - | chr4.2:1964773-1964792 | MS.gene04780:intron | 30.0% |
| !!! | TTTTTTAATTCCCCCAAATG+AGG | - | chr4.2:1965406-1965425 | MS.gene04780:intron | 30.0% |
| AAACCTCATCTACAAATGAG+TGG | + | chr4.2:1969156-1969175 | None:intergenic | 35.0% | |
| AAATCCATAAACTAACTCCC+TGG | + | chr4.2:1965994-1966013 | None:intergenic | 35.0% | |
| AACTGAGGCAATCAGTATAA+TGG | + | chr4.2:1966221-1966240 | None:intergenic | 35.0% | |
| AAGCAGATGAAAAGTGATGA+AGG | + | chr4.2:1966819-1966838 | None:intergenic | 35.0% | |
| AAGGTCAACTTCAATCACAA+AGG | + | chr4.2:1967026-1967045 | None:intergenic | 35.0% | |
| AAGTGGAAGATGTTAATGGA+TGG | - | chr4.2:1969619-1969638 | MS.gene04780:CDS | 35.0% | |
| AATACAAAATCCCCCTCATT+TGG | + | chr4.2:1965422-1965441 | None:intergenic | 35.0% | |
| AATACTGATGAAAGATCACC+AGG | - | chr4.2:1965973-1965992 | MS.gene04780:intron | 35.0% | |
| AATATAAAGAATGGCGACAC+TGG | - | chr4.2:1967159-1967178 | MS.gene04780:intron | 35.0% | |
| AATGAGTGGAAACAAAAAGG+AGG | + | chr4.2:1969142-1969161 | None:intergenic | 35.0% | |
| ACAAGTTAAAAGAGGACAAC+TGG | + | chr4.2:1966677-1966696 | None:intergenic | 35.0% | |
| ACGAAAGTGGAAGATGTTAA+TGG | - | chr4.2:1969615-1969634 | MS.gene04780:CDS | 35.0% | |
| AGACTTGTGGATTCTGTAAA+AGG | - | chr4.2:1965115-1965134 | MS.gene04780:intron | 35.0% | |
| AGATGGTAGAAACAAGACTT+AGG | - | chr4.2:1965071-1965090 | MS.gene04780:intron | 35.0% | |
| AGGATGGATGGAGTAAAAAA+TGG | - | chr4.2:1969259-1969278 | MS.gene04780:intron | 35.0% | |
| AGGATGTTATATTGGATGTG+TGG | - | chr4.2:1964988-1965007 | MS.gene04780:intron | 35.0% | |
| AGGCAACCTAAAAGATTTGA+AGG | + | chr4.2:1968164-1968183 | None:intergenic | 35.0% | |
| AGGTCAACTTCAATCACAAA+GGG | + | chr4.2:1967025-1967044 | None:intergenic | 35.0% | |
| ATACAAAATCCCCCTCATTT+GGG | + | chr4.2:1965421-1965440 | None:intergenic | 35.0% | |
| ATACTGATGAAAGATCACCA+GGG | - | chr4.2:1965974-1965993 | MS.gene04780:intron | 35.0% | |
| ATATTGAGTAAATCAGTGGG+TGG | - | chr4.2:1965867-1965886 | MS.gene04780:intron | 35.0% | |
| CAATAGTAATTGCCAGTTTG+GGG | + | chr4.2:1968659-1968678 | None:intergenic | 35.0% | |
| CATTGAAACTACTATTGCCA+AGG | - | chr4.2:1964659-1964678 | MS.gene04780:CDS | 35.0% | |
| CCAACACTAGGATGTTATAT+TGG | - | chr4.2:1964980-1964999 | MS.gene04780:intron | 35.0% | |
| CCAATATAACATCCTAGTGT+TGG | + | chr4.2:1964983-1965002 | None:intergenic | 35.0% | |
| CTATCTACTACTATTACTGC+AGG | - | chr4.2:1968515-1968534 | MS.gene04780:intron | 35.0% | |
| CTCCAATTAAACTATGGCTA+TGG | - | chr4.2:1967607-1967626 | MS.gene04780:intron | 35.0% | |
| CTCTCCCTCTATTAATTAGT+TGG | - | chr4.2:1966042-1966061 | MS.gene04780:intron | 35.0% | |
| CTTAAGTTAACGTTCTAACG+TGG | - | chr4.2:1967116-1967135 | MS.gene04780:intron | 35.0% | |
| GAGGACAATGCTTCTAATAA+TGG | + | chr4.2:1966301-1966320 | None:intergenic | 35.0% | |
| GATTAGAACCAACACTAGAT+GGG | - | chr4.2:1965029-1965048 | MS.gene04780:intron | 35.0% | |
| GATTTCAGAATCCCATAAGA+AGG | + | chr4.2:1966563-1966582 | None:intergenic | 35.0% | |
| GGATCTAGAGATTAATGAGT+TGG | - | chr4.2:1965610-1965629 | MS.gene04780:intron | 35.0% | |
| GGGACTCAACTTCAATATAA+GGG | + | chr4.2:1966083-1966102 | None:intergenic | 35.0% | |
| GTCCTATTCAACAGATAGTT+TGG | + | chr4.2:1966104-1966123 | None:intergenic | 35.0% | |
