Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72130.t1 | XP_024628991.1 | 99.3 | 566 | 4 | 0 | 1 | 566 | 194 | 759 | 0.00E+00 | 1106.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72130.t1 | F4I3P9 | 80.2 | 562 | 99 | 4 | 12 | 566 | 216 | 772 | 2.2e-259 | 896.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72130.t1 | A0A396GQN9 | 99.3 | 566 | 4 | 0 | 1 | 566 | 194 | 759 | 0.0e+00 | 1106.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049230 | MS.gene72130 | 0.814519 | 1.48E-51 | -1.69E-46 |
| MS.gene049293 | MS.gene72130 | -0.804994 | 1.65E-49 | -1.69E-46 |
| MS.gene049297 | MS.gene72130 | 0.88245 | 1.03E-70 | -1.69E-46 |
| MS.gene049322 | MS.gene72130 | 0.828183 | 1.04E-54 | -1.69E-46 |
| MS.gene049378 | MS.gene72130 | 0.848873 | 4.64E-60 | -1.69E-46 |
| MS.gene049758 | MS.gene72130 | 0.805364 | 1.38E-49 | -1.69E-46 |
| MS.gene04987 | MS.gene72130 | 0.824858 | 6.43E-54 | -1.69E-46 |
| MS.gene04988 | MS.gene72130 | 0.815838 | 7.53E-52 | -1.69E-46 |
| MS.gene050226 | MS.gene72130 | 0.858732 | 6.73E-63 | -1.69E-46 |
| MS.gene050227 | MS.gene72130 | 0.872011 | 4.41E-67 | -1.69E-46 |
| MS.gene050228 | MS.gene72130 | 0.871552 | 6.27E-67 | -1.69E-46 |
| MS.gene050277 | MS.gene72130 | 0.801404 | 9.15E-49 | -1.69E-46 |
| MS.gene050303 | MS.gene72130 | 0.837843 | 4.09E-57 | -1.69E-46 |
| MS.gene050330 | MS.gene72130 | -0.826132 | 3.21E-54 | -1.69E-46 |
| MS.gene050623 | MS.gene72130 | -0.888561 | 5.29E-73 | -1.69E-46 |
| MS.gene050642 | MS.gene72130 | 0.916502 | 1.65E-85 | -1.69E-46 |
| MS.gene050987 | MS.gene72130 | 0.805882 | 1.08E-49 | -1.69E-46 |
| MS.gene051240 | MS.gene72130 | 0.80642 | 8.30E-50 | -1.69E-46 |
| MS.gene051257 | MS.gene72130 | 0.819739 | 9.92E-53 | -1.69E-46 |
| MS.gene051349 | MS.gene72130 | 0.801118 | 1.05E-48 | -1.69E-46 |
| MS.gene051451 | MS.gene72130 | 0.800419 | 1.45E-48 | -1.69E-46 |
| MS.gene051633 | MS.gene72130 | 0.816908 | 4.34E-52 | -1.69E-46 |
| MS.gene051662 | MS.gene72130 | 0.842915 | 1.93E-58 | -1.69E-46 |
| MS.gene051663 | MS.gene72130 | 0.818798 | 1.62E-52 | -1.69E-46 |
| MS.gene051983 | MS.gene72130 | 0.876837 | 1.02E-68 | -1.69E-46 |
| MS.gene052077 | MS.gene72130 | 0.802536 | 5.35E-49 | -1.69E-46 |
| MS.gene052176 | MS.gene72130 | 0.895092 | 1.33E-75 | -1.69E-46 |
| MS.gene052286 | MS.gene72130 | 0.803456 | 3.46E-49 | -1.69E-46 |
| MS.gene052302 | MS.gene72130 | 0.86036 | 2.18E-63 | -1.69E-46 |
| MS.gene052309 | MS.gene72130 | -0.872084 | 4.17E-67 | -1.69E-46 |
| MS.gene052376 | MS.gene72130 | 0.867907 | 9.68E-66 | -1.69E-46 |
| MS.gene052389 | MS.gene72130 | 0.827683 | 1.37E-54 | -1.69E-46 |
| MS.gene052600 | MS.gene72130 | 0.914383 | 2.05E-84 | -1.69E-46 |
| MS.gene052856 | MS.gene72130 | 0.814788 | 1.29E-51 | -1.69E-46 |
| MS.gene052858 | MS.gene72130 | 0.82321 | 1.57E-53 | -1.69E-46 |
| MS.gene052860 | MS.gene72130 | 0.822168 | 2.74E-53 | -1.69E-46 |
| MS.gene053080 | MS.gene72130 | 0.816572 | 5.16E-52 | -1.69E-46 |
| MS.gene053188 | MS.gene72130 | 0.818091 | 2.35E-52 | -1.69E-46 |
| MS.gene053216 | MS.gene72130 | 0.806837 | 6.78E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene72130 | 0.83264 | 8.42E-56 | -1.69E-46 |
| MS.gene053907 | MS.gene72130 | 0.805625 | 1.22E-49 | -1.69E-46 |
| MS.gene054537 | MS.gene72130 | 0.828507 | 8.65E-55 | -1.69E-46 |
| MS.gene054701 | MS.gene72130 | 0.822882 | 1.87E-53 | -1.69E-46 |
| MS.gene054930 | MS.gene72130 | 0.832429 | 9.50E-56 | -1.69E-46 |
| MS.gene054942 | MS.gene72130 | 0.886304 | 3.84E-72 | -1.69E-46 |
| MS.gene055441 | MS.gene72130 | 0.808313 | 3.29E-50 | -1.69E-46 |
| MS.gene056087 | MS.gene72130 | 0.811771 | 5.93E-51 | -1.69E-46 |
| MS.gene056403 | MS.gene72130 | 0.806019 | 1.01E-49 | -1.69E-46 |
| MS.gene056506 | MS.gene72130 | 0.802494 | 5.46E-49 | -1.69E-46 |
| MS.gene056552 | MS.gene72130 | 0.801695 | 7.97E-49 | -1.69E-46 |
| MS.gene056605 | MS.gene72130 | 0.809211 | 2.12E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene72130 | 0.870413 | 1.49E-66 | -1.69E-46 |
| MS.gene057079 | MS.gene72130 | 0.834271 | 3.30E-56 | -1.69E-46 |
| MS.gene057121 | MS.gene72130 | 0.809293 | 2.03E-50 | -1.69E-46 |
| MS.gene057555 | MS.gene72130 | 0.814937 | 1.19E-51 | -1.69E-46 |
| MS.gene057967 | MS.gene72130 | 0.812045 | 5.17E-51 | -1.69E-46 |
| MS.gene058142 | MS.gene72130 | 0.841147 | 5.67E-58 | -1.69E-46 |
| MS.gene058200 | MS.gene72130 | 0.814399 | 1.57E-51 | -1.69E-46 |
| MS.gene058201 | MS.gene72130 | 0.825274 | 5.13E-54 | -1.69E-46 |
| MS.gene058238 | MS.gene72130 | 0.818505 | 1.89E-52 | -1.69E-46 |
| MS.gene058399 | MS.gene72130 | 0.819516 | 1.12E-52 | -1.69E-46 |
| MS.gene058749 | MS.gene72130 | 0.832188 | 1.09E-55 | -1.69E-46 |
| MS.gene058833 | MS.gene72130 | 0.855587 | 5.71E-62 | -1.69E-46 |
| MS.gene059247 | MS.gene72130 | 0.833272 | 5.87E-56 | -1.69E-46 |
| MS.gene059569 | MS.gene72130 | 0.812514 | 4.08E-51 | -1.69E-46 |
| MS.gene05984 | MS.gene72130 | 0.815943 | 7.14E-52 | -1.69E-46 |
| MS.gene059894 | MS.gene72130 | 0.804148 | 2.48E-49 | -1.69E-46 |
| MS.gene059899 | MS.gene72130 | 0.813663 | 2.28E-51 | -1.69E-46 |
| MS.gene060084 | MS.gene72130 | 0.803757 | 2.99E-49 | -1.69E-46 |
| MS.gene060165 | MS.gene72130 | 0.815853 | 7.47E-52 | -1.69E-46 |
| MS.gene060297 | MS.gene72130 | 0.868113 | 8.31E-66 | -1.69E-46 |
