Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93202.t1 | XP_024628991.1 | 99.3 | 566 | 4 | 0 | 1 | 566 | 194 | 759 | 0.00E+00 | 1106.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93202.t1 | F4I3P9 | 80.2 | 562 | 99 | 4 | 12 | 566 | 216 | 772 | 2.2e-259 | 896.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93202.t1 | A0A396GQN9 | 99.3 | 566 | 4 | 0 | 1 | 566 | 194 | 759 | 0.0e+00 | 1106.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049230 | MS.gene93202 | 0.815011 | 1.15E-51 | -1.69E-46 |
| MS.gene049293 | MS.gene93202 | -0.807383 | 5.19E-50 | -1.69E-46 |
| MS.gene049297 | MS.gene93202 | 0.880079 | 7.37E-70 | -1.69E-46 |
| MS.gene049322 | MS.gene93202 | 0.823729 | 1.18E-53 | -1.69E-46 |
| MS.gene049378 | MS.gene93202 | 0.847494 | 1.12E-59 | -1.69E-46 |
| MS.gene04987 | MS.gene93202 | 0.824243 | 8.97E-54 | -1.69E-46 |
| MS.gene04988 | MS.gene93202 | 0.815157 | 1.07E-51 | -1.69E-46 |
| MS.gene050226 | MS.gene93202 | 0.859347 | 4.40E-63 | -1.69E-46 |
| MS.gene050227 | MS.gene93202 | 0.87117 | 8.38E-67 | -1.69E-46 |
| MS.gene050228 | MS.gene93202 | 0.87194 | 4.66E-67 | -1.69E-46 |
| MS.gene050277 | MS.gene93202 | 0.805607 | 1.23E-49 | -1.69E-46 |
| MS.gene050303 | MS.gene93202 | 0.843285 | 1.54E-58 | -1.69E-46 |
| MS.gene050330 | MS.gene93202 | -0.825479 | 4.58E-54 | -1.69E-46 |
| MS.gene050623 | MS.gene93202 | -0.886937 | 2.21E-72 | -1.69E-46 |
| MS.gene050642 | MS.gene93202 | 0.913205 | 8.06E-84 | -1.69E-46 |
| MS.gene050987 | MS.gene93202 | 0.807286 | 5.44E-50 | -1.69E-46 |
| MS.gene051240 | MS.gene93202 | 0.803342 | 3.65E-49 | -1.69E-46 |
| MS.gene051257 | MS.gene93202 | 0.816488 | 5.39E-52 | -1.69E-46 |
| MS.gene051349 | MS.gene93202 | 0.801901 | 7.24E-49 | -1.69E-46 |
| MS.gene051451 | MS.gene93202 | 0.805596 | 1.24E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene93202 | 0.818943 | 1.51E-52 | -1.69E-46 |
| MS.gene051662 | MS.gene93202 | 0.842307 | 2.80E-58 | -1.69E-46 |
| MS.gene051663 | MS.gene93202 | 0.8159 | 7.29E-52 | -1.69E-46 |
| MS.gene051983 | MS.gene93202 | 0.870972 | 9.74E-67 | -1.69E-46 |
| MS.gene052176 | MS.gene93202 | 0.898139 | 7.11E-77 | -1.69E-46 |
| MS.gene052286 | MS.gene93202 | 0.807695 | 4.46E-50 | -1.69E-46 |
| MS.gene052302 | MS.gene93202 | 0.86212 | 6.34E-64 | -1.69E-46 |
| MS.gene052309 | MS.gene93202 | -0.872865 | 2.29E-67 | -1.69E-46 |
| MS.gene052376 | MS.gene93202 | 0.869821 | 2.32E-66 | -1.69E-46 |
| MS.gene052389 | MS.gene93202 | 0.831055 | 2.07E-55 | -1.69E-46 |
| MS.gene052600 | MS.gene93202 | 0.911152 | 8.40E-83 | -1.69E-46 |
| MS.gene052856 | MS.gene93202 | 0.815909 | 7.26E-52 | -1.69E-46 |
| MS.gene052858 | MS.gene93202 | 0.824111 | 9.63E-54 | -1.69E-46 |
| MS.gene052860 | MS.gene93202 | 0.823284 | 1.50E-53 | -1.69E-46 |
| MS.gene053080 | MS.gene93202 | 0.815766 | 7.81E-52 | -1.69E-46 |
| MS.gene053188 | MS.gene93202 | 0.817323 | 3.50E-52 | -1.69E-46 |
| MS.gene053216 | MS.gene93202 | 0.809192 | 2.14E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene93202 | 0.829095 | 6.23E-55 | -1.69E-46 |
| MS.gene053907 | MS.gene93202 | 0.801133 | 1.04E-48 | -1.69E-46 |
| MS.gene054537 | MS.gene93202 | 0.826588 | 2.50E-54 | -1.69E-46 |
| MS.gene054701 | MS.gene93202 | 0.822303 | 2.55E-53 | -1.69E-46 |
| MS.gene054930 | MS.gene93202 | 0.830147 | 3.46E-55 | -1.69E-46 |
| MS.gene054942 | MS.gene93202 | 0.883389 | 4.68E-71 | -1.69E-46 |
| MS.gene055441 | MS.gene93202 | 0.811043 | 8.53E-51 | -1.69E-46 |
| MS.gene056087 | MS.gene93202 | 0.812486 | 4.14E-51 | -1.69E-46 |
| MS.gene056403 | MS.gene93202 | 0.810208 | 1.29E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene93202 | 0.802524 | 5.38E-49 | -1.69E-46 |
| MS.gene056552 | MS.gene93202 | 0.801899 | 7.24E-49 | -1.69E-46 |
| MS.gene056605 | MS.gene93202 | 0.81335 | 2.68E-51 | -1.69E-46 |
| MS.gene056979 | MS.gene93202 | 0.864487 | 1.17E-64 | -1.69E-46 |
| MS.gene057060 | MS.gene93202 | 0.802309 | 5.97E-49 | -1.69E-46 |
| MS.gene057079 | MS.gene93202 | 0.838917 | 2.16E-57 | -1.69E-46 |
| MS.gene057121 | MS.gene93202 | 0.806004 | 1.02E-49 | -1.69E-46 |
| MS.gene057555 | MS.gene93202 | 0.819999 | 8.65E-53 | -1.69E-46 |
| MS.gene057967 | MS.gene93202 | 0.813187 | 2.91E-51 | -1.69E-46 |
| MS.gene058142 | MS.gene93202 | 0.83518 | 1.95E-56 | -1.69E-46 |
| MS.gene058200 | MS.gene93202 | 0.817691 | 2.89E-52 | -1.69E-46 |
| MS.gene058201 | MS.gene93202 | 0.825842 | 3.76E-54 | -1.69E-46 |
| MS.gene058238 | MS.gene93202 | 0.823047 | 1.71E-53 | -1.69E-46 |
| MS.gene058399 | MS.gene93202 | 0.816354 | 5.78E-52 | -1.69E-46 |
| MS.gene058749 | MS.gene93202 | 0.82604 | 3.37E-54 | -1.69E-46 |
| MS.gene058833 | MS.gene93202 | 0.851636 | 7.80E-61 | -1.69E-46 |
| MS.gene059247 | MS.gene93202 | 0.828546 | 8.47E-55 | -1.69E-46 |
| MS.gene059569 | MS.gene93202 | 0.811278 | 7.58E-51 | -1.69E-46 |
| MS.gene059710 | MS.gene93202 | 0.801821 | 7.52E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene93202 | 0.812099 | 5.03E-51 | -1.69E-46 |
| MS.gene059899 | MS.gene93202 | 0.8116 | 6.46E-51 | -1.69E-46 |
| MS.gene060084 | MS.gene93202 | 0.801863 | 7.37E-49 | -1.69E-46 |
| MS.gene060165 | MS.gene93202 | 0.814516 | 1.48E-51 | -1.69E-46 |
| MS.gene060297 | MS.gene93202 | 0.866612 | 2.51E-65 | -1.69E-46 |