| GTGGAAGAAATAGAAGACAT+TGG | + | chr4.2:1965480-1965499 | None:intergenic | 35.0% | |
| TAATCCAAAATTCGACCATG+AGG | + | chr4.2:1968959-1968978 | None:intergenic | 35.0% | |
| TAGAAGGGTTGCAGATAATA+TGG | - | chr4.2:1964797-1964816 | MS.gene04780:intron | 35.0% | |
| TCCATACAACATGTCTTAAG+CGG | + | chr4.2:1964937-1964956 | None:intergenic | 35.0% | |
| TCCCAAACTATCTGTTGAAT+AGG | - | chr4.2:1966099-1966118 | MS.gene04780:intron | 35.0% | |
| TCTCACGTATGTATGATTGT+GGG | - | chr4.2:1969105-1969124 | MS.gene04780:intron | 35.0% | |
| TGAAGCAAAAGTGAGTTAGT+GGG | - | chr4.2:1969284-1969303 | MS.gene04780:intron | 35.0% | |
| TGGGACTCAACTTCAATATA+AGG | + | chr4.2:1966084-1966103 | None:intergenic | 35.0% | |
| TTCAAACAAACCAGTGATGT+AGG | + | chr4.2:1967309-1967328 | None:intergenic | 35.0% | |
| TTCTCACGTATGTATGATTG+TGG | - | chr4.2:1969104-1969123 | MS.gene04780:intron | 35.0% | |
| TTCTTTAGTGAACTCAAGCT+GGG | + | chr4.2:1968072-1968091 | None:intergenic | 35.0% | |
| TTGAAGCAAAAGTGAGTTAG+TGG | - | chr4.2:1969283-1969302 | MS.gene04780:intron | 35.0% | |
| TTTAGTAAACTGAAGCACAC+AGG | - | chr4.2:1967245-1967264 | MS.gene04780:intron | 35.0% | |
| TTTCCACTCATTTGTAGATG+AGG | - | chr4.2:1969150-1969169 | MS.gene04780:intron | 35.0% | |
| ! | AAACAAGACTGGTTAGATAG+CGG | - | chr4.2:1968711-1968730 | MS.gene04780:intron | 35.0% |
| ! | AAGACCTATTTCTTGGAAAC+CGG | - | chr4.2:1968981-1969000 | MS.gene04780:intron | 35.0% |
| ! | AAGATGTTAATGGATGGAAC+TGG | - | chr4.2:1969625-1969644 | MS.gene04780:CDS | 35.0% |
| ! | AGATGTTAATGGATGGAACT+GGG | - | chr4.2:1969626-1969645 | MS.gene04780:CDS | 35.0% |
| ! | GATGGTTTGAAATCAATCCA+AGG | + | chr4.2:1969469-1969488 | None:intergenic | 35.0% |
| ! | TCTACCATCTTTTCTACTGT+AGG | + | chr4.2:1965061-1965080 | None:intergenic | 35.0% |
| ! | TGTTTACAGAACTGGCTTAT+CGG | - | chr4.2:1967810-1967829 | MS.gene04780:intron | 35.0% |
| !! | ACTTGTTTAACTGACTTGGT+CGG | - | chr4.2:1968029-1968048 | MS.gene04780:intron | 35.0% |
| !! | CAAATCACTAAGGCTTTGTT+TGG | - | chr4.2:1965162-1965181 | MS.gene04780:intron | 35.0% |
| !! | GTTTGTTTTTCACCTCAATC+AGG | - | chr4.2:1967337-1967356 | MS.gene04780:intron | 35.0% |
| !! | TTGTTTTTCACCTCAATCAG+GGG | - | chr4.2:1967339-1967358 | MS.gene04780:intron | 35.0% |
| !! | TTTTAATTCCCCCAAATGAG+GGG | - | chr4.2:1965408-1965427 | MS.gene04780:intron | 35.0% |
| !!! | TTTTTGTTTTTGCAACCCTC+CGG | + | chr4.2:1969003-1969022 | None:intergenic | 35.0% |
| AAAGCATGTTAACCTGAGCA+TGG | + | chr4.2:1964528-1964547 | None:intergenic | 40.0% | |
| AACTGTAACAAACATGCACG+TGG | + | chr4.2:1967537-1967556 | None:intergenic | 40.0% | |
| AATACGCGAGTAGGAAAAAG+GGG | + | chr4.2:1966514-1966533 | None:intergenic | 40.0% | |
| ACATGTAGAAAGGAGACTTG+TGG | - | chr4.2:1965102-1965121 | MS.gene04780:intron | 40.0% | |
| ACCGCTTAAGACATGTTGTA+TGG | - | chr4.2:1964933-1964952 | MS.gene04780:intron | 40.0% | |
| AGAATGTCCACGTGTCAATA+GGG | + | chr4.2:1966611-1966630 | None:intergenic | 40.0% | |
| AGCACCTACAGTAGAAAAGA+TGG | - | chr4.2:1965054-1965073 | MS.gene04780:intron | 40.0% | |
| AGTAGCCACAGTTCAGAATT+TGG | + | chr4.2:1964588-1964607 | None:intergenic | 40.0% | |
| ATAGAAGACATTGGAAGGAG+AGG | + | chr4.2:1965471-1965490 | None:intergenic | 40.0% | |