| MS.gene060619 | MS.gene72130 | 0.81607 | 6.68E-52 | -1.69E-46 |
| MS.gene060879 | MS.gene72130 | 0.806928 | 6.48E-50 | -1.69E-46 |
| MS.gene061040 | MS.gene72130 | -0.826666 | 2.39E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 142 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGAATTCAACATGATTCT+AGG | 0.209520 | 4.2:-6351774 | MS.gene72130:CDS |
| AATCAGTTGGATTCGTCTTA+TGG | 0.216741 | 4.2:-6351400 | MS.gene72130:CDS |
| TGGGGTTCTGGATGCTGTTT+TGG | 0.247514 | 4.2:-6351380 | MS.gene72130:CDS |
| CTTCTATTTGATATGTTTCA+TGG | 0.262320 | 4.2:+6348956 | None:intergenic |
| CATTGCTGTTGGGGCACCCT+TGG | 0.269688 | 4.2:-6350909 | MS.gene72130:CDS |
| GATGAGTTTAGCTGAGCTTT+TGG | 0.274198 | 4.2:-6351851 | MS.gene72130:CDS |
| GAAGAGGTTGATGCAGTTCC+TGG | 0.277253 | 4.2:-6350866 | MS.gene72130:CDS |
| CTGTTGCTATCTTTGTCATC+AGG | 0.281451 | 4.2:+6350483 | None:intergenic |
| AATTTGGAAGTTGAAATTAA+TGG | 0.284196 | 4.2:-6351793 | MS.gene72130:CDS |
| TGTTTCGGTTTACGGGAATT+TGG | 0.293661 | 4.2:-6351809 | MS.gene72130:CDS |
| TCAAATAGAAGGTGAGAAAA+AGG | 0.297061 | 4.2:-6348944 | MS.gene72130:CDS |
| TGGCAGTTGGCATTGCTGTT+GGG | 0.297200 | 4.2:-6350919 | MS.gene72130:CDS |
| ATTGATATTGAAGATACTTT+AGG | 0.316478 | 4.2:-6351637 | MS.gene72130:CDS |
| ATGCAAGAGTATCTGAAATA+TGG | 0.320054 | 4.2:-6350217 | MS.gene72130:CDS |
| TGCGCCTTTGTTCGTTTCAA+TGG | 0.326884 | 4.2:-6351122 | MS.gene72130:CDS |
| GTGGTTCCTGTTTCGGTTTA+CGG | 0.327895 | 4.2:-6351817 | MS.gene72130:CDS |
| TACTTTAGGTTGTAAGGCTT+TGG | 0.331424 | 4.2:-6351623 | MS.gene72130:CDS |
| GATTCTAGGCTTGTTACTTC+TGG | 0.335990 | 4.2:-6351760 | MS.gene72130:CDS |
| TAATACACCTGCTGGGATAC+TGG | 0.337449 | 4.2:-6350996 | MS.gene72130:CDS |
| TGAAGATACTTTAGGTTGTA+AGG | 0.337482 | 4.2:-6351629 | MS.gene72130:CDS |
| TGGTTCCTGTTTCGGTTTAC+GGG | 0.342723 | 4.2:-6351816 | MS.gene72130:CDS |
| GCGCCTTTGTTCGTTTCAAT+GGG | 0.352036 | 4.2:-6351121 | MS.gene72130:CDS |
| GAGTAAAGTGGTTCCTGTTT+CGG | 0.355296 | 4.2:-6351824 | MS.gene72130:CDS |
| ATGGCTCTTATTGGGATAAC+GGG | 0.357306 | 4.2:-6351529 | MS.gene72130:CDS |
| ATCAGTTGGATTCGTCTTAT+GGG | 0.358561 | 4.2:-6351399 | MS.gene72130:CDS |
| GGATTCGTCTTATGGGGTTC+TGG | 0.360276 | 4.2:-6351392 | MS.gene72130:CDS |
| TTCTTCGCGCGGATTGGCTC+AGG | 0.360852 | 4.2:-6351299 | MS.gene72130:CDS |
| TTGACGAGGAACAAGCATTT+GGG | 0.363745 | 4.2:-6350829 | MS.gene72130:CDS |
| ATTGGGATAACGGGGACTTA+TGG | 0.366671 | 4.2:-6351520 | MS.gene72130:CDS |
| ATTGACGAGGAACAAGCATT+TGG | 0.368221 | 4.2:-6350830 | MS.gene72130:CDS |
| GCTAAACTCATCTTAAACTT+AGG | 0.371166 | 4.2:+6351862 | None:intergenic |
| CCCTTGGAGGATATTGTTAG+AGG | 0.378411 | 4.2:-6350893 | MS.gene72130:CDS |
| GTGGCAGTTGGCATTGCTGT+TGG | 0.380126 | 4.2:-6350920 | MS.gene72130:CDS |
| TGAGGCTTCTTCGCGCGGAT+TGG | 0.380295 | 4.2:-6351305 | MS.gene72130:CDS |
| AAGCCTCCCTGCACTCTTCT+CGG | 0.384444 | 4.2:+6348908 | None:intergenic |
| ATGGCTAAGATGCTTCATAA+TGG | 0.390726 | 4.2:-6351346 | MS.gene72130:CDS |
| ATCTTCACCCTTGGGGTTGT+CGG | 0.392594 | 4.2:+6350433 | None:intergenic |
| TGCTGTTGGGGCACCCTTGG+AGG | 0.395991 | 4.2:-6350906 | MS.gene72130:CDS |
| CATGAAACATATCAAATAGA+AGG | 0.403779 | 4.2:-6348955 | MS.gene72130:CDS |
| ATCTAAATCAAAGGAAGATT+CGG | 0.408810 | 4.2:+6351927 | None:intergenic |
| AATGTCACAACAGGAACTTC+AGG | 0.413089 | 4.2:+6351094 | None:intergenic |
| AAATTCCCGTAAACCGAAAC+AGG | 0.415050 | 4.2:+6351811 | None:intergenic |
| CAAAGAGAGTTCAAACTTCA+AGG | 0.427492 | 4.2:+6351039 | None:intergenic |
| CAACCTCGCAGGATTATAAC+TGG | 0.428629 | 4.2:-6350740 | MS.gene72130:intron |
| GAAATTTCGTCCGGTTTACT+AGG | 0.429518 | 4.2:-6350974 | MS.gene72130:CDS |
| CTTTGGTATCAGTGGCTCTC+TGG | 0.432741 | 4.2:+6348669 | None:intergenic |
| GGATGAGGAGGACGAGGAAG+AGG | 0.435631 | 4.2:-6351227 | MS.gene72130:CDS |
| TCGATTGCTAGTTATGTTCA+TGG | 0.437145 | 4.2:-6351427 | MS.gene72130:CDS |
| ATACATGGATCTTCACCCTT+GGG | 0.437950 | 4.2:+6350425 | None:intergenic |
| TGTTGCTATCTTTGTCATCA+GGG | 0.440012 | 4.2:+6350484 | None:intergenic |
| TGCATGGTGCAGGTGATTGC+TGG | 0.441426 | 4.2:-6348985 | MS.gene72130:intron |
| GTGCGAGCTTCAGTTGCAAT+GGG | 0.443311 | 4.2:-6350124 | MS.gene72130:CDS |
| CATGGCTCTTATTGGGATAA+CGG | 0.454105 | 4.2:-6351530 | MS.gene72130:CDS |
| TTGTAAGGCTTTGGTTATTG+TGG | 0.454945 | 4.2:-6351614 | MS.gene72130:CDS |
| AATTTGTTTGTGTGTTGTGT+TGG | 0.460206 | 4.2:-6351736 | MS.gene72130:CDS |
| ATTCTTGCTGCTGTGGCAGT+TGG | 0.464613 | 4.2:-6350932 | MS.gene72130:CDS |
| TAAAAGTATGTATGAAGCGA+TGG | 0.466444 | 4.2:-6351473 | MS.gene72130:CDS |
| ACAACTTTCCTATGCCGCTC+AGG | 0.466784 | 4.2:+6351163 | None:intergenic |
| TCTTCGCGCGGATTGGCTCA+GGG | 0.472077 | 4.2:-6351298 | MS.gene72130:CDS |
| GAAACGAACAAAGGCGCACT+TGG | 0.476109 | 4.2:+6351127 | None:intergenic |
| GGCAGTTGGCATTGCTGTTG+GGG | 0.477281 | 4.2:-6350918 | MS.gene72130:CDS |
| TTGCTGTGGTGAGGACGAAA+GGG | 0.479403 | 4.2:-6350516 | MS.gene72130:CDS |
| CGATTGCTAGTTATGTTCAT+GGG | 0.481862 | 4.2:-6351426 | MS.gene72130:CDS |
| TACTATCCTCCTCTTTCAAA+TGG | 0.483577 | 4.2:-6350184 | MS.gene72130:CDS |
| TCCAACGCAAATGTCACAAC+AGG | 0.486132 | 4.2:+6351085 | None:intergenic |
| TCGATGACCGAGAAGAGTGC+AGG | 0.490095 | 4.2:-6348915 | MS.gene72130:CDS |