| MS.gene060619 | MS.gene93202 | 0.815758 | 7.85E-52 | -1.69E-46 |
| MS.gene060879 | MS.gene93202 | 0.812006 | 5.27E-51 | -1.69E-46 |
| MS.gene061040 | MS.gene93202 | -0.832779 | 7.78E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 142 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGAATTCAACATGATTCT+AGG | 0.209520 | 4.2:-6376104 | MS.gene93202:CDS |
| AATCAGTTGGATTCGTCTTA+TGG | 0.216741 | 4.2:-6375730 | MS.gene93202:CDS |
| TGGGGTTCTGGATGCTGTTT+TGG | 0.247514 | 4.2:-6375710 | MS.gene93202:CDS |
| CTTCTATTTGATATGTTTCA+TGG | 0.262320 | 4.2:+6373286 | None:intergenic |
| CATTGCTGTTGGGGCACCCT+TGG | 0.269688 | 4.2:-6375239 | MS.gene93202:CDS |
| GATGAGTTTAGCTGAGCTTT+TGG | 0.274198 | 4.2:-6376181 | MS.gene93202:CDS |
| GAAGAGGTTGATGCAGTTCC+TGG | 0.277253 | 4.2:-6375196 | MS.gene93202:CDS |
| CTGTTGCTATCTTTGTCATC+AGG | 0.281451 | 4.2:+6374813 | None:intergenic |
| AATTTGGAAGTTGAAATTAA+TGG | 0.284196 | 4.2:-6376123 | MS.gene93202:CDS |
| TGTTTCGGTTTACGGGAATT+TGG | 0.293661 | 4.2:-6376139 | MS.gene93202:CDS |
| TCAAATAGAAGGTGAGAAAA+AGG | 0.297061 | 4.2:-6373274 | MS.gene93202:CDS |
| TGGCAGTTGGCATTGCTGTT+GGG | 0.297200 | 4.2:-6375249 | MS.gene93202:CDS |
| ATTGATATTGAAGATACTTT+AGG | 0.316478 | 4.2:-6375967 | MS.gene93202:CDS |
| ATGCAAGAGTATCTGAAATA+TGG | 0.320054 | 4.2:-6374547 | MS.gene93202:CDS |
| TGCGCCTTTGTTCGTTTCAA+TGG | 0.326884 | 4.2:-6375452 | MS.gene93202:CDS |
| GTGGTTCCTGTTTCGGTTTA+CGG | 0.327895 | 4.2:-6376147 | MS.gene93202:CDS |
| TACTTTAGGTTGTAAGGCTT+TGG | 0.331424 | 4.2:-6375953 | MS.gene93202:CDS |
| GATTCTAGGCTTGTTACTTC+TGG | 0.335990 | 4.2:-6376090 | MS.gene93202:CDS |
| TAATACACCTGCTGGGATAC+TGG | 0.337449 | 4.2:-6375326 | MS.gene93202:CDS |
| TGAAGATACTTTAGGTTGTA+AGG | 0.337482 | 4.2:-6375959 | MS.gene93202:CDS |
| TGGTTCCTGTTTCGGTTTAC+GGG | 0.342723 | 4.2:-6376146 | MS.gene93202:CDS |
| GCGCCTTTGTTCGTTTCAAT+GGG | 0.352036 | 4.2:-6375451 | MS.gene93202:CDS |
| GAGTAAAGTGGTTCCTGTTT+CGG | 0.355296 | 4.2:-6376154 | MS.gene93202:CDS |
| ATGGCTCTTATTGGGATAAC+GGG | 0.357306 | 4.2:-6375859 | MS.gene93202:CDS |
| ATCAGTTGGATTCGTCTTAT+GGG | 0.358561 | 4.2:-6375729 | MS.gene93202:CDS |
| GGATTCGTCTTATGGGGTTC+TGG | 0.360276 | 4.2:-6375722 | MS.gene93202:CDS |
| TTCTTCGCGCGGATTGGCTC+AGG | 0.360852 | 4.2:-6375629 | MS.gene93202:CDS |
| TTGACGAGGAACAAGCATTT+GGG | 0.363745 | 4.2:-6375159 | MS.gene93202:CDS |
| ATTGGGATAACGGGGACTTA+TGG | 0.366671 | 4.2:-6375850 | MS.gene93202:CDS |
| ATTGACGAGGAACAAGCATT+TGG | 0.368221 | 4.2:-6375160 | MS.gene93202:CDS |
| GCTAAACTCATCTTAAACTT+AGG | 0.371166 | 4.2:+6376192 | None:intergenic |
| CCCTTGGAGGATATTGTTAG+AGG | 0.378411 | 4.2:-6375223 | MS.gene93202:CDS |
| GTGGCAGTTGGCATTGCTGT+TGG | 0.380126 | 4.2:-6375250 | MS.gene93202:CDS |
| TGAGGCTTCTTCGCGCGGAT+TGG | 0.380295 | 4.2:-6375635 | MS.gene93202:CDS |
| AAGCCTCCCTGCACTCTTCT+CGG | 0.384444 | 4.2:+6373238 | None:intergenic |
| ATGGCTAAGATGCTTCATAA+TGG | 0.390726 | 4.2:-6375676 | MS.gene93202:CDS |
| ATCTTCACCCTTGGGGTTGT+CGG | 0.392594 | 4.2:+6374763 | None:intergenic |
| TGCTGTTGGGGCACCCTTGG+AGG | 0.395991 | 4.2:-6375236 | MS.gene93202:CDS |
| CATGAAACATATCAAATAGA+AGG | 0.403779 | 4.2:-6373285 | MS.gene93202:CDS |
| ATCTAAATCAAAGGAAGATT+CGG | 0.408810 | 4.2:+6376257 | None:intergenic |
| AATGTCACAACAGGAACTTC+AGG | 0.413089 | 4.2:+6375424 | None:intergenic |
| AAATTCCCGTAAACCGAAAC+AGG | 0.415050 | 4.2:+6376141 | None:intergenic |
| CAAAGAGAGTTCAAACTTCA+AGG | 0.427492 | 4.2:+6375369 | None:intergenic |
| CAACCTCGCAGGATTATAAC+TGG | 0.428629 | 4.2:-6375070 | MS.gene93202:intron |
| GAAATTTCGTCCGGTTTACT+AGG | 0.429518 | 4.2:-6375304 | MS.gene93202:CDS |
| CTTTGGTATCAGTGGCTCTC+TGG | 0.432741 | 4.2:+6372999 | None:intergenic |
| GGATGAGGAGGACGAGGAAG+AGG | 0.435631 | 4.2:-6375557 | MS.gene93202:CDS |
| TCGATTGCTAGTTATGTTCA+TGG | 0.437145 | 4.2:-6375757 | MS.gene93202:CDS |
| ATACATGGATCTTCACCCTT+GGG | 0.437950 | 4.2:+6374755 | None:intergenic |
| TGTTGCTATCTTTGTCATCA+GGG | 0.440012 | 4.2:+6374814 | None:intergenic |
| TGCATGGTGCAGGTGATTGC+TGG | 0.441426 | 4.2:-6373315 | MS.gene93202:intron |
| GTGCGAGCTTCAGTTGCAAT+GGG | 0.443311 | 4.2:-6374454 | MS.gene93202:CDS |
| CATGGCTCTTATTGGGATAA+CGG | 0.454105 | 4.2:-6375860 | MS.gene93202:CDS |
| TTGTAAGGCTTTGGTTATTG+TGG | 0.454945 | 4.2:-6375944 | MS.gene93202:CDS |
| AATTTGTTTGTGTGTTGTGT+TGG | 0.460206 | 4.2:-6376066 | MS.gene93202:CDS |
| ATTCTTGCTGCTGTGGCAGT+TGG | 0.464613 | 4.2:-6375262 | MS.gene93202:CDS |
| TAAAAGTATGTATGAAGCGA+TGG | 0.466444 | 4.2:-6375803 | MS.gene93202:CDS |
| ACAACTTTCCTATGCCGCTC+AGG | 0.466784 | 4.2:+6375493 | None:intergenic |
| TCTTCGCGCGGATTGGCTCA+GGG | 0.472077 | 4.2:-6375628 | MS.gene93202:CDS |
| GAAACGAACAAAGGCGCACT+TGG | 0.476109 | 4.2:+6375457 | None:intergenic |
| GGCAGTTGGCATTGCTGTTG+GGG | 0.477281 | 4.2:-6375248 | MS.gene93202:CDS |
| TTGCTGTGGTGAGGACGAAA+GGG | 0.479403 | 4.2:-6374846 | MS.gene93202:CDS |
| CGATTGCTAGTTATGTTCAT+GGG | 0.481862 | 4.2:-6375756 | MS.gene93202:CDS |
| TACTATCCTCCTCTTTCAAA+TGG | 0.483577 | 4.2:-6374514 | MS.gene93202:CDS |
| TCCAACGCAAATGTCACAAC+AGG | 0.486132 | 4.2:+6375415 | None:intergenic |
| TCGATGACCGAGAAGAGTGC+AGG | 0.490095 | 4.2:-6373245 | MS.gene93202:CDS |
| TGGTGGATCCTGAGCGGCAT+AGG | 0.495152 | 4.2:-6375501 | MS.gene93202:CDS |