| ATATTGATGAAAGACCGCCA+GGG | - | chr4.2:1965890-1965909 | MS.gene04780:intron | 40.0% | |
| ATCGGCACAAATTGAATCCA+TGG | - | chr4.2:1969486-1969505 | MS.gene04780:CDS | 40.0% | |
| ATGGATGGAGATTAACTCCT+TGG | - | chr4.2:1966407-1966426 | MS.gene04780:intron | 40.0% | |
| ATGGATTCAATTTGTGCCGA+TGG | + | chr4.2:1969487-1969506 | None:intergenic | 40.0% | |
| CAATACGCGAGTAGGAAAAA+GGG | + | chr4.2:1966515-1966534 | None:intergenic | 40.0% | |
| CTTCTTTAGTGAACTCAAGC+TGG | + | chr4.2:1968073-1968092 | None:intergenic | 40.0% | |
| GAAACAAGACTTAGGTGGTT+TGG | - | chr4.2:1965079-1965098 | MS.gene04780:intron | 40.0% | |
| GCAGATAATATGGTACAGCT+TGG | - | chr4.2:1964807-1964826 | MS.gene04780:intron | 40.0% | |
| GGATTAGAACCAACACTAGA+TGG | - | chr4.2:1965028-1965047 | MS.gene04780:intron | 40.0% | |
| GGCGAATGTATAAACAAGAC+TGG | - | chr4.2:1968700-1968719 | MS.gene04780:intron | 40.0% | |
| TACAAAATCCCCCTCATTTG+GGG | + | chr4.2:1965420-1965439 | None:intergenic | 40.0% | |
| TACAAGAGAAGGGATAAAGC+AGG | + | chr4.2:1966718-1966737 | None:intergenic | 40.0% | |
| TACTATTACTGCAGGAACTG+AGG | - | chr4.2:1968523-1968542 | MS.gene04780:intron | 40.0% | |
| TAGAAGACATTGGAAGGAGA+GGG | + | chr4.2:1965470-1965489 | None:intergenic | 40.0% | |
| TATGGTACAGCTTGGTAAAG+AGG | - | chr4.2:1964815-1964834 | MS.gene04780:intron | 40.0% | |
| TCACAAGCTGTTTACAGAAC+TGG | - | chr4.2:1967802-1967821 | MS.gene04780:intron | 40.0% | |
| TCAGGCATCTCAAACTATGT+GGG | + | chr4.2:1968442-1968461 | None:intergenic | 40.0% | |
| TCCTTCCAAATTCTGAACTG+TGG | - | chr4.2:1964580-1964599 | MS.gene04780:CDS | 40.0% | |
| TCGGAAAAGGCAATTTCCAT+CGG | + | chr4.2:1969581-1969600 | None:intergenic | 40.0% | |
| TCGGCACAAATTGAATCCAT+GGG | - | chr4.2:1969487-1969506 | MS.gene04780:CDS | 40.0% | |
| TGCAACACTATAACGAACTG+AGG | + | chr4.2:1966236-1966255 | None:intergenic | 40.0% | |
| TGCAGAAAAGGTTGAGAAAC+AGG | + | chr4.2:1967286-1967305 | None:intergenic | 40.0% | |
| TGGTAGAAACAAGACTTAGG+TGG | - | chr4.2:1965074-1965093 | MS.gene04780:intron | 40.0% | |
| TGTTGTATGGAGCAGAATGT+TGG | - | chr4.2:1964946-1964965 | MS.gene04780:intron | 40.0% | |
| TTAACCTGAGCATGGATATC+CGG | + | chr4.2:1964520-1964539 | None:intergenic | 40.0% | |
| TTAGGCTAAGGAGGTTAGAA+GGG | - | chr4.2:1964782-1964801 | MS.gene04780:intron | 40.0% | |
| TTCAGGCATCTCAAACTATG+TGG | + | chr4.2:1968443-1968462 | None:intergenic | 40.0% | |
| TTGATCGCGATAATGAGCTT+AGG | - | chr4.2:1968241-1968260 | MS.gene04780:intron | 40.0% | |
| TTTAATTCCCCCAAATGAGG+GGG | - | chr4.2:1965409-1965428 | MS.gene04780:intron | 40.0% | |
| TTTAGGCTAAGGAGGTTAGA+AGG | - | chr4.2:1964781-1964800 | MS.gene04780:intron | 40.0% | |
| ! | AACAAGACTGGTTAGATAGC+GGG | - | chr4.2:1968712-1968731 | MS.gene04780:intron | 40.0% |
| ! | ATAGAACTGGTGGATACACT+AGG | - | chr4.2:1967925-1967944 | MS.gene04780:intron | 40.0% |
| ! | ATCACCAGGGAGTTAGTTTA+TGG | - | chr4.2:1965987-1966006 | MS.gene04780:intron | 40.0% |
| ! | ATGGCAACTAATGGTGGAAA+AGG | + | chr4.2:1967582-1967601 | None:intergenic | 40.0% |
| ! | CTAACCTCATGGTCGAATTT+TGG | - | chr4.2:1968952-1968971 | MS.gene04780:intron | 40.0% |
| ! | GATGTTAATGGATGGAACTG+GGG | - | chr4.2:1969627-1969646 | MS.gene04780:CDS | 40.0% |