| TGGTGGATCCTGAGCGGCAT+AGG | 0.495152 | 4.2:-6351171 | MS.gene72130:CDS |
| CTCCTCTTTCAAATGGTCAC+AGG | 0.497529 | 4.2:-6350177 | MS.gene72130:CDS |
| GTTGCTGTGGTGAGGACGAA+AGG | 0.503031 | 4.2:-6350517 | MS.gene72130:CDS |
| AAGCGATGGGTTTACGTACC+GGG | 0.504543 | 4.2:-6351459 | MS.gene72130:CDS |
| TTTGTTTGAGACACAGGTGT+TGG | 0.506074 | 4.2:-6351020 | MS.gene72130:CDS |
| AGTAATCTAGACAAGGCATC+AGG | 0.506209 | 4.2:+6350782 | None:intergenic |
| CCCTCTAACAATATCCTCCA+AGG | 0.511090 | 4.2:+6350892 | None:intergenic |
| TTTCGTCCGGTTTACTAGGA+AGG | 0.513445 | 4.2:-6350970 | MS.gene72130:CDS |
| CATACATGGATCTTCACCCT+TGG | 0.516195 | 4.2:+6350424 | None:intergenic |
| TGTTCATGGGGATAATCAGT+TGG | 0.516920 | 4.2:-6351413 | MS.gene72130:CDS |
| ATTGTGCCTTCCTAGTAAAC+CGG | 0.517946 | 4.2:+6350964 | None:intergenic |
| GTGTTGGTTAATACACCTGC+TGG | 0.525818 | 4.2:-6351004 | MS.gene72130:CDS |
| TGTGCGAGCTTCAGTTGCAA+TGG | 0.526133 | 4.2:-6350125 | MS.gene72130:CDS |
| GGGATACTGGAAATTTCGTC+CGG | 0.527829 | 4.2:-6350983 | MS.gene72130:CDS |
| ACTCTCTTTGTTTGAGACAC+AGG | 0.527870 | 4.2:-6351026 | MS.gene72130:CDS |
| GTTGACGAGCTTCATCAAGC+TGG | 0.530037 | 4.2:-6348877 | MS.gene72130:CDS |
| AACATTTGACATTACCGCCA+TGG | 0.539836 | 4.2:+6348835 | None:intergenic |
| ATGTCACAACAGGAACTTCA+GGG | 0.545053 | 4.2:+6351095 | None:intergenic |
| ATATGTTGGCTGGGGTAGGA+TGG | 0.546203 | 4.2:-6350243 | MS.gene72130:CDS |
| AAGAGGTTGATGCAGTTCCT+GGG | 0.546388 | 4.2:-6350865 | MS.gene72130:CDS |
| GGGTCATAGTGGACTATGCT+CGG | 0.551938 | 4.2:-6350808 | MS.gene72130:CDS |
| CTTCGCGCGGATTGGCTCAG+GGG | 0.552284 | 4.2:-6351297 | MS.gene72130:CDS |
| AAAAGTATGTATGAAGCGAT+GGG | 0.554179 | 4.2:-6351472 | MS.gene72130:CDS |
| TACGAATTTGATGGATGAGG+AGG | 0.554797 | 4.2:-6351239 | MS.gene72130:CDS |
| GAAGCGATGGGTTTACGTAC+CGG | 0.555215 | 4.2:-6351460 | MS.gene72130:CDS |
| TCCTGTTGTGACATTTGCGT+TGG | 0.555371 | 4.2:-6351086 | MS.gene72130:CDS |
| CCTTGGAGGATATTGTTAGA+GGG | 0.557443 | 4.2:-6350892 | MS.gene72130:CDS |
| ACTATCAAAATCTAAATCAA+AGG | 0.561397 | 4.2:+6351918 | None:intergenic |
| TAAGAGAGCTTCAACCTCGC+AGG | 0.561657 | 4.2:-6350751 | MS.gene72130:CDS |
| TCAATTAACTCACACCTCCC+AGG | 0.561944 | 4.2:+6350848 | None:intergenic |
| CAGCTACCCTCCTAATGTCA+TGG | 0.562556 | 4.2:+6350146 | None:intergenic |
| ACAAGCATTTGGGGTCATAG+TGG | 0.564472 | 4.2:-6350819 | MS.gene72130:CDS |
| TCAGTTGGATTCGTCTTATG+GGG | 0.564527 | 4.2:-6351398 | MS.gene72130:CDS |
| TTTGAAGTGATTGGTTGCTG+TGG | 0.568006 | 4.2:-6350530 | MS.gene72130:intron |
| AAATGCTGTTCTTGCTACGT+TGG | 0.568754 | 4.2:-6351584 | MS.gene72130:CDS |
| TAGATACAAGTGAATTTCCA+TGG | 0.572678 | 4.2:-6348852 | MS.gene72130:CDS |
| GTGCAGGTGATTGCTGGTAA+AGG | 0.573284 | 4.2:-6348979 | MS.gene72130:intron |
| GTTGCTATCTTTGTCATCAG+GGG | 0.577328 | 4.2:+6350485 | None:intergenic |
| TTACAACATTCTTGCTGCTG+TGG | 0.577487 | 4.2:-6350939 | MS.gene72130:CDS |
| GGAAGAGGATAGAGATGCGA+AGG | 0.577527 | 4.2:-6351212 | MS.gene72130:CDS |
| TATTGTTAGAGGGATTGAAG+AGG | 0.584456 | 4.2:-6350882 | MS.gene72130:CDS |
| CGATGACCGAGAAGAGTGCA+GGG | 0.586317 | 4.2:-6348914 | MS.gene72130:CDS |
| AAAGAGAGTTCAAACTTCAA+GGG | 0.587138 | 4.2:+6351040 | None:intergenic |
| GACGATATGTTGGCTGGGGT+AGG | 0.590280 | 4.2:-6350247 | MS.gene72130:CDS |
| TTTGATGGATGAGGAGGACG+AGG | 0.591487 | 4.2:-6351233 | MS.gene72130:CDS |
| AGCCTGTGACCATTTGAAAG+AGG | 0.592989 | 4.2:+6350175 | None:intergenic |
| GGGGTTGTCGGATGTCAGCA+TGG | 0.593109 | 4.2:+6350445 | None:intergenic |
| CGCCTTTGTTCGTTTCAATG+GGG | 0.598646 | 4.2:-6351120 | MS.gene72130:CDS |
| GCGAGCTTCAGTTGCAATGG+GGG | 0.600223 | 4.2:-6350122 | MS.gene72130:CDS |
| TTGAGTGAGGCTGATAAGAG+AGG | 0.600487 | 4.2:-6351688 | MS.gene72130:CDS |
| GAAATTTCCAGTATCCCAGC+AGG | 0.601448 | 4.2:+6350989 | None:intergenic |
| TACATGGATCTTCACCCTTG+GGG | 0.602061 | 4.2:+6350426 | None:intergenic |
| TGACGAGGAACAAGCATTTG+GGG | 0.607098 | 4.2:-6350828 | MS.gene72130:CDS |
| CTCCCCATTGAAACGAACAA+AGG | 0.607522 | 4.2:+6351118 | None:intergenic |
| TTTGGACGATATGTTGGCTG+GGG | 0.620608 | 4.2:-6350251 | MS.gene72130:CDS |
| AGCAATCGAGTTAAACATCC+CGG | 0.622878 | 4.2:+6351441 | None:intergenic |
| CTGTGACCATTTGAAAGAGG+AGG | 0.627307 | 4.2:+6350178 | None:intergenic |
| AGTGATTGGTTGCTGTGGTG+AGG | 0.627564 | 4.2:-6350525 | MS.gene72130:CDS |
| CCTCTAACAATATCCTCCAA+GGG | 0.631799 | 4.2:+6350893 | None:intergenic |
| TGCGAGCTTCAGTTGCAATG+GGG | 0.637029 | 4.2:-6350123 | MS.gene72130:CDS |
| GCTGTGGTGAGGACGAAAGG+GGG | 0.640166 | 4.2:-6350514 | MS.gene72130:CDS |
| TCATAATGGAACTGAATCTG+TGG | 0.641742 | 4.2:-6351332 | MS.gene72130:CDS |
| GATTGCTAGTTATGTTCATG+GGG | 0.647011 | 4.2:-6351425 | MS.gene72130:CDS |
| TGTTGGTTAATACACCTGCT+GGG | 0.653292 | 4.2:-6351003 | MS.gene72130:CDS |
| TGCTGTGGTGAGGACGAAAG+GGG | 0.660888 | 4.2:-6350515 | MS.gene72130:CDS |
| GGCTCAGGGGAAATATGATG+AGG | 0.665665 | 4.2:-6351284 | MS.gene72130:CDS |
| CAAGGATGGTGGATCCTGAG+CGG | 0.668101 | 4.2:-6351177 | MS.gene72130:CDS |
| GCTGACATCCGACAACCCCA+AGG | 0.672170 | 4.2:-6350441 | MS.gene72130:CDS |
| CTGACATCCGACAACCCCAA+GGG | 0.697527 | 4.2:-6350440 | MS.gene72130:CDS |
| AGAATCAAGTAATCTAGACA+AGG | 0.699983 | 4.2:+6350775 | None:intergenic |
| AGGTTGATGCAGTTCCTGGG+AGG | 0.713356 | 4.2:-6350862 | MS.gene72130:CDS |