| CTCCTCTTTCAAATGGTCAC+AGG | 0.497529 | 4.2:-6374507 | MS.gene93202:CDS |
| GTTGCTGTGGTGAGGACGAA+AGG | 0.503031 | 4.2:-6374847 | MS.gene93202:CDS |
| AAGCGATGGGTTTACGTACC+GGG | 0.504543 | 4.2:-6375789 | MS.gene93202:CDS |
| TTTGTTTGAGACACAGGTGT+TGG | 0.506074 | 4.2:-6375350 | MS.gene93202:CDS |
| AGTAATCTAGACAAGGCATC+AGG | 0.506209 | 4.2:+6375112 | None:intergenic |
| CCCTCTAACAATATCCTCCA+AGG | 0.511090 | 4.2:+6375222 | None:intergenic |
| TTTCGTCCGGTTTACTAGGA+AGG | 0.513445 | 4.2:-6375300 | MS.gene93202:CDS |
| CATACATGGATCTTCACCCT+TGG | 0.516195 | 4.2:+6374754 | None:intergenic |
| TGTTCATGGGGATAATCAGT+TGG | 0.516920 | 4.2:-6375743 | MS.gene93202:CDS |
| ATTGTGCCTTCCTAGTAAAC+CGG | 0.517946 | 4.2:+6375294 | None:intergenic |
| GTGTTGGTTAATACACCTGC+TGG | 0.525818 | 4.2:-6375334 | MS.gene93202:CDS |
| TGTGCGAGCTTCAGTTGCAA+TGG | 0.526133 | 4.2:-6374455 | MS.gene93202:CDS |
| GGGATACTGGAAATTTCGTC+CGG | 0.527829 | 4.2:-6375313 | MS.gene93202:CDS |
| ACTCTCTTTGTTTGAGACAC+AGG | 0.527870 | 4.2:-6375356 | MS.gene93202:CDS |
| GTTGACGAGCTTCATCAAGC+TGG | 0.530037 | 4.2:-6373207 | MS.gene93202:CDS |
| AACATTTGACATTACCGCCA+TGG | 0.539836 | 4.2:+6373165 | None:intergenic |
| ATGTCACAACAGGAACTTCA+GGG | 0.545053 | 4.2:+6375425 | None:intergenic |
| ATATGTTGGCTGGGGTAGGA+TGG | 0.546203 | 4.2:-6374573 | MS.gene93202:CDS |
| AAGAGGTTGATGCAGTTCCT+GGG | 0.546388 | 4.2:-6375195 | MS.gene93202:CDS |
| GGGTCATAGTGGACTATGCT+CGG | 0.551938 | 4.2:-6375138 | MS.gene93202:CDS |
| CTTCGCGCGGATTGGCTCAG+GGG | 0.552284 | 4.2:-6375627 | MS.gene93202:CDS |
| AAAAGTATGTATGAAGCGAT+GGG | 0.554179 | 4.2:-6375802 | MS.gene93202:CDS |
| TACGAATTTGATGGATGAGG+AGG | 0.554797 | 4.2:-6375569 | MS.gene93202:CDS |
| GAAGCGATGGGTTTACGTAC+CGG | 0.555215 | 4.2:-6375790 | MS.gene93202:CDS |
| TCCTGTTGTGACATTTGCGT+TGG | 0.555371 | 4.2:-6375416 | MS.gene93202:CDS |
| CCTTGGAGGATATTGTTAGA+GGG | 0.557443 | 4.2:-6375222 | MS.gene93202:CDS |
| ACTATCAAAATCTAAATCAA+AGG | 0.561397 | 4.2:+6376248 | None:intergenic |
| TAAGAGAGCTTCAACCTCGC+AGG | 0.561657 | 4.2:-6375081 | MS.gene93202:CDS |
| TCAATTAACTCACACCTCCC+AGG | 0.561944 | 4.2:+6375178 | None:intergenic |
| CAGCTACCCTCCTAATGTCA+TGG | 0.562556 | 4.2:+6374476 | None:intergenic |
| ACAAGCATTTGGGGTCATAG+TGG | 0.564472 | 4.2:-6375149 | MS.gene93202:CDS |
| TCAGTTGGATTCGTCTTATG+GGG | 0.564527 | 4.2:-6375728 | MS.gene93202:CDS |
| TTTGAAGTGATTGGTTGCTG+TGG | 0.568006 | 4.2:-6374860 | MS.gene93202:intron |
| AAATGCTGTTCTTGCTACGT+TGG | 0.568754 | 4.2:-6375914 | MS.gene93202:CDS |
| TAGATACAAGTGAATTTCCA+TGG | 0.572678 | 4.2:-6373182 | MS.gene93202:CDS |
| GTGCAGGTGATTGCTGGTAA+AGG | 0.573284 | 4.2:-6373309 | MS.gene93202:intron |
| GTTGCTATCTTTGTCATCAG+GGG | 0.577328 | 4.2:+6374815 | None:intergenic |
| TTACAACATTCTTGCTGCTG+TGG | 0.577487 | 4.2:-6375269 | MS.gene93202:CDS |
| GGAAGAGGATAGAGATGCGA+AGG | 0.577527 | 4.2:-6375542 | MS.gene93202:CDS |
| TATTGTTAGAGGGATTGAAG+AGG | 0.584456 | 4.2:-6375212 | MS.gene93202:CDS |
| CGATGACCGAGAAGAGTGCA+GGG | 0.586317 | 4.2:-6373244 | MS.gene93202:CDS |
| AAAGAGAGTTCAAACTTCAA+GGG | 0.587138 | 4.2:+6375370 | None:intergenic |
| GACGATATGTTGGCTGGGGT+AGG | 0.590280 | 4.2:-6374577 | MS.gene93202:CDS |
| TTTGATGGATGAGGAGGACG+AGG | 0.591487 | 4.2:-6375563 | MS.gene93202:CDS |
| AGCCTGTGACCATTTGAAAG+AGG | 0.592989 | 4.2:+6374505 | None:intergenic |
| GGGGTTGTCGGATGTCAGCA+TGG | 0.593109 | 4.2:+6374775 | None:intergenic |
| CGCCTTTGTTCGTTTCAATG+GGG | 0.598646 | 4.2:-6375450 | MS.gene93202:CDS |
| GCGAGCTTCAGTTGCAATGG+GGG | 0.600223 | 4.2:-6374452 | MS.gene93202:CDS |
| TTGAGTGAGGCTGATAAGAG+AGG | 0.600487 | 4.2:-6376018 | MS.gene93202:CDS |
| GAAATTTCCAGTATCCCAGC+AGG | 0.601448 | 4.2:+6375319 | None:intergenic |
| TACATGGATCTTCACCCTTG+GGG | 0.602061 | 4.2:+6374756 | None:intergenic |
| TGACGAGGAACAAGCATTTG+GGG | 0.607098 | 4.2:-6375158 | MS.gene93202:CDS |
| CTCCCCATTGAAACGAACAA+AGG | 0.607522 | 4.2:+6375448 | None:intergenic |
| TTTGGACGATATGTTGGCTG+GGG | 0.620608 | 4.2:-6374581 | MS.gene93202:CDS |
| AGCAATCGAGTTAAACATCC+CGG | 0.622878 | 4.2:+6375771 | None:intergenic |
| CTGTGACCATTTGAAAGAGG+AGG | 0.627307 | 4.2:+6374508 | None:intergenic |
| AGTGATTGGTTGCTGTGGTG+AGG | 0.627564 | 4.2:-6374855 | MS.gene93202:CDS |
| CCTCTAACAATATCCTCCAA+GGG | 0.631799 | 4.2:+6375223 | None:intergenic |
| TGCGAGCTTCAGTTGCAATG+GGG | 0.637029 | 4.2:-6374453 | MS.gene93202:CDS |
| GCTGTGGTGAGGACGAAAGG+GGG | 0.640166 | 4.2:-6374844 | MS.gene93202:CDS |
| TCATAATGGAACTGAATCTG+TGG | 0.641742 | 4.2:-6375662 | MS.gene93202:CDS |
| GATTGCTAGTTATGTTCATG+GGG | 0.647011 | 4.2:-6375755 | MS.gene93202:CDS |
| TGTTGGTTAATACACCTGCT+GGG | 0.653292 | 4.2:-6375333 | MS.gene93202:CDS |
| TGCTGTGGTGAGGACGAAAG+GGG | 0.660888 | 4.2:-6374845 | MS.gene93202:CDS |
| GGCTCAGGGGAAATATGATG+AGG | 0.665665 | 4.2:-6375614 | MS.gene93202:CDS |
| CAAGGATGGTGGATCCTGAG+CGG | 0.668101 | 4.2:-6375507 | MS.gene93202:CDS |
| GCTGACATCCGACAACCCCA+AGG | 0.672170 | 4.2:-6374771 | MS.gene93202:CDS |
| CTGACATCCGACAACCCCAA+GGG | 0.697527 | 4.2:-6374770 | MS.gene93202:CDS |
| AGAATCAAGTAATCTAGACA+AGG | 0.699983 | 4.2:+6375105 | None:intergenic |
| AGGTTGATGCAGTTCCTGGG+AGG | 0.713356 | 4.2:-6375192 | MS.gene93202:CDS |