| ! | TAGAACTGGTGGATACACTA+GGG | - | chr4.2:1967926-1967945 | MS.gene04780:intron | 40.0% |
| ! | TCAGATTTTTCCACTTTGGG+AGG | + | chr4.2:1968351-1968370 | None:intergenic | 40.0% |
| ! | TGGCAACTAATGGTGGAAAA+GGG | + | chr4.2:1967581-1967600 | None:intergenic | 40.0% |
| ! | TTATGGATTTTCCGCTAACC+CGG | - | chr4.2:1966004-1966023 | MS.gene04780:intron | 40.0% |
| !! | ACTTTCGTATTCAAGTTGGG+TGG | - | chr4.2:1964866-1964885 | MS.gene04780:intron | 40.0% |
| !! | CTTGGTCGGTTCTGTTATTT+TGG | - | chr4.2:1968043-1968062 | MS.gene04780:intron | 40.0% |
| !! | GAAAGGGATTTTGGGAGTTT+TGG | + | chr4.2:1965378-1965397 | None:intergenic | 40.0% |
| !! | TAAGGCTTTGTTTGGGAGTT+TGG | - | chr4.2:1965170-1965189 | MS.gene04780:intron | 40.0% |
| !! | TCTACCTATGGGCTTTGTTT+GGG | + | chr4.2:1965552-1965571 | None:intergenic | 40.0% |
| !! | TTAGTGGGCTAGTGACTTTA+AGG | - | chr4.2:1969299-1969318 | MS.gene04780:intron | 40.0% |
| !! | TTCAAGTTGGGTGGTTGAAA+TGG | - | chr4.2:1964875-1964894 | MS.gene04780:intron | 40.0% |
| !!! | AAGGGTTTTGGAACAAAGGA+AGG | + | chr4.2:1965508-1965527 | None:intergenic | 40.0% |
| !!! | CTTTTAGGTTGCCTAGACTA+AGG | - | chr4.2:1968170-1968189 | MS.gene04780:intron | 40.0% |
| !!! | TGGTTTTGGATAGAGCACTT+TGG | - | chr4.2:1965642-1965661 | MS.gene04780:intron | 40.0% |
| AAAACGGACAGGAGGATGAT+AGG | + | chr4.2:1966756-1966775 | None:intergenic | 45.0% | |
| AACTCCCAAACAAAGCCCAT+AGG | - | chr4.2:1965545-1965564 | MS.gene04780:intron | 45.0% | |
| AACTGTTTCACGGTTCAGTG+CGG | - | chr4.2:1969435-1969454 | MS.gene04780:intron | 45.0% | |
| AAGGAGAGTAGATCATACGG+AGG | - | chr4.2:1965134-1965153 | MS.gene04780:intron | 45.0% | |
| ACAAAATCCCCCTCATTTGG+GGG | + | chr4.2:1965419-1965438 | None:intergenic | 45.0% | |
| ACAACTGGCTGTGAAAGAAG+TGG | + | chr4.2:1966662-1966681 | None:intergenic | 45.0% | |
| AGAAAGAGAACGCATGCTAG+AGG | - | chr4.2:1969030-1969049 | MS.gene04780:intron | 45.0% | |
| AGAGACAGACAGAGATAAGC+CGG | + | chr4.2:1966026-1966045 | None:intergenic | 45.0% | |
| AGCACACAGGCTTCATAGTT+TGG | - | chr4.2:1967258-1967277 | MS.gene04780:intron | 45.0% | |
| AGCCATATATCCCCTGATTG+AGG | + | chr4.2:1967352-1967371 | None:intergenic | 45.0% | |
| AGGAGAGTAGATCATACGGA+GGG | - | chr4.2:1965135-1965154 | MS.gene04780:intron | 45.0% | |
| ATCAGGGGATATATGGCTTG+TGG | - | chr4.2:1967354-1967373 | MS.gene04780:intron | 45.0% | |
| ATGCTAGAGGTTGCTTGACA+AGG | - | chr4.2:1969043-1969062 | MS.gene04780:intron | 45.0% | |
| ATTCCTTCAGGAAAACGGAC+AGG | + | chr4.2:1966767-1966786 | None:intergenic | 45.0% | |
| CAAACAAAGCCCATAGGTAG+AGG | - | chr4.2:1965551-1965570 | MS.gene04780:intron | 45.0% | |
| CACCTCAATCAGGGGATATA+TGG | - | chr4.2:1967347-1967366 | MS.gene04780:intron | 45.0% | |
| CAGAATCCCATAAGAAGGGA+GGG | + | chr4.2:1966558-1966577 | None:intergenic | 45.0% | |
| CAGAATGTCCACGTGTCAAT+AGG | + | chr4.2:1966612-1966631 | None:intergenic | 45.0% | |
| CAGTGATGTAGGTGCAGAAA+AGG | + | chr4.2:1967298-1967317 | None:intergenic | 45.0% | |
| CCAGGGGCTTAAAACATAGT+CGG | - | chr4.2:1965907-1965926 | MS.gene04780:intron | 45.0% | |
| CTAGGTCTTCCTCTACCTAT+GGG | + | chr4.2:1965563-1965582 | None:intergenic | 45.0% | |
| CTGTTGAGAGTCACAGTTAG+TGG | + | chr4.2:1966458-1966477 | None:intergenic | 45.0% | |