| TGGCTCTTATTGGGATAACG+GGG | 0.726754 | 4.2:-6351528 | MS.gene72130:CDS |
| ATACCAGTTATAATCCTGCG+AGG | 0.748233 | 4.2:+6350737 | None:intergenic |
| TGACCGAGAAGAGTGCAGGG+AGG | 0.749733 | 4.2:-6348911 | MS.gene72130:CDS |
| GAGGTGTGAGTTAATTGACG+AGG | 0.756211 | 4.2:-6350843 | MS.gene72130:CDS |
| ATACAAGTGAATTTCCATGG+CGG | 0.800600 | 4.2:-6348849 | MS.gene72130:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAGATGAGT+TGG | + | chr4.2:6351496-6351515 | None:intergenic | 15.0% |
| !! | ACAAAATTCTGAATATTTAT+AGG | - | chr4.2:6350876-6350895 | MS.gene72130:CDS | 15.0% |
| !! | ATGAAATTCTGAATATTTAT+AGG | + | chr4.2:6350716-6350735 | None:intergenic | 15.0% |
| !! | CAAAATTCTGAATATTTATA+GGG | - | chr4.2:6350877-6350896 | MS.gene72130:CDS | 15.0% |
| !! | TGAAATTCTGAATATTTATA+GGG | + | chr4.2:6350715-6350734 | None:intergenic | 15.0% |
| !!! | AAAGTGTAATTTTATTTTGT+AGG | - | chr4.2:6350845-6350864 | MS.gene72130:CDS | 15.0% |
| !!! | AACTCATCTTTTTTTTTTTT+TGG | - | chr4.2:6351495-6351514 | MS.gene72130:CDS | 15.0% |
| !!! | AAGTGTAATTTTATTTTGTA+GGG | - | chr4.2:6350846-6350865 | MS.gene72130:CDS | 15.0% |
| !!! | ACTCATCTTTTTTTTTTTTT+GGG | - | chr4.2:6351496-6351515 | MS.gene72130:CDS | 15.0% |
| !!! | ATTTAGATTTTGATAGTTTA+GGG | - | chr4.2:6348728-6348747 | MS.gene72130:intron | 15.0% |
| !! | AACAAACATAGAATAACTAT+TGG | - | chr4.2:6351166-6351185 | MS.gene72130:CDS | 20.0% |
| !! | AATAGGGTTAATTAAGTAAA+TGG | - | chr4.2:6350688-6350707 | MS.gene72130:intron | 20.0% |
| !! | AATTTGGAAGTTGAAATTAA+TGG | - | chr4.2:6348847-6348866 | MS.gene72130:intron | 20.0% |
| !! | ACTATCAAAATCTAAATCAA+AGG | + | chr4.2:6348725-6348744 | None:intergenic | 20.0% |
| !! | ATTAAATCTTACTTAGTGAA+TGG | - | chr4.2:6351401-6351420 | MS.gene72130:CDS | 20.0% |
| !! | ATTGATATTGAAGATACTTT+AGG | - | chr4.2:6349003-6349022 | MS.gene72130:intron | 20.0% |
| !! | CAAAATATTAATATGCAAGA+AGG | - | chr4.2:6351583-6351602 | MS.gene72130:CDS | 20.0% |
| !! | GCATAATTAATTATATCGTT+TGG | - | chr4.2:6350038-6350057 | MS.gene72130:intron | 20.0% |
| !! | GTTTGATGCATTTAAATTTA+AGG | + | chr4.2:6351149-6351168 | None:intergenic | 20.0% |
| !!! | AAGAAGGAATTGTTTATTTT+TGG | - | chr4.2:6351599-6351618 | MS.gene72130:CDS | 20.0% |
| !!! | ACTTTTTACTTTTTATTCAG+TGG | - | chr4.2:6350362-6350381 | MS.gene72130:intron | 20.0% |
| !!! | ATATTTTCCTTTAGCATTTT+AGG | + | chr4.2:6350813-6350832 | None:intergenic | 20.0% |
| !!! | CTTCTTGCATATTAATATTT+TGG | + | chr4.2:6351585-6351604 | None:intergenic | 20.0% |
| !!! | GATTTAGATTTTGATAGTTT+AGG | - | chr4.2:6348727-6348746 | MS.gene72130:intron | 20.0% |
| !!! | GTAAAAAGTATGAAAGAATT+AGG | + | chr4.2:6350351-6350370 | None:intergenic | 20.0% |
| !!! | TATTTTCCTTTAGCATTTTA+GGG | + | chr4.2:6350812-6350831 | None:intergenic | 20.0% |
| !!! | TTGCTTAATTTAAACCATTT+TGG | - | chr4.2:6350635-6350654 | MS.gene72130:intron | 20.0% |
| !!! | TTTTACGTCAACATTTTTTT+TGG | - | chr4.2:6350785-6350804 | MS.gene72130:CDS | 20.0% |
| !!! | TTTTTATTCAGTGGATATTT+TGG | - | chr4.2:6350371-6350390 | MS.gene72130:intron | 20.0% |
| !!! | TTTTTGGGTTACTAATTATA+AGG | - | chr4.2:6349991-6350010 | MS.gene72130:intron | 20.0% |
| ! | AATTATTATTCGTATTCACG+TGG | - | chr4.2:6351197-6351216 | MS.gene72130:CDS | 25.0% |
| ! | ACACATCTTAATATTGTTCA+AGG | + | chr4.2:6350921-6350940 | None:intergenic | 25.0% |
| ! | AGTTAAGACATTGTGAAATT+TGG | + | chr4.2:6350312-6350331 | None:intergenic | 25.0% |
| ! | AGTTCAAAACAAAATTGAGA+AGG | + | chr4.2:6349962-6349981 | None:intergenic | 25.0% |
| ! | ATACGAATAATAATTGTGGA+TGG | + | chr4.2:6351192-6351211 | None:intergenic | 25.0% |
| ! | ATCTAAATCAAAGGAAGATT+CGG | + | chr4.2:6348716-6348735 | None:intergenic | 25.0% |
| ! | ATTAGGATTCCAACATTTAA+GGG | + | chr4.2:6351318-6351337 | None:intergenic | 25.0% |
| ! | CACATCTTAATATTGTTCAA+GGG | + | chr4.2:6350920-6350939 | None:intergenic | 25.0% |
| ! | CATGAAACATATCAAATAGA+AGG | - | chr4.2:6351685-6351704 | MS.gene72130:CDS | 25.0% |
| ! | CTTCAAAAGAAGAAAAAAGA+CGG | + | chr4.2:6350097-6350116 | None:intergenic | 25.0% |
| ! | CTTCTATTTGATATGTTTCA+TGG | + | chr4.2:6351687-6351706 | None:intergenic | 25.0% |
| ! | GTGAATACGAATAATAATTG+TGG | + | chr4.2:6351196-6351215 | None:intergenic | 25.0% |
| ! | GTTAAGACATTGTGAAATTT+GGG | + | chr4.2:6350311-6350330 | None:intergenic | 25.0% |
| ! | TCAAAGTGATATTTCAACTA+AGG | - | chr4.2:6350942-6350961 | MS.gene72130:CDS | 25.0% |
| ! | TCAAGGGTTAATTAAGTAAA+TGG | + | chr4.2:6350904-6350923 | None:intergenic | 25.0% |
| ! | TCACTAAGTAAGATTTAATG+AGG | + | chr4.2:6351400-6351419 | None:intergenic | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | + | chr4.2:6351054-6351073 | None:intergenic | 25.0% |
| ! | TGTATTTCTCTTAATTGATG+TGG | - | chr4.2:6349929-6349948 | MS.gene72130:intron | 25.0% |
| !! | GTTGACGTAAAATTTTTACA+GGG | + | chr4.2:6350777-6350796 | None:intergenic | 25.0% |
| !! | TGTTGACGTAAAATTTTTAC+AGG | + | chr4.2:6350778-6350797 | None:intergenic | 25.0% |
| !! | TTCCATTGCTACTTAATTTA+GGG | + | chr4.2:6351085-6351104 | None:intergenic | 25.0% |
| !! | TTTCCATTGCTACTTAATTT+AGG | + | chr4.2:6351086-6351105 | None:intergenic | 25.0% |
| !!! | ATTTAAACCATTTTGGTTCT+TGG | - | chr4.2:6350642-6350661 | MS.gene72130:intron | 25.0% |