| TGGCTCTTATTGGGATAACG+GGG | 0.726754 | 4.2:-6375858 | MS.gene93202:CDS |
| ATACCAGTTATAATCCTGCG+AGG | 0.748233 | 4.2:+6375067 | None:intergenic |
| TGACCGAGAAGAGTGCAGGG+AGG | 0.749733 | 4.2:-6373241 | MS.gene93202:CDS |
| GAGGTGTGAGTTAATTGACG+AGG | 0.756211 | 4.2:-6375173 | MS.gene93202:CDS |
| ATACAAGTGAATTTCCATGG+CGG | 0.800600 | 4.2:-6373179 | MS.gene93202:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAGATGAGT+TGG | + | chr4.2:6375826-6375845 | None:intergenic | 15.0% |
| !! | ACAAAATTCTGAATATTTAT+AGG | - | chr4.2:6375206-6375225 | MS.gene93202:CDS | 15.0% |
| !! | ATGAAATTCTGAATATTTAT+AGG | + | chr4.2:6375046-6375065 | None:intergenic | 15.0% |
| !! | CAAAATTCTGAATATTTATA+GGG | - | chr4.2:6375207-6375226 | MS.gene93202:CDS | 15.0% |
| !! | TGAAATTCTGAATATTTATA+GGG | + | chr4.2:6375045-6375064 | None:intergenic | 15.0% |
| !!! | AAAGTGTAATTTTATTTTGT+AGG | - | chr4.2:6375175-6375194 | MS.gene93202:CDS | 15.0% |
| !!! | AACTCATCTTTTTTTTTTTT+TGG | - | chr4.2:6375825-6375844 | MS.gene93202:CDS | 15.0% |
| !!! | AAGTGTAATTTTATTTTGTA+GGG | - | chr4.2:6375176-6375195 | MS.gene93202:CDS | 15.0% |
| !!! | ACTCATCTTTTTTTTTTTTT+GGG | - | chr4.2:6375826-6375845 | MS.gene93202:CDS | 15.0% |
| !!! | ATTTAGATTTTGATAGTTTA+GGG | - | chr4.2:6373058-6373077 | MS.gene93202:intron | 15.0% |
| !! | AACAAACATAGAATAACTAT+TGG | - | chr4.2:6375496-6375515 | MS.gene93202:CDS | 20.0% |
| !! | AATAGGGTTAATTAAGTAAA+TGG | - | chr4.2:6375018-6375037 | MS.gene93202:intron | 20.0% |
| !! | AATTTGGAAGTTGAAATTAA+TGG | - | chr4.2:6373177-6373196 | MS.gene93202:intron | 20.0% |
| !! | ACTATCAAAATCTAAATCAA+AGG | + | chr4.2:6373055-6373074 | None:intergenic | 20.0% |
| !! | ATTAAATCTTACTTAGTGAA+TGG | - | chr4.2:6375731-6375750 | MS.gene93202:CDS | 20.0% |
| !! | ATTGATATTGAAGATACTTT+AGG | - | chr4.2:6373333-6373352 | MS.gene93202:intron | 20.0% |
| !! | CAAAATATTAATATGCAAGA+AGG | - | chr4.2:6375913-6375932 | MS.gene93202:CDS | 20.0% |
| !! | GCATAATTAATTATATCGTT+TGG | - | chr4.2:6374368-6374387 | MS.gene93202:intron | 20.0% |
| !! | GTTTGATGCATTTAAATTTA+AGG | + | chr4.2:6375479-6375498 | None:intergenic | 20.0% |
| !!! | AAGAAGGAATTGTTTATTTT+TGG | - | chr4.2:6375929-6375948 | MS.gene93202:CDS | 20.0% |
| !!! | ACTTTTTACTTTTTATTCAG+TGG | - | chr4.2:6374692-6374711 | MS.gene93202:intron | 20.0% |
| !!! | ATATTTTCCTTTAGCATTTT+AGG | + | chr4.2:6375143-6375162 | None:intergenic | 20.0% |
| !!! | CTTCTTGCATATTAATATTT+TGG | + | chr4.2:6375915-6375934 | None:intergenic | 20.0% |
| !!! | GATTTAGATTTTGATAGTTT+AGG | - | chr4.2:6373057-6373076 | MS.gene93202:intron | 20.0% |
| !!! | GTAAAAAGTATGAAAGAATT+AGG | + | chr4.2:6374681-6374700 | None:intergenic | 20.0% |
| !!! | TATTTTCCTTTAGCATTTTA+GGG | + | chr4.2:6375142-6375161 | None:intergenic | 20.0% |
| !!! | TTGCTTAATTTAAACCATTT+TGG | - | chr4.2:6374965-6374984 | MS.gene93202:intron | 20.0% |
| !!! | TTTTACGTCAACATTTTTTT+TGG | - | chr4.2:6375115-6375134 | MS.gene93202:CDS | 20.0% |
| !!! | TTTTTATTCAGTGGATATTT+TGG | - | chr4.2:6374701-6374720 | MS.gene93202:intron | 20.0% |
| !!! | TTTTTGGGTTACTAATTATA+AGG | - | chr4.2:6374321-6374340 | MS.gene93202:intron | 20.0% |
| ! | AATTATTATTCGTATTCACG+TGG | - | chr4.2:6375527-6375546 | MS.gene93202:CDS | 25.0% |
| ! | ACACATCTTAATATTGTTCA+AGG | + | chr4.2:6375251-6375270 | None:intergenic | 25.0% |
| ! | AGTTAAGACATTGTGAAATT+TGG | + | chr4.2:6374642-6374661 | None:intergenic | 25.0% |
| ! | AGTTCAAAACAAAATTGAGA+AGG | + | chr4.2:6374292-6374311 | None:intergenic | 25.0% |
| ! | ATACGAATAATAATTGTGGA+TGG | + | chr4.2:6375522-6375541 | None:intergenic | 25.0% |
| ! | ATCTAAATCAAAGGAAGATT+CGG | + | chr4.2:6373046-6373065 | None:intergenic | 25.0% |
| ! | ATTAGGATTCCAACATTTAA+GGG | + | chr4.2:6375648-6375667 | None:intergenic | 25.0% |
| ! | CACATCTTAATATTGTTCAA+GGG | + | chr4.2:6375250-6375269 | None:intergenic | 25.0% |
| ! | CATGAAACATATCAAATAGA+AGG | - | chr4.2:6376015-6376034 | MS.gene93202:CDS | 25.0% |
| ! | CTTCAAAAGAAGAAAAAAGA+CGG | + | chr4.2:6374427-6374446 | None:intergenic | 25.0% |
| ! | CTTCTATTTGATATGTTTCA+TGG | + | chr4.2:6376017-6376036 | None:intergenic | 25.0% |
| ! | GTGAATACGAATAATAATTG+TGG | + | chr4.2:6375526-6375545 | None:intergenic | 25.0% |
| ! | GTTAAGACATTGTGAAATTT+GGG | + | chr4.2:6374641-6374660 | None:intergenic | 25.0% |
| ! | TCAAAGTGATATTTCAACTA+AGG | - | chr4.2:6375272-6375291 | MS.gene93202:CDS | 25.0% |
| ! | TCAAGGGTTAATTAAGTAAA+TGG | + | chr4.2:6375234-6375253 | None:intergenic | 25.0% |
| ! | TCACTAAGTAAGATTTAATG+AGG | + | chr4.2:6375730-6375749 | None:intergenic | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | + | chr4.2:6375384-6375403 | None:intergenic | 25.0% |
| ! | TGTATTTCTCTTAATTGATG+TGG | - | chr4.2:6374259-6374278 | MS.gene93202:intron | 25.0% |
| !! | GTTGACGTAAAATTTTTACA+GGG | + | chr4.2:6375107-6375126 | None:intergenic | 25.0% |
| !! | TGTTGACGTAAAATTTTTAC+AGG | + | chr4.2:6375108-6375127 | None:intergenic | 25.0% |
| !! | TTCCATTGCTACTTAATTTA+GGG | + | chr4.2:6375415-6375434 | None:intergenic | 25.0% |
| !! | TTTCCATTGCTACTTAATTT+AGG | + | chr4.2:6375416-6375435 | None:intergenic | 25.0% |
| !!! | ATTTAAACCATTTTGGTTCT+TGG | - | chr4.2:6374972-6374991 | MS.gene93202:intron | 25.0% |