| CTTATCCCACTAAGTGGGAT+CGG | + | chr4.2:1965687-1965706 | None:intergenic | 45.0% | |
| GACATCATGGCAACTAATGG+TGG | + | chr4.2:1967588-1967607 | None:intergenic | 45.0% | |
| GAGGGAGAGAAATGTGTGAA+GGG | + | chr4.2:1966540-1966559 | None:intergenic | 45.0% | |
| GATATTGATGAAAGACCGCC+AGG | - | chr4.2:1965889-1965908 | MS.gene04780:intron | 45.0% | |
| GATGGAGATTAACTCCTTGG+AGG | - | chr4.2:1966410-1966429 | MS.gene04780:intron | 45.0% | |
| GCAATACGCGAGTAGGAAAA+AGG | + | chr4.2:1966516-1966535 | None:intergenic | 45.0% | |
| GCCACAGTTCAGAATTTGGA+AGG | + | chr4.2:1964584-1964603 | None:intergenic | 45.0% | |
| GGAGACATCATGGCAACTAA+TGG | + | chr4.2:1967591-1967610 | None:intergenic | 45.0% | |
| GTAACAAACATGCACGTGGA+AGG | + | chr4.2:1967533-1967552 | None:intergenic | 45.0% | |
| GTATGGAGCAGAATGTTGGA+CGG | - | chr4.2:1964950-1964969 | MS.gene04780:intron | 45.0% | |
| GTGGTAAGACAAGACGTGAT+AGG | - | chr4.2:1965007-1965026 | MS.gene04780:intron | 45.0% | |
| GTGTTGTGCAGAGATAGAAC+TGG | - | chr4.2:1967912-1967931 | MS.gene04780:intron | 45.0% | |
| TATTGATGAAAGACCGCCAG+GGG | - | chr4.2:1965891-1965910 | MS.gene04780:intron | 45.0% | |
| TCAGAATCCCATAAGAAGGG+AGG | + | chr4.2:1966559-1966578 | None:intergenic | 45.0% | |
| TCGATTCAGCTTCCTGAACT+TGG | + | chr4.2:1964486-1964505 | None:intergenic | 45.0% | |
| TCTAGGTCTTCCTCTACCTA+TGG | + | chr4.2:1965564-1965583 | None:intergenic | 45.0% | |
| TGAATCGAGAAACGTCTCAC+CGG | - | chr4.2:1964498-1964517 | MS.gene04780:CDS | 45.0% | |
| TGAGCTCTCTCACATCAGTA+GGG | + | chr4.2:1966487-1966506 | None:intergenic | 45.0% | |
| TTCTCTCCCTCCCTTCTTAT+GGG | - | chr4.2:1966549-1966568 | MS.gene04780:intron | 45.0% | |
| TTGTGCAGAGATAGAACTGG+TGG | - | chr4.2:1967915-1967934 | MS.gene04780:intron | 45.0% | |
| TTTACTCCATCCATCCTGTC+CGG | + | chr4.2:1969256-1969275 | None:intergenic | 45.0% | |
| TTTCTCTCCCTCCCTTCTTA+TGG | - | chr4.2:1966548-1966567 | MS.gene04780:intron | 45.0% | |
| ! | ACAAGACTGGTTAGATAGCG+GGG | - | chr4.2:1968713-1968732 | MS.gene04780:intron | 45.0% |
| ! | ACCTATTTCTTGGAAACCGG+AGG | - | chr4.2:1968984-1969003 | MS.gene04780:intron | 45.0% |
| ! | ATCTAATGTCACTTCCGGAC+AGG | - | chr4.2:1969239-1969258 | MS.gene04780:intron | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr4.2:1965692-1965711 | None:intergenic | 45.0% |
| ! | CCTATTTCTTGGAAACCGGA+GGG | - | chr4.2:1968985-1969004 | MS.gene04780:intron | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | - | chr4.2:1965175-1965194 | MS.gene04780:intron | 45.0% |
| ! | CTTTTCTGCACCTACATCAC+TGG | - | chr4.2:1967296-1967315 | MS.gene04780:intron | 45.0% |
| ! | GAAGGCGCACAAGTTAAAAG+AGG | + | chr4.2:1966685-1966704 | None:intergenic | 45.0% |
| ! | GGATGAATGTGTTGCTGAAG+CGG | + | chr4.2:1966641-1966660 | None:intergenic | 45.0% |
| ! | GGTGGTTTGGACATGTAGAA+AGG | - | chr4.2:1965092-1965111 | MS.gene04780:intron | 45.0% |
| ! | TCAGGGGATATATGGCTTGT+GGG | - | chr4.2:1967355-1967374 | MS.gene04780:intron | 45.0% |
| !! | ACTATGTTTTAAGCCCCTGG+CGG | + | chr4.2:1965907-1965926 | None:intergenic | 45.0% |
| !! | AGGGATTTTGGGAGTTTTGG+AGG | + | chr4.2:1965375-1965394 | None:intergenic | 45.0% |
| !! | ATGGGCTTTGTTTGGGAGTT+CGG | + | chr4.2:1965545-1965564 | None:intergenic | 45.0% |