| !!! | TCTCAATTTTGTTTTGAACT+TGG | - | chr4.2:6349962-6349981 | MS.gene72130:intron | 25.0% |
| !!! | TGAACTTGGAGAAATTTTTT+GGG | - | chr4.2:6349976-6349995 | MS.gene72130:intron | 25.0% |
| !!! | TGTTGTTGCAACTTATTTTA+GGG | + | chr4.2:6350973-6350992 | None:intergenic | 25.0% |
| !!! | TTGAACTTGGAGAAATTTTT+TGG | - | chr4.2:6349975-6349994 | MS.gene72130:intron | 25.0% |
| !!! | TTGTTGTTGCAACTTATTTT+AGG | + | chr4.2:6350974-6350993 | None:intergenic | 25.0% |
| !!! | TTTTCTTCTTTTGAAGTGAT+TGG | - | chr4.2:6350101-6350120 | MS.gene72130:intron | 25.0% |
| !!! | TTTTGTTGTCTTTTTATGAC+TGG | - | chr4.2:6351834-6351853 | MS.gene72130:CDS | 25.0% |
| !!! | TTTTTTTTTGGGTATGAACT+TGG | - | chr4.2:6351507-6351526 | MS.gene72130:CDS | 25.0% |
| AAAAGAAGAAAAAAGACGGT+CGG | + | chr4.2:6350093-6350112 | None:intergenic | 30.0% | |
| AAAGAGAGTTCAAACTTCAA+GGG | + | chr4.2:6349603-6349622 | None:intergenic | 30.0% | |
| ACTAATCCCCTTAATCATTT+CGG | - | chr4.2:6351554-6351573 | MS.gene72130:CDS | 30.0% | |
| AGAAATACCAAGAACCAAAA+TGG | + | chr4.2:6350652-6350671 | None:intergenic | 30.0% | |
| AGAATCAAGTAATCTAGACA+AGG | + | chr4.2:6349868-6349887 | None:intergenic | 30.0% | |
| ATGCTAAAGGAAAATATCAC+AGG | - | chr4.2:6350816-6350835 | MS.gene72130:CDS | 30.0% | |
| ATGGAATTCAACATGATTCT+AGG | - | chr4.2:6348866-6348885 | MS.gene72130:CDS | 30.0% | |
| CCAATGTCAAAATACATACA+TGG | + | chr4.2:6350233-6350252 | None:intergenic | 30.0% | |
| CTTAATTTAGGGAAATGTGA+TGG | + | chr4.2:6351074-6351093 | None:intergenic | 30.0% | |
| GATCTTATGAAGTTACAACT+TGG | - | chr4.2:6351264-6351283 | MS.gene72130:CDS | 30.0% | |
| GATTAGGATTCCAACATTTA+AGG | + | chr4.2:6351319-6351338 | None:intergenic | 30.0% | |
| GCTAAACTCATCTTAAACTT+AGG | + | chr4.2:6348781-6348800 | None:intergenic | 30.0% | |
| TAAGTATCCTTCGAAAAACA+TGG | - | chr4.2:6349092-6349111 | MS.gene72130:intron | 30.0% | |
| TAGATACAAGTGAATTTCCA+TGG | - | chr4.2:6351788-6351807 | MS.gene72130:CDS | 30.0% | |
| TCAAATAGAAGGTGAGAAAA+AGG | - | chr4.2:6351696-6351715 | MS.gene72130:CDS | 30.0% | |
| TGCTAAAGGAAAATATCACA+GGG | - | chr4.2:6350817-6350836 | MS.gene72130:CDS | 30.0% | |
| TTAATGAGGAAAAAATCGAC+AGG | + | chr4.2:6351386-6351405 | None:intergenic | 30.0% | |
| TTAGGATTCCAACATTTAAG+GGG | + | chr4.2:6351317-6351336 | None:intergenic | 30.0% | |
| TTCAAAGCTGTTGACAAATT+TGG | - | chr4.2:6351118-6351137 | MS.gene72130:CDS | 30.0% | |
| TTCCCTAAATTAAGTAGCAA+TGG | - | chr4.2:6351080-6351099 | MS.gene72130:CDS | 30.0% | |
| TTCGTATATTGCTCTTAACA+AGG | + | chr4.2:6350270-6350289 | None:intergenic | 30.0% | |
| TTTCTCTTAATTGATGTGGA+AGG | - | chr4.2:6349933-6349952 | MS.gene72130:intron | 30.0% | |
| ! | AAAAGTATGTATGAAGCGAT+GGG | - | chr4.2:6349168-6349187 | MS.gene72130:intron | 30.0% |
| ! | AATTTGTTTGTGTGTTGTGT+TGG | - | chr4.2:6348904-6348923 | MS.gene72130:CDS | 30.0% |
| ! | ATGCTGACGAAAATTTTTAC+AGG | + | chr4.2:6350747-6350766 | None:intergenic | 30.0% |
| ! | GGAATGTGATTTGTCAATAA+GGG | - | chr4.2:6351620-6351639 | MS.gene72130:CDS | 30.0% |
| ! | TAAAAGTATGTATGAAGCGA+TGG | - | chr4.2:6349167-6349186 | MS.gene72130:intron | 30.0% |
| ! | TGCTGACGAAAATTTTTACA+GGG | + | chr4.2:6350746-6350765 | None:intergenic | 30.0% |
| ! | TGGAATGTGATTTGTCAATA+AGG | - | chr4.2:6351619-6351638 | MS.gene72130:CDS | 30.0% |
| !! | AGGATTAGTTAAAGCTTCAT+AGG | + | chr4.2:6351366-6351385 | None:intergenic | 30.0% |
| !! | ATGCAAGAGTATCTGAAATA+TGG | - | chr4.2:6350423-6350442 | MS.gene72130:intron | 30.0% |
| !! | TGAAGATACTTTAGGTTGTA+AGG | - | chr4.2:6349011-6349030 | MS.gene72130:intron | 30.0% |
| !! | TTTGTCAACAGCTTTGAATA+TGG | + | chr4.2:6351116-6351135 | None:intergenic | 30.0% |
| !! | TTTTACGAATTTGATGGATG+AGG | - | chr4.2:6349398-6349417 | MS.gene72130:intron | 30.0% |
| !!! | CCATGTATGTATTTTGACAT+TGG | - | chr4.2:6350230-6350249 | MS.gene72130:CDS | 30.0% |
| !!! | TGCTGTTTTTACGAATTTGA+TGG | - | chr4.2:6349392-6349411 | MS.gene72130:intron | 30.0% |
| !!! | TGTTTTGGTTCAGAATTTGA+TGG | - | chr4.2:6349275-6349294 | MS.gene72130:intron | 30.0% |
| AATCAGTTGGATTCGTCTTA+TGG | - | chr4.2:6349240-6349259 | MS.gene72130:intron | 35.0% | |
| ATACAAGTGAATTTCCATGG+CGG | - | chr4.2:6351791-6351810 | MS.gene72130:CDS | 35.0% | |
| ATCAGTTGGATTCGTCTTAT+GGG | - | chr4.2:6349241-6349260 | MS.gene72130:intron | 35.0% | |
| ATGGCTAAGATGCTTCATAA+TGG | - | chr4.2:6349294-6349313 | MS.gene72130:intron | 35.0% | |
| CAAAGAGAGTTCAAACTTCA+AGG | + | chr4.2:6349604-6349623 | None:intergenic | 35.0% | |
| CGAAAAACATGGCTCTTATT+GGG | - | chr4.2:6349103-6349122 | MS.gene72130:intron | 35.0% | |
| CGATTGCTAGTTATGTTCAT+GGG | - | chr4.2:6349214-6349233 | MS.gene72130:intron | 35.0% | |
| CTACTTAAACGAGACAGATT+AGG | + | chr4.2:6351335-6351354 | None:intergenic | 35.0% | |
| GATTGCTAGTTATGTTCATG+GGG | - | chr4.2:6349215-6349234 | MS.gene72130:intron | 35.0% | |
| GGTGATTCCGAAATGATTAA+GGG | + | chr4.2:6351564-6351583 | None:intergenic | 35.0% | |
| GTGATTCCGAAATGATTAAG+GGG | + | chr4.2:6351563-6351582 | None:intergenic | 35.0% | |
| TACTATCCTCCTCTTTCAAA+TGG | - | chr4.2:6350456-6350475 | MS.gene72130:CDS | 35.0% | |
| TATTGTTAGAGGGATTGAAG+AGG | - | chr4.2:6349758-6349777 | MS.gene72130:intron | 35.0% | |
| TCACAATGTCTTAACTAGCA+GGG | - | chr4.2:6350316-6350335 | MS.gene72130:intron | 35.0% | |