| !!! | TCTCAATTTTGTTTTGAACT+TGG | - | chr4.2:6374292-6374311 | MS.gene93202:intron | 25.0% |
| !!! | TGAACTTGGAGAAATTTTTT+GGG | - | chr4.2:6374306-6374325 | MS.gene93202:intron | 25.0% |
| !!! | TGTTGTTGCAACTTATTTTA+GGG | + | chr4.2:6375303-6375322 | None:intergenic | 25.0% |
| !!! | TTGAACTTGGAGAAATTTTT+TGG | - | chr4.2:6374305-6374324 | MS.gene93202:intron | 25.0% |
| !!! | TTGTTGTTGCAACTTATTTT+AGG | + | chr4.2:6375304-6375323 | None:intergenic | 25.0% |
| !!! | TTTTCTTCTTTTGAAGTGAT+TGG | - | chr4.2:6374431-6374450 | MS.gene93202:intron | 25.0% |
| !!! | TTTTGTTGTCTTTTTATGAC+TGG | - | chr4.2:6376164-6376183 | MS.gene93202:CDS | 25.0% |
| !!! | TTTTTTTTTGGGTATGAACT+TGG | - | chr4.2:6375837-6375856 | MS.gene93202:CDS | 25.0% |
| AAAAGAAGAAAAAAGACGGT+CGG | + | chr4.2:6374423-6374442 | None:intergenic | 30.0% | |
| AAAGAGAGTTCAAACTTCAA+GGG | + | chr4.2:6373933-6373952 | None:intergenic | 30.0% | |
| ACTAATCCCCTTAATCATTT+CGG | - | chr4.2:6375884-6375903 | MS.gene93202:CDS | 30.0% | |
| AGAAATACCAAGAACCAAAA+TGG | + | chr4.2:6374982-6375001 | None:intergenic | 30.0% | |
| AGAATCAAGTAATCTAGACA+AGG | + | chr4.2:6374198-6374217 | None:intergenic | 30.0% | |
| ATGCTAAAGGAAAATATCAC+AGG | - | chr4.2:6375146-6375165 | MS.gene93202:CDS | 30.0% | |
| ATGGAATTCAACATGATTCT+AGG | - | chr4.2:6373196-6373215 | MS.gene93202:CDS | 30.0% | |
| CCAATGTCAAAATACATACA+TGG | + | chr4.2:6374563-6374582 | None:intergenic | 30.0% | |
| CTTAATTTAGGGAAATGTGA+TGG | + | chr4.2:6375404-6375423 | None:intergenic | 30.0% | |
| GATCTTATGAAGTTACAACT+TGG | - | chr4.2:6375594-6375613 | MS.gene93202:CDS | 30.0% | |
| GATTAGGATTCCAACATTTA+AGG | + | chr4.2:6375649-6375668 | None:intergenic | 30.0% | |
| GCTAAACTCATCTTAAACTT+AGG | + | chr4.2:6373111-6373130 | None:intergenic | 30.0% | |
| TAAGTATCCTTCGAAAAACA+TGG | - | chr4.2:6373422-6373441 | MS.gene93202:intron | 30.0% | |
| TAGATACAAGTGAATTTCCA+TGG | - | chr4.2:6376118-6376137 | MS.gene93202:CDS | 30.0% | |
| TCAAATAGAAGGTGAGAAAA+AGG | - | chr4.2:6376026-6376045 | MS.gene93202:CDS | 30.0% | |
| TGCTAAAGGAAAATATCACA+GGG | - | chr4.2:6375147-6375166 | MS.gene93202:CDS | 30.0% | |
| TTAATGAGGAAAAAATCGAC+AGG | + | chr4.2:6375716-6375735 | None:intergenic | 30.0% | |
| TTAGGATTCCAACATTTAAG+GGG | + | chr4.2:6375647-6375666 | None:intergenic | 30.0% | |
| TTCAAAGCTGTTGACAAATT+TGG | - | chr4.2:6375448-6375467 | MS.gene93202:CDS | 30.0% | |
| TTCCCTAAATTAAGTAGCAA+TGG | - | chr4.2:6375410-6375429 | MS.gene93202:CDS | 30.0% | |
| TTCGTATATTGCTCTTAACA+AGG | + | chr4.2:6374600-6374619 | None:intergenic | 30.0% | |
| TTTCTCTTAATTGATGTGGA+AGG | - | chr4.2:6374263-6374282 | MS.gene93202:intron | 30.0% | |
| ! | AAAAGTATGTATGAAGCGAT+GGG | - | chr4.2:6373498-6373517 | MS.gene93202:intron | 30.0% |
| ! | AATTTGTTTGTGTGTTGTGT+TGG | - | chr4.2:6373234-6373253 | MS.gene93202:CDS | 30.0% |
| ! | ATGCTGACGAAAATTTTTAC+AGG | + | chr4.2:6375077-6375096 | None:intergenic | 30.0% |
| ! | GGAATGTGATTTGTCAATAA+GGG | - | chr4.2:6375950-6375969 | MS.gene93202:CDS | 30.0% |
| ! | TAAAAGTATGTATGAAGCGA+TGG | - | chr4.2:6373497-6373516 | MS.gene93202:intron | 30.0% |
| ! | TGCTGACGAAAATTTTTACA+GGG | + | chr4.2:6375076-6375095 | None:intergenic | 30.0% |
| ! | TGGAATGTGATTTGTCAATA+AGG | - | chr4.2:6375949-6375968 | MS.gene93202:CDS | 30.0% |
| !! | AGGATTAGTTAAAGCTTCAT+AGG | + | chr4.2:6375696-6375715 | None:intergenic | 30.0% |
| !! | ATGCAAGAGTATCTGAAATA+TGG | - | chr4.2:6374753-6374772 | MS.gene93202:intron | 30.0% |
| !! | TGAAGATACTTTAGGTTGTA+AGG | - | chr4.2:6373341-6373360 | MS.gene93202:intron | 30.0% |
| !! | TTTGTCAACAGCTTTGAATA+TGG | + | chr4.2:6375446-6375465 | None:intergenic | 30.0% |
| !! | TTTTACGAATTTGATGGATG+AGG | - | chr4.2:6373728-6373747 | MS.gene93202:intron | 30.0% |
| !!! | CCATGTATGTATTTTGACAT+TGG | - | chr4.2:6374560-6374579 | MS.gene93202:CDS | 30.0% |
| !!! | TGCTGTTTTTACGAATTTGA+TGG | - | chr4.2:6373722-6373741 | MS.gene93202:intron | 30.0% |
| !!! | TGTTTTGGTTCAGAATTTGA+TGG | - | chr4.2:6373605-6373624 | MS.gene93202:intron | 30.0% |
| AATCAGTTGGATTCGTCTTA+TGG | - | chr4.2:6373570-6373589 | MS.gene93202:intron | 35.0% | |
| ATACAAGTGAATTTCCATGG+CGG | - | chr4.2:6376121-6376140 | MS.gene93202:CDS | 35.0% | |
| ATCAGTTGGATTCGTCTTAT+GGG | - | chr4.2:6373571-6373590 | MS.gene93202:intron | 35.0% | |
| ATGGCTAAGATGCTTCATAA+TGG | - | chr4.2:6373624-6373643 | MS.gene93202:intron | 35.0% | |
| CAAAGAGAGTTCAAACTTCA+AGG | + | chr4.2:6373934-6373953 | None:intergenic | 35.0% | |
| CGAAAAACATGGCTCTTATT+GGG | - | chr4.2:6373433-6373452 | MS.gene93202:intron | 35.0% | |
| CGATTGCTAGTTATGTTCAT+GGG | - | chr4.2:6373544-6373563 | MS.gene93202:intron | 35.0% | |
| CTACTTAAACGAGACAGATT+AGG | + | chr4.2:6375665-6375684 | None:intergenic | 35.0% | |
| GATTGCTAGTTATGTTCATG+GGG | - | chr4.2:6373545-6373564 | MS.gene93202:intron | 35.0% | |
| GGTGATTCCGAAATGATTAA+GGG | + | chr4.2:6375894-6375913 | None:intergenic | 35.0% | |
| GTGATTCCGAAATGATTAAG+GGG | + | chr4.2:6375893-6375912 | None:intergenic | 35.0% | |
| TACTATCCTCCTCTTTCAAA+TGG | - | chr4.2:6374786-6374805 | MS.gene93202:CDS | 35.0% | |
| TATTGTTAGAGGGATTGAAG+AGG | - | chr4.2:6374088-6374107 | MS.gene93202:intron | 35.0% | |
| TCACAATGTCTTAACTAGCA+GGG | - | chr4.2:6374646-6374665 | MS.gene93202:intron | 35.0% | |