| !! | CTCTACCTATGGGCTTTGTT+TGG | + | chr4.2:1965553-1965572 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | - | chr4.2:1965174-1965193 | MS.gene04780:intron | 45.0% |
| !!! | AGGGAAGGGTTTTGGAACAA+AGG | + | chr4.2:1965512-1965531 | None:intergenic | 45.0% |
| AGATCGTGTCCAGGGATCAA+GGG | + | chr4.2:1968307-1968326 | None:intergenic | 50.0% | |
| CATTGGAAGGAGAGGGCTTT+AGG | + | chr4.2:1965463-1965482 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr4.2:1965690-1965709 | MS.gene04780:intron | 50.0% | |
| CCCTCCGGTTTCCAAGAAAT+AGG | + | chr4.2:1968988-1969007 | None:intergenic | 50.0% | |
| CGATCCCACTTAGTGGGATA+AGG | - | chr4.2:1965685-1965704 | MS.gene04780:intron | 50.0% | |
| CTTAGTGGGATAAGGCTTGG+TGG | - | chr4.2:1965693-1965712 | MS.gene04780:intron | 50.0% | |
| GAACTGGGGACGATGAATGA+AGG | - | chr4.2:1969641-1969660 | MS.gene04780:CDS | 50.0% | |
| GACGGTGAAGAACCAACACT+AGG | - | chr4.2:1964968-1964987 | MS.gene04780:intron | 50.0% | |
| GAGACAGACAGAGATAAGCC+GGG | + | chr4.2:1966025-1966044 | None:intergenic | 50.0% | |
| GCCTTTCTTGACGTCGGAAA+AGG | + | chr4.2:1969594-1969613 | None:intergenic | 50.0% | |
| GGAACAAAGGAAGGAGCAAG+TGG | + | chr4.2:1965499-1965518 | None:intergenic | 50.0% | |
| GGAGGGAGAGAAATGTGTGA+AGG | + | chr4.2:1966541-1966560 | None:intergenic | 50.0% | |
| GTAAGACGAGATCGTGTCCA+GGG | + | chr4.2:1968315-1968334 | None:intergenic | 50.0% | |
| GTCAAGAAAGGCGACGAAAG+TGG | - | chr4.2:1969602-1969621 | MS.gene04780:intron | 50.0% | |
| GTGAGCTCTCTCACATCAGT+AGG | + | chr4.2:1966488-1966507 | None:intergenic | 50.0% | |
| GTGTTGGAGGATCATGATGG+GGG | + | chr4.2:1966589-1966608 | None:intergenic | 50.0% | |
| TAGAACCATGGTCTCGCAGT+TGG | - | chr4.2:1964623-1964642 | MS.gene04780:CDS | 50.0% | |
| TCCAACACCCTATTGACACG+TGG | - | chr4.2:1966601-1966620 | MS.gene04780:intron | 50.0% | |
| TCCACGTGTCAATAGGGTGT+TGG | + | chr4.2:1966605-1966624 | None:intergenic | 50.0% | |
| TGGAAAAGGGCAACTGTGTC+AGG | + | chr4.2:1967568-1967587 | None:intergenic | 50.0% | |
| TGTAGCCGATCCCACTTAGT+GGG | - | chr4.2:1965679-1965698 | MS.gene04780:intron | 50.0% | |
| TTATGCACGTGCAGAGTGAC+AGG | - | chr4.2:1969066-1969085 | MS.gene04780:intron | 50.0% | |
| TTCGTCGCCTTTCTTGACGT+CGG | + | chr4.2:1969600-1969619 | None:intergenic | 50.0% | |
| TTGTAGCCGATCCCACTTAG+TGG | - | chr4.2:1965678-1965697 | MS.gene04780:intron | 50.0% | |
| ! | AATGTCACTTCCGGACAGGA+TGG | - | chr4.2:1969243-1969262 | MS.gene04780:intron | 50.0% |
| ! | ACAGAGATAAGCCGGGTTAG+CGG | + | chr4.2:1966018-1966037 | None:intergenic | 50.0% |
| ! | AGGGGATATATGGCTTGTGG+GGG | - | chr4.2:1967357-1967376 | MS.gene04780:intron | 50.0% |
| ! | CAGGGGATATATGGCTTGTG+GGG | - | chr4.2:1967356-1967375 | MS.gene04780:intron | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr4.2:1965693-1965712 | None:intergenic | 50.0% |
| ! | CTTTGTTTGGGAGTTCGGAG+GGG | + | chr4.2:1965540-1965559 | None:intergenic | 50.0% |
| ! | GCCTTTTCCGACGTCAAGAA+AGG | - | chr4.2:1969590-1969609 | MS.gene04780:intron | 50.0% |
| ! | GGTGCTATCCCATCTAGTGT+TGG | + | chr4.2:1965040-1965059 | None:intergenic | 50.0% |
| ! | GGTGTTGGAGGATCATGATG+GGG | + | chr4.2:1966590-1966609 | None:intergenic | 50.0% |