| TCGAAAAACATGGCTCTTAT+TGG | - | chr4.2:6349102-6349121 | MS.gene72130:intron | 35.0% | |
| TCGATTGCTAGTTATGTTCA+TGG | - | chr4.2:6349213-6349232 | MS.gene72130:intron | 35.0% | |
| TCTCTTGCATTTATTGTTGC+AGG | - | chr4.2:6351945-6351964 | MS.gene72130:CDS | 35.0% | |
| TGGTGATTCCGAAATGATTA+AGG | + | chr4.2:6351565-6351584 | None:intergenic | 35.0% | |
| TGTGGAAAAGCTGAACAATA+GGG | - | chr4.2:6350672-6350691 | MS.gene72130:intron | 35.0% | |
| TGTGTTGGAAGAAAAAACGA+TGG | - | chr4.2:6348919-6348938 | MS.gene72130:CDS | 35.0% | |
| TGTTGCTATCTTTGTCATCA+GGG | + | chr4.2:6350159-6350178 | None:intergenic | 35.0% | |
| TTAAAGCTTCATAGGAAGCA+AGG | + | chr4.2:6351358-6351377 | None:intergenic | 35.0% | |
| TTCACAATGTCTTAACTAGC+AGG | - | chr4.2:6350315-6350334 | MS.gene72130:intron | 35.0% | |
| TTGTGGAAAAGCTGAACAAT+AGG | - | chr4.2:6350671-6350690 | MS.gene72130:intron | 35.0% | |
| TTTGGTCCCTAAAATGCTAA+AGG | - | chr4.2:6350803-6350822 | MS.gene72130:CDS | 35.0% | |
| ! | AACTGAATCTGTGGTTTTTG+AGG | - | chr4.2:6349317-6349336 | MS.gene72130:intron | 35.0% |
| ! | TCATAATGGAACTGAATCTG+TGG | - | chr4.2:6349308-6349327 | MS.gene72130:intron | 35.0% |
| ! | TTGGTTCTTGGTATTTCTTG+TGG | - | chr4.2:6350654-6350673 | MS.gene72130:intron | 35.0% |
| ! | TTGTAAGGCTTTGGTTATTG+TGG | - | chr4.2:6349026-6349045 | MS.gene72130:intron | 35.0% |
| ! | TTGTCTTTTTATGACTGGCA+TGG | - | chr4.2:6351839-6351858 | MS.gene72130:CDS | 35.0% |
| ! | TTTTCTCCATGACATTAGGA+GGG | - | chr4.2:6350488-6350507 | MS.gene72130:CDS | 35.0% |
| ! | TTTTTCTCCATGACATTAGG+AGG | - | chr4.2:6350487-6350506 | MS.gene72130:CDS | 35.0% |
| !! | ATAAGAGCCATGTTTTTCGA+AGG | + | chr4.2:6349102-6349121 | None:intergenic | 35.0% |
| !! | GGATATTTTGGACGATATGT+TGG | - | chr4.2:6350383-6350402 | MS.gene72130:intron | 35.0% |
| !! | TACTTTAGGTTGTAAGGCTT+TGG | - | chr4.2:6349017-6349036 | MS.gene72130:intron | 35.0% |
| !!! | TGGACATATGTTTTTGAGTG+AGG | - | chr4.2:6348939-6348958 | MS.gene72130:CDS | 35.0% |
| AAATGCTGTTCTTGCTACGT+TGG | - | chr4.2:6349056-6349075 | MS.gene72130:intron | 40.0% | |
| AAATTCCCGTAAACCGAAAC+AGG | + | chr4.2:6348832-6348851 | None:intergenic | 40.0% | |
| AACATTTGACATTACCGCCA+TGG | + | chr4.2:6351808-6351827 | None:intergenic | 40.0% | |
| AATGTCACAACAGGAACTTC+AGG | + | chr4.2:6349549-6349568 | None:intergenic | 40.0% | |
| AGCAATCGAGTTAAACATCC+CGG | + | chr4.2:6349202-6349221 | None:intergenic | 40.0% | |
| ATACATGGATCTTCACCCTT+GGG | + | chr4.2:6350218-6350237 | None:intergenic | 40.0% | |
| ATACCAGTTATAATCCTGCG+AGG | + | chr4.2:6349906-6349925 | None:intergenic | 40.0% | |
| ATGGCTCTTATTGGGATAAC+GGG | - | chr4.2:6349111-6349130 | MS.gene72130:intron | 40.0% | |
| ATGTCACAACAGGAACTTCA+GGG | + | chr4.2:6349548-6349567 | None:intergenic | 40.0% | |
| ATTGACGAGGAACAAGCATT+TGG | - | chr4.2:6349810-6349829 | MS.gene72130:intron | 40.0% | |
| ATTGTGCCTTCCTAGTAAAC+CGG | + | chr4.2:6349679-6349698 | None:intergenic | 40.0% | |
| CATGGCTCTTATTGGGATAA+CGG | - | chr4.2:6349110-6349129 | MS.gene72130:intron | 40.0% | |
| CCTCTAACAATATCCTCCAA+GGG | + | chr4.2:6349750-6349769 | None:intergenic | 40.0% | |
| CCTTGGAGGATATTGTTAGA+GGG | - | chr4.2:6349748-6349767 | MS.gene72130:intron | 40.0% | |
| CTGTTGCTATCTTTGTCATC+AGG | + | chr4.2:6350160-6350179 | None:intergenic | 40.0% | |
| GAAATTTCGTCCGGTTTACT+AGG | - | chr4.2:6349666-6349685 | MS.gene72130:intron | 40.0% | |
| GAGTAAAGTGGTTCCTGTTT+CGG | - | chr4.2:6348816-6348835 | MS.gene72130:intron | 40.0% | |
| GTTGCTATCTTTGTCATCAG+GGG | + | chr4.2:6350158-6350177 | None:intergenic | 40.0% | |
| TCAGTTGGATTCGTCTTATG+GGG | - | chr4.2:6349242-6349261 | MS.gene72130:intron | 40.0% | |
| TCATGCATGAAACTGAACGT+TGG | + | chr4.2:6351235-6351254 | None:intergenic | 40.0% | |
| TGTTCATGGGGATAATCAGT+TGG | - | chr4.2:6349227-6349246 | MS.gene72130:intron | 40.0% | |
| TGTTTCGGTTTACGGGAATT+TGG | - | chr4.2:6348831-6348850 | MS.gene72130:intron | 40.0% | |
| TTACAACATTCTTGCTGCTG+TGG | - | chr4.2:6349701-6349720 | MS.gene72130:intron | 40.0% | |
| TTGACGAGGAACAAGCATTT+GGG | - | chr4.2:6349811-6349830 | MS.gene72130:intron | 40.0% | |
| ! | ACTCTCTTTGTTTGAGACAC+AGG | - | chr4.2:6349614-6349633 | MS.gene72130:intron | 40.0% |
| ! | AGGGTACACTTTTATGTGCA+TGG | - | chr4.2:6351639-6351658 | MS.gene72130:CDS | 40.0% |
| ! | AGTAATCTAGACAAGGCATC+AGG | + | chr4.2:6349861-6349880 | None:intergenic | 40.0% |
| ! | ATTTTGGACGATATGTTGGC+TGG | - | chr4.2:6350387-6350406 | MS.gene72130:intron | 40.0% |
| ! | GATGAGTTTAGCTGAGCTTT+TGG | - | chr4.2:6348789-6348808 | MS.gene72130:intron | 40.0% |
| ! | GCTTTTGGATGAGAGTAAAG+TGG | - | chr4.2:6348804-6348823 | MS.gene72130:intron | 40.0% |
| ! | TACGAATTTGATGGATGAGG+AGG | - | chr4.2:6349401-6349420 | MS.gene72130:intron | 40.0% |
| ! | TCCAACATTTAAGGGGTACA+GGG | + | chr4.2:6351310-6351329 | None:intergenic | 40.0% |
| ! | TGTTGGTTAATACACCTGCT+GGG | - | chr4.2:6349637-6349656 | MS.gene72130:intron | 40.0% |
| ! | TTCCAACATTTAAGGGGTAC+AGG | + | chr4.2:6351311-6351330 | None:intergenic | 40.0% |
| ! | TTTGAAGTGATTGGTTGCTG+TGG | - | chr4.2:6350110-6350129 | MS.gene72130:CDS | 40.0% |
| ! | TTTGTTTGAGACACAGGTGT+TGG | - | chr4.2:6349620-6349639 | MS.gene72130:intron | 40.0% |