| TCGAAAAACATGGCTCTTAT+TGG | - | chr4.2:6373432-6373451 | MS.gene93202:intron | 35.0% | |
| TCGATTGCTAGTTATGTTCA+TGG | - | chr4.2:6373543-6373562 | MS.gene93202:intron | 35.0% | |
| TCTCTTGCATTTATTGTTGC+AGG | - | chr4.2:6376275-6376294 | MS.gene93202:CDS | 35.0% | |
| TGGTGATTCCGAAATGATTA+AGG | + | chr4.2:6375895-6375914 | None:intergenic | 35.0% | |
| TGTGGAAAAGCTGAACAATA+GGG | - | chr4.2:6375002-6375021 | MS.gene93202:intron | 35.0% | |
| TGTGTTGGAAGAAAAAACGA+TGG | - | chr4.2:6373249-6373268 | MS.gene93202:CDS | 35.0% | |
| TGTTGCTATCTTTGTCATCA+GGG | + | chr4.2:6374489-6374508 | None:intergenic | 35.0% | |
| TTAAAGCTTCATAGGAAGCA+AGG | + | chr4.2:6375688-6375707 | None:intergenic | 35.0% | |
| TTCACAATGTCTTAACTAGC+AGG | - | chr4.2:6374645-6374664 | MS.gene93202:intron | 35.0% | |
| TTGTGGAAAAGCTGAACAAT+AGG | - | chr4.2:6375001-6375020 | MS.gene93202:intron | 35.0% | |
| TTTGGTCCCTAAAATGCTAA+AGG | - | chr4.2:6375133-6375152 | MS.gene93202:CDS | 35.0% | |
| ! | AACTGAATCTGTGGTTTTTG+AGG | - | chr4.2:6373647-6373666 | MS.gene93202:intron | 35.0% |
| ! | TCATAATGGAACTGAATCTG+TGG | - | chr4.2:6373638-6373657 | MS.gene93202:intron | 35.0% |
| ! | TTGGTTCTTGGTATTTCTTG+TGG | - | chr4.2:6374984-6375003 | MS.gene93202:intron | 35.0% |
| ! | TTGTAAGGCTTTGGTTATTG+TGG | - | chr4.2:6373356-6373375 | MS.gene93202:intron | 35.0% |
| ! | TTGTCTTTTTATGACTGGCA+TGG | - | chr4.2:6376169-6376188 | MS.gene93202:CDS | 35.0% |
| ! | TTTTCTCCATGACATTAGGA+GGG | - | chr4.2:6374818-6374837 | MS.gene93202:CDS | 35.0% |
| ! | TTTTTCTCCATGACATTAGG+AGG | - | chr4.2:6374817-6374836 | MS.gene93202:CDS | 35.0% |
| !! | ATAAGAGCCATGTTTTTCGA+AGG | + | chr4.2:6373432-6373451 | None:intergenic | 35.0% |
| !! | GGATATTTTGGACGATATGT+TGG | - | chr4.2:6374713-6374732 | MS.gene93202:intron | 35.0% |
| !! | TACTTTAGGTTGTAAGGCTT+TGG | - | chr4.2:6373347-6373366 | MS.gene93202:intron | 35.0% |
| !!! | TGGACATATGTTTTTGAGTG+AGG | - | chr4.2:6373269-6373288 | MS.gene93202:CDS | 35.0% |
| AAATGCTGTTCTTGCTACGT+TGG | - | chr4.2:6373386-6373405 | MS.gene93202:intron | 40.0% | |
| AAATTCCCGTAAACCGAAAC+AGG | + | chr4.2:6373162-6373181 | None:intergenic | 40.0% | |
| AACATTTGACATTACCGCCA+TGG | + | chr4.2:6376138-6376157 | None:intergenic | 40.0% | |
| AATGTCACAACAGGAACTTC+AGG | + | chr4.2:6373879-6373898 | None:intergenic | 40.0% | |
| AGCAATCGAGTTAAACATCC+CGG | + | chr4.2:6373532-6373551 | None:intergenic | 40.0% | |
| ATACATGGATCTTCACCCTT+GGG | + | chr4.2:6374548-6374567 | None:intergenic | 40.0% | |
| ATACCAGTTATAATCCTGCG+AGG | + | chr4.2:6374236-6374255 | None:intergenic | 40.0% | |
| ATGGCTCTTATTGGGATAAC+GGG | - | chr4.2:6373441-6373460 | MS.gene93202:intron | 40.0% | |
| ATGTCACAACAGGAACTTCA+GGG | + | chr4.2:6373878-6373897 | None:intergenic | 40.0% | |
| ATTGACGAGGAACAAGCATT+TGG | - | chr4.2:6374140-6374159 | MS.gene93202:intron | 40.0% | |
| ATTGTGCCTTCCTAGTAAAC+CGG | + | chr4.2:6374009-6374028 | None:intergenic | 40.0% | |
| CATGGCTCTTATTGGGATAA+CGG | - | chr4.2:6373440-6373459 | MS.gene93202:intron | 40.0% | |
| CCTCTAACAATATCCTCCAA+GGG | + | chr4.2:6374080-6374099 | None:intergenic | 40.0% | |
| CCTTGGAGGATATTGTTAGA+GGG | - | chr4.2:6374078-6374097 | MS.gene93202:intron | 40.0% | |
| CTGTTGCTATCTTTGTCATC+AGG | + | chr4.2:6374490-6374509 | None:intergenic | 40.0% | |
| GAAATTTCGTCCGGTTTACT+AGG | - | chr4.2:6373996-6374015 | MS.gene93202:intron | 40.0% | |
| GAGTAAAGTGGTTCCTGTTT+CGG | - | chr4.2:6373146-6373165 | MS.gene93202:intron | 40.0% | |
| GTTGCTATCTTTGTCATCAG+GGG | + | chr4.2:6374488-6374507 | None:intergenic | 40.0% | |
| TCAGTTGGATTCGTCTTATG+GGG | - | chr4.2:6373572-6373591 | MS.gene93202:intron | 40.0% | |
| TCATGCATGAAACTGAACGT+TGG | + | chr4.2:6375565-6375584 | None:intergenic | 40.0% | |
| TGTTCATGGGGATAATCAGT+TGG | - | chr4.2:6373557-6373576 | MS.gene93202:intron | 40.0% | |
| TGTTTCGGTTTACGGGAATT+TGG | - | chr4.2:6373161-6373180 | MS.gene93202:intron | 40.0% | |
| TTACAACATTCTTGCTGCTG+TGG | - | chr4.2:6374031-6374050 | MS.gene93202:intron | 40.0% | |
| TTGACGAGGAACAAGCATTT+GGG | - | chr4.2:6374141-6374160 | MS.gene93202:intron | 40.0% | |
| ! | ACTCTCTTTGTTTGAGACAC+AGG | - | chr4.2:6373944-6373963 | MS.gene93202:intron | 40.0% |
| ! | AGGGTACACTTTTATGTGCA+TGG | - | chr4.2:6375969-6375988 | MS.gene93202:CDS | 40.0% |
| ! | AGTAATCTAGACAAGGCATC+AGG | + | chr4.2:6374191-6374210 | None:intergenic | 40.0% |
| ! | ATTTTGGACGATATGTTGGC+TGG | - | chr4.2:6374717-6374736 | MS.gene93202:intron | 40.0% |
| ! | GATGAGTTTAGCTGAGCTTT+TGG | - | chr4.2:6373119-6373138 | MS.gene93202:intron | 40.0% |
| ! | GCTTTTGGATGAGAGTAAAG+TGG | - | chr4.2:6373134-6373153 | MS.gene93202:intron | 40.0% |
| ! | TACGAATTTGATGGATGAGG+AGG | - | chr4.2:6373731-6373750 | MS.gene93202:intron | 40.0% |
| ! | TCCAACATTTAAGGGGTACA+GGG | + | chr4.2:6375640-6375659 | None:intergenic | 40.0% |
| ! | TGTTGGTTAATACACCTGCT+GGG | - | chr4.2:6373967-6373986 | MS.gene93202:intron | 40.0% |
| ! | TTCCAACATTTAAGGGGTAC+AGG | + | chr4.2:6375641-6375660 | None:intergenic | 40.0% |
| ! | TTTGAAGTGATTGGTTGCTG+TGG | - | chr4.2:6374440-6374459 | MS.gene93202:CDS | 40.0% |
| ! | TTTGTTTGAGACACAGGTGT+TGG | - | chr4.2:6373950-6373969 | MS.gene93202:intron | 40.0% |