| ! | GTCCGAAATGACGGGATCTA+CGG | + | chr4.2:1969518-1969537 | None:intergenic | 50.0% |
| ! | GTGGATACACTAGGGTGCTA+CGG | - | chr4.2:1967934-1967953 | MS.gene04780:intron | 50.0% |
| !! | ACGTGTCAATAGGGTGTTGG+AGG | + | chr4.2:1966602-1966621 | None:intergenic | 50.0% |
| !! | AGGGTGTTGGAGGATCATGA+TGG | + | chr4.2:1966592-1966611 | None:intergenic | 50.0% |
| !! | AGTTGGTGATGCTGCACCAA+TGG | - | chr4.2:1967968-1967987 | MS.gene04780:intron | 50.0% |
| !! | CCGACTATGTTTTAAGCCCC+TGG | + | chr4.2:1965910-1965929 | None:intergenic | 50.0% |
| !! | GCTTTGTTTGGGAGTTCGGA+GGG | + | chr4.2:1965541-1965560 | None:intergenic | 50.0% |
| !! | GGAGGGCACTCAAATCACTA+AGG | - | chr4.2:1965152-1965171 | MS.gene04780:intron | 50.0% |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | - | chr4.2:1965173-1965192 | MS.gene04780:intron | 50.0% |
| !! | GGGTGTTGGAGGATCATGAT+GGG | + | chr4.2:1966591-1966610 | None:intergenic | 50.0% |
| ACCGCTGTGTCCGAAATGAC+GGG | + | chr4.2:1969526-1969545 | None:intergenic | 55.0% | |
| AGCACGCCTTGCAGCACATA+CGG | + | chr4.2:1967753-1967772 | None:intergenic | 55.0% | |
| AGGGATCCGTATGTGCTGCA+AGG | - | chr4.2:1967744-1967763 | MS.gene04780:intron | 55.0% | |
| CACCGCTGTGTCCGAAATGA+CGG | + | chr4.2:1969527-1969546 | None:intergenic | 55.0% | |
| CCTTCAGGAAAACGGACAGG+AGG | + | chr4.2:1966764-1966783 | None:intergenic | 55.0% | |
| CGCCGTAGATCCCGTCATTT+CGG | - | chr4.2:1969513-1969532 | MS.gene04780:intron | 55.0% | |
| CTACGGACTCGCATTCGAGT+TGG | - | chr4.2:1967951-1967970 | MS.gene04780:intron | 55.0% | |
| CTCACCGGATATCCATGCTC+AGG | - | chr4.2:1964513-1964532 | MS.gene04780:CDS | 55.0% | |
| GAAGGGAGCAATACGCGAGT+AGG | + | chr4.2:1966523-1966542 | None:intergenic | 55.0% | |
| GAGATCGTGTCCAGGGATCA+AGG | + | chr4.2:1968308-1968327 | None:intergenic | 55.0% | |
| GATCGTGTCCAGGGATCAAG+GGG | + | chr4.2:1968306-1968325 | None:intergenic | 55.0% | |
| GGACACGATCTCGTCTTACC+AGG | - | chr4.2:1968316-1968335 | MS.gene04780:intron | 55.0% | |
| GGTAAGACGAGATCGTGTCC+AGG | + | chr4.2:1968316-1968335 | None:intergenic | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+GGG | - | chr4.2:1965179-1965198 | MS.gene04780:intron | 55.0% | |
| TCACTTCCGGACAGGATGGA+TGG | - | chr4.2:1969247-1969266 | MS.gene04780:intron | 55.0% | |
| TCCCGTCATTTCGGACACAG+CGG | - | chr4.2:1969522-1969541 | MS.gene04780:intron | 55.0% | |
| TGTTTGGGAGTTTGGAGGGG+AGG | - | chr4.2:1965178-1965197 | MS.gene04780:intron | 55.0% | |
| TTTGGGAGGAGCAAACTGCC+TGG | + | chr4.2:1968337-1968356 | None:intergenic | 55.0% | |
| TTTGGGAGTTTGGAGGGGAG+GGG | - | chr4.2:1965180-1965199 | MS.gene04780:intron | 55.0% | |
| ! | CCTCCTGTCCGTTTTCCTGA+AGG | - | chr4.2:1966761-1966780 | MS.gene04780:intron | 55.0% |
| ! | CGAAATGACGGGATCTACGG+CGG | + | chr4.2:1969515-1969534 | None:intergenic | 55.0% |
| ! | GCAGTTTGCTCCTCCCAAAG+TGG | - | chr4.2:1968338-1968357 | MS.gene04780:intron | 55.0% |
| !! | AGGGGAAGGGAGGGTTTTAG+AGG | - | chr4.2:1965198-1965217 | MS.gene04780:intron | 55.0% |
| !! | GGCTTTGTTTGGGAGTTCGG+AGG | + | chr4.2:1965542-1965561 | None:intergenic | 55.0% |
| !!! | GGGGAAGGGAGGGTTTTAGA+GGG | - | chr4.2:1965199-1965218 | MS.gene04780:intron | 55.0% |
| CCTCACCAACTGCGAGACCA+TGG | + | chr4.2:1964631-1964650 | None:intergenic | 60.0% | |