| !! | GATTCTAGGCTTGTTACTTC+TGG | - | chr4.2:6348880-6348899 | MS.gene72130:CDS | 40.0% |
| !! | GGCTTTTTCTCCATGACATT+AGG | - | chr4.2:6350484-6350503 | MS.gene72130:CDS | 40.0% |
| !! | TAAGCTGTTTTCAAGGATGG+TGG | - | chr4.2:6349452-6349471 | MS.gene72130:intron | 40.0% |
| !! | TTTTGGACGATATGTTGGCT+GGG | - | chr4.2:6350388-6350407 | MS.gene72130:intron | 40.0% |
| ACAGGGAAGTCAGCTTATCA+TGG | + | chr4.2:6351293-6351312 | None:intergenic | 45.0% | |
| AGCCTGTGACCATTTGAAAG+AGG | + | chr4.2:6350468-6350487 | None:intergenic | 45.0% | |
| CAACCTCGCAGGATTATAAC+TGG | - | chr4.2:6349900-6349919 | MS.gene72130:intron | 45.0% | |
| CATACATGGATCTTCACCCT+TGG | + | chr4.2:6350219-6350238 | None:intergenic | 45.0% | |
| CCCTCTAACAATATCCTCCA+AGG | + | chr4.2:6349751-6349770 | None:intergenic | 45.0% | |
| CCCTTGGAGGATATTGTTAG+AGG | - | chr4.2:6349747-6349766 | MS.gene72130:intron | 45.0% | |
| CGCCTTTGTTCGTTTCAATG+GGG | - | chr4.2:6349520-6349539 | MS.gene72130:intron | 45.0% | |
| CTCCCCATTGAAACGAACAA+AGG | + | chr4.2:6349525-6349544 | None:intergenic | 45.0% | |
| CTCCTCTTTCAAATGGTCAC+AGG | - | chr4.2:6350463-6350482 | MS.gene72130:CDS | 45.0% | |
| CTGTGACCATTTGAAAGAGG+AGG | + | chr4.2:6350465-6350484 | None:intergenic | 45.0% | |
| GAAATTTCCAGTATCCCAGC+AGG | + | chr4.2:6349654-6349673 | None:intergenic | 45.0% | |
| GAGGTGTGAGTTAATTGACG+AGG | - | chr4.2:6349797-6349816 | MS.gene72130:intron | 45.0% | |
| GCGCCTTTGTTCGTTTCAAT+GGG | - | chr4.2:6349519-6349538 | MS.gene72130:intron | 45.0% | |
| GGGATACTGGAAATTTCGTC+CGG | - | chr4.2:6349657-6349676 | MS.gene72130:intron | 45.0% | |
| GTGGTTCCTGTTTCGGTTTA+CGG | - | chr4.2:6348823-6348842 | MS.gene72130:intron | 45.0% | |
| TAATACACCTGCTGGGATAC+TGG | - | chr4.2:6349644-6349663 | MS.gene72130:intron | 45.0% | |
| TACATGGATCTTCACCCTTG+GGG | + | chr4.2:6350217-6350236 | None:intergenic | 45.0% | |
| TCAATTAACTCACACCTCCC+AGG | + | chr4.2:6349795-6349814 | None:intergenic | 45.0% | |
| TCCAACGCAAATGTCACAAC+AGG | + | chr4.2:6349558-6349577 | None:intergenic | 45.0% | |
| TCCCTGTACCCCTTAAATGT+TGG | - | chr4.2:6351306-6351325 | MS.gene72130:CDS | 45.0% | |
| TCCTGTTGTGACATTTGCGT+TGG | - | chr4.2:6349554-6349573 | MS.gene72130:intron | 45.0% | |
| TGACGAGGAACAAGCATTTG+GGG | - | chr4.2:6349812-6349831 | MS.gene72130:intron | 45.0% | |
| TGCATGAAACTGAACGTTGG+TGG | + | chr4.2:6351232-6351251 | None:intergenic | 45.0% | |
| TGCGCCTTTGTTCGTTTCAA+TGG | - | chr4.2:6349518-6349537 | MS.gene72130:intron | 45.0% | |
| TGGCTCTTATTGGGATAACG+GGG | - | chr4.2:6349112-6349131 | MS.gene72130:intron | 45.0% | |
| TGGTTCCTGTTTCGGTTTAC+GGG | - | chr4.2:6348824-6348843 | MS.gene72130:intron | 45.0% | |
| TTGAGTGAGGCTGATAAGAG+AGG | - | chr4.2:6348952-6348971 | MS.gene72130:CDS | 45.0% | |
| TTTCGTCCGGTTTACTAGGA+AGG | - | chr4.2:6349670-6349689 | MS.gene72130:intron | 45.0% | |
| TTTGACTGCCAGTCTACACT+TGG | - | chr4.2:6351469-6351488 | MS.gene72130:CDS | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr4.2:6351005-6351024 | MS.gene72130:CDS | 45.0% |
| ! | ACAAGCATTTGGGGTCATAG+TGG | - | chr4.2:6349821-6349840 | MS.gene72130:intron | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr4.2:6351004-6351023 | MS.gene72130:CDS | 45.0% |
| ! | CACTTTTATGTGCATGGTGC+AGG | - | chr4.2:6351645-6351664 | MS.gene72130:CDS | 45.0% |
| ! | TTTGGACGATATGTTGGCTG+GGG | - | chr4.2:6350389-6350408 | MS.gene72130:intron | 45.0% |
| !! | AAGAGGTTGATGCAGTTCCT+GGG | - | chr4.2:6349775-6349794 | MS.gene72130:intron | 45.0% |
| !! | ATTGGGATAACGGGGACTTA+TGG | - | chr4.2:6349120-6349139 | MS.gene72130:intron | 45.0% |
| !! | CGAAGGCTAAGCTGTTTTCA+AGG | - | chr4.2:6349445-6349464 | MS.gene72130:intron | 45.0% |
| !! | GGCTAAGCTGTTTTCAAGGA+TGG | - | chr4.2:6349449-6349468 | MS.gene72130:intron | 45.0% |
| !! | GTGTTGGTTAATACACCTGC+TGG | - | chr4.2:6349636-6349655 | MS.gene72130:intron | 45.0% |
| ACAACTTTCCTATGCCGCTC+AGG | + | chr4.2:6349480-6349499 | None:intergenic | 50.0% | |
| ACTAAGTGGGGTCAGCTTCA+TGG | - | chr4.2:6351017-6351036 | MS.gene72130:CDS | 50.0% | |
| ATCTTCACCCTTGGGGTTGT+CGG | + | chr4.2:6350210-6350229 | None:intergenic | 50.0% | |
| ATGAAGCTGACCCCACTTAG+TGG | + | chr4.2:6351018-6351037 | None:intergenic | 50.0% | |
| ATTCTTGCTGCTGTGGCAGT+TGG | - | chr4.2:6349708-6349727 | MS.gene72130:intron | 50.0% | |
| CAGCTACCCTCCTAATGTCA+TGG | + | chr4.2:6350497-6350516 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr4.2:6351006-6351025 | None:intergenic | 50.0% | |
| GGAAGAGGATAGAGATGCGA+AGG | - | chr4.2:6349428-6349447 | MS.gene72130:intron | 50.0% | |
| GGATTCGTCTTATGGGGTTC+TGG | - | chr4.2:6349248-6349267 | MS.gene72130:intron | 50.0% | |
| GGCTCAGGGGAAATATGATG+AGG | - | chr4.2:6349356-6349375 | MS.gene72130:intron | 50.0% | |
| GTGCAGGTGATTGCTGGTAA+AGG | - | chr4.2:6351661-6351680 | MS.gene72130:CDS | 50.0% | |
| GTGCGAGCTTCAGTTGCAAT+GGG | - | chr4.2:6350516-6350535 | MS.gene72130:CDS | 50.0% | |
| GTTGACGAGCTTCATCAAGC+TGG | - | chr4.2:6351763-6351782 | MS.gene72130:CDS | 50.0% | |
| TAAGAGAGCTTCAACCTCGC+AGG | - | chr4.2:6349889-6349908 | MS.gene72130:intron | 50.0% | |
| TGAAGCTGACCCCACTTAGT+GGG | + | chr4.2:6351017-6351036 | None:intergenic | 50.0% | |
| TGACCCCACTTAGTGGGATA+AGG | + | chr4.2:6351011-6351030 | None:intergenic | 50.0% | |