| !! | GATTCTAGGCTTGTTACTTC+TGG | - | chr4.2:6373210-6373229 | MS.gene93202:CDS | 40.0% |
| !! | GGCTTTTTCTCCATGACATT+AGG | - | chr4.2:6374814-6374833 | MS.gene93202:CDS | 40.0% |
| !! | TAAGCTGTTTTCAAGGATGG+TGG | - | chr4.2:6373782-6373801 | MS.gene93202:intron | 40.0% |
| !! | TTTTGGACGATATGTTGGCT+GGG | - | chr4.2:6374718-6374737 | MS.gene93202:intron | 40.0% |
| ACAGGGAAGTCAGCTTATCA+TGG | + | chr4.2:6375623-6375642 | None:intergenic | 45.0% | |
| AGCCTGTGACCATTTGAAAG+AGG | + | chr4.2:6374798-6374817 | None:intergenic | 45.0% | |
| CAACCTCGCAGGATTATAAC+TGG | - | chr4.2:6374230-6374249 | MS.gene93202:intron | 45.0% | |
| CATACATGGATCTTCACCCT+TGG | + | chr4.2:6374549-6374568 | None:intergenic | 45.0% | |
| CCCTCTAACAATATCCTCCA+AGG | + | chr4.2:6374081-6374100 | None:intergenic | 45.0% | |
| CCCTTGGAGGATATTGTTAG+AGG | - | chr4.2:6374077-6374096 | MS.gene93202:intron | 45.0% | |
| CGCCTTTGTTCGTTTCAATG+GGG | - | chr4.2:6373850-6373869 | MS.gene93202:intron | 45.0% | |
| CTCCCCATTGAAACGAACAA+AGG | + | chr4.2:6373855-6373874 | None:intergenic | 45.0% | |
| CTCCTCTTTCAAATGGTCAC+AGG | - | chr4.2:6374793-6374812 | MS.gene93202:CDS | 45.0% | |
| CTGTGACCATTTGAAAGAGG+AGG | + | chr4.2:6374795-6374814 | None:intergenic | 45.0% | |
| GAAATTTCCAGTATCCCAGC+AGG | + | chr4.2:6373984-6374003 | None:intergenic | 45.0% | |
| GAGGTGTGAGTTAATTGACG+AGG | - | chr4.2:6374127-6374146 | MS.gene93202:intron | 45.0% | |
| GCGCCTTTGTTCGTTTCAAT+GGG | - | chr4.2:6373849-6373868 | MS.gene93202:intron | 45.0% | |
| GGGATACTGGAAATTTCGTC+CGG | - | chr4.2:6373987-6374006 | MS.gene93202:intron | 45.0% | |
| GTGGTTCCTGTTTCGGTTTA+CGG | - | chr4.2:6373153-6373172 | MS.gene93202:intron | 45.0% | |
| TAATACACCTGCTGGGATAC+TGG | - | chr4.2:6373974-6373993 | MS.gene93202:intron | 45.0% | |
| TACATGGATCTTCACCCTTG+GGG | + | chr4.2:6374547-6374566 | None:intergenic | 45.0% | |
| TCAATTAACTCACACCTCCC+AGG | + | chr4.2:6374125-6374144 | None:intergenic | 45.0% | |
| TCCAACGCAAATGTCACAAC+AGG | + | chr4.2:6373888-6373907 | None:intergenic | 45.0% | |
| TCCCTGTACCCCTTAAATGT+TGG | - | chr4.2:6375636-6375655 | MS.gene93202:CDS | 45.0% | |
| TCCTGTTGTGACATTTGCGT+TGG | - | chr4.2:6373884-6373903 | MS.gene93202:intron | 45.0% | |
| TGACGAGGAACAAGCATTTG+GGG | - | chr4.2:6374142-6374161 | MS.gene93202:intron | 45.0% | |
| TGCATGAAACTGAACGTTGG+TGG | + | chr4.2:6375562-6375581 | None:intergenic | 45.0% | |
| TGCGCCTTTGTTCGTTTCAA+TGG | - | chr4.2:6373848-6373867 | MS.gene93202:intron | 45.0% | |
| TGGCTCTTATTGGGATAACG+GGG | - | chr4.2:6373442-6373461 | MS.gene93202:intron | 45.0% | |
| TGGTTCCTGTTTCGGTTTAC+GGG | - | chr4.2:6373154-6373173 | MS.gene93202:intron | 45.0% | |
| TTGAGTGAGGCTGATAAGAG+AGG | - | chr4.2:6373282-6373301 | MS.gene93202:CDS | 45.0% | |
| TTTCGTCCGGTTTACTAGGA+AGG | - | chr4.2:6374000-6374019 | MS.gene93202:intron | 45.0% | |
| TTTGACTGCCAGTCTACACT+TGG | - | chr4.2:6375799-6375818 | MS.gene93202:CDS | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr4.2:6375335-6375354 | MS.gene93202:CDS | 45.0% |
| ! | ACAAGCATTTGGGGTCATAG+TGG | - | chr4.2:6374151-6374170 | MS.gene93202:intron | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr4.2:6375334-6375353 | MS.gene93202:CDS | 45.0% |
| ! | CACTTTTATGTGCATGGTGC+AGG | - | chr4.2:6375975-6375994 | MS.gene93202:CDS | 45.0% |
| ! | TTTGGACGATATGTTGGCTG+GGG | - | chr4.2:6374719-6374738 | MS.gene93202:intron | 45.0% |
| !! | AAGAGGTTGATGCAGTTCCT+GGG | - | chr4.2:6374105-6374124 | MS.gene93202:intron | 45.0% |
| !! | ATTGGGATAACGGGGACTTA+TGG | - | chr4.2:6373450-6373469 | MS.gene93202:intron | 45.0% |
| !! | CGAAGGCTAAGCTGTTTTCA+AGG | - | chr4.2:6373775-6373794 | MS.gene93202:intron | 45.0% |
| !! | GGCTAAGCTGTTTTCAAGGA+TGG | - | chr4.2:6373779-6373798 | MS.gene93202:intron | 45.0% |
| !! | GTGTTGGTTAATACACCTGC+TGG | - | chr4.2:6373966-6373985 | MS.gene93202:intron | 45.0% |
| ACAACTTTCCTATGCCGCTC+AGG | + | chr4.2:6373810-6373829 | None:intergenic | 50.0% | |
| ACTAAGTGGGGTCAGCTTCA+TGG | - | chr4.2:6375347-6375366 | MS.gene93202:CDS | 50.0% | |
| ATCTTCACCCTTGGGGTTGT+CGG | + | chr4.2:6374540-6374559 | None:intergenic | 50.0% | |
| ATGAAGCTGACCCCACTTAG+TGG | + | chr4.2:6375348-6375367 | None:intergenic | 50.0% | |
| ATTCTTGCTGCTGTGGCAGT+TGG | - | chr4.2:6374038-6374057 | MS.gene93202:intron | 50.0% | |
| CAGCTACCCTCCTAATGTCA+TGG | + | chr4.2:6374827-6374846 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr4.2:6375336-6375355 | None:intergenic | 50.0% | |
| GGAAGAGGATAGAGATGCGA+AGG | - | chr4.2:6373758-6373777 | MS.gene93202:intron | 50.0% | |
| GGATTCGTCTTATGGGGTTC+TGG | - | chr4.2:6373578-6373597 | MS.gene93202:intron | 50.0% | |
| GGCTCAGGGGAAATATGATG+AGG | - | chr4.2:6373686-6373705 | MS.gene93202:intron | 50.0% | |
| GTGCAGGTGATTGCTGGTAA+AGG | - | chr4.2:6375991-6376010 | MS.gene93202:CDS | 50.0% | |
| GTGCGAGCTTCAGTTGCAAT+GGG | - | chr4.2:6374846-6374865 | MS.gene93202:CDS | 50.0% | |
| GTTGACGAGCTTCATCAAGC+TGG | - | chr4.2:6376093-6376112 | MS.gene93202:CDS | 50.0% | |
| TAAGAGAGCTTCAACCTCGC+AGG | - | chr4.2:6374219-6374238 | MS.gene93202:intron | 50.0% | |
| TGAAGCTGACCCCACTTAGT+GGG | + | chr4.2:6375347-6375366 | None:intergenic | 50.0% | |
| TGACCCCACTTAGTGGGATA+AGG | + | chr4.2:6375341-6375360 | None:intergenic | 50.0% | |