| CTCTGCGGTGGTTGAGGAGT+TGG | + | chr4.2:1968279-1968298 | None:intergenic | 60.0% | |
| GAGTTTGGAGGGGAGGGGAA+GGG | - | chr4.2:1965185-1965204 | MS.gene04780:intron | 60.0% | |
| GTTTGGGAGTTCGGAGGGGA+GGG | + | chr4.2:1965536-1965555 | None:intergenic | 60.0% | |
| TGCGGTGGTTGAGGAGTTGG+TGG | + | chr4.2:1968276-1968295 | None:intergenic | 60.0% | |
| TGTTTGGGAGTTCGGAGGGG+AGG | + | chr4.2:1965537-1965556 | None:intergenic | 60.0% | |
| ! | CCATGGTCTCGCAGTTGGTG+AGG | - | chr4.2:1964628-1964647 | MS.gene04780:CDS | 60.0% |
| ! | CGTGCTGCTAGTTTCGTGCG+AGG | - | chr4.2:1967767-1967786 | MS.gene04780:intron | 60.0% |
| ! | GGGAGGGAAGGGAAGGGTTT+TGG | + | chr4.2:1965520-1965539 | None:intergenic | 60.0% |
| !! | AGAGAGCACCCCTTGATCCC+TGG | - | chr4.2:1968295-1968314 | MS.gene04780:intron | 60.0% |
| !! | GGATCAAGGGGTGCTCTCTG+CGG | + | chr4.2:1968294-1968313 | None:intergenic | 60.0% |
| GGAGTTCGGAGGGGAGGGAA+GGG | + | chr4.2:1965531-1965550 | None:intergenic | 65.0% | |
| GGAGTTTGGAGGGGAGGGGA+AGG | - | chr4.2:1965184-1965203 | MS.gene04780:intron | 65.0% | |
| GGGATCTACGGCGGTTCCCA+TGG | + | chr4.2:1969506-1969525 | None:intergenic | 65.0% | |
| GGTGCTCTCTGCGGTGGTTG+AGG | + | chr4.2:1968285-1968304 | None:intergenic | 65.0% | |
| TCAGTGCGGCGACGCTTCCT+TGG | - | chr4.2:1969449-1969468 | MS.gene04780:intron | 65.0% | |
| TCGGAGGGGAGGGAAGGGAA+GGG | + | chr4.2:1965526-1965545 | None:intergenic | 65.0% | |
| TTCGGAGGGGAGGGAAGGGA+AGG | + | chr4.2:1965527-1965546 | None:intergenic | 65.0% | |
| TTGGAGGGGAGGGGAAGGGA+GGG | - | chr4.2:1965189-1965208 | MS.gene04780:intron | 65.0% | |
| TTTGGAGGGGAGGGGAAGGG+AGG | - | chr4.2:1965188-1965207 | MS.gene04780:intron | 65.0% | |
| !! | TCAAGGGGTGCTCTCTGCGG+TGG | + | chr4.2:1968291-1968310 | None:intergenic | 65.0% |
| GGGAGTTCGGAGGGGAGGGA+AGG | + | chr4.2:1965532-1965551 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 1964479 | 1969660 | 1964479 | ID=MS.gene04780 |
| chr4.2 | mRNA | 1964479 | 1969660 | 1964479 | ID=MS.gene04780.t1;Parent=MS.gene04780 |
| chr4.2 | exon | 1969605 | 1969660 | 1969605 | ID=MS.gene04780.t1.exon1;Parent=MS.gene04780.t1 |
| chr4.2 | CDS | 1969605 | 1969660 | 1969605 | ID=cds.MS.gene04780.t1;Parent=MS.gene04780.t1 |
| chr4.2 | exon | 1969459 | 1969513 | 1969459 | ID=MS.gene04780.t1.exon2;Parent=MS.gene04780.t1 |
| chr4.2 | CDS | 1969459 | 1969513 | 1969459 | ID=cds.MS.gene04780.t1;Parent=MS.gene04780.t1 |
| chr4.2 | exon | 1969303 | 1969353 | 1969303 | ID=MS.gene04780.t1.exon3;Parent=MS.gene04780.t1 |
| chr4.2 | CDS | 1969303 | 1969353 | 1969303 | ID=cds.MS.gene04780.t1;Parent=MS.gene04780.t1 |
| chr4.2 | exon | 1966302 | 1966393 | 1966302 | ID=MS.gene04780.t1.exon4;Parent=MS.gene04780.t1 |
| chr4.2 | CDS | 1966302 | 1966393 | 1966302 | ID=cds.MS.gene04780.t1;Parent=MS.gene04780.t1 |
| chr4.2 | exon | 1966139 | 1966216 | 1966139 | ID=MS.gene04780.t1.exon5;Parent=MS.gene04780.t1 |
| chr4.2 | CDS | 1966139 | 1966216 | 1966139 | ID=cds.MS.gene04780.t1;Parent=MS.gene04780.t1 |
| chr4.2 | exon | 1964479 | 1964686 | 1964479 | ID=MS.gene04780.t1.exon6;Parent=MS.gene04780.t1 |
| chr4.2 | CDS | 1964479 | 1964686 | 1964479 | ID=cds.MS.gene04780.t1;Parent=MS.gene04780.t1 |
| Gene Sequence |
| Protein sequence |