| TGCGAGCTTCAGTTGCAATG+GGG | - | chr4.2:6350517-6350536 | MS.gene72130:CDS | 50.0% | |
| TGTGCGAGCTTCAGTTGCAA+TGG | - | chr4.2:6350515-6350534 | MS.gene72130:CDS | 50.0% | |
| TTGCTGTGGTGAGGACGAAA+GGG | - | chr4.2:6350124-6350143 | MS.gene72130:CDS | 50.0% | |
| ! | AAGCGATGGGTTTACGTACC+GGG | - | chr4.2:6349181-6349200 | MS.gene72130:intron | 50.0% |
| ! | AGTGATTGGTTGCTGTGGTG+AGG | - | chr4.2:6350115-6350134 | MS.gene72130:CDS | 50.0% |
| ! | ATATGTTGGCTGGGGTAGGA+TGG | - | chr4.2:6350397-6350416 | MS.gene72130:intron | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr4.2:6351003-6351022 | MS.gene72130:CDS | 50.0% |
| ! | GAAACGAACAAAGGCGCACT+TGG | + | chr4.2:6349516-6349535 | None:intergenic | 50.0% |
| ! | GAAGCGATGGGTTTACGTAC+CGG | - | chr4.2:6349180-6349199 | MS.gene72130:intron | 50.0% |
| ! | GAGTTGGTCCAAGTGTAGAC+TGG | + | chr4.2:6351480-6351499 | None:intergenic | 50.0% |
| ! | TGGCAGTTGGCATTGCTGTT+GGG | - | chr4.2:6349721-6349740 | MS.gene72130:intron | 50.0% |
| ! | TTTGATGGATGAGGAGGACG+AGG | - | chr4.2:6349407-6349426 | MS.gene72130:intron | 50.0% |
| !! | GAAGAGGTTGATGCAGTTCC+TGG | - | chr4.2:6349774-6349793 | MS.gene72130:intron | 50.0% |
| !! | GGGTCATAGTGGACTATGCT+CGG | - | chr4.2:6349832-6349851 | MS.gene72130:intron | 50.0% |
| !!! | GTTTTTGAGGCTTCTTCGCG+CGG | - | chr4.2:6349330-6349349 | MS.gene72130:intron | 50.0% |
| !!! | TGGGGTTCTGGATGCTGTTT+TGG | - | chr4.2:6349260-6349279 | MS.gene72130:intron | 50.0% |
| AAGCCTCCCTGCACTCTTCT+CGG | + | chr4.2:6351735-6351754 | None:intergenic | 55.0% | |
| AGCTTCAGTTGCAATGGGGG+AGG | - | chr4.2:6350521-6350540 | MS.gene72130:CDS | 55.0% | |
| CTGACATCCGACAACCCCAA+GGG | - | chr4.2:6350200-6350219 | MS.gene72130:CDS | 55.0% | |
| GCGAGCTTCAGTTGCAATGG+GGG | - | chr4.2:6350518-6350537 | MS.gene72130:CDS | 55.0% | |
| GTCTCTACAGTTGCGCGCAA+AGG | + | chr4.2:6351536-6351555 | None:intergenic | 55.0% | |
| GTGGCAGTTGGCATTGCTGT+TGG | - | chr4.2:6349720-6349739 | MS.gene72130:intron | 55.0% | |
| GTTGCTGTGGTGAGGACGAA+AGG | - | chr4.2:6350123-6350142 | MS.gene72130:CDS | 55.0% | |
| TCAGTTGCAATGGGGGAGGA+GGG | - | chr4.2:6350525-6350544 | MS.gene72130:CDS | 55.0% | |
| TGCATGGTGCAGGTGATTGC+TGG | - | chr4.2:6351655-6351674 | MS.gene72130:CDS | 55.0% | |
| TGCTGTGGTGAGGACGAAAG+GGG | - | chr4.2:6350125-6350144 | MS.gene72130:CDS | 55.0% | |
| TTCAGTTGCAATGGGGGAGG+AGG | - | chr4.2:6350524-6350543 | MS.gene72130:CDS | 55.0% | |
| ! | CGATGACCGAGAAGAGTGCA+GGG | - | chr4.2:6351726-6351745 | MS.gene72130:CDS | 55.0% |
| ! | GACGATATGTTGGCTGGGGT+AGG | - | chr4.2:6350393-6350412 | MS.gene72130:intron | 55.0% |
| ! | GGCAGTTGGCATTGCTGTTG+GGG | - | chr4.2:6349722-6349741 | MS.gene72130:intron | 55.0% |
| ! | TCGATGACCGAGAAGAGTGC+AGG | - | chr4.2:6351725-6351744 | MS.gene72130:CDS | 55.0% |
| !! | AGGTTGATGCAGTTCCTGGG+AGG | - | chr4.2:6349778-6349797 | MS.gene72130:intron | 55.0% |
| !! | CAAGGATGGTGGATCCTGAG+CGG | - | chr4.2:6349463-6349482 | MS.gene72130:intron | 55.0% |
| GCTGACATCCGACAACCCCA+AGG | - | chr4.2:6350199-6350218 | MS.gene72130:CDS | 60.0% | |
| GCTGTGGTGAGGACGAAAGG+GGG | - | chr4.2:6350126-6350145 | MS.gene72130:CDS | 60.0% | |
| GGATGAGGAGGACGAGGAAG+AGG | - | chr4.2:6349413-6349432 | MS.gene72130:intron | 60.0% | |
| GGGGTTGTCGGATGTCAGCA+TGG | + | chr4.2:6350198-6350217 | None:intergenic | 60.0% | |
| TGAGGCTTCTTCGCGCGGAT+TGG | - | chr4.2:6349335-6349354 | MS.gene72130:intron | 60.0% | |
| ! | CATTGCTGTTGGGGCACCCT+TGG | - | chr4.2:6349731-6349750 | MS.gene72130:intron | 60.0% |
| ! | TGACCGAGAAGAGTGCAGGG+AGG | - | chr4.2:6351729-6351748 | MS.gene72130:CDS | 60.0% |
| ! | TGGTGGATCCTGAGCGGCAT+AGG | - | chr4.2:6349469-6349488 | MS.gene72130:intron | 60.0% |
| !! | TCTTCGCGCGGATTGGCTCA+GGG | - | chr4.2:6349342-6349361 | MS.gene72130:intron | 60.0% |
| !! | TTCTTCGCGCGGATTGGCTC+AGG | - | chr4.2:6349341-6349360 | MS.gene72130:intron | 60.0% |
| ! | TGCTGTTGGGGCACCCTTGG+AGG | - | chr4.2:6349734-6349753 | MS.gene72130:intron | 65.0% |
| !! | CTTCGCGCGGATTGGCTCAG+GGG | - | chr4.2:6349343-6349362 | MS.gene72130:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 6348677 | 6351985 | 6348677 | ID=MS.gene72130 |
| chr4.2 | mRNA | 6348677 | 6351985 | 6348677 | ID=MS.gene72130.t1;Parent=MS.gene72130 |
| chr4.2 | exon | 6350741 | 6351985 | 6350741 | ID=MS.gene72130.t1.exon1;Parent=MS.gene72130.t1 |
| chr4.2 | CDS | 6350741 | 6351985 | 6350741 | ID=cds.MS.gene72130.t1;Parent=MS.gene72130.t1 |
| chr4.2 | exon | 6350429 | 6350545 | 6350429 | ID=MS.gene72130.t1.exon2;Parent=MS.gene72130.t1 |
| chr4.2 | CDS | 6350429 | 6350545 | 6350429 | ID=cds.MS.gene72130.t1;Parent=MS.gene72130.t1 |
| chr4.2 | exon | 6350105 | 6350280 | 6350105 | ID=MS.gene72130.t1.exon3;Parent=MS.gene72130.t1 |
| chr4.2 | CDS | 6350105 | 6350280 | 6350105 | ID=cds.MS.gene72130.t1;Parent=MS.gene72130.t1 |
| chr4.2 | exon | 6348850 | 6348995 | 6348850 | ID=MS.gene72130.t1.exon4;Parent=MS.gene72130.t1 |
| chr4.2 | CDS | 6348850 | 6348995 | 6348850 | ID=cds.MS.gene72130.t1;Parent=MS.gene72130.t1 |
| chr4.2 | exon | 6348677 | 6348695 | 6348677 | ID=MS.gene72130.t1.exon5;Parent=MS.gene72130.t1 |
| chr4.2 | CDS | 6348677 | 6348695 | 6348677 | ID=cds.MS.gene72130.t1;Parent=MS.gene72130.t1 |
| Gene Sequence |
| Protein sequence |