| TGCGAGCTTCAGTTGCAATG+GGG | - | chr4.2:6374847-6374866 | MS.gene93202:CDS | 50.0% | |
| TGTGCGAGCTTCAGTTGCAA+TGG | - | chr4.2:6374845-6374864 | MS.gene93202:CDS | 50.0% | |
| TTGCTGTGGTGAGGACGAAA+GGG | - | chr4.2:6374454-6374473 | MS.gene93202:CDS | 50.0% | |
| ! | AAGCGATGGGTTTACGTACC+GGG | - | chr4.2:6373511-6373530 | MS.gene93202:intron | 50.0% |
| ! | AGTGATTGGTTGCTGTGGTG+AGG | - | chr4.2:6374445-6374464 | MS.gene93202:CDS | 50.0% |
| ! | ATATGTTGGCTGGGGTAGGA+TGG | - | chr4.2:6374727-6374746 | MS.gene93202:intron | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr4.2:6375333-6375352 | MS.gene93202:CDS | 50.0% |
| ! | GAAACGAACAAAGGCGCACT+TGG | + | chr4.2:6373846-6373865 | None:intergenic | 50.0% |
| ! | GAAGCGATGGGTTTACGTAC+CGG | - | chr4.2:6373510-6373529 | MS.gene93202:intron | 50.0% |
| ! | GAGTTGGTCCAAGTGTAGAC+TGG | + | chr4.2:6375810-6375829 | None:intergenic | 50.0% |
| ! | TGGCAGTTGGCATTGCTGTT+GGG | - | chr4.2:6374051-6374070 | MS.gene93202:intron | 50.0% |
| ! | TTTGATGGATGAGGAGGACG+AGG | - | chr4.2:6373737-6373756 | MS.gene93202:intron | 50.0% |
| !! | GAAGAGGTTGATGCAGTTCC+TGG | - | chr4.2:6374104-6374123 | MS.gene93202:intron | 50.0% |
| !! | GGGTCATAGTGGACTATGCT+CGG | - | chr4.2:6374162-6374181 | MS.gene93202:intron | 50.0% |
| !!! | GTTTTTGAGGCTTCTTCGCG+CGG | - | chr4.2:6373660-6373679 | MS.gene93202:intron | 50.0% |
| !!! | TGGGGTTCTGGATGCTGTTT+TGG | - | chr4.2:6373590-6373609 | MS.gene93202:intron | 50.0% |
| AAGCCTCCCTGCACTCTTCT+CGG | + | chr4.2:6376065-6376084 | None:intergenic | 55.0% | |
| AGCTTCAGTTGCAATGGGGG+AGG | - | chr4.2:6374851-6374870 | MS.gene93202:CDS | 55.0% | |
| CTGACATCCGACAACCCCAA+GGG | - | chr4.2:6374530-6374549 | MS.gene93202:CDS | 55.0% | |
| GCGAGCTTCAGTTGCAATGG+GGG | - | chr4.2:6374848-6374867 | MS.gene93202:CDS | 55.0% | |
| GTCTCTACAGTTGCGCGCAA+AGG | + | chr4.2:6375866-6375885 | None:intergenic | 55.0% | |
| GTGGCAGTTGGCATTGCTGT+TGG | - | chr4.2:6374050-6374069 | MS.gene93202:intron | 55.0% | |
| GTTGCTGTGGTGAGGACGAA+AGG | - | chr4.2:6374453-6374472 | MS.gene93202:CDS | 55.0% | |
| TCAGTTGCAATGGGGGAGGA+GGG | - | chr4.2:6374855-6374874 | MS.gene93202:CDS | 55.0% | |
| TGCATGGTGCAGGTGATTGC+TGG | - | chr4.2:6375985-6376004 | MS.gene93202:CDS | 55.0% | |
| TGCTGTGGTGAGGACGAAAG+GGG | - | chr4.2:6374455-6374474 | MS.gene93202:CDS | 55.0% | |
| TTCAGTTGCAATGGGGGAGG+AGG | - | chr4.2:6374854-6374873 | MS.gene93202:CDS | 55.0% | |
| ! | CGATGACCGAGAAGAGTGCA+GGG | - | chr4.2:6376056-6376075 | MS.gene93202:CDS | 55.0% |
| ! | GACGATATGTTGGCTGGGGT+AGG | - | chr4.2:6374723-6374742 | MS.gene93202:intron | 55.0% |
| ! | GGCAGTTGGCATTGCTGTTG+GGG | - | chr4.2:6374052-6374071 | MS.gene93202:intron | 55.0% |
| ! | TCGATGACCGAGAAGAGTGC+AGG | - | chr4.2:6376055-6376074 | MS.gene93202:CDS | 55.0% |
| !! | AGGTTGATGCAGTTCCTGGG+AGG | - | chr4.2:6374108-6374127 | MS.gene93202:intron | 55.0% |
| !! | CAAGGATGGTGGATCCTGAG+CGG | - | chr4.2:6373793-6373812 | MS.gene93202:intron | 55.0% |
| GCTGACATCCGACAACCCCA+AGG | - | chr4.2:6374529-6374548 | MS.gene93202:CDS | 60.0% | |
| GCTGTGGTGAGGACGAAAGG+GGG | - | chr4.2:6374456-6374475 | MS.gene93202:CDS | 60.0% | |
| GGATGAGGAGGACGAGGAAG+AGG | - | chr4.2:6373743-6373762 | MS.gene93202:intron | 60.0% | |
| GGGGTTGTCGGATGTCAGCA+TGG | + | chr4.2:6374528-6374547 | None:intergenic | 60.0% | |
| TGAGGCTTCTTCGCGCGGAT+TGG | - | chr4.2:6373665-6373684 | MS.gene93202:intron | 60.0% | |
| ! | CATTGCTGTTGGGGCACCCT+TGG | - | chr4.2:6374061-6374080 | MS.gene93202:intron | 60.0% |
| ! | TGACCGAGAAGAGTGCAGGG+AGG | - | chr4.2:6376059-6376078 | MS.gene93202:CDS | 60.0% |
| ! | TGGTGGATCCTGAGCGGCAT+AGG | - | chr4.2:6373799-6373818 | MS.gene93202:intron | 60.0% |
| !! | TCTTCGCGCGGATTGGCTCA+GGG | - | chr4.2:6373672-6373691 | MS.gene93202:intron | 60.0% |
| !! | TTCTTCGCGCGGATTGGCTC+AGG | - | chr4.2:6373671-6373690 | MS.gene93202:intron | 60.0% |
| ! | TGCTGTTGGGGCACCCTTGG+AGG | - | chr4.2:6374064-6374083 | MS.gene93202:intron | 65.0% |
| !! | CTTCGCGCGGATTGGCTCAG+GGG | - | chr4.2:6373673-6373692 | MS.gene93202:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 6373007 | 6376315 | 6373007 | ID=MS.gene93202 |
| chr4.2 | mRNA | 6373007 | 6376315 | 6373007 | ID=MS.gene93202.t1;Parent=MS.gene93202 |
| chr4.2 | exon | 6375071 | 6376315 | 6375071 | ID=MS.gene93202.t1.exon1;Parent=MS.gene93202.t1 |
| chr4.2 | CDS | 6375071 | 6376315 | 6375071 | ID=cds.MS.gene93202.t1;Parent=MS.gene93202.t1 |
| chr4.2 | exon | 6374759 | 6374875 | 6374759 | ID=MS.gene93202.t1.exon2;Parent=MS.gene93202.t1 |
| chr4.2 | CDS | 6374759 | 6374875 | 6374759 | ID=cds.MS.gene93202.t1;Parent=MS.gene93202.t1 |
| chr4.2 | exon | 6374435 | 6374610 | 6374435 | ID=MS.gene93202.t1.exon3;Parent=MS.gene93202.t1 |
| chr4.2 | CDS | 6374435 | 6374610 | 6374435 | ID=cds.MS.gene93202.t1;Parent=MS.gene93202.t1 |
| chr4.2 | exon | 6373180 | 6373325 | 6373180 | ID=MS.gene93202.t1.exon4;Parent=MS.gene93202.t1 |
| chr4.2 | CDS | 6373180 | 6373325 | 6373180 | ID=cds.MS.gene93202.t1;Parent=MS.gene93202.t1 |
| chr4.2 | exon | 6373007 | 6373025 | 6373007 | ID=MS.gene93202.t1.exon5;Parent=MS.gene93202.t1 |
| chr4.2 | CDS | 6373007 | 6373025 | 6373007 | ID=cds.MS.gene93202.t1;Parent=MS.gene93202.t1 |
| Gene Sequence |
| Protein sequence |
